Template Description
3vkg: CRYSTAL STRUCTURE OF AN MOTOR PROTEIN Solved by: X-RAY, Resolution: 2.81A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
372-542
3vkgB
17%
374-541
3vkgA
17%
>target
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAA----------VLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY--GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3vkgA
EIDSLKETAWSAIIPAFDHAQNLIKIYLKGNAIITDLHSEAIKDRHWKILKKRLNTNWIITELTLGSIWDSDLARNENIYREVITAAQGEIALEEFLKGVREFWTTLELDLVNYQRKCKLVRGWDDLFNKLAEHLNSISAMKMSPYYKVFEEEANHWDDRLNKVRSLLDVWIDVQRRWVYLEGIFINQLLPAESTRFKSINSEFIAILKKVSGAPLILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDIIKIQKHFRKMFAGLANLTLDDEKTTIIGMSSAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALGGGTLQQSKIQEQLQSIEQTTQMILNNLADSVLQDLSAQKRKKFEHLITELVHQRDVVRQLQKCKNLTGNKDFDWLYHMRYYYDATQENVLHKLVIHMANATFYYGFEYLGIGERLVQTPLTDRCYLTLTQALESRMGGNPFGPAGTGKTETVKALGSQLGRFVLVFCCDEGFDLQAMSRIFVGLCQCGAWGCFDEFNRLEERILSAVSQQIQTIQVALKENSKEVELLNISLHQDMGIFVTMNPGYAGRSNLPDNLKKLFRSMAMIKPDREMIAQVMLYSQGFKTAEVLAGKIVPLFKLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCQPPDAESKTKADQIYCQYEIGVLLNSINDTMIPKLVADDIPLIQSLLLDVFPGSQLQPIQMDQLRKKIQEIAKQRHLVTKQEWVEKILQLHQILNINHGVMMVGPSGGGKTTSWEVYLEAIEQVDNIKSEAHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESTKRHWIIFDGDVDPEWVENLNSLLDDNKLLTLPNGERLALPNNVRVMFEVQDLKYATLATISRCGMVWFSEEILTTQMIFQNYLDTLSNEPFDPQEKEQQKRNENAIPAGLKVQKECAAIISQYFEPGGLVHKVLEDAGQRPHIMDFTRLRVLNSFFSLMNRSIVNVIEYNQLHSDFPMSPENQSNYITNRLLYSLMWGLGGSMGLVERENFSKFIQTIAITPVPANTIPLLDYSVSIDDANWSLWKNKVEVETHKVASPDVVIPTVDTTRHVDVLHAWLSEHRPLILCGPPGSGKTMTLTSTLRAFPDFEVVSLNF--SSATTPELLLKTFDHHCEYKRTPSGETVLRP--TQLGKWLVVFCDEINLPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIKLD-KIQFVGACNPPTDAGRV----------QLTHRFLRHAPILL--VDFPSTSSLTQIYGTFNRALMKLLPNLRSFADNLTDAMVEFYSESQKRFTPDIQAHYIYSPRELSRWDRALLEAIQTMDGCTLEGLVRLWAHEALRLFQDRLVETEEKEWTDKKIDEVALKHFPSVNLDALKRPILYSNWLTPVNRSDLREYVKARLKVFYPLVLFNEVLDHILRIDRVFRQPQGHALLIGVSGGGKSVLSRFVAWMNGLSIYTIKYKSSDFDDDLRMLLKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEVPGLFEGEEFTALMHACKETAQRNGLILDSEEELYKYFTSQVRRNLHVVFTMNPASPDFHNSPALFNRCVLDWFGEWSPEALFQVGSEFTRNLDLENPQYIAPPVFIQEAEILMAIPPSHRDAVVSSLVYIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMSTVVGDVVLASAFLAYIGFFDQNFRTDLMRKWMIRLDSVGIKFKSDLSVPSFLSKPEERLNWHANSLPSDELCIENAIMLKRFNRYPLVIDPSGQAMEFLMNQYADKKITKTSFMKNLESALRFGCPLLVQDVESFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHEALKTERPDTHKKRSDLLKIQGEFQVKLRILEKSLLNALSQASGNILDDDSVISTLETLKKETTEIALKVEETETVMQEISEVSALYNPMALSCSRVYFAMEELSQFHLYQFSLRAFLDIFYNLLNNNPNLVDKKDPNERLVYLSKDIFSMTFNRVTRTLLNDDKLTFALQLTIISVKGTSNEIEESEWDFLLKGGDNLTSIKETIPQLDSLLSTTQQKWLICLRQQVPSFSKLVDHIQQNSSDWKQFFGKDQVGEPIIPESWIVAQAQLSNQQSTIVSNFRKILLMKAFHSDRVLQYSHSFVCSVFGEDFLNTLDMANIVEKEVKSSSPLLLCSVPGYDASSKVDDLALQLHKQYKSFAIGSPEGFELAEKSIYAAAKSGTWVLLKNIHLAPQWLVQLEKKLHSLSPHPSFRLFMTSEIHPALPANLLRMSNVFSYENPPGVKANLLHTFIGIPATRMDKQPAERSRIYFLLAWFHAIIQERLRYIPLGWTKFFEFNDADLRGALDSIDYWVDLYSKGRSNIDPDKIPWIAVRTILGSTIYGGRIDNEFDMRLLYSFLEQLFTPSAFNPDFPLVPSIGLSVPEGTTRAHFMKWIEALPEISTPIWLGLPENAESLLLSNKARKMINDLQKMQSSEEDSSSSEDKGKAKPLFRCFEREISTGGKLVKKITNDLANLLKWYSVPETISLSVWISDFSKRMQQLSEISESVWLGGLLNPEAYITATRQSASQLNGRLHASASFNVKGMALEGAVWNNDQLTPTDILSTPISIATLTWKDPIFNNSSSKLSVPVYLNETRSELLFSIDLPYDQSTSKQNWYQRSVSISSWKSD
[Model]
374-405
3vkgB
31%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NIHICLMGDPGVAKSQLLSYIDRLAPRSQYTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3vkgB
LVNYQRKCKLVRGWDDLFNKLAEHLNSISHWDDRLNKVRSLLDVWIDVQRRWVYLEGIFSGSGDINQLLPAESTRFKSINSEFIAILKKVSGAPLILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDIIKIQKHFRKMFAGLANLTLDDEKTTIIGMSSAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALGGGTLQQSKIQEQLQSIEQTTQMILNNLADSVLQDLSAQKRKKFEHLITELVHQRDVVRQLQKCKNLTGNKDFDWLYHMRYYYDATQENVLHKLVIHMANATFYYGFEYLGIGERLVQTPLTDRCYLTLTQALESRMGGNPFGPAGTGKTETVKALGSQLGRFVLVFCCDEGFDLQAMSRIFVGLCQCGAWGCFDEFNRLEERILSAVSQQIQTIQVALKENSKEVNISLHQDMGIFVTMNPGYAGRSNLPDNLKKLFRSMAMIKPDREMIAQVMLYSQGFKTAEVLAGKIVPLFKLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCITDAESKTKADQIYCQYEIGVLLNSINDTMIPKLVADDIPLIQSLLLDVFPGLQPIQMDQLRKKIQEIAKQRHLVTKQEWVEKILQLHQILNINHGVMMVGPSGGGKTTSWEVYLEAIEQVDNIKSEAHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESTKRHWIIFDGDVDPEWVENLNSLLDDNKLLTLPNGERLALPNNVRVMFEVQDLKYATLATISRCGMVWFSEEILTTQMIFQNYLDTLSNEPFDPQEAGLKVQKECAAIISQYFEPGGLVHKVLEDAGQRPHIMDFTRLRVLNSFFSLMNRSIVNVIEYNQLHSDFPMSPENQSNYITNRLLYSLMWGLGGSMGLVERENFSKFIQTIAITPVPANTIPLLDYSVSIDDANWSLWKNKVEVETHKVASPDVVIPTVDTTRHVDVLHAWLSEHRPLILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTPELLLKTFDHHCEYKRTPSGETVLRPTQLGKWLVVFCDEINLPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIKLDKIQFVGACNPPTDAGRVQLTHRFLRHAPILLVDFPSTSSLTQIYGTFNRALMKLLPNLRSFADNLTDAMVEFYSESQKRFTPDIQAHYIYSPRELSRWDRALLEAIQTMDGCTLEGLVRLWAHEALRLFQDRLVETEEKEWTDKKIDEVALKHFPSVNLDALKRPILYSNWLTKDYQPVNRSDLREYVKARLKVFYEEELDVPLVLFNEVLDHILRIDRVFRQPQGHALLIGVSGGGKSVLSRFVAWMNGLSIYTIKVNNNYKSSDFDDDLRMLLKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEEGEEFTALMHACKETAQRSEEELYKYFTSQVRRNLHVVFTMNPASPDFHNRSATSPALFNRCVLDWFGEWSPEALFQVGSEFTRNLDLENPQYIAPPVFIQEAEIMMAIPPSHRDAVVSSLVYIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMSTVVGDVVLASAFLAYIGFFDQNFRTDLMRKWMIRLDSVGIKFKSDLSVPSFLSKPEERLNWHANSLPSDELCIENAIMLKRFNRYPLVIDPSGQAMEFLMNQYADKKITKTSFLDSSFMKNLESALRFGCPLLVQDVENIDPVLNPVLNKPSFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHEALKTERPDTHKKRSDLLKIQGEFQVKLRILEKSLLNALSQASGNILDDDSVISTLETLKKETTEIALKVEETETVMQEISEVSALYNPMALSCSRVYFAMEELSQFHLYQFSLRAFLDIFYNLLNNNPNLVDKKDPNERLVYLSKDIFSMTFNRVTRTLLNDDKLTFALQLTIISVKGTSNEIEESEWDFLLKGGDNLTSIKETIPQLDSLLSTTQQKWLICLRQQVPSFSKLVDHIQQNSSDWKQFFGKDQVGEPIIPESWIVAQAQLSNQQSTIVSNFRKILLMKAFHSDRVLQYSHSFVCSVFGEDFLNTQELDMANIVEKEVKSSSPLLLCSVPGYDASSKVDDLALQLHKQYKSFAIGSPEGFELAEKSIYAAAKSGTWVLLKNIHLAPQWLVQLEKKLHSLSPHPSFRLFMTSEIHPALPANLLRMSNVFSYENPPGVKANLLHTFIGIPATRMDKQPAERSRIYFLLAWFHAIIQERLRYIPLGWTKFFEFNDADLRGALDSIDYWVDLYSKGRSNIDPDKIPWIAVRTILGSTIYGGRIDNEFDMRLLYSFLEQLFTPSAFNPDFPLVPSIGLSVPEGTTRAHFMKWIEALPEISTPIWLGLPENAESLLLSNKARKMINDLQKMQSSESSSEDKGKAKLKRIKDPLFRCFEREISTGGKLVKKITNDLANLLELKSTNYLRSLTTSISKGIVPKEWKWYSVPETISLSVWISDFSKRMQQLSEISESQVWLGGLLNPEAYITATRQSASQLNGWENLRLHASSFNVKGMALEGAVWNNDQLTPTDILSTPISIATLTWKDKDKLSVPVYLNETRSELLFSIDLPYDQSTSKQNWYQRSVSISSWKSD
[Model]
375-404
3vkgA
33%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IHICLMGDPGVAKSQLLSYIDRLAPRSQYT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3vkgA
EIDSLKETAWSAIIPAFDHAQNLIKIYLKGNAIITDLHSEAIKDRHWKILKKRLNTNWIITELTLGSIWDSDLARNENIYREVITAAQGEIALEEFLKGVREFWTTLELDLVNYQRKCKLVRGWDDLFNKLAEHLNSISAMKMSPYYKVFEEEANHWDDRLNKVRSLLDVWIDVQRRWVYLEGIFINQLLPAESTRFKSINSEFIAILKKVSGAPLILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDIIKIQKHFRKMFAGLANLTLDDEKTTIIGMSSAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALGGGTLQQSKIQEQLQSIEQTTQMILNNLADSVLQDLSAQKRKKFEHLITELVHQRDVVRQLQKCKNLTGNKDFDWLYHMRYYYDATQENVLHKLVIHMANATFYYGFEYLGIGERLVQTPLTDRCYLTLTQALESRMGGNPFGPAGTGKTETVKALGSQLGRFVLVFCCDEGFDLQAMSRIFVGLCQCGAWGCFDEFNRLEERILSAVSQQIQTIQVALKENSKEVELLNISLHQDMGIFVTMNPGYAGRSNLPDNLKKLFRSMAMIKPDREMIAQVMLYSQGFKTAEVLAGKIVPLFKLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCQPPDAESKTKADQIYCQYEIGVLLNSINDTMIPKLVADDIPLIQSLLLDVFPGSQLQPIQMDQLRKKIQEIAKQRHLVTKQEWVEKILQLHQILNINHGVMMVGPSGGGKTTSWEVYLEAIEQVDNIKSEAHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESTKRHWIIFDGDVDPEWVENLNSLLDDNKLLTLPNGERLALPNNVRVMFEVQDLKYATLATISRCGMVWFSEEILTTQMIFQNYLDTLSNEPFDPQEKEQQKRNENAIPAGLKVQKECAAIISQYFEPGGLVHKVLEDAGQRPHIMDFTRLRVLNSFFSLMNRSIVNVIEYNQLHSDFPMSPENQSNYITNRLLYSLMWGLGGSMGLVERENFSKFIQTIAITPVPANTIPLLDYSVSIDDANWSLWKNKVEVETHKVASPDVVIPTVDTTRHVDVLHAWLSEHRPLILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTPELLLKTFDHHCEYKRTPSGETVLRPTQLGKWLVVFCDEINLPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIKLDKIQFVGACNPPTDAGRVQLTHRFLRHAPILLVDFPSTSSLTQIYGTFNRALMKLLPNLRSFADNLTDAMVEFYSESQKRFTPDIQAHYIYSPRELSRWDRALLEAIQTMDGCTLEGLVRLWAHEALRLFQDRLVETEEKEWTDKKIDEVALKHFPSVNLDALKRPILYSNWLTPVNRSDLREYVKARLKVFYPLVLFNEVLDHILRIDRVFRQPQGHALLIGVSGGGKSVLSRFVAWMNGLSIYTIKYKSSDFDDDLRMLLKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEVPGLFEGEEFTALMHACKETAQRNGLILDSEEELYKYFTSQVRRNLHVVFTMNPASPDFHNSPALFNRCVLDWFGEWSPEALFQVGSEFTRNLDLENPQYIAPPVFIQEAEILMAIPPSHRDAVVSSLVYIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMSTVVGDVVLASAFLAYIGFFDQNFRTDLMRKWMIRLDSVGIKFKSDLSVPSFLSKPEERLNWHANSLPSDELCIENAIMLKRFNRYPLVIDPSGQAMEFLMNQYADKKITKTSFMKNLESALRFGCPLLVQDVESFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHEALKTERPDTHKKRSDLLKIQGEFQVKLRILEKSLLNALSQASGNILDDDSVISTLETLKKETTEIALKVEETETVMQEISEVSALYNPMALSCSRVYFAMEELSQFHLYQFSLRAFLDIFYNLLNNNPNLVDKKDPNERLVYLSKDIFSMTFNRVTRTLLNDDKLTFALQLTIISVKGTSNEIEESEWDFLLKGGDNLTSIKETIPQLDSLLSTTQQKWLICLRQQVPSFSKLVDHIQQNSSDWKQFFGKDQVGEPIIPESWIVAQAQLSNQQSTIVSNFRKILLMKAFHSDRVLQYSHSFVCSVFGEDFLNTLDMANIVEKEVKSSSPLLLCSVPGYDASSKVDDLALQLHKQYKSFAIGSPEGFELAEKSIYAAAKSGTWVLLKNIHLAPQWLVQLEKKLHSLSPHPSFRLFMTSEIHPALPANLLRMSNVFSYENPPGVKANLLHTFIGIPATRMDKQPAERSRIYFLLAWFHAIIQERLRYIPLGWTKFFEFNDADLRGALDSIDYWVDLYSKGRSNIDPDKIPWIAVRTILGSTIYGGRIDNEFDMRLLYSFLEQLFTPSAFNPDFPLVPSIGLSVPEGTTRAHFMKWIEALPEISTPIWLGLPENAESLLLSNKARKMINDLQKMQSSEEDSSSSEDKGKAKPLFRCFEREISTGGKLVKKITNDLANLLKWYSVPETISLSVWISDFSKRMQQLSEISESVWLGGLLNPEAYITATRQSASQLNGRLHASASFNVKGMALEGAVWNNDQLTPTDILSTPISIATLTWKDPIFNNSSSKLSVPVYLNETRSELLFSIDLPYDQSTSKQNWYQRSVSISSWKSD
[Model]
4fdg: STRUCTURE OF REPLICATION FACTOR X Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
8-642
4fdgE
32%
>target
--IEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKMTKSDDDVSGAGELSSEELKQIAEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHE-RQPTVPESLADYITAAYVEMRREARA-SKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKD
>4fdgE
QIDYRDVFIEFLTTFKGNN----NQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPT-------------------------------------YQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPV-KRGSRAVFDIYMKVSSIEVSQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLEDTRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPG-EQDRELANYILDVHSGKS----TKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLE
[Model]
8-642
4fdgA
32%
>target
--IEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKMTKSDDDVSGAGELSSEELKQIAEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHE-RQPTVPESLADYITAAYVEMRREARA-SKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKD
>4fdgA
QIDYRDVFIEFLTTFKGNN----NQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPT-------------------------------------YQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPV-KRGSRAVFDIYMKVSSIEVSQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLEDTRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPG-EQDRELANYILDVHSGKS----TKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLE
[Model]
8-642
4fdgD
32%
>target
--IEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKMTKSDDDVSGAGELSSEELKQIAEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHE-RQPTVPESLADYITAAYVEMRREARA-SKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKD
>4fdgD
QIDYRDVFIEFLTTFKGNN----NQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPT-------------------------------------YQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPV-KRGSRAVFDIYMKVSSIEVSQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLEDTRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPG-EQDRELANYILDVHSGKS----TKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLE
[Model]
8-642
4fdgC
32%
>target
--IEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKMTKSDDDVSGAGELSSEELKQIAEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHE-RQPTVPESLADYITAAYVEMRREARA-SKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKD
>4fdgC
QIDYRDVFIEFLTTFKGNN----NQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPT-------------------------------------YQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPV-KRGSRAVFDIYMKVSSIEVSQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLEDTRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPG-EQDRELANYILDVHSGKS----TKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLE
[Model]
8-642
4fdgB
32%
>target
--IEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKMTKSDDDVSGAGELSSEELKQIAEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHE-RQPTVPESLADYITAAYVEMRREARA-SKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKD
>4fdgB
QIDYRDVFIEFLTTFKGNN----NQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPT-------------------------------------YQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPV-KRGSRAVFDIYMKVSSIEVSQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLEDTRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPG-EQDRELANYILDVHSGKS----TKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLE
[Model]
3vkh: CRYSTAL STRUCTURE OF AN MOTOR PROTEIN Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
372-541
3vkhA
17%
>target
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGNIHICLMGDPGVAKSQLLSY-IDRLAPRSQYTTGR---GSSGVGLT----AAVLRD-SVSGELTLEGGALVLADQGVCCIDEFDKMAEA------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY--GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3vkhA
NIYREVITAAQGEIALEEFLKGVREFWTTLELDLVNYQRKCKLVRGWDDLFNKLAEHLNSISAMKMSPYYKVFEEEANHWDDRLNKVRSLLDVWIDVQRRWVYLEGIFINQLLPAESTRFKSINSEFIAILKKVSGAPLILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDIIKIQKHFRKMFAGLANLTLDDEKTTIIGMSSAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALGGGTLQQSKIQEQLQSIEQTTQMILNNLADSVLQDLSAQKRKKFEHLITELVHQRDVVRQLQKCKNLTGNKDFDWLYHMRYYYDATQENVLHKLVIHMANATFYYGFEYLGIGERLVQTPLTDRCYLTLTQALESRMGGNPFGPAGTGKTETVKALGSQLGRFVLVFCCDEGFDLQAMSRIFVGLCQCGAWGCFDEFNRLEERILSAVSQQIQTIQVALKENSKEVELLNISLHQDMGIFVTMNPGYAGRSNLPDNLKKLFRSMAMIKPDREMIAQVMLYSQGFKTAEVLAGKIVPLFKLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCQPPDAESKTKADQIYCQYEIGVLLNSINDTMIPKLVADDIPLIQSLLLDVFPGSQLQPIQMDQLRKKIQEIAKQRHLVTKQEWVEKILQLHQILNINHGVMMVGPSGGGKTTSWEVYLEAIEQVDNIKSEAHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESTKRHWIIFDGDVDPEWVENLNSLLDDNKLLTLPNGERLALPNNVRVMFEVQDLKYATLATISRCGMVWFSEEILTTQMIFQNYLDTLSNEPFDPQEKEQQKRNENIPAGLKVQKECAAIISQYFEPGGLVHKVLEDAGQRPHIMDFTRLRVLNSFFSLMNRSIVNVIEYNQLHSDFPMSPENQSNYITNRLLYSLMWGLGGSMGLVERENFSKFIQTIAITPVPANTIPLLDYSVSIDDANWSLWKNKVEVETHKVASPDVVIPTVDTTRHVDVLHAWLSEHRPLILCGPPGSGKTMTLTSTLRAF-PDFEVVSLNFSSATTPELLLKTFDHHCEYKRTPSGETVL--RPTQLGKWLVVFCDEINLPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIKLD-KIQFVGACNPPTDAGR----------VQLTHRFLRHAPILL--VDFPSTSSLTQIYGTFNRALMKLLPNLRSFADNLTDAMVEFYSESQKRFTPDIQAHYIYSPRELSRWDRALLEAIQTMDGCTLEGLVRLWAHEALRLFQDRLVETEEKEWTDKKIDEVALKHFPSVNLDALKRPILYSNWLTKDYQPVNRSDLREYVKARLKVFYEEELDVPLVLFNEVLDHILRIDRVFRQPQGHALLIGVSGGGKSVLSRFVAWMNGLSIYTIKVNNNYKSSDFDDDLRMLLKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEVPGLFEGEEFTALMHACKETAQRNGLILDSEEELYKYFTSQVRRNLHVVFTMNPASPDFHNRSATSPALFNRCVLDWFGEWSPEALFQVGSEFTRNLDLENPQYIAPPVFIQEAEILMAIPPSHRDAVVSSLVYIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLEKAEPAIIEAQEAVSTIKKKHLDEIKSLPKPPTPVKLAMEAVCLMLGGKKLEWADIRKKIMEPNFITSIINYDTKKMMTPKIREAITKGYLEDPGFDYETVNRASKACGPLVKWATAQTYYSEIL
[Model]
372-541
3vkhB
17%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGR---GSSGVGLTAA----V-LRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY--GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3vkhB
AIKDRHWKILKKRLNTNWIITELTLGSIWDSDLARNENIYREVITAAQGEIALEEFLKGVREFWTTLELDLVNYQRKCKLVRGWDDLFNKLAEHLNSISAMKMSPYYKVFEEEANHWDDRLNKVRSLLDVWIDVQRRWVYLEGIFINQLLPAESTRFKSINSEFIAILKKVSGAPLILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDIIKIQKHFRKMFAGLANLTLDDEKTTIIGMSSAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALGGGTLQQSKIQEQLQSIEQTTQMILNNLADSVLQDLSAQKRKKFEHLITELVHQRDVVRQLQKCKNLTGNKDFDWLYHMRYYYDATQENVLHKLVIHMANATFYYGFEYLGIGERLVQTPLTDRCYLTLTQALESRMGGNPFGPAGTGKTETVKALGSQLGRFVLVFCCDEGFDLQAMSRIFVGLCQCGAWGCFDEFNRLEERILSAVSQQIQTIQVALKENSKEVNISLHQDMGIFVTMNPGYAGRSNLPDNLKKLFRSMAMIKPDREMIAQVMLYSQGFKTAEVLAGKIVPLFKLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCDQIYCQYEIGVLLNSINDTMIPKLVADDIPLIQSLLLDVFPGLQPIQMDQLRKKIQEIAKQRHLVTKQEWVEKILQLHQILNINHGVMMVGPSGGGKTTSWEVYLEAIEQVDNIKSEAHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESTKRHWIIFDGDVDPEWVENLNSLLDDNKLLTLPNGERLALPNNVRVMFEVQDLKYATLATISRCGMVWFSEEILTTQMIFQNYLDTLSNEPFDPQEAGLKVQKECAAIISQYFEPGGLVHKVLEDAGQRPHIMDFTRLRVLNSFFSLMNRSIVNVIEYNQLHSDFPMSPENQSNYITNRLLYSLMWGLGGSMGLVERENFSKFIQTIAITPVPANTIPLLDYSVSIDDANWSLWKNKVEVETHKVASPDVVIPTVDTTRHVDVLHAWLSEHRPLILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTPELLLKTFDHHCEYKRTPSGETVLRP--TQLGKWLVVFCDEINLPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIKLD-KIQFVGACNPPTDAGRV----------QLTHRFLRHAPILL--VDFPSTSSLTQIYGTFNRALMKLLPNLRSFADNLTDAMVEFYSESQKRFTPDIQAHYIYSPRELSRWDRALLEAIQTMDGCTLEGLVRLWAHEALRLFQDRLVETEEKEWTDKKIDEVALKHFPSVNLDALKRPILYSNWLTKDYQPVNRSDLREYVKARLKVFYEEELDVPLVLFNEVLDHILRIDRVFRQPQGHALLIGVSGGGKSVLSRFVAWMNGLSIYTIKVNNNYKSSDFDDDLRMLLKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEEEFTALMHACKETAQRSEEELYKYFTSQVRRNLHVVFTMNPASPDFHNRSATSPALFNRCVLDWFGEWSPEALFQVGSEFTRNLDLENPQYIAPPVFIQEAEIMMAIPPSHRDAVVSSLVYIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQ
[Model]
375-541
3vkhA
15%
>target
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS---------------GVG----LTAAVLRDS-VSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVM----EQQTISI-AKAG----ILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3vkhA
NIYREVITAAQGEIALEEFLKGVREFWTTLELDLVNYQRKCKLVRGWDDLFNKLAEHLNSISAMKMSPYYKVFEEEANHWDDRLNKVRSLLDVWIDVQRRWVYLEGIFINQLLPAESTRFKSINSEFIAILKKVSGAPLILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDIIKIQKHFRKMFAGLANLTLDDEKTTIIGMSSAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALGGGTLQQSKIQEQLQSIEQTTQMILNNLADSVLQDLSAQKRKKFEHLITELVHQRDVVRQLQKCKNLTGNKDFDWLYHMRYYYDATQENVLHKLVIHMANATFYYGFEYLGIGERLVQTPLTDRCYLTLTQALESRMGGNPFGPAGTGKTETVKALGSQLGRFVLVFCCDEGFDLQAMSRIFVGLCQCGAWGCFDEFNRLEERILSAVSQQIQTIQVALKENSKEVELLNISLHQDMGIFVTMNPGYAGRSNLPDNLKKLFRSMAMIKPDREMIAQVMLYSQGFKTAEVLAGKIVPLFKLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCQPPDAESKTKADQIYCQYEIGVLLNSINDTMIPKLVADDIPLIQSLLLDVFPGSQLQPIQMDQLRKKIQEIAKQRHLVTKQEWVEKILQLHQILNINHGVMMVGPSGGGKTTSWEVYLEAIEQVDNIKSEAHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESTKRHWIIFDGDVDPEWVENLNSLLDDNKLLTLPNGERLALPNNVRVMFEVQDLKYATLATISRCGMVWFSEEILTTQMIFQNYLDTLSNEPFDPQEKEQQKRNENIPAGLKVQKECAAIISQYFEPGGLVHKVLEDAGQRPHIMDFTRLRVLNSFFSLMNRSIVNVIEYNQLHSDFPMSPENQSNYITNRLLYSLMWGLGGSMGLVERENFSKFIQTIAITPVPANTIPLLDYSVSIDDANWSLWKNKVEVETHKVASPDVVIPTVDTTRHVDVLHAWLSEHRPLILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTPELLLKTFDHHCEYKRTPSGETVLRPTQLGKWLVVFCDEINLPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIKLDKIQFVGACNPPTDAGRVQLTHRFLRHAPILLVDFPSTSSLTQIYGTFNRALMKLLPNLRSFADNLTDAMVEFYSESQKRFTPDIQAHYIYSPRELSRWDRALLEAIQTMDGCTLEGLVRLWAHEALRLFQDRLVETEEKEWTDKKIDEVALKHFPSVNLDALKRPILYSNWLTKDYQPVNRSDLREYVKARLKVFYEEELDVPLVLFNEVLDHILRIDRVFRQPQGHALLIGVSGGGKSVLSRFVAWMNGLSIYTIKVNNNYKSSDFDDDLRMLLKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEVP-----GLFEGEEFTALMHACKETAQRNGLILDSEEELYKYFTSQVRRNLHVVFTMNPASPD------FHNRSATSPALFNRCVLDWF--GEWSPEALFQVGSEFTRNLDLENPQYIAPPVFIQEAEILMAIPPSHRDAVVSSLVYIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLEKAEPAIIEAQEAVSTIKKKHLDEIKSLPKPPTPVKLAMEAVCLMLGGKKLEWADIRKKIMEPNFITSIINYDTKKMMTPKIREAITKGYLEDPGFDYETVNRASKACGPLVKWATAQTYYSEIL
[Model]
375-405
3vkhB
32%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IHICLMGDPGVAKSQLLSYIDRLAPRSQYTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3vkhB
AIKDRHWKILKKRLNTNWIITELTLGSIWDSDLARNENIYREVITAAQGEIALEEFLKGVREFWTTLELDLVNYQRKCKLVRGWDDLFNKLAEHLNSISAMKMSPYYKVFEEEANHWDDRLNKVRSLLDVWIDVQRRWVYLEGIFINQLLPAESTRFKSINSEFIAILKKVSGAPLILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDIIKIQKHFRKMFAGLANLTLDDEKTTIIGMSSAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALGGGTLQQSKIQEQLQSIEQTTQMILNNLADSVLQDLSAQKRKKFEHLITELVHQRDVVRQLQKCKNLTGNKDFDWLYHMRYYYDATQENVLHKLVIHMANATFYYGFEYLGIGERLVQTPLTDRCYLTLTQALESRMGGNPFGPAGTGKTETVKALGSQLGRFVLVFCCDEGFDLQAMSRIFVGLCQCGAWGCFDEFNRLEERILSAVSQQIQTIQVALKENSKEVNISLHQDMGIFVTMNPGYAGRSNLPDNLKKLFRSMAMIKPDREMIAQVMLYSQGFKTAEVLAGKIVPLFKLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCDQIYCQYEIGVLLNSINDTMIPKLVADDIPLIQSLLLDVFPGLQPIQMDQLRKKIQEIAKQRHLVTKQEWVEKILQLHQILNINHGVMMVGPSGGGKTTSWEVYLEAIEQVDNIKSEAHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESTKRHWIIFDGDVDPEWVENLNSLLDDNKLLTLPNGERLALPNNVRVMFEVQDLKYATLATISRCGMVWFSEEILTTQMIFQNYLDTLSNEPFDPQEAGLKVQKECAAIISQYFEPGGLVHKVLEDAGQRPHIMDFTRLRVLNSFFSLMNRSIVNVIEYNQLHSDFPMSPENQSNYITNRLLYSLMWGLGGSMGLVERENFSKFIQTIAITPVPANTIPLLDYSVSIDDANWSLWKNKVEVETHKVASPDVVIPTVDTTRHVDVLHAWLSEHRPLILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTPELLLKTFDHHCEYKRTPSGETVLRPTQLGKWLVVFCDEINLPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIKLDKIQFVGACNPPTDAGRVQLTHRFLRHAPILLVDFPSTSSLTQIYGTFNRALMKLLPNLRSFADNLTDAMVEFYSESQKRFTPDIQAHYIYSPRELSRWDRALLEAIQTMDGCTLEGLVRLWAHEALRLFQDRLVETEEKEWTDKKIDEVALKHFPSVNLDALKRPILYSNWLTKDYQPVNRSDLREYVKARLKVFYEEELDVPLVLFNEVLDHILRIDRVFRQPQGHALLIGVSGGGKSVLSRFVAWMNGLSIYTIKVNNNYKSSDFDDDLRMLLKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEEEFTALMHACKETAQRSEEELYKYFTSQVRRNLHVVFTMNPASPDFHNRSATSPALFNRCVLDWFGEWSPEALFQVGSEFTRNLDLENPQYIAPPVFIQEAEIMMAIPPSHRDAVVSSLVYIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQ
[Model]
3f9v: CRYSTAL STRUCTURE OF A NEAR FULL-LENGTH ARCHAEAL MCM: FUNCTIONAL INSIGHTS FOR AN AAA+ HEXAMERIC HELICASE Solved by: X-RAY, Resolution: 4.35A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
8-645
3f9vA
31%
>target
--IEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKMTKSDDDVSGAGELSSEELKQIAEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHE-RQPTVPESLADYITAAYVEMRREARASK-DATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLL
>3f9vA
QIDYRDVFIEFLTTFKGN----NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPT-------------------------------------YQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQ-DSPVKRGSRAVFDIYMKVSSIEVSQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLEDTRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPG-EQDRELANYILDVHSGKS----TKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLESVG
[Model]
3hte: CRYSTAL STRUCTURE OF NUCLEOTIDE-FREE HEXAMERIC CLPX Solved by: X-RAY, Resolution: 4.03A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
340-465
3hteA
19%
>target
------------IAPEIYGHEDVKKALLLLLVGGVDQ----SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVS---GE-LTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3hteA
SALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADA----TTLTAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRVSGEGVQQALLKLIEGTEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGK
[Model]
335-625
3hteE
14%
>target
-----KLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQG--MKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE--ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPA-YGRYNPRRS-LEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR--LSTALARLRMVDIV--------------------------
>3hteE
LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFT-MADATTLTGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRGEGVQQALLKLIEGTDTSKILFICGGAFAGLDKVISHRVESEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLN-ELSEEALIQILKEPKN-----------------ALTKQYQALFNLEGVDLEFRDEALDAIAKKAM-------A----RKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQ
[Model]
340-611
3hteC
14%
>target
----------IAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLE-GGALVLADQGVCCIDEFDKMA--EADRTAIHEVMEQQTIS---IAKAGILTTLNARCSILAAANPAYGRYNP--RRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYI--AMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR------------------------------------
>3hteC
LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRL-----RNGKSNILLIGPTGSGKTLLAETLARLLDVPFT-M---ADATTLED---VENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRGEGVQQALLKLIEGVDTSKILFICGG---AFAGLDKVISHRVS-EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLN-ELSEEALIQILKEPKN-----------------ALTKQYQALFNLEGVDLEFRDEALDAIAKKA-------MAR----KTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIY
[Model]
340-468
3hteF
19%
>target
---------IAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAA-VLRDSVSGE----LTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTIS---------------------------------------------------------------------------------------------------------------------------------------------------------------
>3hteF
PTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLR-----NGKSNILLIGPTGSGKTLLAETLARLLDVPFTM----ADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISGEGVQQALLKLIEGTDTSKILFICGGAFAGLDKVISHRVKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIY
[Model]
340-626
3hteB
15%
>target
----------IAPEIYGHEDVKKALLLLLVGGVDQS----PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSV---SGE-LTLEGGALVLADQGVCCIDEFDKM---AEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYG-----RYNPRRS--L-------EQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIA--MCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR--LSTALARLRMVDIVE-------------------
>3hteB
LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFT-MADAT---TLTEGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRSGEGVQQALLKLIEGTLQVDTSK-IL--FICGGAFAGLDKVISHRVETGSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNE-LSEEALIQILKEPK-----------------NALTKQYQALFNLEGVDLEFRDEALDAIAKKAM-------A----RKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIY
[Model]
343-465
3hteD
20%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSP----QGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAV-LRDSV--SGEL-TLEGGALVLADQGVCCIDEFDKMAE-----ADRTAIHEVMEQQ------------------------------------------------------------------------------------------------------------------------------------------------------------
>3hteD
LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTM----ADATTLTEAYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSSGEGVQQALLKLIEGTDTSKILFICGGAFAGLDKVISHRVESEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMDVEKVVIDESVIDGQSKPLLIY
[Model]
3cf3: STRUCTURE OF P97/VCP IN COMPLEX WITH ADP Solved by: X-RAY, Resolution: 4.40A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-536
3cf3B
16%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKAL----LLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT--LEGGALV---LADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3cf3B
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHP--ALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN-GPE---IMS-----KLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK-----------QRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVDI-GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-536
3cf3A
16%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKAL----LLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT--LEGGALV---LADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3cf3A
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHP--ALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN-GPE---IMS-----KLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK-----------QRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVDI-GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-536
3cf3C
16%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKAL----LLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT--LEGGALV---LADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3cf3C
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHP--ALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN-GPE---IMS-----KLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK-----------QRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVDI-GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
344-535
3cf3B
19%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRGSSGVGLTAAVLRDSVSGELTLEGGALV--------LADQGVCCIDEFDKMAE--------------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQ-------------------------------------------------------------------------------------
>3cf3B
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP-----EL---------LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMD---------GMST--KKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
344-535
3cf3A
19%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRGSSGVGLTAAVLRDSVSGELTLEGGALV--------LADQGVCCIDEFDKMAE--------------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQ-------------------------------------------------------------------------------------
>3cf3A
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP-----EL---------LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMD---------GMST--KKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
344-535
3cf3C
19%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRGSSGVGLTAAVLRDSVSGELTLEGGALV--------LADQGVCCIDEFDKMAE--------------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQ-------------------------------------------------------------------------------------
>3cf3C
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP-----EL---------LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMD---------GMST--KKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
2dhr: WHOLE CYTOSOLIC REGION OF ATP-DEPENDENT METALLOPROTEASE FTSH (G399L) Solved by: X-RAY, Resolution: 3.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-539
2dhrD
19%
>target
---------EIYGHEDVKKALLL--LLVGGVDQS-PQGMK-IRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA----EAD--RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrD
TEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF----E-TAK---RHAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDGF-----------EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
343-539
2dhrB
19%
>target
----------EIYGHEDVKKALL--LLLVGGVDQS-PQGMK-IRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA----EAD--RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrB
LTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF----E-TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDG---------F--EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
343-539
2dhrF
19%
>target
--------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA----EA--DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrF
RARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARI--PKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFE-----TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDG---------F--EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
343-539
2dhrC
19%
>target
--------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE--------------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrC
RARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARI--PKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF-----ETAK---RHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGF-----------EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
343-539
2dhrE
19%
>target
--------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE--------------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrE
RARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARI--PKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF-----ETAK---RHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGF-----------EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
343-539
2dhrA
19%
>target
--------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE--------------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrA
RARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARI--PKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF-----ETAK---RHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGF-----------EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
1ltl: THE DODECAMER STRUCTURE OF MCM FROM ARCHAEAL M. THERMOAUTOTROPHICUM Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
1-306
1ltlE
19%
>target
MALKDYAIEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHR--EQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKM
>1ltlE
MKTVDKSKTLTKFEEFFSLQ-----------DYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-------------------------------------------RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECG-----G-RSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRD------ERTKRFKNFIYGNYTEFL
[Model]
10-306
1ltlF
19%
>target
---KEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHR--EQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKM
>1ltlF
VDKSKTLTKFEEFFSL--------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-------------------------------------------RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSE--CGG----RSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRD------ERTKRFKNFIYGNYTEFL
[Model]
10-306
1ltlB
19%
>target
---KEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHR--EQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKM
>1ltlB
VDKSKTLTKFEEFFSL--------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-------------------------------------------RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSE--CGG----RSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRD------ERTKRFKNFIYGNYTEFL
[Model]
10-306
1ltlA
19%
>target
---KEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHR--EQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKM
>1ltlA
VDKSKTLTKFEEFFSL--------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-------------------------------------------RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSE--CGG----RSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRD------ERTKRFKNFIYGNYTEFL
[Model]
10-306
1ltlD
19%
>target
---KEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHR--EQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKM
>1ltlD
VDKSKTLTKFEEFFSL--------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-------------------------------------------RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSE--CGG----RSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRD------ERTKRFKNFIYGNYTEFL
[Model]
10-306
1ltlC
19%
>target
---KEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHR--EQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKM
>1ltlC
VDKSKTLTKFEEFFSL--------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-------------------------------------------RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSE--CGG----RSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRD------ERTKRFKNFIYGNYTEFL
[Model]
2ce7: EDTA TREATED Solved by: X-RAY, Resolution: 2.75A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-539
2ce7C
19%
>target
------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMK-IRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA-DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ce7C
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKG---ILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF-----AQAKA---HAPCIVFIDEIDAVGREQTLNQLLVEMDGF-----------DSKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIV-VDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEFE
[Model]
343-539
2ce7D
19%
>target
------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADR--TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ce7D
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARM--PKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF----A-QAKA---HAPCIVFIDEIDAVGEREQTLNQLLVEMDGF--D-S--------KEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEFE
[Model]
343-538
2ce7A
19%
>target
------------EIYGHEDVKKALLL--LLVGGVDQSP-QGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE-----ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ce7A
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPK---GILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF-----AQAKA---HAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGF---------D--SKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS
[Model]
343-539
2ce7F
19%
>target
------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMK-IRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRT----AIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ce7F
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPK---GILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRDEREQTLNQLLVEMDG---------FD--SKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEF
[Model]
343-538
2ce7E
18%
>target
----------EIYGHEDVKKALL--LLLVGGVDQSP-QGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD----RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ce7E
PSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARM--PKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAK---AHAPCIVFIDEIDAVGRHEREQTLNQLLVEMDG---------FD--SKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIALLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS
[Model]
343-538
2ce7B
19%
>target
------------EIYGHEDVKKALLLL--LVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADR----TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ce7B
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARM--PKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRDEREQTLNQLLVEMDG---------FD--SKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAGPLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEF
[Model]
3cf2: STRUCTURE OF P97/VCP IN COMPLEX WITH ADP/AMP-PNP Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-537
3cf2D
15%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVG--GVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT--LEGGAL---VLADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3cf2D
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN-GPE---IMS-----KLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK---Q--------RAHVIVMAATNRPN-------------SIDPALRRFGRFDREVD-IGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIADRVINQILTEMDGMSTKKNVFIIGANRPDIIDPAILRPGRLDQLIYIKSRVAILKANLRKSAKDDLTEICQRACKLAIRESIEVPEHFEEAMEMFA
[Model]
343-537
3cf2C
15%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVG--GVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT--LEGGAL---VLADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3cf2C
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN-GPE---IMS-----KLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK---Q--------RAHVIVMAATNRPN-------------SIDPALRRFGRFDREVD-IGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIADRVINQILTEMDGMSTKKNVFIIGANRPDIIDPAILRPGRLDQLIYIKSRVAILKANLRKSAKDDLTEICQRACKLAIRESIEVPEHFEEAMEMFA
[Model]
343-537
3cf2B
15%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVG--GVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT--LEGGAL---VLADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3cf2B
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN-GPE---IMS-----KLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK---Q--------RAHVIVMAATNRPN-------------SIDPALRRFGRFDREVD-IGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIADRVINQILTEMDGMSTKKNVFIIGANRPDIIDPAILRPGRLDQLIYIKSRVAILKANLRKSAKDDLTEICQRACKLAIRESIEVPEHFEEAMEMFA
[Model]
343-537
3cf2A
15%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVG--GVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT--LEGGAL---VLADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3cf2A
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN-GPE---IMS-----KLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK---Q--------RAHVIVMAATNRPN-------------SIDPALRRFGRFDREVD-IGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIADRVINQILTEMDGMSTKKNVFIIGANRPDIIDPAILRPGRLDQLIYIKSRVAILKANLRKSAKDDLTEICQRACKLAIRESIEVPEHFEEAMEMFA
[Model]
344-521
3cf2D
19%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGVD--QSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGA-----LVLA---DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLI-------------------------------------------------
>3cf2D
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI-SIKGPE---L---------LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIADRVINQILTEMDG---------MST--KKNVFII-GANRP-----------D--IIDPAILRPGRLDQLIYIKSRVAILKANLRKSAKDDLTEICQRACKLAIRESIEVPEHFEEAMEMFA
[Model]
344-521
3cf2C
19%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGVD--QSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGA-----LVLA---DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLI-------------------------------------------------
>3cf2C
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI-SIKGPE---L---------LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIADRVINQILTEMDG---------MST--KKNVFII-GANRP-----------D--IIDPAILRPGRLDQLIYIKSRVAILKANLRKSAKDDLTEICQRACKLAIRESIEVPEHFEEAMEMFA
[Model]
344-521
3cf2B
19%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGVD--QSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGA-----LVLA---DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLI-------------------------------------------------
>3cf2B
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI-SIKGPE---L---------LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIADRVINQILTEMDG---------MST--KKNVFII-GANRP-----------D--IIDPAILRPGRLDQLIYIKSRVAILKANLRKSAKDDLTEICQRACKLAIRESIEVPEHFEEAMEMFA
[Model]
344-521
3cf2A
19%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGVD--QSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGA-----LVLA---DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLI-------------------------------------------------
>3cf2A
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI-SIKGPE---L---------LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIADRVINQILTEMDG---------MST--KKNVFII-GANRP-----------D--IIDPAILRPGRLDQLIYIKSRVAILKANLRKSAKDDLTEICQRACKLAIRESIEVPEHFEEAMEMFA
[Model]
3m6a: CRYSTAL STRUCTURE OF BACILLUS SUBTILIS LON C-TERMINAL DOMA Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
338-536
3m6aC
19%
>target
----------------------------------------------------------------------ASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQ---TISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aC
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQ--KLTK--SLKG-PILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLG----------------GR-IIQGMKKAGKLNPVFLLDEIDKMSA-----MLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
338-536
3m6aF
19%
>target
----------------------------------------------------------------------ASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQ---TISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aF
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQ--KLTK--SLKG-PILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLG----------------GR-IIQGMKKAGKLNPVFLLDEIDKMSA-----MLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
338-536
3m6aB
19%
>target
----------------------------------------------------------------------ASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQ---TISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aB
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQ--KLTK--SLKG-PILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLG----------------GR-IIQGMKKAGKLNPVFLLDEIDKMSA-----MLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
338-536
3m6aE
19%
>target
----------------------------------------------------------------------ASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQ---TISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aE
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQ--KLTK--SLKG-PILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLG----------------GR-IIQGMKKAGKLNPVFLLDEIDKMSA-----MLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
338-536
3m6aA
19%
>target
----------------------------------------------------------------------ASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQ---TISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aA
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQ--KLTK--SLKG-PILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLG----------------GR-IIQGMKKAGKLNPVFLLDEIDKMSA-----MLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
338-536
3m6aD
19%
>target
----------------------------------------------------------------------ASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQ---TISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aD
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQ--KLTK--SLKG-PILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLG----------------GR-IIQGMKKAGKLNPVFLLDEIDKMSA-----MLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
2cea: WILDTYPE Solved by: X-RAY, Resolution: 2.75A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-539
2ceaC
19%
>target
------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMK-IRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA-DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ceaC
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKG---ILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF-----AQAKA---HAPCIVFIDEIDAVGREQTLNQLLVEMDGF-----------DSKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIV-VDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEFE
[Model]
343-539
2ceaD
19%
>target
------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADR--TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ceaD
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARM--PKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF----A-QAKA---HAPCIVFIDEIDAVGEREQTLNQLLVEMDGF--D-S--------KEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEFE
[Model]
343-538
2ceaA
19%
>target
------------EIYGHEDVKKALLL--LLVGGVDQSP-QGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE-----ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ceaA
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPK---GILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF-----AQAKA---HAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGF---------D--SKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS
[Model]
343-539
2ceaF
19%
>target
------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMK-IRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRT----AIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ceaF
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPK---GILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRDEREQTLNQLLVEMDG---------FD--SKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEF
[Model]
343-538
2ceaE
18%
>target
----------EIYGHEDVKKALL--LLLVGGVDQSP-QGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD----RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ceaE
PSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARM--PKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAK---AHAPCIVFIDEIDAVGRHEREQTLNQLLVEMDG---------FD--SKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIALLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS
[Model]
343-538
2ceaB
19%
>target
------------EIYGHEDVKKALLLL--LVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADR----TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ceaB
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARM--PKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRDEREQTLNQLLVEMDG---------FD--SKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAGPLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEF
[Model]
2vl6: STRUCTURAL ANALYSIS OF THE SULFOLOBUS SOLFATARICUS MCM PROTEIN N-TERMINAL DOMAIN Solved by: X-RAY, Resolution: 2.8A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
8-305
2vl6C
19%
>target
--IEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVK-
>2vl6C
QIDYRDVFIEFLTTFKGN----NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDP-------------------------------------TYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDS-PVKRGSRAVFDIYMKVSSIEVS
[Model]
8-305
2vl6B
19%
>target
--IEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVK-
>2vl6B
QIDYRDVFIEFLTTFKGN----NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDP-------------------------------------TYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDS-PVKRGSRAVFDIYMKVSSIEVS
[Model]
8-305
2vl6A
19%
>target
--IEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVK-
>2vl6A
QIDYRDVFIEFLTTFKGN----NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDP-------------------------------------TYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDS-PVKRGSRAVFDIYMKVSSIEVS
[Model]
1g8p: CRYSTAL STRUCTURE OF BCHI SUBUNIT OF MAGNESIUM CHELATASE Solved by: X-RAY, Resolution: 7.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
342-640
1g8pA
18%
>target
------PEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR----------SQYTTGRGSSGVGLTAA--------------------------VLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHER--QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS-------------
>1g8pA
RPVFPFSAIVGQEDMKLALLLTAVDP-----------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMI-PDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKA-FLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS----------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
4eiw: WHOLE CYTOSOLIC REGION OF ATP-DEPENDENT METALLOPROTEASE FT Solved by: X-RAY, Resolution: 3.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-539
4eiwD
19%
>target
----------EIYGHEDVKKALL--LLLVGGVDQS-PQGMK-IRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA----EAD--RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwD
LTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF----E-TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDG---------F--EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
343-539
4eiwF
19%
>target
----------EIYGHEDVKKALL--LLLVGGVDQS-PQGMK-IRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA----EAD--RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwF
LTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF----E-TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDG---------F--EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
343-539
4eiwB
19%
>target
----------EIYGHEDVKKALL--LLLVGGVDQS-PQGMK-IRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA----EAD--RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwB
LTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF----E-TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDG---------F--EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
343-539
4eiwC
18%
>target
-------------EIYGHEDVKKALL--LLLVGGVDQS-PQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA--------------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwC
ARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDL----FE-TAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDG---------F--EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
343-539
4eiwE
18%
>target
-------------EIYGHEDVKKALL--LLLVGGVDQS-PQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA--------------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwE
ARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDL----FE-TAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDG---------F--EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
343-539
4eiwA
18%
>target
-------------EIYGHEDVKKALL--LLLVGGVDQS-PQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA--------------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwA
ARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDL----FE-TAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDG---------F--EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
2zam: CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B APO-FORM Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-539
2zamA
18%
>target
------------EIYGHEDVKKALLLLLVGGVDQ--S-PQG-MKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD--RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY---------------------------------------------------------------------------------------------------------------------------------
>2zamA
AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWR---GILLFGPPGTGKSYLAKAVATEANNSTFFSISSSD---LVSS---EKLVKNLFQLA--R-ENKPSIIFIDEIDSSEAARRIKTEFLVQMQ---------GVG-VDNDGILVLGATNIPW-------------VLDSAIRRRFEKRI-YIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNCIVNDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMWDMLRSLSSTKPTVNEQDLLKLKKFTEDFGQEG
[Model]
3cf1: STRUCTURE OF P97/VCP IN COMPLEX WITH ADP/ADP.ALFX Solved by: X-RAY, Resolution: 4.40A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
3cf1A
16%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL--TLEGGALVLA---DQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3cf1A
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI-NGPE---IMS-----KLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL---------K--QRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVDI-GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-536
3cf1B
16%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKAL----LLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT--LEGGALV---LADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3cf1B
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHP--ALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN-GPE---IMS-----KLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK-----------QRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVDI-GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-536
3cf1C
16%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKAL----LLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT--LEGGALV---LADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3cf1C
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHP--ALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN-GPE---IMS-----KLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK-----------QRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVDI-GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
344-535
3cf1B
19%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRGSSGVGLTAAVLRDSVSGELTLEGGALV--------LADQGVCCIDEFDKMAE--------------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQ-------------------------------------------------------------------------------------
>3cf1B
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP-----EL---------LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMD---------GMST--KKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
344-535
3cf1C
19%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRGSSGVGLTAAVLRDSVSGELTLEGGALV--------LADQGVCCIDEFDKMAE--------------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQ-------------------------------------------------------------------------------------
>3cf1C
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP-----EL---------LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMD---------GMST--KKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
344-536
3cf1A
18%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGVD--QSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGAL-------V-LADQGVCCIDEFDKMA----------EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQH------------------------------------------------------------------------------------
>3cf1A
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI-SIKGP---EL---------LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGDGGGAADRVINQILTEMDG---------MST--KKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
3syk: CRYSTAL STRUCTURE OF THE AAA+ PROTEIN CBBX, SELENOMETHIONI Solved by: X-RAY, Resolution: 3.08A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
339-590
3sykA
15%
>target
---------------------------SIAPEIYGHEDVKKALLLLL-VGGVDQ---SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT-----LEGGALVLADQGVCCIDEFDKMAEADRT------AIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRR----------------------------------------------------
>3sykA
MTDAATAPTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLGLAHETPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVR------KGHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDDYGQEAIEILLQVMEN-------------NRDDLVVILAGYADR--------MENFFQSNPGFRSRIAHHIEFPDY-SDEELFEIAGHMLD----------------------------DQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTAPLDARALSTIAEEDIRASRVFKGG
[Model]
338-536
3sykB
18%
>target
------------------ASIAPEIYGHEDVKKALLLL--LVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT-----LEGGALVLADQGVCCIDEFDKMAEADR---------TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH---------------------------------------------------------------------------------
>3sykB
TSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLL-VERARQKLGLTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVTR----DDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENN-------------RDDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEFPD-YSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
2rko: CRYSTAL STRUCTURE OF THE VPS4P-DIMER Solved by: X-RAY, Resolution: 3.35A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
2rkoA
18%
>target
-----EIYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRGSSGV-GLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRT--AIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT----------------------------------------------------------------------------------------------------------------
>2rkoA
NVKWEDVAGLEGAKEALKEAVILPVKFPHLFKG-NRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSS--SDLVSGESEKLVKQ-----LFAMA---RENKPSIIFIDEVDALTASRRIKTELLVQMNG---------V-----QGVLVLGATNIPW-------------QLDSAIRRRFERRI-YIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG
[Model]
3f8t: CRYSTAL STRUCTURE ANALYSIS OF A FULL-LENGTH MCM HOMOLOG FROM METHANOPYRUS KANDLERI Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
8-645
3f8tA
18%
>target
---IEKEKVKKFLQEFYYENELGKKQFKYGTQLVHLAHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLDVYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKLLTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPVLRTGFQQMAQGLLSETYLEAHWIVKMTKSDDDVSGAGELSSEELKQIAEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARA----SKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLL-
>3f8tA
RIGEVASRFGLPTRVLIEIV----RTESFQRSLARVTSG--KPVVLDL---RELDSDLASWIATHARLVEPALRELVRTV----AP-------------------------------------D-----VEPRVRFRGLPHRFRRVERIRPMDGALISIEGVVREVRGAE----RLEHAIVDTGSEL----------------------------------------------------------------VAVRLHGHRLGPGLRVEILGIVR----------------SATLDALEVHKKDP-IPEVHPDPAELEEFRELADK-DPLTTFARAIAP-LPGAEEVGKMLALQLFSCVGK------NSERLHVLLAGYPVVCSEILHHVLDHLAPRGVYVDLRRTELTDLTAVLKED---RGWALRAGAAVLADGGILAVDHLEGAPEPHRWALMEAMDKGTVTVD--GI--ALNARCAVLAAINPG----EPSDPPIARIDLDQDFLSHFDLIAFLGVP------------------------------SYTLLRRYLLYAIREHPAPELTEEARKRLEHWYETRREEVEERLGMGLPTLPVTRRQLESVERLAKAHARMRLSDDVEPEDVDIAAELVDWYLETAMQ
[Model]
3kds: APO-FTSH CRYSTAL STRUCTURE Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-539
3kdsE
18%
>target
------EIYGHEDVKKALLLL--LVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA-----DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3kdsE
KRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGAR--MPKGILLVGPPGTGATLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGF-----------DSKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIV-VDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAGPARKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKRLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSE
[Model]
343-539
3kdsG
18%
>target
------EIYGHEDVKKALLLL--LVGGVDQS-PQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLAD-QGVCCIDEFDKMAE-----ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3kdsG
KRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPK---GILLVGPPGTGATLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF----A-QA----KAHAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGF---------D--SKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIV-VDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAGPARKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSE
[Model]
343-538
3kdsF
18%
>target
------EIYGHEDVKKALLLL--LVGGVDQS-PQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLAD-QGVCCIDEFDKMAE-----ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3kdsF
KRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPK---GILLVGPPGTGATLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF----A-Q----AKAHAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGF---------D--SKEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIV-VDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAGPARKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS
[Model]
2x31: MODELLING OF THE COMPLEX BETWEEN SUBUNITS BCHI AND BCHD OFCHELATASE BASED ON SINGLE-PARTICLE CRYO-EM RECONSTRUCTION Solved by: X-RAY, Resolution: 7.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
342-640
2x31L
18%
>target
------PEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR----------SQYTTGRGSSGVGLTAA--------------------------VLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHER--QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS-------------
>2x31L
RPVFPFSAIVGQEDMKLALLLTAVDP-----------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMI-PDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKA-FLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS----------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
342-640
2x31H
18%
>target
------PEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR----------SQYTTGRGSSGVGLTAA--------------------------VLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHER--QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS-------------
>2x31H
RPVFPFSAIVGQEDMKLALLLTAVDP-----------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMI-PDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKA-FLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS----------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
342-640
2x31K
18%
>target
------PEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR----------SQYTTGRGSSGVGLTAA--------------------------VLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHER--QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS-------------
>2x31K
RPVFPFSAIVGQEDMKLALLLTAVDP-----------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMI-PDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKA-FLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS----------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
342-640
2x31G
18%
>target
------PEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR----------SQYTTGRGSSGVGLTAA--------------------------VLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHER--QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS-------------
>2x31G
RPVFPFSAIVGQEDMKLALLLTAVDP-----------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMI-PDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKA-FLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS----------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
342-640
2x31J
18%
>target
------PEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR----------SQYTTGRGSSGVGLTAA--------------------------VLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHER--QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS-------------
>2x31J
RPVFPFSAIVGQEDMKLALLLTAVDP-----------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMI-PDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKA-FLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS----------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
342-640
2x31I
18%
>target
------PEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR----------SQYTTGRGSSGVGLTAA--------------------------VLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHER--QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS-------------
>2x31I
RPVFPFSAIVGQEDMKLALLLTAVDP-----------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMI-PDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKA-FLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS----------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
1r7r: THE CRYSTAL STRUCTURE OF MURINE P97/VCP AT 3.6A Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
1r7rA
16%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVGGVDQSP---QGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL--TLEGGALV---LADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1r7rA
LKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELP-LRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI-NGPEIMS--------KLAGESESNLR-KAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG-------------LKAHVIVMAATNRPN-------------SIDPALRRFGRFDREVD-IGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESPVPEIRRDH
[Model]
344-535
1r7rA
17%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYGHEDVKKALLLLLVGGVDQS---PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGA-----LVL---ADQGVCCIDEFDKMAE--------------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQ-------------------------------------------------
>1r7rA
LKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQY-PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI-SIKGP---ELL---------TMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMD---------N--------VFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILKANLRKSDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESPVPEIRRDH
[Model]
2qp9: CRYSTAL STRUCTURE OF S.CEREVISIAE VPS4 Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
2qp9X
17%
>target
-----EIYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG-ALV-LADQGVCCIDEFDKMAEAD-----RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT--------------------------------------------------------------------------------------------------------------------
>2qp9X
NVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGN-RKPTSGILLYGPPGTGKSYLAKAVATEANSTFF-SVSSSDLVS--------KW-SEKLVKQLFAMARENKPSIIFIDQVDALTGSEASRRIKTELLVQMNG-------------VGQGVLVLGATNIPW-------------QLDSAIRRRFERRI-YIPLPDLAARTTMFEINVGDTPSVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTRKLTPSSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG
[Model]
2qz4: HUMAN PARAPLEGIN, AAA DOMAIN IN COMPLEX WITH ADP Solved by: X-RAY, Resolution: 2.22A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-539
2qz4A
17%
>target
------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITY---------------------------------------------------------
>2qz4A
MGVSFKDVAGMHEAKLEVREFVD-Y-LKSPEA---KVPKGALLLGPPGCGKTLLAKAVATEAQVPFL-AMAGAEFVEVIGGLGAARVRS-----LFKEAR---ARAPCIVYIDEIEQTLNQ----LLVEMD---------GM--GTTDHVIVLASTNRAD-------------ILDGALMRPGRLDRHVF-IDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHVHTLNFEYAVERVLAGTAKK
[Model]
2zao: CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B ADP-FORM Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
2zaoA
17%
>target
-----------EIYGHEDVKKALLLLLVGGVD--QS-PQG-MKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT----------------------------------------------------------------------------------------------------------------------------------
>2zaoA
IVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWR---GILLFGPPGTGKSYLAKAVATEANNSTFFSISSSSEKLV-----KN-----LFQLAR---ENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQ---------GV-GVDNDGILVLGATNIPW-------------VLDSAIRRRFEKRI-YIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNCIVNDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMWDMLRSLSSTKPTVNEQDLLKLKKFTEDFGQEG
[Model]
1xwi: CRYSTAL STRUCTURE OF VPS4B Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-539
1xwiA
17%
>target
------------EIYGHEDVKKALLLLLVGGVD--QS-PQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGE--LTLEGG-ALV-LADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY---------------------------------------------------------------------------------------------------------------------------------
>1xwiA
AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWR---GILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLV--------SKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQ---------GV-GVDNDGILVLGATNIPW-------------VLDSAIRRRFEKRI-YIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFGQEG
[Model]
3zuh: NEGATIVE STAIN EM MAP OF THE AAA PROTEIN CBBX, A RED-TYPE ACTIVASE FROM R. SPHAEROIDES Solved by: X-RAY, Resolution: 21.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
339-539
3zuhF
17%
>target
--------------------SIAPEIYGHEDVKKALLLLL--VGGVDQ-SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLE-----GGALVLADQGVCCIDEFDKMAEAD---------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY------------------------------------------------------------------------------
>3zuhF
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLG--LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRK------GHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYADR--------MENFFQSNPGFRSRIAHHIEFP-DYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
339-539
3zuhB
17%
>target
--------------------SIAPEIYGHEDVKKALLLLL--VGGVDQ-SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLE-----GGALVLADQGVCCIDEFDKMAEAD---------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY------------------------------------------------------------------------------
>3zuhB
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLG--LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRK------GHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYADR--------MENFFQSNPGFRSRIAHHIEFP-DYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
339-539
3zuhE
17%
>target
--------------------SIAPEIYGHEDVKKALLLLL--VGGVDQ-SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLE-----GGALVLADQGVCCIDEFDKMAEAD---------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY------------------------------------------------------------------------------
>3zuhE
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLG--LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRK------GHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYADR--------MENFFQSNPGFRSRIAHHIEFP-DYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
339-539
3zuhA
17%
>target
--------------------SIAPEIYGHEDVKKALLLLL--VGGVDQ-SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLE-----GGALVLADQGVCCIDEFDKMAEAD---------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY------------------------------------------------------------------------------
>3zuhA
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLG--LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRK------GHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYADR--------MENFFQSNPGFRSRIAHHIEFP-DYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
339-539
3zuhD
17%
>target
--------------------SIAPEIYGHEDVKKALLLLL--VGGVDQ-SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLE-----GGALVLADQGVCCIDEFDKMAEAD---------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY------------------------------------------------------------------------------
>3zuhD
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLG--LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRK------GHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYADR--------MENFFQSNPGFRSRIAHHIEFP-DYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
339-539
3zuhC
17%
>target
--------------------SIAPEIYGHEDVKKALLLLL--VGGVDQ-SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLE-----GGALVLADQGVCCIDEFDKMAEAD---------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY------------------------------------------------------------------------------
>3zuhC
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLG--LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRK------GHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYADR--------MENFFQSNPGFRSRIAHHIEFP-DYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
3syl: CRYSTAL STRUCTURE OF THE AAA+ PROTEIN CBBX, NATIVE STRUCTU Solved by: X-RAY, Resolution: 21.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
339-590
3sylA
15%
>target
---------------------------SIAPEIYGHEDVKKALLLLL-VGGVDQ---SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT-----LEGGALVLADQGVCCIDEFDKMAEADRT------AIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRR----------------------------------------------------
>3sylA
MTDAATAPTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLGLAHETPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVR------KGHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDDYGQEAIEILLQVMEN-------------NRDDLVVILAGYADR--------MENFFQSNPGFRSRIAHHIEFPDY-SDEELFEIAGHMLD----------------------------DQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTAPLDARALSTIAEEDIRASRVFKGG
[Model]
339-539
3sylB
17%
>target
--------------------SIAPEIYGHEDVKKALLLLL--VGGVDQ-SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLE-----GGALVLADQGVCCIDEFDKMAEAD---------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY------------------------------------------------------------------------------
>3sylB
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLG--LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRK------GHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYADR--------MENFFQSNPGFRSRIAHHIEFP-DYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
3eie: CRYSTAL STRUCTURE OF S.CEREVISIAE VPS4 IN THE SO4-BOUND STATE Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
3eieA
17%
>target
-------------EIYGHEDVKKALLLLLVGGV--DQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLA---DQGVCCIDEFDKMAEAD-----RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT---------------------------------------------------------------------------------------------------------------------
>3eieA
TAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNR--KPTSGILLYGPPGTGKSYLAKAVATEANSTFFS-VSSS---DLVSKWM---GESEKLVKQ-LFAMARENKPSIIFIDQVDALTGTEASRRIKTELLVQMN---------GVGND-SQGVLVLGATNIPW-------------QLDSAIRRRFERRI-YIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG
[Model]
2zan: CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B ATP-FORM Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
2zanA
17%
>target
-----------EIYGHEDVKKALLLLLVGGVD--QS-PQG-MKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT----------------------------------------------------------------------------------------------------------------------------------
>2zanA
IVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWR---GILLFGPPGTGKSYLAKAVATEANNSTFFSISSSSEKLV-----KN-----LFQLAR---ENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQ---------GV-GVDNDGILVLGATNIPW-------------VLDSAIRRRFEKRI-YIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNCIVNDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMWDMLRSLSSTKPTVNEQDLLKLKKFTEDFGQEG
[Model]
3glh: CRYSTAL STRUCTURE OF THE E. COLI CLAMP LOADER BOUND TO PSIPEPTIDE Solved by: X-RAY, Resolution: 3.89A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-519
3glhM
16%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSVSGELT------LEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glhM
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKLDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glhB
16%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSVSGELT------LEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glhB
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKLDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glhL
16%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSVSGELT------LEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glhL
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKLDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glhH
16%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSVSGELT------LEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glhH
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKLDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glhG
16%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSVSGELT------LEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glhG
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKLDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glhC
16%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSVSGELT------LEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glhC
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKLDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glhI
16%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAP--RS--QYTTGRGSS----GVGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glhI
QVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKLDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glhD
16%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAP--RS--QYTTGRGSS----GVGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glhD
QVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKLDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glhN
16%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAP--RS--QYTTGRGSS----GVGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glhN
QVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKLDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
3glf: CRYSTAL STRUCTURE OF THE ECOLI CLAMP LOADER BOUND TO PRIMETEMPLATE DNA Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-524
3glfG
16%
>target
--------------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPR----SQYTTGRGSSG----VGLTAAVLR-DSVS--G--E--LTLEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glfG
GLEVLFQGPHMSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQF-HLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glfH
15%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glfH
QVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glfC
15%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glfC
QVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glfI
16%
>target
---------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSS------GVGLTAAVLRDSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glfI
SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRI-----------HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL-IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM
[Model]
343-519
3glfD
16%
>target
---------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSS------GVGLTAAVLRDSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glfD
SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRI-----------HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL-IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM
[Model]
343-519
3glfB
16%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG-----------VGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glfB
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCE---TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
2qpa: CRYSTAL STRUCTURE OF S.CEREVISIAE VPS4 IN THE PRESENCE OF ADP Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
2qpaA
17%
>target
---------------EIYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGA-----LVLA---DQGVCCIDEFDKMAEA--DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT---------------------------------------------------------------------------------------------------------------------------
>2qpaA
LSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGN-RKPTSGILLYGPPGTGKSYLAKAVATEANSTFFS-VSSSD---L---------VSKWMGESEKLVKQLFAMARENKPSIIFIDQVDALTASRRIKTELLVQMNG-------------VSQGVLVLGATNIPW-------------QLDSAIRRRFERRIY-IPLPDLAARTTMFEINVGDTPSVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPSSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQE
[Model]
343-538
2qpaC
16%
>target
-----------EIYGHEDVKKALLLLLVGGV--DQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD--RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT------------------------------------------------------------------------------------------------------------------------
>2qpaC
ILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNR--KPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQ-----LFAMAR---ENKPSIIFIDQVDALTASRRIKTELLVQMNG---------V------GVLVLGATNIPW-------------QLDSAIRRRFERRIY-IPLPDLAARTTMFEINVGDTPSVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPSSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDF
[Model]
343-539
2qpaB
16%
>target
---------------EIYGHEDVKKALLLLLVG--GVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD--RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------
>2qpaB
LSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNR--KPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQL----F-AMAR---ENKPSIIFIDQVDALTASRRIKTELLVQMN---------GV------GVLVLGATNIPW-------------QLDSAIRRRFERRI-YIPLPDLAARTTMFEINVGDTPSVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPSSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQE
[Model]
3cf0: STRUCTURE OF D2 SUBDOMAIN OF P97/VCP IN COMPLEX WITH ADP Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-637
3cf0G
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0G
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0N
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0N
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0C
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0C
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0J
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0J
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0F
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0F
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0M
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0M
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0B
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0B
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0I
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0I
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0E
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0E
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0L
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0L
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0A
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0A
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0H
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0H
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0D
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0D
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
343-637
3cf0K
16%
>target
---------------EIYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGR--GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVME--QQTISIAK---AGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRM-----VDIVEKEDVNEAIRLM--------------------
>3cf0K
ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-----FDKAR---QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM--STKKNVFIIGATNRPD-------------IIDPAILRPGRLDQLIYI-PLPDEKSRVAILK----ANLRKSP--------------------------VAKDVD------LEFLAKM------TNGFSGADLTEICQRACKLAIRESIESEIVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ
[Model]
1xxi: ADP BOUND E. COLI CLAMP LOADER COMPLEX Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-519
1xxiC
15%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxiC
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1xxiH
15%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxiH
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1xxiB
16%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG-----------VGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxiB
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCE---TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1xxiI
16%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG-----------VGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxiI
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCE---TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1xxiD
16%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG-----------VGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxiD
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCE---TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1xxiG
16%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG-----------VGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxiG
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCE---TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
3hu2: STRUCTURE OF P97 N-D1 R86A MUTANT IN COMPLEX WITH ATPGS Solved by: X-RAY, Resolution: 2.85A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
3hu2C
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG--ALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT------------------------------------------------------------------------------
>3hu2C
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNAVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLA------GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-----------KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSA
[Model]
343-538
3hu2F
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG--ALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT------------------------------------------------------------------------------
>3hu2F
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNAVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLA------GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-----------KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSA
[Model]
343-538
3hu2B
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG--ALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT------------------------------------------------------------------------------
>3hu2B
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNAVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLA------GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-----------KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSA
[Model]
343-538
3hu2E
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG--ALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT------------------------------------------------------------------------------
>3hu2E
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNAVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLA------GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-----------KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSA
[Model]
343-538
3hu2A
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG--ALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT------------------------------------------------------------------------------
>3hu2A
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNAVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLA------GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-----------KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSA
[Model]
343-538
3hu2D
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG--ALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT------------------------------------------------------------------------------
>3hu2D
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNAVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLA------GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-----------KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSA
[Model]
3h4m: AAA ATPASE DOMAIN OF THE PROTEASOME- ACTIVATING NUCLEOTIDA Solved by: X-RAY, Resolution: 3.11A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-637
3h4mC
16%
>target
-------------EIYGHEDVKKALLLLL--VGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD----RTAIHEVMEQQTISIAKAGI-LTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM-------
>3h4mC
AMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIR-VVGSELVKKFIGEGASLVKD-----IFKLAKE---KAPSIIFIDEIDAIAAKRTDALTGGDREVQ--RTLMQLLAEMDGFDARGDVKIIGATNRPD-------------ILDPAILRPGRFDRIIEV-PAPDEKGRLEILKIHTRKMN--------------------------LAE---DVNLE-------EI---AKM---TEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK
[Model]
343-637
3h4mB
16%
>target
-------------EIYGHEDVKKALLLLL--VGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD----RTAIHEVMEQQTISIAKAGI-LTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM-------
>3h4mB
AMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIR-VVGSELVKKFIGEGASLVKD-----IFKLAKE---KAPSIIFIDEIDAIAAKRTDALTGGDREVQ--RTLMQLLAEMDGFDARGDVKIIGATNRPD-------------ILDPAILRPGRFDRIIEV-PAPDEKGRLEILKIHTRKMN--------------------------LAE---DVNLE-------EI---AKM---TEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK
[Model]
343-637
3h4mA
16%
>target
-------------EIYGHEDVKKALLLLL--VGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD----RTAIHEVMEQQTISIAKAGI-LTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM-------
>3h4mA
AMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIR-VVGSELVKKFIGEGASLVKD-----IFKLAKE---KAPSIIFIDEIDAIAAKRTDALTGGDREVQ--RTLMQLLAEMDGFDARGDVKIIGATNRPD-------------ILDPAILRPGRFDRIIEV-PAPDEKGRLEILKIHTRKMN--------------------------LAE---DVNLE-------EI---AKM---TEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK
[Model]
3hu1: STRUCTURE OF P97 N-D1 R95G MUTANT IN COMPLEX WITH ATPGS Solved by: X-RAY, Resolution: 2.81A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-537
3hu1E
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI------------------------------------------------------------------------------
>3hu1E
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVGLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLAGESESNLRK-----AFEEA---EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS
[Model]
343-537
3hu1A
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI------------------------------------------------------------------------------
>3hu1A
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVGLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLAGESESNLRK-----AFEEA---EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS
[Model]
343-537
3hu1D
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI------------------------------------------------------------------------------
>3hu1D
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVGLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLAGESESNLRK-----AFEEA---EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS
[Model]
343-537
3hu1C
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI------------------------------------------------------------------------------
>3hu1C
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVGLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLAGESESNLRK-----AFEEA---EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS
[Model]
343-537
3hu1F
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI------------------------------------------------------------------------------
>3hu1F
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVGLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLAGESESNLRK-----AFEEA---EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS
[Model]
343-537
3hu1B
16%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL----LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD-----------RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI------------------------------------------------------------------------------
>3hu1B
LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVGLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRH--PALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLAGESESNLRK-----AFEEA---EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS
[Model]
3glg: CRYSTAL STRUCTURE OF A MUTANT (GAMMAT157A) E. COLI CLAMP LOADER BOUND TO PRIMER-TEMPLATE DNA Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-523
3glgG
16%
>target
--------------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPR--S--QYTTGRGSSG----VGLTAAVLR-DSVS--GE--L--TLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glgG
GLEVLFQGPHMSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGR--------I---HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATADPQ-------------KLPVTILSRCLQF-HLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glgD
15%
>target
---------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPR----SQYTTGRGSS------GVGLTAAVLRDSV--SG--E--LTLEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glgD
SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRI-----------HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL-IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATADPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM
[Model]
343-519
3glgI
15%
>target
---------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPR----SQYTTGRGSS------GVGLTAAVLRDSV--SG--E--LTLEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glgI
SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRI-----------HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL-IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATADPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM
[Model]
343-519
3glgC
16%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGV-----------GLTAAVLR-DSV--SGEL----TLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glgC
QVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNC---ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATADPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3glgH
16%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGV-----------GLTAAVLR-DSV--SGEL----TLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glgH
QVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNC---ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATADPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-520
3glgB
16%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPR----SQYTTGRGSS----GVGLTAAVLR-DSV--SGE----LTLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3glgB
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATADPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
3u5z: STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO THE T4PRIMER-TEMPLATE DNA, AND ATP ANALOG Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-537
3u5zL
16%
>target
----------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zL
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMF-VNGS-DCKI--DFVRGPL-TNFAS--AASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT-F-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-537
3u5zD
16%
>target
----------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zD
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMF-VNGS-DCKI--DFVRGPL-TNFAS--AASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT-F-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-537
3u5zN
16%
>target
----------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zN
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMF-VNGS-DCKI--DFVRGPL-TNFAS--AASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT-F-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-537
3u5zC
16%
>target
----------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zC
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMF-VNGS-DCKI--DFVRGPL-TNFAS--AASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT-F-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-537
3u5zM
16%
>target
----------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zM
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMF-VNGS-DCKI--DFVRGPL-TNFAS--AASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT-F-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-537
3u5zB
16%
>target
----------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zB
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMF-VNGS-DCKI--DFVRGPL-TNFAS--AASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT-F-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-527
3u5zE
16%
>target
--------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAV-----LRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDR-----------------------------------------------------------------------------------------------------------------------------------------------
>3u5zE
ITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKG--------K---IPHIILHSPSPGTGKTTVAKALCHDVNADMM---------FVNGSDCKIDFVRGPL-TNFASA--ASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCR-VITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-527
3u5zO
16%
>target
--------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAV-----LRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDR-----------------------------------------------------------------------------------------------------------------------------------------------
>3u5zO
ITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKG--------K---IPHIILHSPSPGTGKTTVAKALCHDVNADMM---------FVNGSDCKIDFVRGPL-TNFASA--ASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCR-VITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
1ofi: ASYMMETRIC COMPLEX BETWEEN HSLV AND I-DOMAIN DELETED HSLU (H. INFLUENZAE) Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
340-635
1ofiA
14%
>target
-----------IAPEIYGHEDVKKALLLLLV---GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS---GVGLTAAVLRDSVSGELTLEGGAL--VLADQGVCCIDEFDKMAEA-----DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMC--HERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLST----ALA-RLRMVD-IVEKEDVNEAIR-------------
>1ofiA
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVE-ATKFTEVGKEVDSIIR-----DLTDSAGGAIDAVEQNGIVFIDEIDKICKDVSREGVQRDLLPLVEGSTVSTK-HGMVKTD--HILFIASGAFQV---------ARPSDLIPELQGRLPIRVEL-TALSAADFERILTEPHA-----------------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTE------NIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
342-637
1ofiB
14%
>target
-------------PEIYGHEDVKKALLLLLV---GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGE--LTLEGGA--LVLADQGVCCIDEFDKMAEA-----DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR----L-STALARLRMVD-IVEKEDVNEAIRLM-----------
>1ofiB
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK-VEATK--------FTEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKVSREGVQRDLLPLVEGSTVSTKHGMVKTD---HILFIASGAFQV---------ARPSDLIPELQGRLPIRVEL-TALSAADFERILTEPHA-----------------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTE------NIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
337-611
1ofiC
16%
>target
--------AASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIR---GNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTA--AVLRDSVSGELTLEGGALVLA--DQGVCCIDEFDKMAEA------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR-------------------------------------------
>1ofiC
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKV-EATK---FTEVDSIIRD-----LTDSAGGAIDAVEQNGIVFIDEIDKICKADVSREGVQRDLLPLVEGSTVSTK-HGMVKTD--HILFIASGA-----FQVA----RPSDLIPELQGRLPIRVELT-ALSAADFERILTEP-----------------HASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTEN------IGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
3u60: STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO OPEN CAND ATP ANALOG Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-537
3u60B
16%
>target
---------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI---------------------------------------------------------------------------------------------------------------------------------------------------
>3u60B
MITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMF-VNG-SDCKI--DFVRGPL-TNFAS--AASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRV-ITFG-QPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-537
3u60D
16%
>target
---------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI---------------------------------------------------------------------------------------------------------------------------------------------------
>3u60D
MITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMF-VNG-SDCKI--DFVRGPL-TNFAS--AASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRV-ITFG-QPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-537
3u60C
16%
>target
----------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI---------------------------------------------------------------------------------------------------------------------------------------------------
>3u60C
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMF-VNGS-DCKI--DFVRGPL-TNFAS--AASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT-F-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-527
3u60E
16%
>target
--------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAV-----LRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDR-----------------------------------------------------------------------------------------------------------------------------------------------
>3u60E
ITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKG--------K---IPHIILHSPSPGTGKTTVAKALCHDVNADMM---------FVNGSDCKIDFVRGPL-TNFASA--ASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCR-VITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
2r44: CRYSTAL STRUCTURE OF PUTATIVE ATPASE (YP_676785.1) FROM CYTOPHAGA HUTCHINSONII ATCC 33406 AT 2.00 A RESOLUTION Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
331-640
2r44A
16%
>target
---------------DFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRS--QYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARA------SKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS------------------------------
>2r44A
GMELKSAEEKSLYYRNKIKEVIDEVGKVVVGQKYMINRLLIGICTGG-------------HILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLPSDLIGTMIYNQHKGNFEVKKGPVF---SNFILADEVNRSPAKVQSALLECMQEKQVTIG--DTTYPLDNPFLVLATQNPVEQE--------GTYPLPEAQVDRFMMK-IHLTYLDKESELEVMRRVSNMN----FNYQVQKIVSKNDVLEIRNEINKV--TISESLEKYIIELVFATRFPAEYGLEAEASYILYGASTRAAINLNRVAKAMAFFNNRDYVLPEDIKEVAYDILNHRIILNYEAEAEGISTRQIIETILRKVNITK
[Model]
3hu3: STRUCTURE OF P97 N-D1 R155H MUTANT IN COMPLEX WITH ATPGS Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
3hu3A
16%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKAL----LLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG--ALVLADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHIT------------------------------------------------------------------------------------
>3hu3A
LKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVHGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLR--HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLA------GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVD-IGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVV
[Model]
343-538
3hu3B
16%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVGG--VDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGV----GLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHIT-----------------------------------------------------------------------------
>3hu3B
LKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVHGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFL-INGPEIMSKLAGESESNLRKA-----FEEAE---KNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVDI-GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS
[Model]
1xxh: ATPGS BOUND E. COLI CLAMP LOADER COMPLEX Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-519
1xxhH
15%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxhH
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1xxhC
15%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxhC
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1xxhD
16%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG-----------VGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxhD
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCE---TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1xxhG
16%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG-----------VGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxhG
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCE---TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1xxhB
16%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG-----------VGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxhB
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCE---TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1xxhI
16%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG-----------VGLTAAVLR-DSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1xxhI
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCE---TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDP-------------QKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
3pvs: STRUCTURE AND BIOCHEMICAL ACTIVITIES OF ESCHERICHIA COLI M Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-539
3pvsC
14%
>target
-------------EIYGHEDVK--KALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEG-GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAA--NPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3pvsC
QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEA-------GH---LHSMILWGPPGTGKTTLAEVIARYANADVERIS--AVTSGVK--EIREA-----IERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTIT---------------FIGATTENPSF-------------ELNSALLSRARV-YLLK-SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
[Model]
343-539
3pvsB
15%
>target
-------------EIYGHEDVK--KALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAA--NPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3pvsB
QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEA-------GH---LHSMILWGPPGTGKTTLAEVIARYANADVERISAVTS---GV--KEIREAIE-RA---RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTIT---------------FIGATTENPSF-------------ELNSALLSRARV-YLLK-SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRY
[Model]
375-541
3pvsD
16%
>target
-------------------------------------IHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG-ALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAA--NPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3pvsD
QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTS--GV--KEIRE-----AIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTIT---------------FIGATTENPSF-------------ELNSALLSRARV-YLL-KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
[Model]
375-539
3pvsA
16%
>target
-------------------------------------IHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG-ALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAA--NPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3pvsA
QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERIS-A-VTSGV--KEIREA-----IERARQNRNAGRRTILFVDEVHRFA------FLPHIEDGTIT---------------FIGATTENPS-------------FELNSALLSRARV-YLLK-SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRY
[Model]
3u61: STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO CLOSEDAND ATP ANALOG AND ADP Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-533
3u61C
16%
>target
----------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRL------------------------------------------------------------------------------------------------------------------------------------------------------
>3u61C
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NG-SDCKI--DFVRGPL-TNFAS-A-ASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVI-TFG-QPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQW
[Model]
343-537
3u61D
16%
>target
----------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI---------------------------------------------------------------------------------------------------------------------------------------------------
>3u61D
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMF-VNGS-DCKI--DFVRGPL-TNFAS--AASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT-F-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
343-528
3u61E
16%
>target
-------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRS-QYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRD-------------------------------------------------------------------------------------------------------------------------------------
>3u61E
TVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGK-----------IPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGS---DCK--IDFVRGPLT-NFA--SAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT-F-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACE
[Model]
343-537
3u61B
16%
>target
--------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGD-PGVAKSQLLSYIDRLAPRSQ-YTTGRGSSGVGLTAAVLRDSVSGELTLEGGAL-VLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI--------------------------------------------------------------------------------------------------------------------------------------
>3u61B
ITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKG--------K---IPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNG---SDCKI--DFVRGPLT-NF---ASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVI-TFG-QPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQW
[Model]
1e32: STRUCTURE OF THE N-TERMINAL DOMAIN AND THE D1 AAA DOMAIN OMEMBRANE FUSION ATPASE P97 Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-537
1e32A
16%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALL--LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA--------DR---TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI--------------------------------------------------------------------------
>1e32A
NRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI-NGPEIMSKLAGESESNLRK-----AFEEA---EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMD---------GL--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVD-IGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ
[Model]
3nbx: CRYSTAL STRUCTURE OF E. COLI RAVA (REGULATORY ATPASE VARIACOMPLEX WITH ADP Solved by: X-RAY, Resolution: 2.91A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
333-635
3nbxX
16%
>target
--------YEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSG--ELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAAN-PAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHS-RQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3nbxX
HPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGE-------------SVFLLGPPGIAKSLIARRLKFAFQNARAFE------YLMTRFSTPEEVFGPLSERLTSGYLPEAE--IVFLDEIWKAGPAILNTLLTAINERQFRN--GAHVEKIPMRLLVAASNELPEADS------------SLEALYDRML-IRLWLDKVQDKAN---FRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIG--EITLPDHVFELIFM----LRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLSKGGEIRGKLNGIGFAQKLNLEVDSAQHLVVRDVSLQGSTLALPGSLPGEIKQQLEELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQ
[Model]
1s3s: CRYSTAL STRUCTURE OF AAA ATPASE P97/VCP ND1 IN COMPLEX WITP47 C Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-537
1s3sE
14%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVGG--VDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGE--LTLEG--GALVLADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI--------------------------------------------------------------------------
>1s3sE
PNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI-NGPEIMS--------KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-----------KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ
[Model]
343-537
1s3sA
14%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVGG--VDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGE--LTLEG--GALVLADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI--------------------------------------------------------------------------
>1s3sA
PNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI-NGPEIMS--------KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-----------KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ
[Model]
343-537
1s3sD
14%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVGG--VDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGE--LTLEG--GALVLADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI--------------------------------------------------------------------------
>1s3sD
PNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI-NGPEIMS--------KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-----------KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ
[Model]
343-537
1s3sB
14%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVGG--VDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGE--LTLEG--GALVLADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHI--------------------------------------------------------------------------
>1s3sB
PNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI-NGPEIMS--------KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-----------KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREV-DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ
[Model]
343-535
1s3sF
14%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVGG--VDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQ----------------------------------------------------------------------------
>1s3sF
KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN-GPEIMSKLAGESES-NLRKAFEEA---EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVD-IGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ
[Model]
343-536
1s3sC
15%
>target
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVGG--VDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQH---------------------------------------------------------------------------
>1s3sC
RPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLR-----KAFEEA---EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L--KQRAHVIVMAATNRPN-------------SIDPALRRFGRFDREVD-IGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ
[Model]
1ixs: STRUCTURE OF RUVB COMPLEXED WITH RUVA DOMAIN III Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-638
1ixsB
15%
>target
---------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGAL--VLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKA--G--ILTTLN-ARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLME-------------------------------------------------------------------------------
>1ixsB
LALRPKTLDEYIGQERLKQKLRVYLEAAKARK------EPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTS----GP-----AIEKP--GDL---AAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPG-------------LITAPLLSRFGIVEHL-EYYTPEELAQGVMRD----------------------------ARLLGVRITEEAALEIGRR-------S-------RGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDELGLEKRDREILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPRGRVATELAYRHLGYPPPV
[Model]
1j7k: THERMOTOGA MARITIMA RUVB P216G MUTANT Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-638
1j7kA
15%
>target
-------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRG--NIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGR-GSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLME------------------------------------------------------------------------------
>1j7kA
LRPKSLDEFIGQENVKKKLSLALEAAK--------MRGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAAIL--------------TSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIIDI-------QPFTLVGATTRS-------------GLLSSPLRSRFGIILEL-DFYTVKELKEIIKRAAS----------------------------LMDVEIEDAAAEMIAKRS--------------RGTGRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
1in6: THERMOTOGA MARITIMA RUVB K64R MUTANT Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-638
1in6A
15%
>target
---------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGN--IHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLME------------------------------------------------------------------------------
>1in6A
QFLRPKSLDEFIGQENVKKKLSLALEAAK--------MRGEVLDHVLLAGPPGLGRTTLAHIIASELQTNIHVTSGPVLVKQGDMAAIL--------------TSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIDI--------QPFTLVGATTRSG-------------LLSSPLRSRFGIILEL-DFYTVKELKEIIKRAASL----------------------------MDVEIEDAAAEMIAKRS--------------RGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
2r65: CRYSTAL STRUCTURE OF HELICOBACTER PYLORI ATP DEPENDENT PROTEASE, FTSH ADP COMPLEX Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-637
2r65D
15%
>target
-----------EIYGHEDVKKALL--LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEG-GALVLA-DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM------
>2r65D
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPERY-ANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMFV------GLGASRVRDLFETAKKQAPSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILKVHIK----------------------------GVK--LANDVN------LQEVAKL------TAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK
[Model]
343-637
2r65C
15%
>target
-----------EIYGHEDVKKALL--LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEG-GALVLA-DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM------
>2r65C
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPERY-ANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMFV------GLGASRVRDLFETAKKQAPSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILKVHIK----------------------------GVK--LANDVN------LQEVAKL------TAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK
[Model]
343-637
2r65B
15%
>target
-----------EIYGHEDVKKALL--LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEG-GALVLA-DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM------
>2r65B
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPERY-ANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMFV------GLGASRVRDLFETAKKQAPSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILKVHIK----------------------------GVK--LANDVN------LQEVAKL------TAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK
[Model]
343-637
2r65E
15%
>target
-----------EIYGHEDVKKALL--LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEG-GALVLA-DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM------
>2r65E
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPERY-ANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMFV------GLGASRVRDLFETAKKQAPSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILKVHIK----------------------------GVK--LANDVN------LQEVAKL------TAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK
[Model]
343-637
2r65A
15%
>target
-----------EIYGHEDVKKALL--LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEG-GALVLA-DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM------
>2r65A
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPERY-ANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMFV------GLGASRVRDLFETAKKQAPSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILKVHIK----------------------------GVK--LANDVN------LQEVAKL------TAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK
[Model]
2x8a: HUMAN NUCLEAR VALOSIN CONTAINING PROTEIN LIKE (NVL), C- TERMINAL AAA-ATPASE DOMAIN Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
344-638
2x8aA
15%
>target
IYGHEDVKKALLLLLV--GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGE--LTLEGGALVLA---DQGVCCIDEFDKMAEADR--TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLME---
>2x8aA
IGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFIS-VKGP---EL-----LNMYVGESERAVR-QVFQRAKNSAPCVIFFDEVDALCPSVRVVNQLLTEMD---------GLE--ARQQVFIMAATNRPD-------------IIDPAILRPGRLDKTL-FVGLPPPADRLAILKTITKNGTK---------------------------PPL---DADVNLEAIAGDL-------RCDCYTGADLSALVREASICALRQEMLKVSHKHFEEAFKKVRSSI
[Model]
1ixz: CRYSTAL STRUCTURE OF THE FTSH ATPASE DOMAIN FROM THERMUS THERMOPHILUS Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-634
1ixzA
15%
>target
---------EIYGHEDVKKALL--LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLA---DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGIL-TTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAI-
>1ixzA
TEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHE-MGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITAS----GSDFVEMFVGV---GAARVR-DLFETAKRHAPCIVFIDEIDAVGRNDER-------EQTLNQLLVEMDGFEKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGK----PL----------------------AE---DVDLA-------LLAKR------TPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAAS
[Model]
3eih: CRYSTAL STRUCTURE OF S.CEREVISIAE VPS4 IN THE PRESENCE OF ATPGAMMAS Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
3eihC
17%
>target
-----------EIYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGAL-----V---LADQGVCCIDEFDKMAEADR------TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT-----------------------------------------------------------------------------------------------------------------------------
>3eihC
ILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGN-RKPTSGILLYGPPGTGKSYLAKAVATEANSTFF-SVSSSD---LV---------SKWMGESEKLVKQLFAMARENKPSIIFIDQVDALTGESEASRRIKTELLVQMN---------GVGN-DSQGVLVLGATNIPW-------------QLDSAIRRRFERRI-YIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQEGN
[Model]
343-537
3eihA
15%
>target
---------------EIYGHEDVKKALLLLLVG--GVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQY-TTGRG--SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI------------------------------------------------------------------------------------------------------------------------------
>3eihA
LSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGN-RKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQL----F-AMAR---ENKPSIIFIDQVDALTGTRGEGESEASRRIKTELLVQMNG----V-----GN-DSQGVLVLGATNIPW-------------QLDSAIRRRFERRI-YIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQEGN
[Model]
343-538
3eihB
15%
>target
--------------EIYGHEDVKKALLLLLVGGV--DQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG----VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAE-----------ADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT---------------------------------------------------------------------------------------------------------------------------
>3eihB
SSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGN-RKPTSGILLYGPPGTGKSYLAKAVATEANSTFF-SVSSSDLVSKWMGESEKLVKQL----F-AMAR---ENKPSIIFIDQVDALTGTRGEGESEASRRIKTELLVQMNG----V-----GN-DSQGVLVLGATNIPW-------------QLDSAIRRRFERRI-YIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQE
[Model]
3vfd: HUMAN SPASTIN AAA DOMAIN Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-538
3vfdA
15%
>target
-------------------EIYGHEDVKKALLLLLVG--GVDQS--PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIH---EVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT---------------------------------------------------------------------------------------
>3vfdA
LANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPAR---GLLLFGPPGNGKTMLAKAVAAESNATFFN-ISA---ASLGEKLVRAL-----FAVAR---ELQPSIIFIDQVDSLLDASRRLKTEFLIEFDG-------------V-QRVLVMGATNRPQ-------------ELDEAVLRRFIKRVY-VSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPENMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG
[Model]
1iy2: CRYSTAL STRUCTURE OF THE FTSH ATPASE DOMAIN FROM THERMUS THERMOPHILUS Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-634
1iy2A
15%
>target
---------------EIYGHEDVKKALL--LLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALV---LADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAI-
>1iy2A
SRARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGA--RIPKGVLLVGPPGVGKTHLARAVAGEARVPFITAS----GSDFVEMFV---GVGAARVR-DLFETAKRHAPCIVFIDEIDAVGRKNDE-REQTLNQLLVEM--DGF--EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGK----P----------------------LAEDVD----------LALLAKRT------PGFVGADLENLLNEAALLAAREGRRKITMKDLEEAAS
[Model]
2chv: REPLICATION FACTOR C ADPNP COMPLEX Solved by: X-RAY, Resolution: 4.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-519
2chvC
15%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA----PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvC
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERKN-----------IPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYVS-------------RIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
343-519
2chvF
15%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA----PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvF
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERKN-----------IPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYVS-------------RIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
343-519
2chvB
15%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA----PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvB
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERKN-----------IPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYVS-------------RIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
343-519
2chvE
15%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA----PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvE
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERKN-----------IPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYVS-------------RIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
343-519
2chvA
15%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA----PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvA
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERKN-----------IPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYVS-------------RIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
343-519
2chvD
15%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA----PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvD
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERKN-----------IPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYVS-------------RIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
2r62: CRYSTAL STRUCTURE OF HELICOBACTER PYLORI ATP DEPENDENT PROTEASE, FTSH Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-636
2r62A
15%
>target
-----------EIYGHEDVKKALLLLL--VGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEG-GALVLA-DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRL------
>2r62A
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPERY-ANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMF---VGL---GASRVRDLFETAKKQAPSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILKVHIKG----------------------------VK--LANDVN---------LQEVAKL---TAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLE
[Model]
343-636
2r62B
15%
>target
-----------EIYGHEDVKKALLLLL--VGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEG-GALVLA-DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRL------
>2r62B
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPERY-ANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMF---VGL---GASRVRDLFETAKKQAPSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILKVHIKG----------------------------VK--LANDVN---------LQEVAKL---TAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLE
[Model]
3gli: CRYSTAL STRUCTURE OF THE E. COLI CLAMP LOADER BOUND TO PRIMER-TEMPLATE DNA AND PSI PEPTIDE Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
342-519
3gliG
16%
>target
-------------------------PEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQYT----TGRGSSG----VGLTAAVL-RDSVSGE------LTLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3gliG
GLEVLFQGPHMSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM
[Model]
343-519
3gliH
15%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3gliH
QVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3gliC
15%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3gliC
QVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
3gliD
16%
>target
---------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSS------GVGLTAAVLRDSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3gliD
SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRI-----------HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL-IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM
[Model]
343-519
3gliI
16%
>target
---------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSS------GVGLTAAVLRDSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3gliI
SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRI-----------HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL-IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM
[Model]
343-519
3gliB
15%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSSG----VG-LTAAVLRDSV--SGE--L--TL-E-GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3gliB
VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM
[Model]
2c9o: 3D STRUCTURE OF THE HUMAN RUVB-LIKE HELICASE RUVBL1 Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-645
2c9oC
13%
>target
-------------------------------EIYGHEDVKKALLL--LLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA-PRSQYTTGRGSSG----VGLTAAV--------------------LR-------D------SVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLL----
>2c9oC
KSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKS------K--KMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKKKEIIQDVTLHDLDVAGEINKVVNKYID--QGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAP--------------IVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVM-IIRTML-YTPQEMKQIIKIR----------------------------AQTEGINISEEALNHLGEIG-------------TKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILAD
[Model]
439-645
2c9oB
15%
>target
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH-ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLL---
>2c9oB
TTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCSHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIV---IFASNRGNCVIRGTEDI-----------TSPHGIPLDLLDRV-MIIRTMLYT------------------------------PQEMKQIIKIRAQTEGINISEEALNHLGEIGT-------K------TTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILA
[Model]
439-646
2c9oA
15%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMC-HERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLLG---
>2c9oA
TTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPI---VIFASNRGNCVIRGTED-----------ITSPHGIPLDLLDRV-MIIRTMLYT------------------------------PQEMKQIIKIRAQTEGINISEEALNHLGEIGT-------------KTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILAD
[Model]
3d8b: CRYSTAL STRUCTURE OF HUMAN FIDGETIN-LIKE PROTEIN 1 IN COMPLEX WITH ADP Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-637
3d8bA
12%
>target
----------------------------EIYGHEDVKKALLLLLVGGVD--QS--PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGE--LTLEG---GALVLADQGVCCIDEFDKMAEA--D---RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMV--DIVEKEDVNEAIRLM-----------------------
>3d8bA
ERLKNLEPKMIELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPK---GILLFGPPGTGKTLIGKCIASQSGATFFS-ISASS---L-----TSKWVGEGEKMVRALFAVA-RCQQPAVIFIDEIDSLLSQESSRRIKTEFLVQLDG-------------SEDRILVVGATNRPQ-------------EIDEAARRRLVKRLY-IPLPEASARKQIVINLMSKE----------------------------QCCLSEEEIEQIV----------QQ---SDAFSGADMTQLCREASLGPIRSLQTVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFGCGK
[Model]
343-538
3d8bB
15%
>target
-----------------------EIYGHEDVKKALLLLLVGGVD--QSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEA--DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHIT-----------------------------------------------------------------------------------------
>3d8bB
LEPKMIELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR-GPPKGILLFGPPGTGKTLIGKCIASQSGATFFS-ISASS---LTEG---EKMVRALFAVARC---QQPAVIFIDEIDSLLSSRRIKTEFLVQLDG-------------AEDRILVVGATNRPQ-------------EIDEAARRRLVKRLY-IPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTAATITPDQVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFGC
[Model]
2chq: REPLICATION FACTOR C ADPNP COMPLEX Solved by: X-RAY, Resolution: 4.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-519
2chqC
15%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA----PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chqC
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERKN-----------IPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYVS-------------RIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
343-519
2chqB
15%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA----PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chqB
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERKN-----------IPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYVS-------------RIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
343-519
2chqA
15%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA----PRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chqA
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERKN-----------IPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYVS-------------RIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
1jr3: CRYSTAL STRUCTURE OF THE PROCESSIVITY CLAMP LOADER GAMMA COMPLEX OF E. COLI DNA POLYMERASE III Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-519
1jr3C
15%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1jr3C
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1jr3A
15%
>target
--------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRS----QYTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1jr3A
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGR----------I-HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
343-519
1jr3B
15%
>target
-------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIH-ICLMGDPGVAKSQLLSYIDRLAPRSQ----YTTGRGSS----GVGLTAAVLR-DSV--SGE--L--TLEG--GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1jr3B
QVLARKWRPQTFADVVGQEHVLTALANGLSLGR-----------IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVKFLLATTDPQ-------------KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
[Model]
3uk6: CRYSTAL STRUCTURE OF THE TIP48 (TIP49B) HEXAMER Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-646
3uk6G
12%
>target
--------------------------------------EIYGHEDVKKALLLLL--VGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR-SQYTTGRGS----SGVGLT-------------------------AAVLRD--------SVSG---------------ELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLLG--
>3uk6G
TTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIRE-------GK-IAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKATVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEW-REE--GAEIIPGVLFIDEVHMLDIESFSFLNRALESDMA--------------PVLIMATNRGITRIRGT-SYQSPHGIPIDLLDRLLIVS-T-TPYSEKDTKQILRIRCE----------------------------EEDVEMSEDAYTVLTRI-------G------LETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
342-645
3uk6H
12%
>target
--------------PEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGR----GSSGVGLTAA--------------VLRDSVSGELT------LE--GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLL---
>3uk6H
IGAHSHIREPRQASQGMVGQLAARRAAGVVLEMI----------R---AVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVTVSLHEIDVINSFSEIKSEVREQINAKVAEWIPGVLFIDEVHMLDIESFSFLNRALESDMAPV--------------LIMATNRGITRIRGT-SYQSPHGIPIDLLDRLLIVSTT--PYSEKDTKQILRIRCE----------------------------EEDVEMSEDAYTVLTRI-------G------LETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
343-645
3uk6C
11%
>target
-----------------------------------EIYGHEDVKKALLLL--LVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGRGSS--G--VGLT-----------------------AAVLRDSV------------------SGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLL---
>3uk6C
TKVPEDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIRE------G--KIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRITVSLHEIDVINSRTQGFLALFEIKSEVREQINAKVAEW--REEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMA--------------PVLIMATNRGITRIRG-TSYQSPHGIPIDLLDRLLI-VSTT-PYSEKDTKQI----LRIR------------------------CEEEDVEMSEDAYTVLTRIGL-------------ETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
341-644
3uk6A
12%
>target
-------------------APEIYGHEDVKKALL--LLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ---YTTGRG--SSGVGLTAAV------------LR-----DSVSGELTLE-------------GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSL----
>3uk6A
AHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREG-K-------IAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRITVSLHEIDVINSFLALFKSEVREQINAKVAEWREEGKIPGVLFIDEVHMLDIESFSFLNRALESDMA--------------PVLIMATNRGITRIR-GTSYQSPHGIPIDLLDRLLI-VS-TTPYSEKDTKQILRIRC----------------------------EEEDVEMSEDAYTVLTRIG--------L-----ETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
343-646
3uk6E
13%
>target
----------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRS-QYTTGRGSSG----VGLT----AAVLRDSV--SGELTLE---------------GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLLG--
>3uk6E
GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL-EMIRE---G-KI-AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGTVSLHEIDVINSRTEIEVREQINAKVAEWREIPGVLFIDEVHMLDIESFSFLNRALESDMAP--------------VLIMATNRGITRIR-GTSYQSPHGIPIDLLDRLLIVS--TTPYSEKDTKQILRIRCE----------------------------EEDVEMSEDAYTVLTRIG-------L------ETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
343-645
3uk6D
13%
>target
--------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGRGSS--GVGL--TAA-------------VLRDS------VSGEL--------------TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLL--
>3uk6D
GAHSHIRGLDDALEPRQASQGMVGQLAARRAAGVVLE-MIRE---G-KI-AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIVSLHEIDVINSRTQGFFSGDTGEIKSEVREQINAKVAEWIIPGVLFIDEVHMLDIESFSFLNRALESDMA--------------PVLIMATNRGITRIRGT-SYQSPHGIPIDLLDRL-LIVS-TTPYSEKDTKQILRIR----------------------------CEEEDVEMSEDAYTVLTRIGL-------------ETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYM
[Model]
343-643
3uk6F
12%
>target
----------------------EIYGHEDVKKALLL--LLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGRGSS----GVGLTA----------AV--LRDSVS------GE-------LTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDS--------------
>3uk6F
GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIRE-------GKI-AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIVHTVSLHEIDVINEIKSEVREQINAKVAEWRIIPGVLFIDEVHMLDIESFSFLNRALESD--------------MAPVLIMATNRGITRIRGTS-YQSPHGIPIDLLDRLLIV-STT-PYSEKDTKQILRIRCE----------------------------EEDVEMSEDAYTVLTRIG-------------LETSLRYAIQLITAASLVC--RKRKEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFN
[Model]
343-644
3uk6I
11%
>target
------------------EIYGHEDVKKALLL--LLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR-SQYTTGRGSSGV----GLTAAV-----------------------LRDSVSGE----------LTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSL-----
>3uk6I
GAHSHIRGLALEPRQASQGMVGQLAARRAAGVVLEMIREG--------KIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSISLHEIDVINSRTQGFLALFSGGEIKSEVREQINAKVAEWREEGIIPGVLFIDEVHMLDIESFSFLNRALESDMAP--------------VLIMATNRGITRIRG-TSYQSPHGIPIDLLDRLLIVS-T-TPYSEKDTKQILRIRC----------------------------EEEDVEMSEDAYTVLTRIG-------------LETSLRYAIQLITAASLVG-----TEVQVDDIKRVYSLFLDESRSTQYMKE
[Model]
343-646
3uk6B
11%
>target
----------------------EIYGHEDVKKALLLL--LVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR-SQYTTGRGSSG----VGLTA----------------AV-LRDS------VSGELTL-------------EGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLLG--
>3uk6B
GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIR---E---G--KIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIVHTVSLHEIDVINSRFLALFSGDTGEIKSEVREQINAKVAEWIIPGVLFIDEVHMLDIESFSFLNRALESD--------------MAPVLIMATNRGITRIRG-TSYQSPHGIPIDLLDRL-LIVST-TPYSEKDTKQILRIRCE----------------------------EEDVEMSEDAYTVLTRIG-------L------ETSLRYAIQLITAASLVC-----REVQVDDIKRVYSLFLDESRSTQYMK
[Model]
343-635
3uk6J
12%
>target
----------------------------------EIYGHEDVKKAL--LLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRS-QYTTGRGSS----GVGLT--------------AAVL-R--D---------SVSGELT-------LEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIR-
>3uk6J
TKVPEVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIRE-------GK-IAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRITVSLHEIDVINSRTFLALFTGEIKSEVREQINAKVAEWRIIPGVLFIDEVHMLDIESFSFLNRALESDM--------------APVLIMATNRGITRIRGT-SYQSPHGIPIDLLDRLLIVS--TTPYSEKDTKQ----ILRIRC------------------------EEE--DMSEDAYTVLTRIG-------------LETSLRYAIQLITAASLVCRKRKRVYSLFLDESRSTQY
[Model]
341-645
3uk6K
13%
>target
--------------------APEIYGHEDVKKAL--LLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLA-PRSQYTTGRGSS----GVGLTAA---VLRDSV-SGELT-LE----------------GGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLL---
>3uk6K
GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIR---E---G---KAGRAVLIAG-Q-TGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQFRRSIGVRIKVSLHEIDVINSREIVREQINAKVAEWREEPGVLFIDEVHMLDIESFSFLNRALESDMA--------------PVLIMATNRGITRIR-GTSYQSPHGIPIDLLDRL-LIVSTTPYSEKD-TKQILRIR----------------------------CEEEDVEMSEDAYTVLTRIG------L-------ETSLRYAIQLITAASLVCR----KRKQVDDIKRVYSLFLDESRSTQYMK
[Model]
376-521
3uk6L
15%
>target
---------------------HICLMGDPGVAKSQLLSYIDRLA----PRSQYTTGRGS----------SGVGLTAAVLRDSVSGELTLEGG---ALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLI----------------------------------------------------------------
>3uk6L
DDALEAARRAAGVVLEMIRGRAVLIAGQPGTGKTAIAMGMAQALTAIAGSEIFEMSKTEALTQAFRRRISLHEIDVINSRTEIKSEVREQINAKVAEWREIPGVLFIDEVHMLDIESFSFLNRALESDM-------------AP-VLIMATNRGITRIRGT-SYQSPHGIPIDLLDRL-LIVSTTPYSEKDTKQILRIRCEEEMSTRIGLETSLRYAIQLSLVEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
1iy0: CRYSTAL STRUCTURE OF THE FTSH ATPASE DOMAIN WITH AMP-PNP FROM THERMUS THERMOPHILUS Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-634
1iy0A
15%
>target
---------EIYGHEDVKKALL--LLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLA---DQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAI-
>1iy0A
TEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGA--RIPKGVLLVGPPGVGKTHLARAVAGEARVPFITAS----GSDFVEMFVGV---GAARVR-DLFETAKRHAPCIVFIDEIDAVGRKRNDEREQTLNQLLVEMD----GFEKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGK----P----------------------LAEDV---DLALL------AKR-------TPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAAS
[Model]
1iy1: CRYSTAL STRUCTURE OF THE FTSH ATPASE DOMAIN WITH ADP FROM THERMUS THERMOPHILUS Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-634
1iy1A
15%
>target
-----EIYGHEDVKKALL--LLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGE--LTLEGGALV---LADQGVCCIDEFDKMAEADRT-----AIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALL--SRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAI-
>1iy1A
KVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGA--RIPKGVLLVGPPGVGKTHLARAVAGEARVPFITAS----GSDFV-----EMFVGVGAARVR-DLFETAKRHAPCIVFIDEIDAVGRNDEREQTLNQLLVEMDG----F-------EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHAR----GKP----------------------LAEDVD-------LALLA--KR-------TPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAAS
[Model]
1iqp: CRYSTAL STRUCTURE OF THE CLAMP LOADER SMALL SUBUNIT FROM PYROCOCCUS FURIOSUS Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-536
1iqpC
14%
>target
-----------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR----SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH---------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpC
KVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGS-----------MPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDER--GINVIREKV-KEFA-RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYSS-------------KIIEPIQSRCAIFR-F-RPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
338-528
1iqpA
14%
>target
---------------ASIAP----EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAA------VLRDSVSGELTLEGGALVLAD--QGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRD-----------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpA
SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTG--------S---MPHLLFAGPPGVGKTTAALALAREL----FGENWRHNFLELNASDERGINVIREKV-KEFA---RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIF-RF-RPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
338-528
1iqpD
14%
>target
---------------ASIAP----EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAA------VLRDSVSGELTLEGGALVLAD--QGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRD-----------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpD
SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTG--------S---MPHLLFAGPPGVGKTTAALALAREL----FGENWRHNFLELNASDERGINVIREKV-KEFA---RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIF-RF-RPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
338-528
1iqpF
14%
>target
---------------ASIAP----EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAA------VLRDSVSGELTLEGGALVLAD--QGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRD-----------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpF
SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTG--------S---MPHLLFAGPPGVGKTTAALALAREL----FGENWRHNFLELNASDERGINVIREKV-KEFA---RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIF-RF-RPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
338-528
1iqpB
14%
>target
---------------ASIAP----EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAA------VLRDSVSGELTLEGGALVLAD--QGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRD-----------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpB
SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTG--------S---MPHLLFAGPPGVGKTTAALALAREL----FGENWRHNFLELNASDERGINVIREKV-KEFA---RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIF-RF-RPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
338-528
1iqpE
14%
>target
---------------ASIAP----EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAA------VLRDSVSGELTLEGGALVLAD--QGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRD-----------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpE
SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTG--------S---MPHLLFAGPPGVGKTTAALALAREL----FGENWRHNFLELNASDERGINVIREKV-KEFA---RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIF-RF-RPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
2c9c: STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
373-631
2c9cA
14%
>target
--------------------GNIHICLMGDPGVAKSQLLSYIDRLAPRSQ--YTTGRGSSGVGLTAAVLRDS-VS----G-ELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAM-CHE----RQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVN-------
>2c9cA
LLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFIS--------LNCAALNENLLDSELFGHEAKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELER--VGGSQPLQVNVRLVCATNAD------LPAMVNEGTFRADLLDRLAFDVVQL-PPLRERESD---------------------I-MLMAEYFAIQMCREIKLPLFPGFTERARETLLNYR-------------WPGNIAELKNVVERSV---YRHGTSDYPLDDIIIDPFKRR
[Model]
1in8: THERMOTOGA MARITIMA RUVB T158V Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-639
1in8A
14%
>target
---------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEM-----------------------------------------------------------------------------
>1in8A
QFLRPKSLDEFIGQENVKKKLSLALEAAKMR---G---EVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAAI--------------LTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDI----------QPFTLVGATVRSG-------------LLSSPLRSRFGIILELD-FYTVKELKEIIKRAA----------------------------SLMDVEIEDAAAEMIAKR-------S-------RGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
2p65: CRYSTAL STRUCTURE OF THE FIRST NUCLEOTIDE BINDING DOMAIN OCHAPERONE CLPB1, PUTATIVE, (PV089580) FROM PLASMODIUM VIV Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
341-525
2p65A
14%
>target
------------------APEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAP-RSQYTTGRG-----SSGVGLTAAVLRDSVSGELT--LEGG--ALVLAD-QGVCCIDEFDKMAEA---------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRP-
>2p65A
QALEKYSRDLTALARAGKLDPVIGRDTEIRRAIQILSRR-----------TKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDLSSLIAGAK---YRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLAR---------------GELRCIGATTVSEY--------RQFIEKDKALERRFQQIL--VEQPS
[Model]
2c98: STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
373-631
2c98A
14%
>target
--------------------GNIHICLMGDPGVAKSQLLSYIDRLAPRSQ--YTTGRGSSGVGLTAAVLRDS--VSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIA-MCHER----QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVN------
>2c98A
LLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCA---ALNENLLDSELFGHEAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELE--RVGGSQPLQVNVRLVCATNAD------LPAMVNEGTFRADLLDRLAFDVVQL-PPLRERESD---------------------I-MLMAEYFAIQMCREIKLPLFPGFTERARETLLNY-------------RWPGNIRELKNVVERSV---YRHGTSDYPLDDIIIDPFKR
[Model]
1in4: THERMOTOGA MARITIMA RUVB HOLLIDAY JUNCTION BRANCH MIGRATIOMOTOR Solved by: X-RAY, Resolution: 1.60A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-639
1in4A
14%
>target
---------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTT-GRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEM-----------------------------------------------------------------------------
>1in4A
QFLRPKSLDEFIGQENVKKKLSLALEAAKMRG------EVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMA--------------AILTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDI----------QPFTLVGATTRSG-------------LLSSPLRSRFGIILEL-DFYTVKELKEIIKRAAS----------------------------LMDVEIEDAAAEMIAKRS--------------RGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
1lv7: CRYSTAL STRUCTURE OF THE AAA DOMAIN OF FTSH Solved by: X-RAY, Resolution: 1.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-637
1lv7A
14%
>target
------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGE--LTLEGGALVL--AD-QGVCCIDEFDKMAEAD---RTAIHEVMEQQTISIAKAGI-LTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLS--RFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLM----
>1lv7A
MLTEDQIKTTFADVAGCDEAKEEVAELV-EYL-REPSR--FKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTI-S---GSDFV-----EMFVGVGASRVR-DMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQ-TLNQMLVEMDGFEGNEGIIVIAATNRPD-------------VLDPALLRPGRFDRQV-VVGLPDVRGREQILKVHMRRV----P----------------------LAPD---ID-------AAIIARG------TPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGL
[Model]
3sc3: CRYSTAL STRUCTURE OF A PUTATIVE DNA REPLICATION REGULATOR (SAMA_1916) FROM SHEWANELLA AMAZONENSIS SB2B AT 3.00 A RE Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
375-636
3sc3A
12%
>target
----------------------IHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEAD--RTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDL--LWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRL
>3sc3A
YPAAGNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANE-----------LERRSFYIPLGIHAS-ISTALLEGLEQFDLICIDDVDAVAGHPLWEEAIFDLYNRV-AE----------QKRGSLIVSASASPMEAG---------FVLPDLVSRMHWGLTYQ-LQPMMDDEKLAALQRR----------------------------AAMRGLQLPEDVGRFLLNRM--------------ARDLRTLFDVLDRLDKASMVHQ-RKLTIPFVKEMLRL
[Model]
375-636
3sc3B
14%
>target
---------------------IHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRT--A----IHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDL--LWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRL
>3sc3B
PAAGNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANEL------ERRSFYIPLGI-HA-SISTALLE----GLEQFDLICIDDVDAVAGHPLWEEAIFDLYNRVAEQKR------G--------SLIVSASASP-MEAG---------FVLPDLVSRMHWGLTYQ-LQPMMDDEKLAALQRR----------------------------AAMRGLQLPEDVGRFLLNRM------A--------RDLRTLFDVLDRLDKASMVHQ-RKLTIPFVKEMLRL
[Model]
1ixr: RUVA-RUVB COMPLEX Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-700
1ixrC
14%
>target
--------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGAL--VLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKA----GILTTLN-ARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMSKDSLLGEKGQTARTQRPADVIFATIRELVSRGRSVHFSEAEQRCISRGFTPAQFQAALDE-------------------------
>1ixrC
ALRPKTLDEYIGQERLKQKLRVYLEAAKARK------EPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSG----P-----AIEKP--GDL---AAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPG-------------LITAPLLSRFGIVEHL-EYYTPEELAQGVMRD----------------------------ARLLGVRITEEAALEIGRR-------S--R-----GTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGL------DELGLE-----KRDREILEVLILRFGGGPVGLATLATAL---SEDPGTLEEVHEPYLIRQGLLKRTPRGRVATELARRHL
[Model]
3hws: CRYSTAL STRUCTURE OF NUCLEOTIDE-BOUND HEXAMERIC CLPX Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
338-623
3hwsF
15%
>target
---------ASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGN---IHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVS---GELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY---GRYNPR------R-----SLEQ-------NVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMC--HERQPTVPESLADYITAA-YVEMRREARASKDATYTSARTLLAILR--LSTALARLRMVD-----------------------
>3hwsF
ALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKNILLIGPTGSGKTLLAETLARLLDVPFTM-ADATT---LTGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSRDVSGEGVQQALLKLIEGTVA-AV-PEFLQVDTSKILFICGGAFAGLDKVISHRASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATL-NELSEEALIQILKEPK-----------------NALTKQYQALFNLEGVDLEFRDEALDAIAKKAM--------A----RKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIYG
[Model]
336-627
3hwsB
15%
>target
--------LAASIAPEIYGHEDVKKALLLLLVGGVDQSP----QGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRGSSGVGLTAAVLRDSVSGE----LTLEGGALVLADQGVCCIDEFDKMA-EADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYG-------RYNPRR--SLEQ--------NVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR--LSTALARLRMVDIVEK-------------------
>3hwsB
SALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVG---EDV-ENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISREGVQQALLKLIEGTRKHPQ--QEFLQVDTSKILFICGGAFAGLDKVISHRVETASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATL-NELSEEALIQILK----EPK-------------NALTKQYQALFNLEGVDLEFRDEALDAIAKKA-------MA----RKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIYG
[Model]
339-630
3hwsD
14%
>target
-----------SIAPEIYGHEDVKKALLLLLVGGVDQS----PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADR----TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY------GRYN---PRRSLEQ--------NVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMC--HERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR--LSTALARLRMVDIVEKEDV-----------------
>3hwsD
SALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRVSGEGVQQALLKLIEGTVAAVP-----QVDTSKILFICGGAFAGLDKVISHRVETGASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLN-ELSEEALIQILKEPKN-----------------ALTKQYQALFNLEGVDLEFRDEALDAIAKKA-------MAR----KTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIYGK
[Model]
338-523
3hwsE
13%
>target
----------ASIAPEIYGHEDVKKALLLLLVGGVDQS--PQ--GMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY-GRY------NPRRSLEQ-----------NVQLPAALLSRFDLLWLIQD--------------------------------------------------------------------------------------------------
>3hwsE
SALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISREGVQQALLKLIEGTVAAFL--QVD--TSKILFICGGAFAGLDKVISHRVETGSASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIYG
[Model]
340-619
3hwsA
13%
>target
-----------IAPEIYGHEDVKKALLLLLVGGVDQ----SPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYT-TGRGSSGVGLTAAVLRDSVSGE----LTLEGGALVLADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPA---------YGRYNPRRSLE---Q--------NVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR--LSTALARL--------------------------
>3hwsA
ALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVG---EDVE-NIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSDNPRDVSGEGVQQALLKLIEGTFLQVDT--------SKILFICGGAFAGLDKVISHRVETGSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLN-ELSEEAL----IQILKEPK-------------NALTKQYQALFNLEGVDLEFRDEALDAIAKKAM-------A----RKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY
[Model]
338-583
3hwsC
14%
>target
---------ASIAPEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG--VGLTAAVLRDSVSGE----LTLEGGALVLADQGVCCIDEFDKMAEA-----------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY-G-----RYNPR-----RSLE--QNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMC--HERQPTVPESLADYITA-----------------------------------------------------
>3hwsC
ALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGD--TGKSNILLIGPTGSGKTLLAETLARLLDVP-FTMADATTLTEAGY---VGEDV-ENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRNPSITRDVSGEGVQQALLKLIEGTVLQVDTS--------KILFICGGAFAGLDKVISHRVSEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLN-ELSEEALIQ----ILKEPK-------------NALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY
[Model]
2c96: STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
373-630
2c96A
14%
>target
--------------------GNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMC-HE----RQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDV-------
>2c96A
LLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQ------GPFISLNCAALNENLLDSELFHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELER--VGGSQPLQVNVRLVCATNAD------LPAMVNEGTFRADLLDRLAFDVVQL-PPLRERESDI----------------------MLMAEYFAIQMCREIKLPLFPGFTERARETLLNYR-------------WPGNIRELKNVVERSVY---RHGTSDYPLDDIIIDPFKR
[Model]
1hqc: STRUCTURE OF RUVB FROM THERMUS THERMOPHILUS HB8 Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-640
1hqcB
14%
>target
--------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGRGSSGVGLTAAVLRDSVSGELTLEGGAL--VLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAK----AGILTTL-NARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS-----------------------------------------------------------------------------
>1hqcB
ALRPKTLDEYIGQERLKQKLRVYLEAAKARK------EPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP------------GD---LAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPG-------------LITAPLLSRFGIVEHLE-YYTPEELAQGVMR----------------------------DARLLGVRITEEAALEIGRR-------S-------RGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDELGLEKRDREILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPRGRVPTELAYRHLGYPPPV
[Model]
343-640
1hqcA
14%
>target
--------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQ-YTTGRGSSGVGLTAAVLRDSVSGELTLEGGAL--VLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAK----AGILTTL-NARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS-----------------------------------------------------------------------------
>1hqcA
ALRPKTLDEYIGQERLKQKLRVYLEAAKARK------EPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP------------GD---LAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPG-------------LITAPLLSRFGIVEHLE-YYTPEELAQGVMR----------------------------DARLLGVRITEEAALEIGRR-------S-------RGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDELGLEKRDREILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPRGRVPTELAYRHLGYPPPV
[Model]
3pfi: 2.7 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF A PROBABLE HOJUNCTION DNA HELICASE (RUVB) FROM CAMPYLOBACTER JEJUNI SUNCTC 11168 IN COMPLEX WITH ADENOSINE-5'-DIPHOSPHATE Solved by: X-RAY, Resolution: 2.69A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-638
3pfiA
15%
>target
-------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLME-----------------------------------------------------------------------------
>3pfiA
LRPSNFDGYIGQESIKKNLNVFIAAAKKRNE------CLDHILFSGPAGLGKTTLANIISYEMSANIKTTA---------APMIEKS--GD--LAAILTNLSEGDILFIDEIHRLSPAIEEVLYPAMEDYRLAQ----TIKIDLPKFTLIGATTRAG-------------MLSNPLRDRFGMQFRLE-FYKDSELALILQKA----------------------------ALKLNKTCEEKAALEIAKRS--------------RSTPRIALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKPIGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASAKSYSALKLNYE
[Model]
343-639
3pfiB
14%
>target
----EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEM-----------------------------------------------------------------------
>3pfiB
SNFDGYIGQESIKKNLNVFIAAAKKR---NE---CLDHILFSGPAGLGKTTLANIISYEMSANIKTTAA---------PMIEKS--GDL--AAILTNLSEGDILFIDEIHRLSPAIEEVLYPAMEDYP--------------KFTLIGATTR-------------AGMLSNPLRDRFGMQFRL-EFYKDSELALILQKAA----------------------------LKLNKTCEEKAALEIAKR-------S-------RSTPRIALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKPIGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASAKSYSAL
[Model]
1in5: THERMOGOTA MARITIMA RUVB A156S MUTANT Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
343-639
1in5A
14%
>target
---------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGS-SGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEM-----------------------------------------------------------------------------
>1in5A
QFLRPKSLDEFIGQENVKKKLSLALEAAKMR---G---EVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAAIL--------------TSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMD-------IQPFTLVGSTTRSG-------------LLSSPLRSRFGIILE-LDFYTVKELKEIIKRAASL----------------------------MDVEIEDAAAEMIAKR-------S-------RGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
2bjw: PSPF AAA DOMAIN Solved by: X-RAY, Resolution: 1.75A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
373-630
2bjwA
14%
>target
-------------------GNIHICLMGDPGVAKSQLLSYIDRLAPRSQ--YTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMC-HE----RQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDV--------
>2bjwA
LGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCA---ALNENLLDSELFGHEKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELE--RVGGSQPLQVNVRLVCATNAD------LPAMVNEGTFRADLLDRLAFDVVQL-PPLRERESDI----------------------MLMAEYFAIQMCREIKLPLFPGFTERARETLLNY-------------RWPGNIRELKNVVERSVY---RHGTSDYPLDDIIIDPFKRR
[Model]
3dzd: CRYSTAL STRUCTURE OF SIGMA54 ACTIVATOR NTRC4 IN THE INACTIVE STATE Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
373-617
3dzdB
14%
>target
------------------------------------------------------------------------------------------------------------------------------------------------------GNIHICLMGDPGVAKSQLLSYIDRLAPRS-QYTTGRGSSGVGLTAAV--------LRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDN--D-LRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHER---QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALA-------
>3dzdB
KRVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELFFPVIVLDVWMPDGDGVNFIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEEYSKKAPPQEEIEFVGEHPKILEIKRLIPKIAKSKAPVLITGESGTGKEIVARLIHRYSGRKGAFVDLN---CASIPQELAESELFGHEKGAFTGALTRKKGKLELADQGTLFLDEVGELDQRVQAKLLRVLETGSFTR--LGGNQKIEVDIRVISATNKNL------EEEIKKGNFREDLYYRLSVFQIYL-PPLRERGKDVILLAEYFLKK------------------------FAKEYKKNCFELSEETKEYLMKQE-------------WKGNVRELKNLIERAVILCEGEVIKP
[Model]
373-617
3dzdA
14%
>target
------------------------------------------------------------------------------------------------------------------------------------------------------GNIHICLMGDPGVAKSQLLSYIDRLAPRS-QYTTGRGSSGVGLTAAV--------LRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDN--D-LRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHER---QPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILRLSTALA-------
>3dzdA
KRVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELFFPVIVLDVWMPDGDGVNFIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEEYSKKAPPQEEIEFVGEHPKILEIKRLIPKIAKSKAPVLITGESGTGKEIVARLIHRYSGRKGAFVDLN---CASIPQELAESELFGHEKGAFTGALTRKKGKLELADQGTLFLDEVGELDQRVQAKLLRVLETGSFTR--LGGNQKIEVDIRVISATNKNL------EEEIKKGNFREDLYYRLSVFQIYL-PPLRERGKDVILLAEYFLKK------------------------FAKEYKKNCFELSEETKEYLMKQE-------------WKGNVRELKNLIERAVILCEGEVIKP
[Model]
3pxg: STRUCTURE OF MECA121 AND CLPC1-485 COMPLEX Solved by: X-RAY, Resolution: 3.65A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
372-588
3pxgC
13%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGG---------ALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQP--TVPESLADYITAAYVEM----------------------------------------------------------------------------------
>3pxgC
MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIN-----NE--VPEILRDK-------RVMTLDMGEDRLKKVMDEIRQAGNIILFIDAI----------LKPSLARGE---------------LQCIGATTLDE--YR------KYIEKDAALERRFQPIQ--VDQPSVDESIQILQGLRDRYEAH-----HRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWT
[Model]
343-588
3pxgF
12%
>target
------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGS-SGVGLTAAVLRDSVSGELTLEG------GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQP--TVPESLADYITAAYVEM----------------------------------------------------------------------------------
>3pxgF
FGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS-----------RRTKNNPVLIGEPGVGKTAIAEGLAQQII-----NNEVPEILRDKRV----------MTLEDRLKKVMDEIRQAGNIILFIDAL-----------KPSLAR---------------GELQCIGATTLDE--Y------RKYIEKDAALERRFQPIQ--VDQPSVDESIQILQGLRDRYEA-----HHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWT
[Model]
372-589
3pxgE
14%
>target
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEG------GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQP--TVPESLADYITAAYVEMR---------------------------------------------------------------------------------
>3pxgE
FGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQII-----NNE--VPEILR-----D--KRVMTLEDRLKKVMDEIRQAGNIILFIDA--------K----PSL-------AR--------GELQCIGATTLDE--Y------RKYIEKDAALERRFQPIQ--VDQPSVDESIQILQGLRDRYEAH-----HRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWT
[Model]
372-589
3pxgD
14%
>target
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEG------GALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQP--TVPESLADYITAAYVEMR---------------------------------------------------------------------------------
>3pxgD
FGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQII-----NNE--VPEILR-----D--KRVMTLEDRLKKVMDEIRQAGNIILFIDA--------K----PSL-------AR--------GELQCIGATTLDE--Y------RKYIEKDAALERRFQPIQ--VDQPSVDESIQILQGLRDRYEAH-----HRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWT
[Model]
1kyi: HSLUV (H. INFLUENZAE)-NLVS VINYL SULFONE INHIBITOR COMPLEX Solved by: X-RAY, Resolution: 3.41A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
342-635
1kyiC
12%
>target
-------------PEIYGHEDVKKALLLLLVG---GVDQSPQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS-------GVGLTAAVLRD---S---VSGELTLEGG------ALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY---GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR-L----STALARLRMVD-IVEKEDVNEAIR-------------
>1kyiC
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL-QEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEATKFTEVDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKH---GMVKTDHILFIASGAFQ----VARPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH-----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTE------NIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
342-635
1kyiF
12%
>target
-------------PEIYGHEDVKKALLLLLVG---GVDQSPQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS-------GVGLTAAVLRD---S---VSGELTLEGG------ALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY---GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR-L----STALARLRMVD-IVEKEDVNEAIR-------------
>1kyiF
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL-QEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEATKFTEVDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKH---GMVKTDHILFIASGAFQ----VARPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH-----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTE------NIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
342-635
1kyiB
12%
>target
-------------PEIYGHEDVKKALLLLLVG---GVDQSPQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS-------GVGLTAAVLRD---S---VSGELTLEGG------ALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY---GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR-L----STALARLRMVD-IVEKEDVNEAIR-------------
>1kyiB
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL-QEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEATKFTEVDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKH---GMVKTDHILFIASGAFQ----VARPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH-----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTE------NIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
342-635
1kyiE
12%
>target
-------------PEIYGHEDVKKALLLLLVG---GVDQSPQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS-------GVGLTAAVLRD---S---VSGELTLEGG------ALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY---GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR-L----STALARLRMVD-IVEKEDVNEAIR-------------
>1kyiE
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL-QEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEATKFTEVDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKH---GMVKTDHILFIASGAFQ----VARPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH-----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTE------NIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
342-635
1kyiA
12%
>target
-------------PEIYGHEDVKKALLLLLVG---GVDQSPQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS-------GVGLTAAVLRD---S---VSGELTLEGG------ALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY---GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR-L----STALARLRMVD-IVEKEDVNEAIR-------------
>1kyiA
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL-QEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEATKFTEVDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKH---GMVKTDHILFIASGAFQ----VARPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH-----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTE------NIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
342-635
1kyiD
12%
>target
-------------PEIYGHEDVKKALLLLLVG---GVDQSPQGM-KIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS-------GVGLTAAVLRD---S---VSGELTLEGG------ALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAY---GRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR-L----STALARLRMVD-IVEKEDVNEAIR-------------
>1kyiD
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL-QEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEATKFTEVDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKH---GMVKTDHILFIASGAFQ----VARPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH-----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTE------NIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
342-635
1kyiU
13%
>target
-------------PEIYGHEDVKKALLLLLV---GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS---GVGLT---AAVLRDSVSGE--------LTLEGGALVLADQGVCCIDEFDKMAEA---------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR-----LSTALARLRMVDI-VEKEDVNEAIR-------------
>1kyiU
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEAEVDSIIRDLTDSAMKLVRQQEIAKNRKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVSTK-HGMVK--TDHILFIASGAFQV---------ARPSDLIPELQGRLPIRVE-LTALSAADFERILTEPH-----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK------TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
342-635
1kyiX
13%
>target
-------------PEIYGHEDVKKALLLLLV---GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS---GVGLT---AAVLRDSVSGE--------LTLEGGALVLADQGVCCIDEFDKMAEA---------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR-----LSTALARLRMVDI-VEKEDVNEAIR-------------
>1kyiX
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEAEVDSIIRDLTDSAMKLVRQQEIAKNRKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVSTK-HGMVK--TDHILFIASGAFQV---------ARPSDLIPELQGRLPIRVE-LTALSAADFERILTEPH-----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK------TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
342-635
1kyiT
13%
>target
-------------PEIYGHEDVKKALLLLLV---GGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSS---GVGLT---AAVLRDSVSGE--------LTLEGGALVLADQGVCCIDEFDKMAEA---------DRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCH--ERQPTVPESLADYITAAYVEMRREARASKDATYTSARTLLAILR-----LSTALARLRMVDI-VEKEDVNEAIR-------------
>1kyiT
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEAEVDSIIRDLTDSAMKLVRQQEIAKNRKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVSTK-HGMVK--TDHILFIASGAFQV---------ARPSDLIPELQGRLPIRVE-LTALSAADFERILTEPH-----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK------TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
<