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SWISS-MODEL Repository - Model Details

Model Overview

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2194

Sequence

UniProt

Q6BER5

Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING

Q6BER5: 6239.F26H11.2c

Domain

Link to: [ InterPro ]

	Bromodomain
	PHD
	PHD
	DDT

Model 3D Structure

	Model information:
	Modelled residue range:	1960 to 2007
	Based on template:	[ 3kv4 ]
	Sequence Identity [%]:	52%
	Model date:	2013-02-12
	Revision date:	2013-01-30

Quaternary structure information:	[details]
Template (3kv4): HETERO DIMER Model built :SINGLE CHAIN

Ligand information:	[details]
Ligands in the template: ALA: 1, EDO: 9, FE2: 1, OGA: 1, ZN: 2. Ligands in the model: ZN: 2

Template Links: [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2013-01-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]

Alignment


TARGET    1          LYCVC QKPYDDTKFY VGCDSCQGWF HPECVGTTRA EAEQAADY--
3kv4A     3     svp--vyclc rlpydvtrfm iecdmcqdwf hgscvgv--- eeekaadidl
                                                                      
TARGET                             ss sss    sss ss    hhhh hhhhh     
3kv4A                              ss sss    sss ss          hhhhhsss 


TARGET    44    -NCPAC --- ---------- ---------- ---------- ----------
3kv4A     48    yhcpncevlh gpsimkkkpv ktgsptfvre lrsrtfdssd evilkptgnq
                                                                      
TARGET                                                                
3kv4A              hhhhhh     sss         hhhhhh hhh                  


TARGET          ---------- ---------- ---------- ---------- ----------
3kv4A     111   ltvefleens fsvpilvlkk dglgmtlpsp sftvrdvehy vgsdkeidvi
                                                                      
TARGET                                                                
3kv4A             hhhhh        sss                  hhhhhhh h   ssssss


TARGET          ---------- ---------- ---------- ---------- ----------
3kv4A     161   dvtrqadckm klgdfvkyyy sgkrekvlnv islefsdtrl snlvetpkiv
                                                                      
TARGET                                                                
3kv4A           ss  ssssss sshhhhhhhh       sss    sss    h hh     hhh


TARGET          ---------- ---------- ---------- ---------- ----------
3kv4A     211   rklswvenlw peecvferpn vqkyclmsvr dsytdfhidf ggtsvwyhvl
                                                                      
TARGET                                                                
3kv4A           hh   hhh                ssssss    sss          sssssss


TARGET          ---------- ---------- ---------- ---------- ----------
3kv4A     261   kgekifylir ptnanltlfe cwssssnqne mffgdqvdkc ykcsvkqgqt
                                                                      
TARGET                                                                
3kv4A            ssssssss    hhhhhhhh hhh   hhh     hh      sssssss ss


TARGET          ---------- ---------- ---------- ---------- ----------
3kv4A     311   lfiptgwiha vltpvdclaf ggnflhslni emqlkayeie krlstadlfr
                                                                      
TARGET                                                                
3kv4A           sss    sss sss   ssss ssss     h hhhhhhhhhh hhh       


TARGET          ---------- ---------- ---------- ---------- ----------
3kv4A     361   fpnfeticwy vgkhildifr glrenrrhpa sylvhggkal nlafrawtrk
                                                                      
TARGET                                                                
3kv4A              hhhhhhh hhhhhhhhhh hhhh        hhhhhhhhh hhhhhh   h


TARGET          ---------- ---------- ---------- -------              
3kv4A     411   ealpdhedei petvrtvqli kdlareirlv edifqqn              
                                                                      
TARGET                                                                
3kv4A           hhhh            hhhhh hhhhhhhhhh hhhhh

Quality

[ start new quality assessment in Workspace ]

Ligand Modelling Log

Template's ligands section 
Ligands in the template: ALA: 1, EDO: 9, FE2: 1, OGA: 1, ZN: 2. 
Ligands in the template that will be assessed: FE2450, ZN448, ZN449. 
Model's ligands section 
ZN448 
All the residues interacting with the ligand are completely conserved between model and template. 
The RMSD between the interacting residues of model and template is smaller than 2 Angstrom: 1.470 
Given the properties calculated previously, the ligand A.ZN448 will be included in the final model. 
ZN448: conservation:True, RMSD:True, included: True 
 
ZN449 
All the residues interacting with the ligand are completely conserved between model and template. 
The RMSD between the interacting residues of model and template is smaller than 2 Angstrom: 1.790 
Given the properties calculated previously, the ligand A.ZN449 will be included in the final model. 
ZN449: conservation:True, RMSD:True, included: True 
 
FE2450 
There are not residues in the model that match the ones that interact with the ligand in the template. 
Given the properties calculated previously, the ligand A.FE2450 will not be included in the final model. 
FE2450: conservation:False, RMSD:False, included: False 
 
The new model with the included ligands was saved successfully.

Oligomer Modelling Log

Quaternary Structure Annotation of the Template
3kv4 is annotated as HETERO DIMER
The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry
The following biological unit was used to build the template structure: 3kv4.pdb1.gz

Quaternary Structure Modelling of the Target Protein
3kv4_1

Template Selection

 - Start SMR-Pipeline for:8ada17a8d82dfbd500c476632c5e73ea on BC2-cluster at Tue Feb 12 10:53:41
2013 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

FATAL - No A3m found

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modfied template library 
 - Summarize templates: 
 - No template with A found
 - No template with B found
 - No template with P found
 - No template with Q found
 - No template with B found
 - No template with A found
 - No template with P found
 - No template with P found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with D found
 - No template with C found
 - No template with C found
 - No template with A found
 - No template with A found
 - No template with C found
 - No template with C found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with I found
 - No template with P found
 - No template with L found
 - No template with O found
 - No template with K found
 - No template with N found
 - No template with J found
 - No template with M found
 - No template with B found
 - No template with F found
 - No template with B found
 - No template with F found
 - No template with F found
 - No template with B found
 - No template with F found
 - No template with B found
 - No template with D found
 - No template with B found
 - No template with D found
 - No template with C found
 - No template with C found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with P found
 - No template with Q found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with P found
 - No template with P found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with P found
 - No template with Q found
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with J found
 - No template with N found
 - No template with I found
 - No template with K found
 - No template with P found
 - No template with L found
 - No template with O found
 - No template with M found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with R found
 - No template with Q found
 - No template with P found
 - No template with C found
 - No template with C found
 - No template with C found
 - Warning: Oligomer Prediction was not successfull!

 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:6): model based on new templates
 - Send 6 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                                                                        **
 - building model based on 2fuiA (1960-2007) was not successful go to next best template
 -                                                                        **
 - building model based on 2fuuA (1960-2007) was not successful go to next best template
 -                                                                        **
 - building model based on 3kv4A (1960-2007) was successful 
 -                                                                            ***
 - building model based on 3i3jF (2052-2131) was successful 
 -                                                                        ******
 - building model based on 2fsaC (1960-2131) was successful 
 -                                                                      **
 - building model based on 2ri7A (1901-1947) was successful 
 -              *
 - building model based on 3askB (350-389) was successful 
 -                                                                      ****
 - building model based on 4gndA (1898-2005) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:8ada17a8d82dfbd500c476632c5e73ea on BC2-cluster at Tue Feb 12 10:57:19
2013

Template Search

[ start new template identification in Workspace ]

Template Description

Match

Chain

SeqId

2rs9: SOLUTION STRUCTURE OF THE BROMODOMAIN OF HUMAN BRPF1 IN COHISTONE H4K5AC PEPTIDE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

2034-2139

2rs9B

32%

2d9e: SOLUTION STRUCTURE OF THE BROMODOMAIN OF PEREGRIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

2034-2139

2d9eA

32%

4gy5: CRYSTAL STRUCTURE OF THE TANDEM TUDOR DOAMIN AND PLANT HOMUHRF1 WITH HISTONE H3K9ME3
Solved by: X-RAY, Resolution: 2.96A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1903-1948	4gy5A	24%	>target --------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECI >4gy5A FLYKVNEYVDARDTNMGAWFEAQVVRVTRKEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDK-QLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
1963-2008	4gy5A	24%	>target --------------------------------------------------------------------------------------------------------------------------------------------------------------------------VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACT >4gy5A FLYKVNEYVDARDTNMGAWFEAQVVRVTRKEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
349-390	4gy5A	27%	>target -----------------------------------------------------------------------------------------------------------------------------------------------------------------------NCRVCGKSSGR---VVGCTQCEAAFHVEC--SHLKPFPE-V-LVCNICK >4gy5A FLYKVNEYVDARDTNMGAWFEAQVVRVTRKEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGR-QDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
1903-1947	4gy5B	24%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEEC >4gy5B LYKVNEYVDARDTNMGAWFEAQVVRVTRKEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDK-QLMCDECDMAFHIYC-PLSSV--PSEDEWYCPEC [Model]
1963-2007	4gy5B	24%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC >4gy5B LYKVNEYVDARDTNMGAWFEAQVVRVTRKEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYC-P-LSS-VPSEDEWYCPEC [Model]
349-389	4gy5B	28%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------NCRVCGKSSGR---VVGCTQCEAAFHVECSHLKPFPE--VLVCNIC >4gy5B LYKVNEYVDARDTNMGAWFEAQVVRVTRKEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGR-QDPDKQLMCDECDMAFHIYC-PLSSVPSEDEWYCPEC [Model]

3ask: STRUCTURE OF UHRF1 IN COMPLEX WITH HISTONE TAIL
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1895-1948	3askA	20%	>target -----------------------------------------------------------------------------------------------------------------------------------------------------------------INLSIEHCTCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECI >3askA SLYKVNEYVDARDTNMGAWFEAQVVRVTRKAEEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDKQLMCDECDMAFHIYCPPLSSVPS--EDEWYCPECR [Model]
1962-2008	3askA	23%	>target ------------------------------------------------------------------------------------------------------------------------------------------------------------------------CVCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACT >3askA SLYKVNEYVDARDTNMGAWFEAQVVRVTRKAEEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDKQLMCDECDMAFHIYCPPL-SSV-PSEDEWYCPECR [Model]
350-390	3askA	30%	>target --------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRVCGKSSGRVVGCTQCEAAFHVECSHLKPFPE-V-LVCNICK >3askA SLYKVNEYVDARDTNMGAWFEAQVVRVTRKAEEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDKQLMCDECDMAFHIYCPPLSSVPSEDEWYCPECR [Model]
1903-1947	3askB	24%	>target --------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEEC >3askB SLYKVNEYVDARDTNMGAWFEAQVVRVTRKEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDK-QLMCDECDMAFHIYC-PLSS--VPSEDEWYCPEC [Model]
1963-2007	3askB	24%	>target --------------------------------------------------------------------------------------------------------------------------------------------------------------------------VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC >3askB SLYKVNEYVDARDTNMGAWFEAQVVRVTRKEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCP--LSS-VPSEDEWYCPEC [Model]
350-389	3askB	31%	>target ------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRVCGKSSGR---VVGCTQCEAAFHVECSHLKPFP-E-VLVCNIC >3askB SLYKVNEYVDARDTNMGAWFEAQVVRVTRKEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGG-RQDPDKQLMCDECDMAFHIYC-PLSSVPSEDEWYCPEC [Model]

3zvz: PHD FINGER OF HUMAN UHRF1
Solved by: X-RAY, Resolution: 1.44A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1903-1948	3zvzB	22%	>target ---------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECI- >3zvzB GHMRVCACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN [Model]
1963-2008	3zvzB	24%	>target ---------VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACT- >3zvzB GHMRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN [Model]
349-390	3zvzB	29%	>target ------NCRVCGK--SSGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICK- >3zvzB GHMRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN [Model]

3sow: STRUCTURE OF UHRF1 PHD FINGER IN COMPLEX WITH HISTONE H3K4PEPTIDE
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1901-1950	3sowA	22%	>target ------------------HCTCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIEE >3sowA PSCKHCKDDVNRLCRVCACHLCGGRQDPDK-QLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
1962-2009	3sowA	23%	>target -------------------CVCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTR- >3sowA PSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
349-391	3sowA	29%	>target -----------------NCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICKK- >3sowA PSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
1902-1947	3sowB	22%	>target -------------------CTCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEEC- >3sowB PSCKHCKDDVNRLCRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
1963-2008	3sowB	24%	>target --------------------VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACT >3sowB PSCKHCKDDVNRLCRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
347-390	3sowB	28%	>target ---------------DENCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICK >3sowB PSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]

4gnf: CRYSTAL STRUCTURE OF NSD3 TANDEM PHD5-C5HCH DOMAINS COMPLEPEPTIDE 1-15
Solved by: X-RAY, Resolution: 1.55A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1899-2007	4gnfA	13%	>target ---IEHC-TCQKIFDASKLYIQCEL--CARWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKDQPALYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC----- >4gnfA QMHEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQP---PYGKWECPWHQ-------------CDECSSAA-----VSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
1958-2008	4gnfA	22%	>target --PALYC-VCQKPYDDTKFYVGCDS--CQGWFHPECVGTTRAEAEQAADYNCPACT----------------------------------------------- >4gnfA QMHEDYCFQCGDG----GELVMCDKKDCPKAYHLLCLNLTQPP---YGKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
345-392	4gnfA	25%	>target -QNDENCRVCGKSSGRVVGCT--QCEAAFHVECSHLKPFPE-VLVCNICKKN--------------------------------------------- >4gnfA QMHEDYCFQCGD-GGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]

3t6r: STRUCTURE OF UHRF1 IN COMPLEX WITH UNMODIFIED H3 N-TERMINA
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1902-1948	3t6rA	23%	>target ------------------------CTCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECI >3t6rA APEFGPSCKHCKDDVNRLCRVCACHLCGGRQDPDK-QLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
1963-2008	3t6rA	24%	>target -------------------------VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACT >3t6rA APEFGPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
348-390	3t6rA	29%	>target ---------------------ENCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICK >3t6rA APEFGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
1903-1947	3t6rB	22%	>target -----------------------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEEC- >3t6rB EFGPSCKHCKDDVNRLCRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
1960-2008	3t6rB	24%	>target -------------------LYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACT >3t6rB EFGPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
347-390	3t6rB	28%	>target ------------------DENCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICK >3t6rB EFGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]

3sox: STRUCTURE OF UHRF1 PHD FINGER IN THE FREE FORM
Solved by: X-RAY, Resolution: 2.65A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1903-1947	3soxA	22%	>target ---------------------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEEC >3soxA GPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC [Model]
1963-2007	3soxA	24%	>target ---------------------VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC >3soxA GPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC [Model]
350-389	3soxA	30%	>target -------------------CRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNIC >3soxA GPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC [Model]
1903-1947	3soxB	22%	>target ---------------------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEEC >3soxB GPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC [Model]
1963-2007	3soxB	24%	>target ---------------------VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC >3soxB GPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC [Model]
350-389	3soxB	30%	>target -------------------CRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNIC >3soxB GPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC [Model]

4gng: CRYSTAL STRUCTURE OF NSD3 TANDEM PHD5-C5HCH DOMAINS COMPLEH3K9ME3 PEPTIDE
Solved by: X-RAY, Resolution: 1.73A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1900-2005	4gngA	14%	>target ---EHC-TCQKIFDASKLYIQCE--LCARWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKDQPALYC-VCQKPYDDTKFYVGCDSCQGWFHPECVG-TTRAEAEQAADYNCP------- >4gngA MHEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQ---PPYGKWECPWHQ-------------CDECSSA---AVS--FCEFCPHSFCKDHEKGALV-PSALEGRLCCSEHDPMAP [Model]
1960-2008	4gngA	23%	>target ---LYC-VCQKPYDDTKFYVGCDS--CQGWFHPECVGTTRAEAEQAADYNCPACT----------------------------------------------- >4gngA MHEDYCFQCGDG----GELVMCDKKDCPKAYHLLCLNLTQPP---YGKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
346-391	4gngA	27%	>target -NDENCRVCGKSSGRVVGCT--QCEAAFHVECSHLKPFPE-VLVCNICKK---------------------------------------------- >4gngA MHEDYCFQCGD-GGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
1899-2009	4gngD	13%	>target ----IEHC-TCQKIFDASKLYIQCEL--CARWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKDQPALYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTR--- >4gngD KQMHEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQP---PYGKWECPWHQ-------------CDECSSAAVS-----FCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
1957-2008	4gngD	22%	>target --QPALYC-VCQKPYDDTKFYVGCDS--CQGWFHPECVGTTRAEAEQAADYNCPACT----------------------------------------------- >4gngD KQMHEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQPPY---GKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
344-392	4gngD	25%	>target -FQNDENCRVCGKSSGRVVGCT--QCEAAFHVECSHLKPFPE-VLVCNICKKN--------------------------------------------- >4gngD KQMHEDYCFQCGD-GGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
349-389	4gngD	22%	>target -------------------------------------------------NCRVCGKSSGRVVGCTQCEAAFHVEC--SHLKP-FPEV-LVCNIC----- >4gngD KQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSS-AAV-SFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]

3shb: CRYSTAL STRUCTURE OF PHD DOMAIN OF UHRF1
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1902-1947	3shbA	22%	>target ---------------------CTCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEEC- >3shbA SGPSCKHCKDDVNRLCRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
1963-2008	3shbA	24%	>target ----------------------VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACT >3shbA SGPSCKHCKDDVNRLCRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
347-390	3shbA	28%	>target -----------------DENCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICK >3shbA SGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]

3sou: STRUCTURE OF UHRF1 PHD FINGER IN COMPLEX WITH HISTONE H3 1
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1902-1949	3souA	21%	>target -------------------CTCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIE-- >3souA PSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDA [Model]
1960-2010	3souA	23%	>target ----------------LYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTRE- >3souA PSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDA [Model]
350-390	3souA	30%	>target ------------------CRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICK--- >3souA PSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDA [Model]
1902-1950	3souB	22%	>target --------------------CTCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIEE- >3souB GPSCKHCKDDVNRLCRVCACHLCGGRQDPDK-QLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDA [Model]
1960-2010	3souB	23%	>target -----------------LYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTRE- >3souB GPSCKHCKDDVNRLCRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDA [Model]
348-391	3souB	28%	>target -----------------ENCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICKK-- >3souB GPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDA [Model]

2lri: NMR STRUCTURE OF THE SECOND PHD FINGER OF AIRE (AIRE-PHD2)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1899-1949	2lriC	21%	>target -----------IEHC-TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIE-------- >2lriC GAMEGQQNLAPGARCGVCG---D-GTDVLRCTHCAAAFHWRCHF-PAGTSRPGTGLRCRSCSGDVTPAPVE [Model]
1959-2010	2lriC	21%	>target -----------ALYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTRE------- >2lriC GAMEGQQNLAPGARCGVCG---DG-TDVLRCTHCAAAFHWRCHFPAGTSRPG-TGLRCRSCSGDVTPAPVE [Model]
343-396	2lriC	30%	>target -------KFQNDENCRVCGKSSGRVVGCTQCEAAFHVEC--SHLKPFPE-VLVCNICKKNSAVR---- >2lriC GAMEGQQNLAPGARCGVCGD-GTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV-TPAPVE [Model]

2lgg: STRUCTURE OF PHD DOMAIN OF UHRF1 IN COMPLEX WITH H3 PEPTID
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1903-1949	2lggA	21%	>target ----------------------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIE- >2lggA SGPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
1940-2009	2lggA	21%	>target EHWSCEECIEEQERVKDQPALYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTR- >2lggA SGPSCKHCKDD--VNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
348-391	2lggA	28%	>target ------------------ENCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICKK- >2lggA SGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]

2lgl: NMR STRUCTURE OF THE UHRF1 PHD DOMAIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1903-1949	2lglA	21%	>target ----------------------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIE- >2lglA SGPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
1940-2009	2lglA	21%	>target EHWSCEECIEEQERVKDQPALYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTR- >2lglA SGPSCKHCKDD--VNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
348-391	2lglA	28%	>target ------------------ENCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICKK- >2lglA SGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]

3asl: STRUCTURE OF UHRF1 IN COMPLEX WITH HISTONE TAIL
Solved by: X-RAY, Resolution: 1.41A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1903-1949	3aslA	21%	>target ---------------------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIE- >3aslA GPSCKHCKDDVNRLCRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
1961-2009	3aslA	24%	>target ------------------YC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTR- >3aslA GPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
346-391	3aslA	27%	>target ---------------NDENCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICKK- >3aslA GPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]

2lgk: NMR STRUCTURE OF UHRF1 PHD DOMAINS IN A COMPLEX WITH HISTOPEPTIDE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1903-1949	2lgkA	21%	>target ----------------------TCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIE- >2lgkA SGPSCKHCKDDVNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
1940-2009	2lgkA	21%	>target EHWSCEECIEEQERVKDQPALYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTR- >2lgkA SGPSCKHCKDD--VNRLCRVCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]
348-391	2lgkA	28%	>target ------------------ENCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICKK- >2lgkA SGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND [Model]

3zvy: PHD FINGER OF HUMAN UHRF1 IN COMPLEX WITH UNMODIFIED HISTON-TERMINAL TAIL
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1902-1947	3zvyA	22%	>target -------------------CTCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEEC- >3zvyA PSCKHCKDDVNRLCRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
1902-1948	3zvyB	19%	>target -------------------CTCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECI- >3zvyB PSCKHCKDDVNRLCRVCACHLCGGRQ-DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN [Model]
1963-2008	3zvyA	24%	>target --------------------VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACT >3zvyA PSCKHCKDDVNRLCRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
1962-2008	3zvyB	23%	>target -------------------CVCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACT- >3zvyB PSCKHCKDDVNRLCRVCACHLCGGRQDP-DKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN [Model]
347-390	3zvyA	28%	>target ---------------DENCRVCGKS--SGRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICK >3zvyA PSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR [Model]
358-390	3zvyB	30%	>target ----------------------------GRVVGCTQCEAAFHVEC--SHLKPFP-E-VLVCNICK- >3zvyB PSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN [Model]

4gnd: CRYSTAL STRUCTURE OF NSD3 TANDEM PHD5-C5HCH DOMAINS
Solved by: X-RAY, Resolution: 2.27A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1956-2008	4gndA	21%	>target --DQPALYC-VCQKPYDDTKFYVGCDS--CQGWFHPECVGTTRAEAEQAADYNCPACT----------------------------------------------- >4gndA PKQMHEDYCFQCGDG----GELVMCDKKDCPKAYHLLCLNLTQPPY---GKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
343-390	4gndA	27%	>target -KFQNDENCRVCGKSSGRVVGCTQ--CEAAFHVECSHLKPFPE-VLVCNICK----------------------------------------------- >4gndA PKQMHEDYCFQCGD-GGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
349-393	4gndA	17%	>target --------------------------------------------------NCRVCGKSSGRVVGCTQCEAAFHVECSHLKPFPE-VLVCNICKKNS---- >4gndA PKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSS--AAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
1896-2007	4gndC	13%	>target -----------NLSIEHC-TCQKIFDASKLYIQCEL--CARWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKDQPALYC-VCQKPYDDTKFYVGCDSCQGWFHPECVG-TTRAEAEQAADYNCPAC----- >4gndC SNARKIKTEPKQMHEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQP---PYGKWECPWH-------------QCDECSSA---AVS--FCEFCPHSFCKDHEKGALVPS-ALEGRLCCSEHDPMAP [Model]
1951-2008	4gndC	21%	>target ------QERVKDQPALYC-VCQKPYDDTKFYVGCDS--CQGWFHPECVGTTRAEAEQAADYNCPACT----------------------------------------------- >4gndC SNARKIKTEPKQMHEDYCFQCGD---GG-ELVMCDKKDCPKAYHLLCLNLTQPPY---GKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
340-391	4gndC	25%	>target -------NVGKFQNDENCRVCGKSSGRVVGCT--QCEAAFHVECSHLKPFPE-VLVCNICKK---------------------------------------------- >4gndC SNARKIKTEPKQMHEDYCFQCGD-GGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
1898-2005	4gndA	13%	>target ----SIEHC-TCQKIFDASKLYIQCEL--CARWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKDQPALYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCP------- >4gndA PKQMHEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQP---PYGKWECPWHQ-------------CDECSSA---AV--SFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]

4gne: CRYSTAL STRUCTURE OF NSD3 TANDEM PHD5-C5HCH DOMAINS COMPLEPEPTIDE 1-7
Solved by: X-RAY, Resolution: 2.27A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1898-2005	4gneA	13%	>target ----SIEHC-TCQKIFDASKLYIQCEL--CARWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKDQPALYC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCP------- >4gneA PKQMHEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQP---PYGKWECPWHQ-------------CDECSSA---AV--SFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
1956-2008	4gneA	21%	>target --DQPALYC-VCQKPYDDTKFYVGCDS--CQGWFHPECVGTTRAEAEQAADYNCPACT----------------------------------------------- >4gneA PKQMHEDYCFQCGDG----GELVMCDKKDCPKAYHLLCLNLTQPPY---GKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
343-390	4gneA	27%	>target -KFQNDENCRVCGKSSGRVVGCTQ--CEAAFHVECSHLKPFPE-VLVCNICK----------------------------------------------- >4gneA PKQMHEDYCFQCGD-GGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]
349-393	4gneA	17%	>target --------------------------------------------------NCRVCGKSSGRVVGCTQCEAAFHVECSHLKPFPE-VLVCNICKKNS---- >4gneA PKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSS--AAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP [Model]

Downloads

download model.tgz

Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.