SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures
1
982

Sequence
UniProt Q6DFR2
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
UBA
Cbl_N
Cbl_N2
Cbl_N3
zf-C3HC4_3

Model 3D Structure
Model information:
Modelled residue range: 930 to 972
Based on template: [ 2oob ]  
Sequence Identity [%]: 93%
Model date: 2008-08-29
Revision date: 2008-08-29

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-29. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment

TARGET    930      ENVDAKI AKLMGEGFPF EEVKRALEIA QNNVDVARSI LREFAF    
2oobA     929   l--envdaki aklmgegyaf eevkraleia qnnvevarsi lrefaf-   
                                                                      
TARGET               hhhhh hhhhh    h hhhhhhhhhh    hhhhhhh hhh       
2oobA                hhhhh hhhhh    h hhhhhhhhhh    hhhhhhh hhhh      



Quality


no data available!


no data available!


Template Selection
START PIPELINE ON ID: dc0b505f344a811e80d8b3d6ee018b17 on BC2-cluster at Fri Aug 29 22:22:21 2008 
BLAST_TEMPLATE SELECTION SUCCESSFUL TEMPLATES FOUND:  2 BUT STILL ROOM FOR IMPROVEMENT GO TO
HHSEARCH


############# TEMPLATES SELECTED #############

>dc0b505f344a811e80d8b3d6ee018b17
**********************************************************************************
>1fbvA Evalue:0 SeqID:85.969 Method:BLAST Type:MODEL
----********************************----------------------------------------------
>2oobA Evalue:2.86386e-16 SeqID:93.023 Method:BLAST Type:MODEL
-----------------------------------------------------------------------------****-


TEMPLATE ID    START          STOP           METHOD         STATUS         
1fbvA          46             437            BLAST          BUILT          
2oobA          930            972            BLAST          BUILT          

FINISHED PIPELINE ON ID: dc0b505f344a811e80d8b3d6ee018b17 on gopt-27.cluster.bc2.ch BC2-Cluster at
Fri Aug 29 22:33:09 2008 


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.