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SWISS-MODEL Repository - Model Details

Model Overview

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487

Sequence

UniProt

Q6DFX2

Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING

Q6DFX2: 10090.ENSMUSP000

Domain

Link to: [ InterPro ]

	VWA
	Ant_C
	Anth_Ig

Model 3D Structure

	Model information:
	Modelled residue range:	41 to 217
	Based on template:	[ 1sht ]
	Sequence Identity [%]:	93%
	Model date:	2013-02-22
	Revision date:	2013-01-30

Quaternary structure information:	[details]
Template (1sht): MONOMER Model built: SINGLE CHAIN

Ligand information:	[details]
Ligands in the template: ACT: 1, MG: 1. Ligands in the model: MG: 1

Template Links: [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2013-01-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]

Alignment


TARGET    1       KAFDLYFV LDKSGSVANN WIEIYNFVHQ LTERFVSPEM RLSFIVFSSQ
1shtX     41      rafdlyfv ldksgsvann wieiynfvqq laerfvspem rlsfivfssq
                                                                      
TARGET              ssssss sss         hhhhhhhhh hhhh       ssssssss s
1shtX               ssssss sss         hhhhhhhhh hhhh       ssssssss s


TARGET    49    ATIILPLTGD RYKIGKGLED LKAVKPVGET YIHEGLKLAN EQIQNAGGLK
1shtX     89    atiilpltgd rgkiskgled lkrvspvget yiheglklan eqiqkagglk
                                                                      
TARGET          ssss       hhhhhhhhhh hh           hhhhhhhh hhhhhh    
1shtX           ssss       hhhhhhhhhh hh           hhhhhhhh hhhhhh    


TARGET    99    ASSIIIALTD GKLDGLVPSY AENEAKKSRS LGASVYCVGV LDFEQAQLER
1shtX     139   tssiiialtd gkldglvpsy aekeakisrs lgasvycvgv ldfeqaqler
                                                                      
TARGET           ssssssss        hhhh hhhhhhhhhh    sssssss     hhhhhh
1shtX            ssssssss        hhhh hhhhhhhhhh    sssssss     hhhhhh


TARGET    149   IADSKDQVFP VKGGFQALKG IINSILAQS                       
1shtX     189   iadskeqvfp vkggfqalkg iinsilaqs-                      
                                                                      
TARGET          h     ssss s     hhhh hhhhhh                          
1shtX           h     ssss s     hhhh hhhhhh

Quality

[ start new quality assessment in Workspace ]

Ligand Modelling Log

Template's ligands section 
Ligands in the template: ACT: 1, MG: 1. 
Ligands in the template that will be assessed: MG203. 
Model's ligands section 
MG203 
All the residues interacting with the ligand are completely conserved between model and template. 
The RMSD between the interacting residues of model and template is smaller than 2 Angstrom: 0.070 
Given the properties calculated previously, the ligand MG203 will be included in the final model. 
MG203: conservation:True, RMSD:True, included: True 
 
The new model with the included ligands was saved successfully.

Oligomer Modelling Log

Quaternary Structure Annotation of the Template 
 1sht is annotated as MONOMER 
 The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry 
 The following biological unit was used to build the template structure: 1sht.pdb1.gz 
      
 
Quaternary Structure Modelling of the Target Protein 
 Analysis of evolutionary and family specific aspects revealed non-conservation of the oligomeric structure 
 Hence, the oligomeric structures of the target and the template cannot be assumed to be similar (=MONOMER) 
 The target structure was calculated as SINGLE CHAIN 
 The corresponding reliability score is 0.472 (>0.5 indicates similarity)

Template Selection

 - Start SMR-Pipeline for:97d2e64db4226b441cfc3423f36121a1 on BC2-cluster at Fri Feb 22 12:36:04
2013 


 - Analyze BLAST summary ... 
 - Blast template search was successfull, number of templates selected for modeling:  1
 - But still uncovered regions of the target sequence detected, go for: HHSEARCH

 - Run HHSearch to detect more templates...
FATAL - No md5 found in hash for: 4f1jB
FATAL - No md5 found in hash for: 4f1jA
FATAL - No md5 found in hash for: 4f1kB
FATAL - No md5 found in hash for: 4f1kA
 - Generate new template library
 - Run template selection against modfied template library 
 - Summarize templates: 
 - No template with A found
 - No template with C found
 - No template with H found
 - No template with L found
 - No template with E found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with H found
 - No template with L found
 - No template with X found
 - No template with X found
 - No template with A found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with C found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with A found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with A found
 - No template with E found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with A found
 - No template with G found
 - No template with H found
 - No template with I found
 - No template with J found
 - No template with K found
 - No template with L found
 - No template with M found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with F found
 - No template with O found
 - No template with G found
 - No template with H found
 - No template with I found
 - No template with J found
 - No template with K found
 - No template with L found
 - No template with M found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with F found
 - No template with O found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:2): model based on new templates
 - Send 2 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -        *****************************
 - building model based on 1shtX (41-217) was successful 
 -        ****************************************
 - building model based on 2vdkB (41-281) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:97d2e64db4226b441cfc3423f36121a1 on BC2-cluster at Fri Feb 22 12:38:45
2013

Template Search

[ start new template identification in Workspace ]

Template Description

Match

Chain

SeqId

1t6b: CRYSTAL STRUCTURE OF B. ANTHRACIS PROTECTIVE ANTIGEN COMPLEXED WITH HUMAN ANTHRAX TOXIN RECEPTOR
Solved by: X-RAY, Resolution: 2.50A, Identified by BLAST
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-210

1t6bY

93%

1tzn: CRYSTAL STRUCTURE OF THE ANTHRAX TOXIN PROTECTIVE ANTIGEN HEPTAMERIC PREPORE BOUND TO THE VWA DOMAIN OF CMG2, AN ANTHRAX TOXIN RECEPTOR
Solved by: X-RAY, Resolution: 4.30A, Identified by BLAST
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

38-218	1tznc	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tznc SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tznf	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tznf SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tznb	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tznb SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tzne	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tzne SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tzna	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tzna SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tzno	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tzno SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tznd	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tznd SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tzng	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tzng SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tznj	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tznj SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tznm	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tznm SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tzni	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tzni SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tznl	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tznl SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tznh	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tznh SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]
38-218	1tznk	93%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRLSFIVFSSQATIILPLTGDRYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNAGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDFEQAQLERIADSKDQVFPVKGGFQALKGIINSILAQSC >1tznk SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSC [Model]

1sht: CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR A DOMAIN OFHUMAN CAPILLARY MORPHOGENESIS PROTEIN 2: AN ANTHRAX TOXINRECEPTOR
Solved by: X-RAY, Resolution: 1.81A, Identified by BLAST
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-217

1shtX

93%

1shu: CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR A DOMAIN OFHUMAN CAPILLARY MORPHOGENESIS PROTEIN 2: AN ANTHRAX TOXINRECEPTOR
Solved by: X-RAY, Resolution: 1.50A, Identified by BLAST
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

38-218

1shuX

93%

4hqf: CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM TRAP, I4 FORM
Solved by: X-RAY, Resolution: 2.25A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

38-221

4hqfA

21%

4hqk: CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM TRAP, P4212 FOR
Solved by: X-RAY, Resolution: 2.25A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	38-221	4hqkA	21%	>target -SCKKAFDLYFVLDKSGSVAN-NW-IEIYNFVHQLTERF-VSP-EMRLSFIVFSSQATIILPLTGD----RYKIGKGLEDLKAV-KPVGETYIHEGLKLANEQIQNAG-GLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVL-DFEQAQLERIADS-----KDQVFPVKGGFQALKGIINSILAQSCTEI-- >4hqkA EVCNDEVDLYLLMDGSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNNAREIIRLHSDASKNKEKALIIIKSLLSTNLPYGKTSLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSIQ--DSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADS-AWENVKNVIGPFMKAVCVEVEK [Model]
	38-221	4hqkB	20%	>target -SCKKAFDLYFVLDKSGSVAN-NW-IEIYNFVHQLTERF-VSP-EMRLSFIVFSSQATIILPLTGD----RYKIGKGLEDLKAVK-PVGETYIHEGLKLANEQIQNA-GGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLD-FEQAQLERIADSK---D--QVFPVKGGFQALKGIINSILAQSCTEI- >4hqkB EVCNDEVDLYLLMDGSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNNAREIIRLHSDASKNKEKALIIIKSLLSTNLPYGKTSLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSI--QDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYADSA-WENVKNVIGPFMKAVCVEVE [Model]

4hqn: CRYSTAL STRUCTURE OF MANGANESE-LOADED PLASMODIUM VIVAX TRA
Solved by: X-RAY, Resolution: 2.24A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	36-223	4hqnA	20%	>target ------QPSCKKAFDLYFVLDKSGSVAN-NWI-EIYNFVHQLTERF-VSP-EMRLSFIVFSSQATIILPLTG----DRYKIGKGLEDLKAV-KPVGETYIHEGLKLANEQIQNA-GGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLD-FEQAQLERIADSKD-----QVFPVKGGFQALKGIINSILAQSCTEILE----------------------------------------------- >4hqnA DEVKYSEEVCNEQVDLYLLVDGSGSIGYPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSYTTELIRLGSGQSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPNSKY--RALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAGCRPREPNCKFYSYA-DWNEAVALIKPFIAKVCTEVERVANCGPWDPWTACSVTCGRGTHSRSRPSLHEKCTTHMVSECEEGECP [Model]
	35-224	4hqnB	19%	>target -------EQPSCKKAFDLYFVLDKSGSVAN-NW-IEIYNFVHQLTERF-VSP-EMRLSFIVFSSQATIILPLTGD----RYKIGKGLEDLKAVK-PVGETYIHEGLKLANEQIQNA-GGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLD-FEQAQLERIADSKD-----QVFPVKGGFQALKGIINSILAQSCTEILEL---------------------------------------------- >4hqnB VVDEVKYSEEVCNEQVDLYLLVDGSGSIGYPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSYTTELIRLGSGQSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPNSKY--RALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAGCRPREPNCKFYSYA-DWNEAVALIKPFIAKVCTEVERVANCGPWDPWTACSVTCGRGTHSRSRPSLHEKCTTHMVSECEEGECP [Model]

4hql: CRYSTAL STRUCTURE OF MAGNESIUM-LOADED PLASMODIUM VIVAX TRA
Solved by: X-RAY, Resolution: 2.24A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	36-223	4hqlA	20%	>target ------QPSCKKAFDLYFVLDKSGSVAN-NWI-EIYNFVHQLTERF-VSP-EMRLSFIVFSSQATIILPLTG----DRYKIGKGLEDLKAV-KPVGETYIHEGLKLANEQIQNA-GGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLD-FEQAQLERIADSKD-----QVFPVKGGFQALKGIINSILAQSCTEILE----------------------------------------------- >4hqlA DEVKYSEEVCNEQVDLYLLVDGSGSIGYPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSYTTELIRLGSGQSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPNSKY--RALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAGCRPREPNCKFYSYA-DWNEAVALIKPFIAKVCTEVERVANCGPWDPWTACSVTCGRGTHSRSRPSLHEKCTTHMVSECEEGECP [Model]
	35-224	4hqlB	19%	>target -------EQPSCKKAFDLYFVLDKSGSVAN-NW-IEIYNFVHQLTERF-VSP-EMRLSFIVFSSQATIILPLTGD----RYKIGKGLEDLKAVK-PVGETYIHEGLKLANEQIQNA-GGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLD-FEQAQLERIADSKD-----QVFPVKGGFQALKGIINSILAQSCTEILEL---------------------------------------------- >4hqlB VVDEVKYSEEVCNEQVDLYLLVDGSGSIGYPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSYTTELIRLGSGQSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPNSKY--RALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAGCRPREPNCKFYSYA-DWNEAVALIKPFIAKVCTEVERVANCGPWDPWTACSVTCGRGTHSRSRPSLHEKCTTHMVSECEEGECP [Model]

4hqo: CRYSTAL STRUCTURE OF PLASMODIUM VIVAX TRAP PROTEIN
Solved by: X-RAY, Resolution: 2.19A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	35-225	4hqoA	19%	>target -----EQPSCKKAFDLYFVLDKSGSVAN-NWI-EIYNFVHQLTERF-VSP-EMRLSFIVFSSQATIILPLTGD----RYKIGKGLEDLKAVK-PVGETYIHEGLKLANEQIQNA-GGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLD-FEQAQLERIADSKD-----QVFPVKGGFQALKGIINSILAQSCTEILELS------------------------------------------------ >4hqoA DEVKYSEEVCNEQVDLYLLVDGSGSIGYPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSYTTELIRLGSGQSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPNSKY--RALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAGCRPREPNCKFYSYA-DWNEAVALIKPFIAKVCTEVERVANCGPWDPWTACSVTCGRGTHSRSRPSLHEKCTTHMVSECEEGECPHHH [Model]
	34-224	4hqoB	19%	>target ---------QEQPSCKKAFDLYFVLDKSGSVAN-NWI-EIYNFVHQLTERF-VSP-EMRLSFIVFSSQATIILPLTGD----RYKIGKGLEDLKAV-KPVGETYIHEGLKLANEQIQN-AGGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLD-FEQAQLERIADSKD-----QVFPVKGGFQALKGIINSILAQSCTEILEL----------------------------------------------- >4hqoB DEKVVDEVKYSEEVCNEQVDLYLLVDGSGSIGYPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSYTTELIRLGSGQSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPNSKY--RALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAGCRPREPNCKFYSYAD-WNEAVALIKPFIAKVCTEVERVANCGPWDPWTACSVTCGRGTHSRSRPSLHEKCTTHMVSECEEGECPH [Model]

1dzi: INTEGRIN ALPHA2 I DOMAIN / COLLAGEN COMPLEX
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

42-210

1dziA

14%

1v7p: STRUCTURE OF EMS16-ALPHA2-I DOMAIN COMPLEX
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

43-219

1v7pC

14%

1aox: I DOMAIN FROM INTEGRIN ALPHA2-BETA1
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	38-227	1aoxA	14%	>target SCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF-VSP-EMRLSFIVFSSQATIILPLTGD--RYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNA---GGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLD----------FEQAQLERIADSK--DQVFPVKGGFQALKGIINSILAQSCTEILELSPS- >1aoxA SCPSLIDVVVVCDESNSIY-PWDAVKNFLEKFVQGLDIGPTKTQVGLIQYANNPRVVFNLNTYKTKEEMIVATSQTSQY-GGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGESHDGSML--KAVIDQCNHDNILRFGIAVLGYLNRNALDTKNLIKEIKAIASIPTERYFFNVSD-EAALLEKAGTLGEQIF----SIEGGT [Model]
	37-219	1aoxB	15%	>target -PSCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF-VSP-EMRLSFIVFSSQATIILPLTGD--RYKIGKGLEDLKAVKPVGETYIHEGLKLANEQIQNA---GGLKASSIIIALTDGKLDGLVPSYAENEAKKSRSLGASVYCVGVLDF----------EQAQLERIADSK--DQVFPVKGGFQALKGIINSILAQSCT--- >1aoxB RSSCPSLIDVVVVCDESNSIY-PWDAVKNFLEKFVQGLDIGPTKTQVGLIQYANNPRVVFNLNTYKTKEEMIVATSQTSQY-GGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGESHDGSML--KAVIDQCNHDNILRFGIAVLGYLNRNALDTKNLIKEIKAIASIPTERYFFNVSD-EAALLEKAGTLGEQIFSIEG [Model]

3fcs: STRUCTURE OF COMPLETE ECTODOMAIN OF INTEGRIN AIIBB3
Solved by: X-RAY, Resolution: 2.55A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	41-212	3fcsB	12%	>target ---------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQ------------------------------ATIILPLTGDRYKIGKGLEDLKAV----KPVGETYIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD----------------------GL------VPSY--AENEAKKSRSLGA-SVYCVGVLDFEQ-AQLERIADSKDQVFPVKGGFQALKGIINS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >3fcsB GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGG---FDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPG-TTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECCKG [Model]
	41-189	3fcsD	12%	>target ----------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGETY----IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------GLVP--------SY--AENEAKKSRSLGA-SVYCVGVLDFEQ-AQLERI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >3fcsD GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSV---SRNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKK [Model]

2vdk: RE-REFINEMENT OF INTEGRIN ALPHAIIBBETA3 HEADPIECE
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-281

2vdkB

12%

[Model]

2vdo: INTEGRIN ALPHAIIBBETA3 HEADPIECE BOUND TO FIBRINOGEN GAMMACHAIN PEPTIDE, HHLGGAKQAGDV
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-281

2vdoB

12%

[Model]

2vdr: INTEGRIN ALPHAIIBBETA3 HEADPIECE BOUND TO A CHIMERIC FIBRINOGEN GAMMA CHAIN PEPTIDE, LGGAKQRGDV
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-281

2vdrB

12%

[Model]

3fcu: STRUCTURE OF HEADPIECE OF INTEGRIN AIIBB3 IN OPEN CONFORMATION
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-281	3fcuB	12%	>target -------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGETY--IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------GLVP--------SY--AENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA----------------------------------------------------- >3fcuB GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCR [Model]
41-281	3fcuD	12%	>target -------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGETY--IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------GLVP--------SY--AENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA----------------------------------------------------- >3fcuD GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCR [Model]
41-281	3fcuF	12%	>target -------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGETY--IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------GLVP--------SY--AENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA----------------------------------------------------- >3fcuF GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCR [Model]

2vdp: INTEGRIN ALPHAIIBBETA3 HEADPIECE BOUND TO FIBRINOGEN GAMMACHAIN PEPTIDE,LGGAKQAGDV
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-281

2vdpB

12%

[Model]

2vdq: INTEGRIN ALPHAIIBBETA3 HEADPIECE BOUND TO A CHIMERIC FIBRINOGEN GAMMA CHAIN PEPTIDE, HHLGGAKQRGDV
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-281

2vdqB

12%

[Model]

2vdn: RE-REFINEMENT OF INTEGRIN ALPHAIIBBETA3 HEADPIECE BOUND TOANTAGONIST EPTIFIBATIDE
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-281

2vdnB

12%

[Model]

1l5g: CRYSTAL STRUCTURE OF THE EXTRACELLULAR SEGMENT OF INTEGRINAVB3 IN COMPLEX WITH AN ARG-GLY-ASP LIGAND
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-189

1l5gB

11%

>target-------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVG-ETY--IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLERI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->1l5gBEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS--RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDREPYMTENTCNRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKG

[Model]

2vc2: RE-REFINEMENT OF INTEGRIN ALPHAIIBBETA3 HEADPIECE BOUND TOANTAGONIST L-739758
Solved by: X-RAY, Resolution: 3.1A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-281

2vc2B

11%

[Model]

2vdm: RE-REFINEMENT OF INTEGRIN ALPHAIIBBETA3 HEADPIECE BOUND TOANTAGONIST TIROFIBAN
Solved by: X-RAY, Resolution: 2.9A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-281

2vdmB

11%

[Model]

3nid: THE CLOSED HEADPIECE OF INTEGRIN ALPHAIIB BETA3 AND ITS COAN ALPAHIIB BETA3 -SPECIFIC ANTAGONIST THAT DOES NOT INDU
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	41-281	3nidB	11%	>target -------------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGET--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA---------------------------------------------------------- >3nidB GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYGK----IRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGW [Model]
	40-281	3nidD	11%	>target ------------------------------------------------------------------------------------------------------------KKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGET--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA--------------------------------------------------------------- >3nidD GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQC [Model]

3ije: CRYSTAL STRUCTURE OF THE COMPLETE INTEGRIN ALHAVBETA3 ECTODOMAIN PLUS AN ALPHA/BETA TRANSMEMBRANE FRAGMENT
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-211

3ijeB

11%

>target-------------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQ------------------------------ATIILPLTGDRYKIGKGLEDLKAV----KPVGETYIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLERIADSKDQVFPVKGGFQALKGIIN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->3ijeBGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGG---FDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPG-TTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILV

[Model]

3nig: THE CLOSED HEADPIECE OF INTEGRIN IIB 3 AND ITS COMPLEX WITSPECIFIC ANTAGONIST THAT DOES NOT INDUCE OPENING
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	41-281	3nigB	11%	>target -------------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGET--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA---------------------------------------------------------- >3nigB GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYGK----IRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGW [Model]
	40-281	3nigD	11%	>target ------------------------------------------------------------------------------------------------------------KKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGET--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA--------------------------------------------------------------- >3nigD GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQC [Model]

1tye: STRUCTURAL BASIS FOR ALLOSTERY IN INTEGRINS AND BINDING OFLIGAND-MIMETIC THERAPEUTICS TO THE PLATELET RECEPTOR FOR FIBRINOGEN
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

40-281	1tyeB	11%	>target ------------------------------------------------------------------------------------------------------------KKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGETY--IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLERIADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA-------------------------------- >1tyeB GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPG-TTVGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQ [Model]
40-281	1tyeD	11%	>target ------------------------------------------------------------------------------------------------------------KKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGETY--IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLERIADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA-------------------------------- >1tyeD GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPG-TTVGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQ [Model]
40-281	1tyeF	11%	>target ------------------------------------------------------------------------------------------------------------KKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGETY--IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLERIADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA-------------------------------- >1tyeF GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPG-TTVGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQ [Model]

2vdl: RE-REFINEMENT OF INTEGRIN ALPHAIIBBETA3 HEADPIECE
Solved by: X-RAY, Resolution: 2.9A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-281

2vdlB

11%

[Model]

1u8c: A NOVEL ADAPTATION OF THE INTEGRIN PSI DOMAIN REVEALED FROITS CRYSTAL STRUCTURE
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-190

1u8cB

11%

>target----------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQ------------------------------ATIILPLTGDRYKIGKGLEDLKAVKPVGETYI---HEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLERIA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->1u8cBGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS--RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDREPYMTENTCNRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKG

[Model]

1jv2: CRYSTAL STRUCTURE OF THE EXTRACELLULAR SEGMENT OF INTEGRINALPHAVBETA3
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-189

1jv2B

11%

>target-------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVG-ETY--IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLERI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->1jv2BEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS--RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDREPYMTENTCNRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKG

[Model]

4g1e: CRYSTAL STRUCTURE OF INTEGRIN ALPHA V BETA 3 WITH COIL-COI
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

40-213

4g1eB

11%

>target----------------------------------------------------------------------------------------------------------KKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQ------------------------------ATIILPLTGDRYKIGKGLEDLKAVKPVGE--T--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGAS-VYCVGVLDFEQ-AQLERIADSKDQVFPVKGGFQALKGIINSI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->4g1eBGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSV---SRNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPG-TTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPAQCKKKLQALKKKNAQLKWKLQAL

[Model]

3nif: THE CLOSED HEADPIECE OF INTEGRIN IIB 3 AND ITS COMPLEX WITSPECIFIC ANTAGONIST THAT DOES NOT INDUCE OPENING
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	41-281	3nifB	11%	>target -------------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGET--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA---------------------------------------------------------- >3nifB GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYGK----IRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGW [Model]
	41-281	3nifD	11%	>target -------------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGET--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA----------------------------------------------------------- >3nifD GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTT--VGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWL [Model]

4g1m: RE-REFINEMENT OF ALPHA V BETA 3 STRUCTURE
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-212

4g1mB

11%

>target-------------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGETY---IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGAS-VYCVGVLDFEQ-AQLERIADSKDQVFPVKGGFQALKGIINS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->4g1mBGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSV--SRNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPG-TTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGP

[Model]

3t3p: A NOVEL HIGH AFFINITY INTEGRIN ALPHAIIBBETA3 RECEPTOR ANTAUNEXPECTEDLY DISPLACES MG2+ FROM THE BETA3 MIDAS
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	40-281	3t3pD	11%	>target ------------------------------------------------------------------------------------------------------------KKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGET--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA--------------------------------------------------------------- >3t3pD GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQC [Model]
	41-281	3t3pB	11%	>target -------------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGET--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA---------------------------------------------------------- >3t3pB GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYGK----IRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGW [Model]

3t3m: A NOVEL HIGH AFFINITY INTEGRIN ALPHAIIBBETA3 RECEPTOR ANTAUNEXPECTEDLY DISPLACES MG2+ FROM THE BETA3 MIDAS
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	41-281	3t3mB	11%	>target -------------------------------------------------------------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGET--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA---------------------------------------------------------- >3t3mB GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYGK----IRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGW [Model]
	40-281	3t3mD	11%	>target ------------------------------------------------------------------------------------------------------------KKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVGET--YIHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLER-IADSKDQVFPVKGGFQALKGIINSILAQSCTEIL-ELSPSSVCVGEKFQVVLTGRAVTSISHDGSVLCT-FTANSTYTKSEKPVSIQPSSILCPA--------------------------------------------------------------- >3t3mD GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS-RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGT--TVGVLSMDSSNVLQLIVDAYG----KIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSI-----EAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQC [Model]

1m1x: CRYSTAL STRUCTURE OF THE EXTRACELLULAR SEGMENT OF INTEGRINALPHA VBETA3 BOUND TO MN2+
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

41-189

1m1xB

11%

>target-------------------------------------------------------KAFDLYFVLDKSGSVANNWIEIYNFVHQLTERF--VSPEMRLSFIVFSSQA------------------------------TIILPLTGDRYKIGKGLEDLKAVKPVG-ETY--IHEGLKLAN---EQIQNAGGLKASSIIIALTDGKLD--------------------------------GLVPSYAENEAKKSRSLGA-SVYCVGVLDFEQ-AQLERI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->1m1xBEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVS--RNRDAPEGGFDAIMQATVCDEKIGW--RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP--SLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDREPYMTENTCNRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKG

[Model]

Downloads

download model.tgz

Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.