SWISS-MODEL Repository - Model Details

Model Overview
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1
554

Sequence
UniProt Q75LR2
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
DAHP_synth_2

Model 3D Structure
Model information:
Modelled residue range: 92 to 534
Based on template: [ 2b7o ]  
Sequence Identity [%]: 45%
Model date: 2008-08-29
Revision date: 2008-08-29

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-29. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    92                            PARWAVDS WRTKKALQLP EYPNAAELEA
2b7oA     65535  gaxnwtvdip idqlpslppl ptdlrtrlda alakpaaqqp twpadqal-a
                                                                      
TARGET                                   hhhhhhh hh            hhhhhh 
2b7oA                                  hhhhhhhhh hh            hhhhh h


TARGET    120   VLKTIEAFPP IVFAGEARHL EERLADAAMG RAFLLQGGDC AESFKEFNGN
2b7oA     49    xrtvlesvpp vtvpseivrl qeqlaqvakg eafllqggdc aetfxdntep
                                                                      
TARGET            hhh         hhhhhhh hhhhhhhh     ssssss           hh
2b7oA           hhhhh          hhhhhh hhhhhhhh     ssssss           hh


TARGET    170   NIRDTFRVLL QMSAVLTFGG QMPVIKVGRM AGQFAKPRSE AFEERDGVKL
2b7oA     98    hirgnvrall qxavvltyga sxpvvkvari agqyakprsa di---dalgl
                                                                      
TARGET          hhhhhhhhhh hhhhhhhhhh   ssssssss    sss               
2b7oA           hhhhhhhhhh hhhhhhhhhh   ssssssss    sss     ss   s   s


TARGET    220   PSYRGDNING DAFNEKSRIP DPQRMVRAYA QSAATLNLLR AFATGGYAAM
2b7oA     145   rsyrgdxing fapdaaareh dpsrlvraya nasaaxnlvr altssglasl
                                                                      
TARGET             sss         hhhh     hhhhhhhh hhhhhhhhhh hh       h
2b7oA           ss sss         hhh      hhhhhhhh hhhhhhhhhh hhh      h


TARGET    270   QRVTQWNLDF TQHSEQGDRY RELAHRVDEA LGFMSAAGLT VDHPLMTSTD
2b7oA     195   hlvhdwnref vrtspagary ealateidrg lrfxsacgva drn--lqtae
                                                                      
TARGET          hhhhhhhhhh hhh        hhhhhhhhhh hhhhhh               
2b7oA           hhhhhhhhhh hhh        hhhhhhhhhh hhhhhh               


TARGET    320   FWTSHECLLL PYEQSLTRQD ---STTGHFY DCSAHMLWVG ERTRQLDGAH
2b7oA     243   iyashealvl dyeraxlrls dgddgepqlf dlsahtvwig ertrqidgah
                                                                      
TARGET           sss     h hhhhhsssss        sss ss    sss          hh
2b7oA            sss     h hhhhhsssss        sss ss    sss          hh


TARGET    367   VEFLRGVANP LGIKVSDKMN PTELVKLIEI LNPSNKPGRI TIITRMGAEN
2b7oA     293   iafaqvianp vgvklgpnxt pelaveyver ldphnkpgrl tlvsrxgnhk
                                                                      
TARGET          hhhhhh     sssss      hhhhhhhhhh h       ss sssss     
2b7oA           hhhhhh     sssss      hhhhhhhhhh h       ss sssss     


TARGET    417   MRVKLPHLIR AVRHAGQIVT WITDPMHGNT IKAPCGLKTR PFDSI-AEVR
2b7oA     343   vrdllppive kvqatghqvi wqcdpxhgnt hesstgfktr hfdrivdevq
                                                                      
TARGET          hhhhhhhhhh hhhh     s ssss       sss   sss   hhh    hh
2b7oA           hhhhhhhhhh hhhh     s ssss       sss   sss   hhhhhhhhh


TARGET    466   AFFDVHDQEG SHPGGVHLEM TGQNVTECIG GSRTVTFDDL GDRYHTHCDP
2b7oA     393   gffevhralg thpggihvei tgenvt---- ---------l agryetacdp
                                                                      
TARGET          hhhhhhhhh     sssssss s                               
2b7oA           hhhhhhhhh     sssssss s                               


TARGET    516   RLNASQSLEL SFIIAERLR                                  
2b7oA     443   rlntqqslel aflvaexlrd                                 
                                                                      
TARGET           ssshhhhhh hhhhhhhhh                                  
2b7oA            ssshhhhhh hhhhhhhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: caa3cef485c678574523d89f53ceead2 on BC2-cluster at Fri Aug 29 18:51:49 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>caa3cef485c678574523d89f53ceead2
********************************************************************************
>2b7oA Evalue:0 SeqID:45.638 Method:HHSEARCH Type:MODEL
-------------*********************************************************--****----


TEMPLATE ID    START          STOP           METHOD         STATUS         
2b7oA          92             534            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: caa3cef485c678574523d89f53ceead2 on gopt-58.cluster.bc2.ch BC2-Cluster at
Fri Aug 29 18:56:28 2008


Template Description
Match Chain SeqId

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Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.