SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures

Sequence
UniProt Q8TA83 DnaJ homolog dnj-10 (DnaJ domain protein 10)
Caenorhabditis elegans.
Database: Swiss-Prot (Reviewed) manually annotated and reviewed

STRING
Q8TA83: 6239.F22B7.5a.1

Domain
Link to: [ InterPro ]
DnaJ
DnaJ_CXXCXGXG
CTDII

Model 3D Structure
Model information:
Modelled residue range: 41 to 110
Based on template: [ 2dn9 ]  
Sequence Identity [%]: 61%
Model date: 2013-11-23
Revision date: 2013-11-19

Quaternary structure information: [details]
Template (2dn9): MONOMER
Model: MONOMER

Ligand information: [details]
Ligands in the template: none.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2013-11-19. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment

TARGET    1           SKED YYKTLGVDKK SDAKAIKKAY FQLAKKYHPD VNKTK-EAQT
2dn9_1#4  1     gssg--ssgd yyqilgvprn asqkeikkay yqlakkyhpd tnkddpkake
                                                                      
TARGET                     hhhhh        hhhhhhhh hhhhhh             hh
2dn9_1#4                   hhhhh        hhhhhhhh hhhhhh           hhhh


TARGET    44    KFQEISEAYE VLSDDTKRQE YDAYGSG -- -                    
2dn9_1#4  49    kfsqlaeaye vlsdevkrkq ydaygsgpss g                    
                                                                      
TARGET          hhhhhhhhhh hh   hhhhh hhh                             
2dn9_1#4        hhhhhhhhhh hh   hhhhh hhh                             



Quality


Template's ligands section
Template without ligands.
No ligands were included in the model.


Quaternary Structure Annotation of the Template
2dn9 is annotated as MONOMER
The template structure (2dn9) was solved by NMR and does not contain any quaternary structure annotation
The template is annotated by the number of chains found in the PDB file

Quaternary Structure Modelling of the Target Protein
The quaternary structure can be assumed to be identical
Model was succesfully built as MONOMER.


Template Selection
 - Start SMR-Pipeline for:361fe91d7c3e43c102dacc75d4727278 on BC2-cluster at Sat Nov 23 17:55:32
2013 


 - Analyze BLAST summary ... 
 - Blast template search was successfull, number of templates selected for modeling:  1
 - But still uncovered regions of the target sequence detected, go for: HHSEARCH

 - Run HHSearch to detect more templates...
FATAL - No md5 found in hash for: 2lgwA
FATAL - No md5 found in hash for: 3ucsC
FATAL - No md5 found in hash for: 3ucsC
FATAL - No md5 found in hash for: 3ucsD
FATAL - No md5 found in hash for: 2m6yA
FATAL - No md5 found in hash for: 2m6yA
FATAL - No md5 found in hash for: 2lo1A
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with A found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with A found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:5): model based on new templates
 - Send 5 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -        ************
 - building model based on 2dn9A (41-110) was successful 
 -        ******************
 - building model based on 4j7zD (41-142) was successful 
 -                                *************
 - building model based on 1exkA (178-253) was successful 
 -                               *********************************
 - building model based on 1nltA (171-357) was successful 
 -        ***********************************************************
 - building model based on 4j80B (41-379) was not successful go to next best template
 -        ***********************************************************
 - building model based on 4j80A (41-379) was not successful go to next best template
 -        ***********************************************************
 - building model based on 4j80D (41-379) was not successful go to next best template
 -        ***********************************************************
 - building model based on 4j80C (41-379) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:361fe91d7c3e43c102dacc75d4727278 on BC2-cluster at Sat Nov 23 18:06:55
2013 




Template Description
Match Chain SeqId

2dn9: SOLUTION STRUCTURE OF J-DOMAIN FROM THE DNAJ HOMOLOG, HUMATID1 PROTEIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-110 2dn9A 62%
[Model]
40-112 2dn9A 59%
[Model]

1bq0: J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAFRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJNMR, 20 STRUCTURES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-116 1bq0A 55%
[Model]

1bqz: J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAFRAGMENT (RESIDUES 1-78) OF THE MOLECULAR CHAPERONE DNAJ,NMR, 20 STRUCTURES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-116 1bqzA 55%
[Model]

1xbl: NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-114 1xblA 53%
[Model]

2kqx: NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-72) IN THE ESCHERICHIA COLI CBPA
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-110 2kqxA 49%
[Model]

2ctw: SOLUTION STRUCTURE OF J-DOMAIN FROM MOUSE DNAJ SUBFAMILY CMENBER 5
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-114 2ctwA 49%
[Model]

2ctr: SOLUTION STRUCTURE OF J-DOMAIN FROM HUMAN DNAJ SUBFAMILY BMENBER 9
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-117 2ctrA 49%
[Model]

2ej7: SOLUTION STRUCTURE OF THE DNAJ DOMAIN OF THE HUMAN PROTEINHCG3, A HYPOTHETICAL PROTEIN TMP_LOCUS_21
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

36-112 2ej7A 47%
[Model]

1hdj: HUMAN HSP40 (HDJ-1), NMR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-115 1hdjA 47%
[Model]

2cug: SOLUTION STRUCTURE OF THE J DOMAIN OF THE PSEUDO DNAJ PROTEIN, MOUSE HYPOTHETICAL MKIAA0962
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

40-113 2cugA 46%
[Model]

2och: J-DOMAIN OF DNJ-12 FROM CAENORHABDITIS ELEGANS
Solved by: X-RAY, Resolution: 1.86A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-108 2ochA 46%
[Model]

2ctp: SOLUTION STRUCTURE OF J-DOMAIN FROM HUMAN DNAJ SUBFAMILY BMENBER 12
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

40-112 2ctpA 45%
[Model]

2y4t: CRYSTAL STRUCTURE OF THE HUMAN CO-CHAPERONE P58(IPK)
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-101 2y4tA 44%
[Model]
42-101 2y4tB 44%
[Model]
42-101 2y4tC 44%
[Model]

2y4u: CRYSTAL STRUCTURE OF HUMAN P58(IPK) IN SPACE GROUP P312
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-101 2y4uA 44%
[Model]

2dmx: SOLUTION STRUCTURE OF THE J DOMAIN OF DNAJ HOMOLOG SUBFAMILY B MEMBER 8
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

36-117 2dmxA 44%
[Model]

2o37: J-DOMAIN OF SIS1 PROTEIN, HSP40 CO-CHAPERONE FROM SACCHAROMYCES CEREVISIAE.
Solved by: X-RAY, Resolution: 1.25A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-117 2o37A 40%
[Model]

3apq: CRYSTAL STRUCTURE OF J-TRX1 FRAGMENT OF ERDJ5
Solved by: X-RAY, Resolution: 1.84A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-117 3apqA 38%
[Model]
43-115 3apqB 41%
[Model]

2qsa: CRYSTAL STRUCTURE OF J-DOMAIN OF DNAJ HOMOLOG DNJ-2 PRECURSOR FROM C.ELEGANS.
Solved by: X-RAY, Resolution: 1.68A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

39-110 2qsaA 36%
[Model]

2yua: SOLUTION STRUCTURE OF THE DNAJ DOMAIN FROM HUMAN WILLIAMS-BEUREN SYNDROME CHROMOSOME REGION 18 PROTEIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

37-113 2yuaA 35%
[Model]

1wjz: SOLUIOTN STRUCTURE OF J-DOMAIN OF MOUSE DNAJ LIKE PROTEIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-110 1wjzA 31%
[Model]

2l6l: SOLUTION STRUCTURE OF HUMAN J-PROTEIN CO-CHAPERONE, DPH4
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

39-108 2l6lA 30%
[Model]

2ctq: SOLUTION STRUCTURE OF J-DOMAIN FROM HUMAN DNAJ SUBFAMILY CMENBER 12
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

34-113 2ctqA 27%
[Model]

3apo: CRYSTAL STRUCTURE OF FULL-LENGTH ERDJ5
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-110 3apoA 26%
[Model]

2ys8: SOLUTION STRUCTURE OF THE DNAJ-LIKE DOMAIN FROM HUMAN RAS-ASSOCIATED PROTEIN RAP1
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-103 2ys8A 25%
[Model]

2ctt: SOLUTION STRUCTURE OF ZINC FINGER DOMAIN FROM HUMAN DNAJ SUBFAMILY A MENBER 3
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

161-267 2cttA 33%
[Model]
187-242 2cttA 25%
[Model]
204-255 2cttA 25%
[Model]

1exk: SOLUTION STRUCTURE OF THE CYSTEINE-RICH DOMAIN OF THE ESCHERICHIA COLI CHAPERONE PROTEIN DNAJ.
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

178-257 1exkA 39%
[Model]
187-242 1exkA 25%
[Model]
205-254 1exkA 28%
[Model]

1nlt: THE CRYSTAL STRUCTURE OF HSP40 YDJ1
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

159-370 1nltA 23%
[Model]
189-241 1nltA 21%
[Model]
327-368 1nltA 14%
[Model]

1nz6: CRYSTAL STRUCTURE OF AUXILIN J-DOMAIN
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-104 1nz6A 21%
[Model]
44-104 1nz6B 20%
[Model]

1n4c: NMR STRUCTURE OF THE J-DOMAIN AND CLATHRIN SUBSTRATE BINDING DOMAIN OF BOVINE AUXILIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-104 1n4cA 20%
[Model]

1iur: DNAJ DOMAIN OF HUMAN KIAA0730 PROTEIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-111 1iurA 19%
[Model]

2qwq: CRYSTAL STRUCTURE OF DISULFIDE-BOND-CROSSLINKED COMPLEX OFBOVINE HSC70 (1-394AA)R171C AND BOVINE AUXILIN (810-910AAD876C IN THE AMPPNP HYDROLYZED FORM
Solved by: X-RAY, Resolution: 2.21A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-98 2qwqB 19%
[Model]

3bvo: CRYSTAL STRUCTURE OF HUMAN CO-CHAPERONE PROTEIN HSCB
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-108 3bvoA 18%
[Model]
41-106 3bvoB 19%
[Model]

3lz8: STRUCTURE OF A PUTATIVE CHAPERONE DNAJ FROM KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE MGH 78578 AT 2.9 A RESOLUTIO
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

159-389 3lz8B 15%
[Model]
159-388 3lz8A 16%
[Model]
259-290 3lz8A 18%
[Model]
259-290 3lz8B 19%
[Model]
298-368 3lz8A 21%
[Model]
298-368 3lz8B 20%
[Model]

2pf4: CRYSTAL STRUCTURE OF THE FULL-LENGTH SIMIAN VIRUS 40 SMALLT ANTIGEN COMPLEXED WITH THE PROTEIN PHOSPHATASE 2A AALPHSUBUNIT
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-110 2pf4E 19%
[Model]

2qwo: CRYSTAL STRUCTURE OF DISULFIDE-BOND-CROSSLINKED COMPLEX OFBOVINE HSC70 (1-394AA)R171C AND BOVINE AUXILIN (810-910AAD876C IN THE ADP*PI FORM
Solved by: X-RAY, Resolution: 2.21A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-98 2qwoB 19%
[Model]

1gh6: RETINOBLASTOMA POCKET COMPLEXED WITH SV40 LARGE T ANTIGEN
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-113 1gh6A 19%
[Model]

1fpo: HSC20 (HSCB), A J-TYPE CO-CHAPERONE FROM E. COLI
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-109 1fpoA 23%
[Model]
44-109 1fpoB 23%
[Model]
44-105 1fpoC 19%
[Model]

2qwn: CRYSTAL STRUCTURE OF DISULFIDE-BOND-CROSSLINKED COMPLEX OFBOVINE HSC70 (1-386AA)R171C AND BOVINE AUXILIN (810-910AAD876C IN THE ADP*PI STATE
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-98 2qwnB 19%
[Model]

2qwr: CRYSTAL STRUCTURE OF DISULFIDE-BOND-CROSSLINKED COMPLEX OFBOVINE HSC70 (1-394AA)R171C AND BOVINE AUXILIN (810-910AAD876C IN THE AMPPNP INTACT FORM
Solved by: X-RAY, Resolution: 2.21A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-98 2qwrB 19%
[Model]

1faf: NMR STRUCTURE OF THE N-TERMINAL J DOMAIN OF MURINE POLYOMAVIRUS T ANTIGENS.
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-108 1fafA 19%
[Model]

2qwp: CRYSTAL STRUCTURE OF DISULFIDE-BOND-CROSSLINKED COMPLEX OFBOVINE HSC70 (1-394AA)R171C AND BOVINE AUXILIN (810-910AAD876C IN THE ADP*PI FORM
Solved by: X-RAY, Resolution: 2.21A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-98 2qwpB 19%
[Model]

3ag7: AN AUXILIN-LIKE J-DOMAIN CONTAINING PROTEIN, JAC1 J-DOMAIN
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-97 3ag7A 17%
[Model]

3agx: CRYSTAL STRUCTURE OF HUMAN HSP40 HDJ1 PEPTIDE-BINDING DOMA
Solved by: X-RAY, Resolution: 1.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

166-290 3agxB 14%
[Model]
158-290 3agxA 10%
[Model]
166-386 3agxA 14%
[Model]
256-386 3agxB 20%
[Model]
304-367 3agxA 17%
[Model]
304-367 3agxB 17%
[Model]

3uo3: JAC1 CO-CHAPERONE FROM SACCHAROMYCES CEREVISIAE, 5-182 CLO
Solved by: X-RAY, Resolution: 1.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-110 3uo3A 19%
[Model]
63-107 3uo3B 16%
[Model]

3uo2: JAC1 CO-CHAPERONE FROM SACCHAROMYCES CEREVISIAE
Solved by: X-RAY, Resolution: 2.13A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-106 3uo2A 17%
[Model]
62-108 3uo2B 16%
[Model]

2b26: THE CRYSTAL STRUCTURE OF THE PROTEIN COMPLEX OF YEAST HSP4SIS1 AND HSP70 SSA1
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

163-290 2b26B 9%
[Model]
162-381 2b26A 12%
[Model]
258-381 2b26B 17%
[Model]
259-290 2b26A 7%
[Model]
301-349 2b26B 14%
[Model]
300-367 2b26A 14%
[Model]
158-290 2b26C 6%
[Model]
252-381 2b26C 15%
[Model]

2guz: STRUCTURE OF THE TIM14-TIM16 COMPLEX OF THE MITOCHONDRIAL PROTEIN IMPORT MOTOR
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-102 2guzA 15%
[Model]
44-98 2guzB 14%
[Model]
38-102 2guzC 15%
[Model]
44-98 2guzD 14%
[Model]
38-102 2guzE 15%
[Model]
44-98 2guzF 14%
[Model]
38-102 2guzG 15%
[Model]
44-98 2guzH 14%
[Model]
38-102 2guzI 15%
[Model]
44-98 2guzJ 14%
[Model]
38-102 2guzK 15%
[Model]
44-98 2guzL 14%
[Model]
38-102 2guzM 15%
[Model]
44-98 2guzN 14%
[Model]
38-102 2guzO 15%
[Model]
44-98 2guzP 14%
[Model]

3agz: CRYSTAL STRUCTURE OF HUMAN HSP40 HDJ1 PEPTIDE-BINDING DOMAWITH A C-TERMINAL PEPTIDE OF HSP70
Solved by: X-RAY, Resolution: 2.51A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

158-386 3agzA 13%
[Model]
159-386 3agzB 13%
[Model]
258-290 3agzA 14%
[Model]
258-290 3agzB 14%
[Model]
297-368 3agzB 15%
[Model]
296-370 3agzA 16%
[Model]

2qld: HUMAN HSP40 HDJ1
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

162-381 2qldA 14%
[Model]
258-290 2qldA 14%
[Model]
301-368 2qldA 16%
[Model]

3i38: STRUCTURE OF A PUTATIVE CHAPERONE PROTEIN DNAJ FROM KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE MGH 78578
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

158-290 3i38C 10%
[Model]
158-290 3i38E 10%
[Model]
158-290 3i38L 10%
[Model]
158-290 3i38A 10%
[Model]
158-290 3i38D 10%
[Model]
158-290 3i38G 10%
[Model]
158-290 3i38J 10%
[Model]
158-290 3i38K 10%
[Model]
158-290 3i38H 10%
[Model]
158-290 3i38B 10%
[Model]
158-290 3i38F 10%
[Model]
158-290 3i38I 10%
[Model]
292-388 3i38A 22%
[Model]
292-388 3i38D 22%
[Model]
292-388 3i38G 22%
[Model]
291-389 3i38K 21%
[Model]
292-388 3i38B 22%
[Model]
292-388 3i38J 22%
[Model]
292-388 3i38F 22%
[Model]
293-388 3i38C 22%
[Model]
293-388 3i38E 22%
[Model]
293-388 3i38L 22%
[Model]
294-388 3i38H 22%
[Model]
293-388 3i38I 22%
[Model]

3agy: CRYSTAL STRUCTURE OF HUMAN HSP40 HDJ1 PEPTIDE-BINDING DOMAWITH A C-TERMINAL PEPTIDE OF HSP70
Solved by: X-RAY, Resolution: 1.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

158-290 3agyA 10%
[Model]
158-290 3agyB 10%
[Model]
166-386 3agyA 14%
[Model]
166-386 3agyB 14%
[Model]
304-367 3agyA 17%
[Model]
304-367 3agyB 17%
[Model]

2q2g: CRYSTAL STRUCTURE OF DIMERIZATION DOMAIN OF HSP40 FROM CRYPTOSPORIDIUM PARVUM, CGD2_1800
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

165-384 2q2gB 14%
[Model]
162-384 2q2gA 14%
[Model]
258-290 2q2gA 9%
[Model]
300-367 2q2gA 18%
[Model]
304-368 2q2gB 21%
[Model]

1xao: HSP40-YDJ1 DIMERIZATION DOMAIN
Solved by: X-RAY, Resolution: 2.07A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

158-290 1xaoB 6%
[Model]
158-290 1xaoA 6%
[Model]
294-388 1xaoB 20%
[Model]
294-388 1xaoA 20%
[Model]

1c3g: S. CEREVISIAE HEAT SHOCK PROTEIN 40 SIS1
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

158-290 1c3gA 6%
[Model]
162-381 1c3gA 11%
[Model]
300-368 1c3gA 12%
[Model]

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Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.