SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures

Sequence
UniProt Q9EPW9
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
LRR_1
LRR_1
TIR
LRR_7
LRR_8

Model 3D Structure
Model information:
Modelled residue range: 630 to 785
Based on template: [ 1fyv ]  
Sequence Identity [%]: 81%
Model date: 2013-02-22
Revision date: 2013-01-30

Quaternary structure information: [details]
Template (1fyv): MONOMER
Model: MONOMER

Ligand information: [details]
Ligands in the template: none.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2013-01-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment

TARGET    1       HIPLEELQ RNLQFHAFVS YSEHDSAWVK NELLPNLEKD DIRVCLHERN
1fyv_1#6  625     nipleelq rnlqfhafis ysghdsfwvk nellpnleke gxqiclhern
                                                                      
TARGET                          sssss       hhhh hhhhhh               
1fyv_1#6                        sssss       hhhh hhhhhh               


TARGET    49    FVPGKSIVEN IINFIEKSYK AIFVLSPHFI QSEWCHYELY FAHHNLFHEG
1fyv_1#6  673   fvpgksiven iitcieksyk sifvlspnfv qsewchyely fahhnlfheg
                                                                      
TARGET                hhhh hhhhhhh  s sssss hhhh h   hhhhhh h         
1fyv_1#6               hhh hhhhhhh  s sssss hhhh h   hhhhhh h         


TARGET    99    SDNLILILLE PILQNNIPSR YHKLRALMAQ RTYLEWPTEK GKRGLFWANL
1fyv_1#6  723   snslilille pipqysipss yhklkslxar rtylewpkek skrglfwanl
                                                                      
TARGET            sssssss              hhhhhhhh     sss         hhhhhh
1fyv_1#6          sssssss               hhhhhhh     sss         hhhhhh


TARGET    149   RASFIMKL - ---                                        
1fyv_1#6  773   raainiklte qak                                        
                                                                      
TARGET          hhhhh                                                 
1fyv_1#6        hhhhh                                                 



Quality


Template's ligands section
Template without ligands.
No ligands were included in the model.


Quaternary Structure Annotation of the Template
1fyv is annotated as MONOMER
The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry
The following biological unit was used to build the template structure: 1fyv.pdb1.gz

Quaternary Structure Modelling of the Target Protein
The quaternary structure can be assumed to be identical
Model was succesfully built as MONOMER.


Template Selection
 - Start SMR-Pipeline for:4c7d2641b782d84a3035900d3f836eeb on BC2-cluster at Fri Feb 22 18:04:58
2013 


 - Analyze BLAST summary ... 
 - Blast template search was successfull, number of templates selected for modeling:  2
 - But still uncovered regions of the target sequence detected, go for: HHSEARCH

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modfied template library 
 - Summarize templates: 
 - No template with C found
 - No template with E found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with A found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with A found
 - No template with C found
 - No template with D found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with A found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with A found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with A found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
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 - No template with B found
 - No template with D found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with K found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with J found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with J found
 - No template with A found
 - No template with B found
 - No template with D found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with K found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with A found
 - No template with B found
 - No template with D found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with K found
 - No template with A found
 - No template with B found
 - No template with D found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with K found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with J found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with A found
 - No template with B found
 - No template with D found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with K found
 - No template with A found
 - No template with B found
 - No template with D found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with K found
 - No template with A found
 - No template with B found
 - No template with D found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with K found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with J found
 - No template with A found
 - No template with B found
 - No template with D found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with K found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with J found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with J found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with J found
 - No template with A found
 - No template with B found
 - No template with D found
 - No template with G found
 - No template with F found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with K found
 - No template with C found
 - No template with E found
 - No template with I found
 - No template with H found
 - No template with L found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with F found
 - No template with J found
 - No template with D found
 - No template with B found
 - No template with A found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:4): model based on new templates
 - Send 4 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -    *****************************************************
 - building model based on 3a79B (33-561) was not successful go to next best template
 -                                                                ****************
 - building model based on 1fyvA (630-785) was successful 
 -    *****************************************************
 - building model based on 3a79B (33-561) was not successful go to next best template
 -    ***************************************************
 - building model based on 2z7xB (33-541) was successful 
 -                                        **********************
 - building model based on 3j0aB (384-600) was not successful go to next best template
 -                                    ********************
 - building model based on 2o6qA (352-554) was successful 
 -                                      *********************
 - Oligomeric modeling of 3rfjA was not successful, fall back to monomeric modeling
 - building model based on 3rfjA (371-582) was not successful go to next best template
 -                                        ****************************************
 - building model based on 3j0aA (384-777) was successful 
 -    *******************************************************
 - building model based on 3cigA (34-578) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:4c7d2641b782d84a3035900d3f836eeb on BC2-cluster at Fri Feb 22 18:16:27
2013 




Template Description
Match Chain SeqId

3a79: CRYSTAL STRUCTURE OF TLR2-TLR6-PAM2CSK4 COMPLEX
Solved by: X-RAY, Resolution: 2.90A, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

33-561 3a79B 88%
[Model]

1fyv: CRYSTAL STRUCTURE OF THE TIR DOMAIN OF HUMAN TLR1
Solved by: X-RAY, Resolution: 2.90A, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

630-785 1fyvA 81%
[Model]

2j67: THE TIR DOMAIN OF HUMAN TOLL-LIKE RECEPTOR 10 (TLR10)
Solved by: X-RAY, Resolution: 2.20A, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

636-780 2j67A 67%
[Model]
638-780 2j67B 65%
[Model]

2z63: CRYSTAL STRUCTURE OF THE TV8 HYBRID OF HUMAN TLR4 AND HAGFISH VLRB.61
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

102-533 2z63A 13%
[Model]
122-532 2z63A 13%
[Model]
149-311 2z63A 17%
[Model]
33-573 2z63A 17%
[Model]
349-462 2z63A 20%
[Model]
34-418 2z63A 16%
[Model]
34-441 2z63A 17%
[Model]
34-486 2z63A 16%
[Model]
350-379 2z63A 10%
[Model]
349-417 2z63A 25%
[Model]
349-392 2z63A 20%
[Model]
34-539 2z63A 17%
[Model]
54-584 2z63A 16%
[Model]
77-533 2z63A 16%
[Model]
272-288 2z63A 12%
[Model]

3ul9: STRUCTURE OF THE TV3 MUTANT M41E
Solved by: X-RAY, Resolution: 2.45A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

105-162 3ul9A 24%
[Model]
126-169 3ul9A 16%
[Model]
333-574 3ul9A 19%
[Model]
349-463 3ul9A 20%
[Model]
348-486 3ul9A 21%
[Model]
33-117 3ul9A 26%
[Model]
34-184 3ul9A 21%
[Model]
349-509 3ul9A 22%
[Model]
353-532 3ul9A 18%
[Model]
35-165 3ul9A 25%
[Model]
377-533 3ul9A 18%
[Model]
404-530 3ul9A 23%
[Model]
429-532 3ul9A 25%
[Model]
56-162 3ul9A 21%
[Model]
82-159 3ul9A 17%
[Model]

2z65: CRYSTAL STRUCTURE OF THE HUMAN TLR4 TV3 HYBRID-MD-2- ERITORAN COMPLEX
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

98-163 2z65A 21%
[Model]
121-182 2z65A 16%
[Model]
333-574 2z65A 19%
[Model]
348-463 2z65A 19%
[Model]
348-486 2z65A 21%
[Model]
34-136 2z65A 25%
[Model]
349-509 2z65A 22%
[Model]
353-532 2z65A 18%
[Model]
35-149 2z65A 24%
[Model]
377-531 2z65A 19%
[Model]
403-532 2z65A 23%
[Model]
428-532 2z65A 24%
[Model]
56-163 2z65A 21%
[Model]
54-157 2z65A 27%
[Model]
74-160 2z65A 16%
[Model]
98-163 2z65B 21%
[Model]
121-182 2z65B 16%
[Model]
333-574 2z65B 19%
[Model]
348-463 2z65B 19%
[Model]
348-486 2z65B 21%
[Model]
34-136 2z65B 25%
[Model]
349-509 2z65B 22%
[Model]
353-532 2z65B 18%
[Model]
35-149 2z65B 24%
[Model]
377-531 2z65B 19%
[Model]
403-532 2z65B 23%
[Model]
428-532 2z65B 24%
[Model]
56-163 2z65B 21%
[Model]
54-157 2z65B 27%
[Model]
74-160 2z65B 16%
[Model]

2z62: CRYSTAL STRUCTURE OF THE TV3 HYBRID OF HUMAN TLR4 AND HAGFISH VLRB.61
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

98-163 2z62A 21%
[Model]
121-182 2z62A 16%
[Model]
333-574 2z62A 19%
[Model]
348-463 2z62A 19%
[Model]
348-486 2z62A 21%
[Model]
34-136 2z62A 25%
[Model]
349-509 2z62A 22%
[Model]
353-532 2z62A 18%
[Model]
35-149 2z62A 24%
[Model]
377-531 2z62A 19%
[Model]
403-532 2z62A 23%
[Model]
428-532 2z62A 24%
[Model]
56-163 2z62A 21%
[Model]
54-157 2z62A 27%
[Model]
74-160 2z62A 16%
[Model]

4b8c: NUCLEASE MODULE OF THE YEAST CCR4-NOT COMPLEX
Solved by: X-RAY, Resolution: 3.41A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

100-161 4b8cJ 15%
[Model]
99-185 4b8cD 24%
[Model]
119-202 4b8cD 17%
[Model]
123-162 4b8cJ 10%
[Model]
333-391 4b8cD 20%
[Model]
354-464 4b8cD 20%
[Model]
350-462 4b8cJ 18%
[Model]
357-489 4b8cJ 19%
[Model]
351-484 4b8cJ 19%
[Model]
349-405 4b8cJ 25%
[Model]
349-444 4b8cD 16%
[Model]
35-136 4b8cJ 27%
[Model]
34-136 4b8cD 27%
[Model]
351-417 4b8cJ 18%
[Model]
349-417 4b8cD 17%
[Model]
37-167 4b8cJ 25%
[Model]
378-487 4b8cD 23%
[Model]
405-513 4b8cJ 23%
[Model]
403-514 4b8cD 23%
[Model]
404-546 4b8cJ 16%
[Model]
427-534 4b8cD 22%
[Model]
430-532 4b8cJ 22%
[Model]
450-532 4b8cD 27%
[Model]
450-532 4b8cJ 14%
[Model]
475-532 4b8cD 15%
[Model]
54-158 4b8cD 29%
[Model]
53-186 4b8cJ 18%
[Model]
72-185 4b8cD 21%
[Model]
77-161 4b8cJ 25%
[Model]
100-161 4b8cL 15%
[Model]
99-185 4b8cK 24%
[Model]
119-202 4b8cK 17%
[Model]
123-162 4b8cL 10%
[Model]
333-391 4b8cK 20%
[Model]
354-464 4b8cK 20%
[Model]
350-462 4b8cL 18%
[Model]
357-489 4b8cL 19%
[Model]
351-484 4b8cL 19%
[Model]
349-405 4b8cL 25%
[Model]
349-444 4b8cK 16%
[Model]
35-136 4b8cL 27%
[Model]
34-136 4b8cK 27%
[Model]
351-417 4b8cL 18%
[Model]
349-417 4b8cK 17%
[Model]
37-167 4b8cL 25%
[Model]
378-487 4b8cK 23%
[Model]
405-513 4b8cL 23%
[Model]
403-514 4b8cK 23%
[Model]
404-546 4b8cL 16%
[Model]
427-534 4b8cK 22%
[Model]
430-532 4b8cL 22%
[Model]
450-532 4b8cK 27%
[Model]
450-532 4b8cL 14%
[Model]
475-532 4b8cK 15%
[Model]
54-158 4b8cK 29%
[Model]
53-186 4b8cL 18%
[Model]
72-185 4b8cK 21%
[Model]
77-161 4b8cL 25%
[Model]
147-161 4b8cK 20%
[Model]
147-161 4b8cD 20%
[Model]

4g8a: CRYSTAL STRUCTURE OF HUMAN TLR4 POLYMORPHIC VARIANT D299G COMPLEX WITH MD-2 AND LPS
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

106-186 4g8aA 22%
[Model]
104-532 4g8aB 13%
[Model]
124-229 4g8aA 16%
[Model]
125-533 4g8aB 14%
[Model]
151-532 4g8aB 15%
[Model]
150-532 4g8aA 15%
[Model]
32-578 4g8aB 18%
[Model]
33-578 4g8aA 18%
[Model]
35-417 4g8aB 16%
[Model]
35-417 4g8aA 15%
[Model]
34-441 4g8aA 16%
[Model]
34-441 4g8aB 17%
[Model]
34-463 4g8aA 18%
[Model]
34-463 4g8aB 17%
[Model]
34-486 4g8aA 16%
[Model]
353-532 4g8aB 22%
[Model]
34-535 4g8aB 17%
[Model]
34-536 4g8aA 17%
[Model]
54-534 4g8aB 16%
[Model]
55-534 4g8aA 16%
[Model]
34-527 4g8aB 16%
[Model]
378-532 4g8aA 21%
[Model]
427-531 4g8aB 20%
[Model]
427-532 4g8aA 21%
[Model]
428-532 4g8aA 19%
[Model]
451-533 4g8aB 14%
[Model]
469-531 4g8aB 10%
[Model]
471-532 4g8aA 19%
[Model]
80-532 4g8aA 17%
[Model]
75-532 4g8aB 16%
[Model]

2z66: CRYSTAL STRUCTURE OF THE VT3 HYBRID OF HUMAN TLR4 AND HAGFISH VLRB.61
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

120-157 2z66A 24%
[Model]
26-578 2z66A 13%
[Model]
333-534 2z66A 18%
[Model]
35-187 2z66A 23%
[Model]
354-531 2z66A 21%
[Model]
357-532 2z66A 18%
[Model]
34-156 2z66A 23%
[Model]
35-167 2z66A 25%
[Model]
35-159 2z66A 22%
[Model]
375-452 2z66A 18%
[Model]
380-532 2z66A 20%
[Model]
428-531 2z66A 21%
[Model]
432-532 2z66A 22%
[Model]
453-532 2z66A 17%
[Model]
53-164 2z66A 22%
[Model]
120-157 2z66B 24%
[Model]
26-578 2z66B 13%
[Model]
333-534 2z66B 18%
[Model]
35-187 2z66B 23%
[Model]
354-531 2z66B 21%
[Model]
357-532 2z66B 18%
[Model]
34-156 2z66B 23%
[Model]
35-167 2z66B 25%
[Model]
35-159 2z66B 22%
[Model]
375-452 2z66B 18%
[Model]
380-532 2z66B 20%
[Model]
428-531 2z66B 21%
[Model]
432-532 2z66B 22%
[Model]
453-532 2z66B 17%
[Model]
53-164 2z66B 22%
[Model]
120-157 2z66C 24%
[Model]
26-578 2z66C 13%
[Model]
333-534 2z66C 18%
[Model]
35-187 2z66C 23%
[Model]
354-531 2z66C 21%
[Model]
357-532 2z66C 18%
[Model]
34-156 2z66C 23%
[Model]
35-167 2z66C 25%
[Model]
35-159 2z66C 22%
[Model]
375-452 2z66C 18%
[Model]
380-532 2z66C 20%
[Model]
428-531 2z66C 21%
[Model]
432-532 2z66C 22%
[Model]
453-532 2z66C 17%
[Model]
53-164 2z66C 22%
[Model]
120-157 2z66D 24%
[Model]
26-578 2z66D 13%
[Model]
333-534 2z66D 18%
[Model]
35-187 2z66D 23%
[Model]
354-531 2z66D 21%
[Model]
357-532 2z66D 18%
[Model]
34-156 2z66D 23%
[Model]
35-167 2z66D 25%
[Model]
35-159 2z66D 22%
[Model]
375-452 2z66D 18%
[Model]
380-532 2z66D 20%
[Model]
428-531 2z66D 21%
[Model]
432-532 2z66D 22%
[Model]
453-532 2z66D 17%
[Model]
53-164 2z66D 22%
[Model]

3ula: CRYSTAL STRUCTURE OF THE TV3 MUTANT F63W-MD-2-ERITORAN COM
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

105-163 3ulaC 22%
[Model]
127-182 3ulaC 18%
[Model]
334-565 3ulaC 19%
[Model]
349-463 3ulaC 20%
[Model]
349-486 3ulaC 22%
[Model]
351-440 3ulaC 18%
[Model]
34-183 3ulaC 20%
[Model]
353-508 3ulaC 22%
[Model]
353-532 3ulaC 18%
[Model]
33-159 3ulaC 20%
[Model]
34-164 3ulaC 25%
[Model]
377-532 3ulaC 19%
[Model]
404-531 3ulaC 23%
[Model]
58-114 3ulaC 21%
[Model]
75-162 3ulaC 16%
[Model]
105-163 3ulaA 22%
[Model]
127-182 3ulaA 18%
[Model]
334-565 3ulaA 19%
[Model]
349-463 3ulaA 20%
[Model]
349-486 3ulaA 22%
[Model]
351-440 3ulaA 18%
[Model]
34-183 3ulaA 20%
[Model]
353-508 3ulaA 22%
[Model]
353-532 3ulaA 18%
[Model]
33-159 3ulaA 20%
[Model]
34-164 3ulaA 25%
[Model]
377-532 3ulaA 19%
[Model]
404-531 3ulaA 23%
[Model]
58-114 3ulaA 21%
[Model]
75-162 3ulaA 16%
[Model]

3fxi: CRYSTAL STRUCTURE OF THE HUMAN TLR4-HUMAN MD-2-E.COLI LPS RA COMPLEX
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

100-532 3fxiB 14%
[Model]
100-532 3fxiA 14%
[Model]
125-532 3fxiB 14%
[Model]
125-532 3fxiA 14%
[Model]
150-532 3fxiB 14%
[Model]
150-532 3fxiA 14%
[Model]
33-577 3fxiB 18%
[Model]
33-577 3fxiA 18%
[Model]
271-380 3fxiB 9%
[Model]
271-380 3fxiA 9%
[Model]
271-392 3fxiB 17%
[Model]
271-392 3fxiA 17%
[Model]
272-416 3fxiB 21%
[Model]
272-416 3fxiA 21%
[Model]
349-463 3fxiB 23%
[Model]
349-463 3fxiA 23%
[Model]
35-116 3fxiB 22%
[Model]
35-116 3fxiA 22%
[Model]
34-441 3fxiB 16%
[Model]
34-441 3fxiA 16%
[Model]
34-535 3fxiB 17%
[Model]
34-535 3fxiA 17%
[Model]
55-534 3fxiB 16%
[Model]
55-534 3fxiA 16%
[Model]
34-525 3fxiB 16%
[Model]
34-525 3fxiA 16%
[Model]
75-533 3fxiB 17%
[Model]
75-533 3fxiA 17%
[Model]
272-289 3fxiB 11%
[Model]
272-289 3fxiA 11%
[Model]

4glp: THE CRYSTAL STRUCTURE OF SOLUBLE HUMAN CD14 REVEALS A BENTWITH A HYDROPHOBIC AMINO-TERMINAL POCKET.
Solved by: X-RAY, Resolution: 4.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

121-158 4glpA 21%
[Model]
332-366 4glpA 17%
[Model]
352-463 4glpA 21%
[Model]
350-487 4glpA 24%
[Model]
354-440 4glpA 22%
[Model]
352-416 4glpA 17%
[Model]
353-390 4glpA 16%
[Model]
352-509 4glpA 17%
[Model]
353-532 4glpA 15%
[Model]
355-532 4glpA 13%
[Model]
377-532 4glpA 18%
[Model]
451-531 4glpA 15%
[Model]
52-166 4glpA 14%
[Model]
52-161 4glpA 18%
[Model]
76-184 4glpA 13%
[Model]

3ul8: CRYSTAL STRUCTURE OF THE TV3 MUTANT V134L
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

105-161 3ul8A 25%
[Model]
334-565 3ul8A 19%
[Model]
350-463 3ul8A 20%
[Model]
348-486 3ul8A 21%
[Model]
349-442 3ul8A 17%
[Model]
33-116 3ul8A 26%
[Model]
34-184 3ul8A 21%
[Model]
359-416 3ul8A 19%
[Model]
353-532 3ul8A 18%
[Model]
35-163 3ul8A 25%
[Model]
377-532 3ul8A 19%
[Model]
404-531 3ul8A 23%
[Model]
455-508 3ul8A 25%
[Model]
56-162 3ul8A 21%
[Model]
75-161 3ul8A 17%
[Model]

3ul7: CRYSTAL STRUCTURE OF THE TV3 MUTANT F63W
Solved by: X-RAY, Resolution: 2.37A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

105-163 3ul7A 22%
[Model]
127-169 3ul7A 16%
[Model]
347-574 3ul7A 18%
[Model]
348-463 3ul7A 19%
[Model]
348-486 3ul7A 21%
[Model]
33-116 3ul7A 26%
[Model]
36-136 3ul7A 25%
[Model]
352-509 3ul7A 22%
[Model]
354-531 3ul7A 18%
[Model]
35-163 3ul7A 25%
[Model]
378-532 3ul7A 19%
[Model]
403-532 3ul7A 23%
[Model]
429-531 3ul7A 24%
[Model]
57-162 3ul7A 21%
[Model]
81-161 3ul7A 18%
[Model]

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.