SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures

Sequence
UniProt Q9U489 Protein lin-41 (Abnormal cell lineage protein 41)
Caenorhabditis elegans.
Database: Swiss-Prot (Reviewed) manually annotated and reviewed

STRING
Q9U489: 6239.C12C8.3a

Domain
Link to: [ InterPro ]
Filamin
NHL
NHL
NHL
NHL
NHL
NHL

Model 3D Structure
Model information:
Modelled residue range: 824 to 919
Based on template: [ 3fvz ]  
Sequence Identity [%]: 33%
Model date: 2014-07-16
Revision date: 2014-07-15

Quaternary structure information: [details]
Template (3fvz): MONOMER
Model built: SINGLE CHAIN

Ligand information: [details]
Ligands in the template: GOL: 2.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment

                                                       
3fvzA     492   hhhhhhdfhv eeeldwpgvy llpgqvsgva ldsknnlvif hrgdhvwdgn
                                                                      
                                                       
3fvzA                 ssss sss    hh      ssssss ss   sssss ss        


                                                       
3fvzA     542   sfdskfvyqq rglgpieedt ilvidpnnae ilqssgknlf ylphglsidt
                                                                      
                                                       
3fvzA           sss   sss           s sssss    s sssss       ssssssss 


TARGET    1                         D EIAAKGPILT FGK---EGSG DGELCRPWGI
3fvzA     592   dgnywvtdva lhqvfkl--d phskegplli lgrsmqpgsd qnhfcqptdv
                                                                      
TARGET                                                              ss
3fvzA             sssssss    sssss            ss s                  ss


TARGET    29    CVD-QRGRVI VADR-SNNRV QIFDKDGNFI SKFGT--S-- GNRPGQFDRP
3fvzA     640   avepstgavf vsdgycnsri vqfspsgkfv tqwgeessgs sprpgqfsvp
                                                                      
TARGET          s       ss ssss   sss ssss   sss ssshh  h   h      sss
3fvzA           sss    sss sss    sss ssss   sss sssss             sss


TARGET    73    AGITTNSLN- NIVVADKDNH RVQVF ---- ---------- ----------
3fvzA     690   hslalvphld qlcvadreng riqcfktdtk efvreikhas fgrnvfaisy
                                                                      
TARGET          ssssss     ssssssss   sssss                           
3fvzA           ssssss   s ssssssss   sssssss    ssssss           ssss


TARGET          ---------- ---------- ---------- ---------- ----------
3fvzA     740   ipgflfavng kpyfgdqepv qgfvmnfssg eiidvfkpvr khfdmphdiv
                                                                      
TARGET                                                                
3fvzA           s ssssss               ssssss    ssssss         ssssss


TARGET          ---------- ---------- ---------- -                    
3fvzA     790   asedgtvyig dahtntvwkf tltekmehrs v                    
                                                                      
TARGET                                                                
3fvzA           ss  ssssss ss   sssss sssss                           



Quality


Template's ligands section
Ligands in the template: GOL: 2.
The template contains ligands that are not yet part of the pipeline. Ligands which are currently assessed are listed in the help page.
No ligands were included in the model.


Quaternary Structure Annotation of the Template
3fvz is annotated as MONOMER
The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry
The following biological unit was used to build the template structure: 3fvz.pdb1.gz

Quaternary Structure Modelling of the Target Protein
The target and template sequences are too diverse (seqid: 33.962) to infer a conservation of the oligomeric state
Please use the advancend features of the SwissModel Project Mode

The target structure was calculated as SINGLE CHAIN


Template Selection
 - Start SMR-Pipeline for:3f8ab73484fdb769038270bf2f68a84e on BC2-cluster at Wed Jul 16 19:59:29
2014 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
 - No template with F found
 - No template with E found
 - No template with F found
 - No template with E found
 - No template with F found
 - No template with E found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with E found
 - No template with E found
 - No template with B found
 - No template with D found
 - No template with B found
 - No template with D found
 - No template with B found
 - No template with D found
 - No template with B found
 - No template with D found
 - No template with B found
 - No template with D found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with F found
 - No template with B found
 - No template with D found
 - No template with E found
 - No template with F found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with F found
 - No template with B found
 - No template with D found
 - No template with F found
 - No template with B found
 - No template with D found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with F found
 - No template with A found
 - No template with B found
 - No template with D found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with D found
 - No template with C found
 - No template with C found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:6): model based on new templates
 - Send 6 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                                                          *******
 - building model based on 3fvzA (824-919) was successful 
 -                                                              **************
 - building model based on 1q7fA (881-1079) was successful 
 -                                                           ****************
 - building model based on 1q7fA (835-1065) was successful 
 -                                                            *********************
 - building model based on 4j82B (848-1147) was successful 
 -                                    *********
 - building model based on 4nqjC (508-637) was successful 
 -                  **
 - building model based on 3mkqE (242-271) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:3f8ab73484fdb769038270bf2f68a84e on BC2-cluster at Wed Jul 16 20:06:29
2014 




Template Description
Match Chain SeqId

4d0k: COMPLEX OF CHAETOMIUM THERMOPHILUM PAN2 (WD40-CS1) WITH PA
Solved by: X-RAY, Resolution: 1.89A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

843-1018 4d0kA 9%
[Model]
848-1023 4d0kA 8%
[Model]
848-1147 4d0kA 8%
[Model]
858-1066 4d0kA 12%
[Model]
997-1008 4d0kA 33%
[Model]
1045-1056 4d0kA 33%
[Model]

4j84: CRYSTAL STRUCTURE OF BETA'-COP/SCYL1 COMPLEX
Solved by: X-RAY, Resolution: 1.47A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

846-1070 4j84A 11%
[Model]
847-1063 4j84A 9%
[Model]
847-1015 4j84A 9%
[Model]
847-1147 4j84A 14%
[Model]
848-882 4j84A 6%
[Model]
854-967 4j84A 5%
[Model]
893-1147 4j84A 10%
[Model]
846-1073 4j84B 11%
[Model]
848-1073 4j84B 15%
[Model]
849-1025 4j84B 9%
[Model]
847-1015 4j84B 8%
[Model]
854-930 4j84B 4%
[Model]
893-1147 4j84B 10%
[Model]
1041-1064 4j84A 8%
[Model]
1041-1064 4j84B 8%
[Model]
995-1015 4j84B 23%
[Model]

4pbz: STRUCTURE OF THE HUMAN RBAP48-MTA1(670-695) COMPLEX
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

848-1066 4pbzA 10%
[Model]
896-1065 4pbzA 14%
[Model]
897-967 4pbzA 16%
[Model]

3odt: CRYSTAL STRUCTURE OF WD40 BETA PROPELLER DOMAIN OF DOA1
Solved by: X-RAY, Resolution: 1.35A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

848-1071 3odtA 9%
[Model]
857-1068 3odtA 10%
[Model]
853-1019 3odtA 9%
[Model]
848-1147 3odtA 8%
[Model]
850-921 3odtA 15%
[Model]
848-969 3odtA 16%
[Model]
1040-1066 3odtB 19%
[Model]
850-1068 3odtB 10%
[Model]
847-1072 3odtB 8%
[Model]
848-1063 3odtB 10%
[Model]
853-1018 3odtB 9%
[Model]
1123-1147 3odtB 24%
[Model]
1041-1063 3odtA 17%
[Model]

4pby: STRUCTURE OF THE HUMAN RBAP48-MTA1(656-686) COMPLEX
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

895-1065 4pbyA 14%
[Model]
896-1065 4pbyB 14%
[Model]
848-1065 4pbyA 10%
[Model]
849-1065 4pbyB 10%
[Model]
943-967 4pbyA 15%
[Model]
943-1064 4pbyB 12%
[Model]
943-1064 4pbyA 13%
[Model]

2ynp: YEAST BETAPRIME COP 1-604 WITH KTKTN MOTIF
Solved by: X-RAY, Resolution: 2.96A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

845-883 2ynpA 5%
[Model]
851-929 2ynpA 5%
[Model]
847-976 2ynpA 7%
[Model]
1120-1144 2ynpA 15%
[Model]
962-976 2ynpA 31%
[Model]
916-929 2ynpA 33%
[Model]
848-858 2ynpA 27%
[Model]
894-909 2ynpA 13%
[Model]

2yb8: CRYSTAL STRUCTURE OF NURF55 IN COMPLEX WITH SU(Z)12
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

848-1064 2yb8B 10%
[Model]
896-1065 2yb8B 15%
[Model]
993-1017 2yb8B 12%
[Model]

3c99: STRUCTURAL BASIS OF HISTONE H4 RECOGNITION BY P55
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

847-1066 3c99A 10%
[Model]
858-1065 3c99A 15%
[Model]
898-1017 3c99A 12%
[Model]

3c9c: STRUCTURAL BASIS OF HISTONE H4 RECOGNITION BY P55
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

847-1066 3c9cA 10%
[Model]
858-1065 3c9cA 15%
[Model]
898-1017 3c9cA 12%
[Model]

2xyi: CRYSTAL STRUCTURE OF NURF55 IN COMPLEX WITH A H4 PEPTIDE
Solved by: X-RAY, Resolution: 1.75A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

848-1065 2xyiA 10%
[Model]
895-1065 2xyiA 15%
[Model]
992-1017 2xyiA 11%
[Model]

3gfc: CRYSTAL STRUCTURE OF HISTONE-BINDING PROTEIN RBBP4
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

848-1065 3gfcA 9%
[Model]
897-1016 3gfcA 12%
[Model]
944-1064 3gfcA 15%
[Model]
992-1147 3gfcA 11%
[Model]

2yba: CRYSTAL STRUCTURE OF NURF55 IN COMPLEX WITH HISTONE H3
Solved by: X-RAY, Resolution: 2.55A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

847-1066 2ybaA 11%
[Model]
848-1018 2ybaA 10%
[Model]
895-1065 2ybaA 15%
[Model]
992-1017 2ybaA 11%
[Model]
848-1065 2ybaB 10%
[Model]
895-1065 2ybaB 15%
[Model]
993-1016 2ybaB 8%
[Model]

3cfv: STRUCTURAL BASIS OF THE INTERACTION OF RBAP46/RBAP48 WITH HISTONE H4
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

849-1065 3cfvB 10%
[Model]
895-1065 3cfvB 16%
[Model]
990-1017 3cfvB 10%
[Model]
848-1065 3cfvA 10%
[Model]
858-1065 3cfvA 15%
[Model]
897-967 3cfvA 15%
[Model]

3mkq: CRYSTAL STRUCTURE OF YEAST ALPHA/BETAPRIME-COP SUBCOMPLEX VESICULAR COAT
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

242-271 3mkqA 7%
[Model]
849-1144 3mkqE 10%
[Model]
847-874 3mkqC 14%
[Model]
847-882 3mkqA 5%
[Model]
895-920 3mkqA 4%
[Model]
904-958 3mkqC 12%
[Model]
904-952 3mkqE 12%
[Model]
904-952 3mkqA 12%
[Model]
960-1000 3mkqC 14%
[Model]
959-1000 3mkqA 14%
[Model]
991-1147 3mkqC 9%
[Model]
242-271 3mkqE 7%
[Model]
847-858 3mkqE 25%
[Model]
1131-1142 3mkqE 25%
[Model]
847-858 3mkqA 25%
[Model]
1132-1139 3mkqC 25%
[Model]
243-252 3mkqC 10%
[Model]
896-920 3mkqE 4%
[Model]
244-252 3mkqE 11%
[Model]
970-975 3mkqE 50%
[Model]
245-252 3mkqA 13%
[Model]
898-913 3mkqC 25%
[Model]

2xu7: STRUCTURAL BASIS FOR RBAP48 BINDING TO FOG-1
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

848-1065 2xu7A 10%
[Model]
850-1017 2xu7A 10%
[Model]
895-1065 2xu7A 14%
[Model]
943-1064 2xu7A 12%
[Model]
848-1065 2xu7B 9%
[Model]
850-1018 2xu7B 10%
[Model]
895-1064 2xu7B 14%
[Model]
992-1017 2xu7B 11%
[Model]

4pc0: STRUCTURE OF THE HUMAN RBAP48-MTA1(670-711) COMPLEX
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

849-1065 4pc0A 10%
[Model]
895-1065 4pc0A 14%
[Model]
943-1064 4pc0A 12%
[Model]
849-1065 4pc0B 10%
[Model]
848-1018 4pc0B 9%
[Model]
895-1065 4pc0B 14%
[Model]
943-1064 4pc0B 13%
[Model]

2ynn: YEAST BETAPRIME COP 1-304 WITH KTKTN MOTIF
Solved by: X-RAY, Resolution: 1.78A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

847-1063 2ynnA 9%
[Model]
846-1066 2ynnA 11%
[Model]
848-1016 2ynnA 8%
[Model]
848-1147 2ynnA 13%
[Model]
848-920 2ynnA 9%
[Model]
855-967 2ynnA 5%
[Model]
893-1066 2ynnA 12%
[Model]
1041-1064 2ynnA 8%
[Model]

2yno: YEAST BETAPRIME COP 1-304H6
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

847-1065 2ynoA 10%
[Model]
847-1019 2ynoA 9%
[Model]
848-1018 2ynoA 11%
[Model]
848-1147 2ynoA 13%
[Model]
848-920 2ynoA 9%
[Model]
855-967 2ynoA 5%
[Model]
893-1066 2ynoA 12%
[Model]
996-1065 2ynoA 10%
[Model]
847-1065 2ynoB 10%
[Model]
847-1019 2ynoB 9%
[Model]
848-1018 2ynoB 11%
[Model]
848-1147 2ynoB 13%
[Model]
848-920 2ynoB 9%
[Model]
855-967 2ynoB 5%
[Model]
893-1066 2ynoB 12%
[Model]
996-1065 2ynoB 10%
[Model]

4czx: COMPLEX OF NEUROSPORA CRASSA PAN2 (WD40) WITH PAN3 (C-TERM
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

850-1066 4czxA 9%
[Model]
848-1070 4czxA 8%
[Model]
844-1018 4czxA 13%
[Model]
849-1147 4czxA 7%
[Model]
1042-1062 4czxA 36%
[Model]
897-920 4czxA 8%
[Model]

4j73: CRYSTAL STRUCTURE OF BETA'-COP/P25 COMPLEX
Solved by: X-RAY, Resolution: 1.44A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

846-1072 4j73A 11%
[Model]
848-1073 4j73A 14%
[Model]
847-1025 4j73A 9%
[Model]
847-1016 4j73A 7%
[Model]
855-929 4j73A 4%
[Model]
893-1147 4j73A 10%
[Model]
1041-1065 4j73A 8%
[Model]

4nqj: STRUCTURE OF COILED-COIL DOMAIN
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

507-630 4nqjA 8%
[Model]
510-637 4nqjB 8%
[Model]
508-637 4nqjC 8%
[Model]

4czv: STRUCTURE OF THE NEUROSPORA CRASSA PAN2 WD40 DOMAIN
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

850-1066 4czvA 9%
[Model]
848-1070 4czvA 8%
[Model]
844-1018 4czvA 13%
[Model]
849-1147 4czvA 7%
[Model]
850-1066 4czvB 9%
[Model]
848-1070 4czvB 8%
[Model]
844-1018 4czvB 13%
[Model]
849-1147 4czvB 7%
[Model]
1042-1062 4czvB 36%
[Model]
1042-1062 4czvA 36%
[Model]
897-920 4czvB 8%
[Model]
897-920 4czvA 8%
[Model]

3cfs: STRUCTURAL BASIS OF THE INTERACTION OF RBAP46/RBAP48 WITH HISTONE H4
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

848-1017 3cfsB 9%
[Model]
895-1065 3cfsB 16%
[Model]
992-1016 3cfsB 8%
[Model]

4j82: CRYSTAL STRUCTURE OF BETA'-COP/INSIG-2 COMPLEX
Solved by: X-RAY, Resolution: 1.76A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

847-1063 4j82A 10%
[Model]
846-1070 4j82A 11%
[Model]
847-1016 4j82A 8%
[Model]
847-1147 4j82A 14%
[Model]
849-882 4j82A 6%
[Model]
854-967 4j82A 5%
[Model]
893-1147 4j82A 10%
[Model]
996-1066 4j82A 9%
[Model]
847-1066 4j82B 11%
[Model]
847-1063 4j82B 9%
[Model]
847-1016 4j82B 8%
[Model]
848-920 4j82B 9%
[Model]
855-967 4j82B 5%
[Model]
893-1147 4j82B 10%
[Model]
996-1066 4j82B 10%
[Model]
848-1147 4j82B 13%
[Model]

4j79: CRYSTAL STRUCTURE OF BETA'-COP/PEDVSPIKE COMPLEX
Solved by: X-RAY, Resolution: 1.56A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

846-1071 4j79A 10%
[Model]
848-1063 4j79A 9%
[Model]
847-1016 4j79A 8%
[Model]
847-1147 4j79A 14%
[Model]
848-882 4j79A 6%
[Model]
854-967 4j79A 5%
[Model]
893-1147 4j79A 10%
[Model]
1041-1064 4j79A 8%
[Model]

4j77: CRYSTAL STRUCTURE OF BETA'-COP/HWBP1 COMPLEX
Solved by: X-RAY, Resolution: 1.76A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

847-1063 4j77A 10%
[Model]
846-1070 4j77A 11%
[Model]
847-1016 4j77A 8%
[Model]
847-1147 4j77A 14%
[Model]
849-882 4j77A 6%
[Model]
854-967 4j77A 5%
[Model]
893-1147 4j77A 10%
[Model]
996-1066 4j77A 9%
[Model]
846-1071 4j77B 11%
[Model]
847-1063 4j77B 9%
[Model]
846-1016 4j77B 8%
[Model]
847-1147 4j77B 14%
[Model]
855-967 4j77B 5%
[Model]
893-1066 4j77B 12%
[Model]
995-1066 4j77B 9%
[Model]
896-919 4j77B 17%
[Model]

4j86: CRYSTAL STRUCTURE OF BETA'-COP/YWBP1 COMPLEX
Solved by: X-RAY, Resolution: 1.76A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

846-1070 4j86A 11%
[Model]
846-1063 4j86A 9%
[Model]
846-1016 4j86A 8%
[Model]
847-1147 4j86A 14%
[Model]
848-920 4j86A 9%
[Model]
855-967 4j86A 5%
[Model]
893-1147 4j86A 10%
[Model]
996-1065 4j86A 10%
[Model]
847-1063 4j86B 10%
[Model]
846-1070 4j86B 11%
[Model]
847-1016 4j86B 8%
[Model]
847-1147 4j86B 14%
[Model]
849-882 4j86B 6%
[Model]
854-967 4j86B 5%
[Model]
893-1147 4j86B 10%
[Model]
996-1066 4j86B 9%
[Model]

4j78: CRYSTAL STRUCTURE OF BETA'-COP/EMP47P COMPLEX
Solved by: X-RAY, Resolution: 1.76A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

847-1063 4j78A 10%
[Model]
846-1070 4j78A 11%
[Model]
847-1016 4j78A 8%
[Model]
847-1147 4j78A 14%
[Model]
849-882 4j78A 6%
[Model]
854-967 4j78A 5%
[Model]
893-1147 4j78A 10%
[Model]
996-1066 4j78A 9%
[Model]

4j81: CRYSTAL STRUCTURE OF BETA'-COP/INSIG-1 COMPLEX
Solved by: X-RAY, Resolution: 1.76A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

847-1063 4j81A 10%
[Model]
846-1070 4j81A 11%
[Model]
847-1016 4j81A 8%
[Model]
847-1147 4j81A 14%
[Model]
849-882 4j81A 6%
[Model]
854-967 4j81A 5%
[Model]
893-1147 4j81A 10%
[Model]
996-1066 4j81A 9%
[Model]
847-1063 4j81B 10%
[Model]
846-1070 4j81B 11%
[Model]
847-1016 4j81B 8%
[Model]
847-1147 4j81B 14%
[Model]
849-882 4j81B 6%
[Model]
854-967 4j81B 5%
[Model]
893-1147 4j81B 10%
[Model]
996-1066 4j81B 9%
[Model]

4czy: COMPLEX OF NEUROSPORA CRASSA PAN2 (WD40-CS1) WITH PAN3 (PSEUDOKINASE AND C-TERM)
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

850-1066 4czyC 10%
[Model]
850-1066 4czyA 10%
[Model]
848-1071 4czyC 9%
[Model]
848-1071 4czyA 9%
[Model]
843-1019 4czyC 12%
[Model]
843-1019 4czyA 12%
[Model]
848-1147 4czyC 8%
[Model]
848-1147 4czyA 8%
[Model]
943-968 4czyC 4%
[Model]
943-968 4czyA 4%
[Model]
1042-1056 4czyC 40%
[Model]
1042-1056 4czyA 40%
[Model]

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Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.