SWISS-MODEL Repository - Model Details

Model Overview
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1
314

Sequence
UniProt Q9UWF8
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
AA_kinase

Model 3D Structure
Model information:
Modelled residue range: 3 to 314
Based on template: [ 1e19 ]  
Sequence Identity [%]: 88%
Model date: 2008-08-29
Revision date: 2008-08-29

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-29. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    3        ERVVIAL GGNALQQRGQ KGTYEEMMEN VKKTAKQIAE IIARGYEVVI
1e19A     2     g--krvvial ggnalqqrgq kgsyeemmdn vrktarqiae iiargyevvi
                                                                      
TARGET             sssssss s             hhhhhhh hhhhhhhhhh hhh   ssss
1e19A              sssssss               hhhhhhh hhhhhhhhhh hhh   ssss


TARGET    50    THGNGPQVGT ILLHMDAGQS LHGIPAQPMD VAGAMSQGWI GYMIQQALRN
1e19A     50    thgngpqvgs lllhmdagqa tygipaqpmd vagamsqgwi gymiqqalkn
                                                                      
TARGET          s   hhhhhh hhhhhhhhhh hh      hh hhhhhhhhhh hhhhhhhhhh
1e19A           s   hhhhhh hhhhhhhhhh h       hh hhhhhhhhhh hhhhhhhhhh


TARGET    100   ELRKRGIERE VVTIVTQTIV DKDDPAFENP TKPVGPFYDE ETAKKLAKEK
1e19A     100   elrkrgmekk vvtiitqtiv dkndpafqnp tkpvgpfyde etakrlarek
                                                                      
TARGET          hhhhh    s ssss sssss      hhh    sss     h hhhhhhhhh 
1e19A           hhhhh    s ssss sssss      hh     sss     h hhhhhhhhhh


TARGET    150   GWVVKEDAGR GWRRVVPSPD PKRHVEAETI KKLVEDGVIV IASGGGGVPV
1e19A     150   gwivkedsgr gwrrvvpspd pkghveaeti kklvergviv iasggggvpv
                                                                      
TARGET            sssss    ssssss       sss hhhh hhhhh   ss s      sss
1e19A             sssss    ssssss       ssshhhhh hhhhhh  ss s      sss


TARGET    200   IEEDGEIKGV EAVIDKDLAG ERLAEEVNAD ILMILTDVNG AALYYGTEKE
1e19A     200   iledgeikgv eavidkdlag eklaeevnad ifmiltdvng aalyygteke
                                                                      
TARGET          sss  sssss      hhhhh hhhhhhh    ssssss     sss       
1e19A           sss  sssss      hhhhh hhhhhhh    ssssss     sss       


TARGET    250   TWLREVKVDE MERYYQEGHF KAGSMGPKVL AAIRFVKNGG KRAIIAHLEK
1e19A     250   qwlrevkvee lrkyyeeghf kagsmgpkvl aairfiewgg eraiiahlek
                                                                      
TARGET          sssssssshh hhhhhhh         hhhhh hhhhhhhh    sssssss  
1e19A           sssssssshh hhhhhh          hhhhh hhhhhhhh    sssssss  


TARGET    300   AVEALEGKTG TQVIP                                      
1e19A     300   avealegktg tqvlp-                                     
                                                                      
TARGET          hhhhhh     ssss                                       
1e19A           hhhhhh     ssss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: e238f93f72ae2db5629a6e3200d1db07 on BC2-cluster at Fri Aug 29 18:26:18 2008 
BLAST_TEMPLATE SELECTION SUCCESSFUL TEMPLATES FOUND:  1 GO TO MODELING STEP


############# TEMPLATES SELECTED #############

>e238f93f72ae2db5629a6e3200d1db07
*******************************************************************************
>1e19A Evalue:4.75731e-149 SeqID:88.141 Method:BLAST Type:MODEL
*******************************************************************************


TEMPLATE ID    START          STOP           METHOD         STATUS         
1e19A          3              314            BLAST          BUILT          

FINISHED PIPELINE ON ID: e238f93f72ae2db5629a6e3200d1db07 on gopt-22.cluster.bc2.ch BC2-Cluster at
Fri Aug 29 18:26:42 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.