SWISS-MODEL Repository - Model Details

Model Overview
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1
816

Sequence
UniProt Q9VKJ9
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING
Q9VKJ9: 7227.FBpp0079786

Domain
Link to: [ InterPro ]
C2

Model 3D Structure
Model information:
Modelled residue range: 539 to 570
Based on template: [ 1cjy ]  
Sequence Identity [%]: 25%
Model date: 2012-10-30
Revision date: 2012-10-15

Quaternary structure information: [details]
Template (1cjy): MONOMER
Model built: SINGLE CHAIN

Ligand information: [details]
Ligands in the template: CA: 2, MES: 1.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2012-10-15. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment

                                                       
1cjyB     1015  qyshkftvvv lratkvtkga fgdmldtpdp yvelfisttp dsrkrtrhfn
                                                                      
                                                       
1cjyB             ssssssss sssss    h hhhhh  sss sssss         sss  ss


                                                       
1cjyB     1065  ndinpvwnet fefildpnqe nvleitlmda nyvmdetlgt atftvssmkv
                                                                      
                                                       
1cjyB           s ssssssss sssss      ssssssssss      sssss sssss     


                                                       
1cjyB     1115  gekkevpfif nqvtemvlem slevcscpdl rfsmalcdqe ktfrqqrkeh
                                                                      
                                                       
1cjyB            sssssssss    sssssss sssss      sss    hhh hhhhhhhhhh


                                                       
1cjyB     1165  iresmkkllg pknseglhsa rdvpvvailg sgggframvg fsgvmkalye
                                                                      
                                                       
1cjyB           hhhhhhhhh                 ssssss s   hhhhhh hhhhhhhhhh


                                                       
1cjyB     1215  sgildcatyv aglsgstwym stlyshpdfp ekgpeeinee lmknvshnpl
                                                                      
                                                       
1cjyB              hhh sss ss   hhhhh hhhh           hhhhhh hhhhh    h


                                                       
1cjyB     1265  llltpqkvkr yveslwkkks sgqpvtftdi fgmligetli hnrmnttlss
                                                                      
                                                       
1cjyB           h   hhhhhh hhhhhhhhhh        hhh hhhhhhhhh          hh


                                                       
1cjyB     1315  lkekvntaqc plplftclhv kpdvselmfa dwvefspyei gmakygtfma
                                                                      
                                                       
1cjyB           hhh         sssssssss            ssssss  ss sss  ssss 


                                                       
1cjyB     1365  pdlfgskffm gtvvkkyeen plhflmgvwg safsilfnrv lgstmeeele
                                                                      
                                                       
1cjyB                 sss   sss         hhhhhh    hhh   hhh     hhhhh 


                                                       
1cjyB     1423  nittkhivsw ihrmimalvs dsalfntreg ragkvhnfml glndvkskk-
                                                                      
                                                       
1cjyB               hh   h hhhhhhhhhh hh           sssss           ss 


TARGET    1      LNAASSGLP VDLSTLPVPP SQRDNLEASF AIV ------ ----------
1cjyB     1545  -ihvvdsglt f---nlpypl ilrpqrgvdl iisfdfsarp sdssppfkel
                                                                      
TARGET                 hhh h                                          
1cjyB            ssss  hh                     ss sssss             hhh


TARGET          ---------- ---------- ---------- ---------- ----------
1cjyB     1591  llaekwakmn klpfpkidpy vfdreglkec yvfkpdcpti ihfvlaninf
                                                                      
TARGET                                                                
1cjyB           hhhhhhhhhh          h hhhh    ss sss     ss ssss      


TARGET          ---------- ---------- ---------- ---------- ----------
1cjyB     1648  rkyapgvpre teeekeiadf difddpespf stfnfqypnq afkrlhdlmh
                                                                      
TARGET                                                                
1cjyB            sss  sss                                hh hhhhhhhhhh


TARGET          ---------- ---------                                  
1cjyB     1699  fntlnnidvi keamvesie                                  
                                                                      
TARGET                                                                
1cjyB           hhh   hhhh hhhhhhh                                    



Quality


Template's ligands section
Ligands in the template: CA: 2, MES: 1.
Ligands in the template that will be assessed: CA1950, CA1951.
Model's ligands section
CA1950
There are not residues in the model that match the ones that interact with the ligand in the template.
Given the properties calculated previously, the ligand B.CA1950 will not be included in the final model.
CA1950: conservation:False, RMSD:False, included: False

CA1951
There are not residues in the model that match the ones that interact with the ligand in the template.
Given the properties calculated previously, the ligand B.CA1951 will not be included in the final model.
CA1951: conservation:False, RMSD:False, included: False

No ligands were included in the model.


Quaternary Structure Annotation of the Template
1cjy is annotated as MONOMER
The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry
The following biological unit was used to build the template structure: 1cjy.pdb2.gz

Quaternary Structure Modelling of the Target Protein
The target and template sequences are too diverse (seqid: 25.000) to infer a conservation of the oligomeric state
Please use the advancend features of the SwissModel Project Mode

The target structure was calculated as SINGLE CHAIN


Template Selection
 - Start SMR-Pipeline for:b0ac6a27811767100e780b50dd525f0a on BC2-cluster at Tue Oct 30 02:52:27
2012 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

FATAL - No A3m found

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modfied template library 
 - Summarize templates: 
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with A found
 - No template with C found
 - No template with C found
 - No template with D found
 - No template with B found
 - No template with A found
 - No template with A found
 - Warning: Oligomer Prediction was not successfull!

 - Proof template(s) selection compared to previous Repository update
 - Need for modeling since selected templates are the not the same as in previous update

 - Send 2 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                                                      ***
 - building model based on 1cjyB (539-570) was successful 
 -                                                                  *************
 - building model based on 2nsqA (666-794) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:b0ac6a27811767100e780b50dd525f0a on BC2-cluster at Tue Oct 30 03:42:37
2012 




Template Description
Match Chain SeqId

1cjy: HUMAN CYTOSOLIC PHOSPHOLIPASE A2
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

539-570 1cjyA 25%
[Model]
539-570 1cjyB 25%
[Model]

2nsq: CRYSTAL STRUCTURE OF THE C2 DOMAIN OF THE HUMAN E3 UBIQUITIN-PROTEIN LIGASE NEDD4-LIKE PROTEIN
Solved by: X-RAY, Resolution: 1.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

666-794 2nsqA 24%
[Model]

2dmg: SOLUTION STRUCTURE OF THE THIRD C2 DOMAIN OF KIAA1228 PROTEIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

656-787 2dmgA 23%
[Model]

3m7f: CRYSTAL STRUCTURE OF THE NEDD4 C2/GRB10 SH2 COMPLEX
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-796 3m7fB 21%
[Model]

3b7y: CRYSTAL STRUCTURE OF THE C2 DOMAIN OF THE E3 UBIQUITIN- PROTEIN LIGASE NEDD4
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-794 3b7yA 20%
[Model]
664-795 3b7yB 20%
[Model]

1djh: PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH BARIUM
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-797 1djhA 18%
[Model]
664-797 1djhB 20%
[Model]

1dji: PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH CALCIUM
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-797 1djiA 18%
[Model]
664-797 1djiB 20%
[Model]

3kwt: MUNC13-1 C2B-DOMAIN, CALCIUM-FREE
Solved by: X-RAY, Resolution: 1.89A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

663-796 3kwtA 19%
[Model]

1ugk: SOLUTION STRUCTURE OF THE FIRST C2 DOMAIN OF SYNAPTOTAGMINIV FROM HUMAN FETAL BRAIN (KIAA1342)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

658-780 1ugkA 19%
[Model]

1djy: PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH INOSITOL-2,4,5-TRISPHOSPHATE
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-797 1djyA 18%
[Model]
665-797 1djyB 19%
[Model]

3fbk: CRYSTAL STRUCTURE OF THE C2 DOMAIN OF THE HUMAN REGULATOR OF G-PROTEIN SIGNALING 3 ISOFORM 6 (RGP3), NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET HR5550A
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-796 3fbkA 21%
[Model]
654-796 3fbkB 19%
[Model]

1djg: PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH LANTHANUM
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-797 1djgA 18%
[Model]
665-797 1djgB 19%
[Model]

1djx: PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH INOSITOL-1,4,5-TRISPHOSPHATE
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-797 1djxA 18%
[Model]
665-797 1djxB 19%
[Model]

1djw: PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH INOSITOL-2-METHYLENE-1,2-CYCLIC- MONOPHOSPHONATE
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-797 1djwA 18%
[Model]
665-797 1djwB 19%
[Model]

2isd: PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-797 2isdA 18%
[Model]
665-797 2isdB 19%
[Model]

1w15: RAT SYNAPTOTAGMIN 4 C2B DOMAIN IN THE PRESENCE OF CALCIUM
Solved by: X-RAY, Resolution: 1.93A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

657-766 1w15A 19%
[Model]

1djz: PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH INOSITOL-4,5-BISPHOSPHATE
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-797 1djzA 18%
[Model]
665-797 1djzB 19%
[Model]

1byn: SOLUTION STRUCTURE OF THE CALCIUM-BOUND FIRST C2-DOMAIN OFSYNAPTOTAGMIN I
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-783 1bynA 18%
[Model]

1qas: 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE DELTA 1
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

665-797 1qasA 18%
[Model]
665-797 1qasB 18%
[Model]

1uov: CALCIUM BINDING DOMAIN C2B
Solved by: X-RAY, Resolution: 1.65A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

658-780 1uovA 18%
[Model]

2nq3: CRYSTAL STRUCTURE OF THE C2 DOMAIN OF HUMAN ITCHY HOMOLOG E3 UBIQUITIN PROTEIN LIGASE
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-794 2nq3A 18%
[Model]

1dsy: C2 DOMAIN FROM PROTEIN KINASE C (ALPHA) COMPLEXED WITH CA2AND PHOSPHATIDYLSERINE
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-783 1dsyA 18%
[Model]

2k45: C2A DOMAIN OF SYNAPTOTOTAGMIN I SOLUTION STRUCTURE IN THE FGF-1-C2A BINARY COMPLEX: KEY COMPONENT IN THE FIBROBLASTGROWTHFACTOR NON-CLASSICAL PATHWAY
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-783 2k45A 18%
[Model]

1uow: CALCIUM BINDING DOMAIN C2B
Solved by: X-RAY, Resolution: 1.18A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

659-765 1uowA 18%
[Model]

2ki6: THE FGF1-S100A13-C2A HETERO-HEXAMERIC COMPLEX STRUCTURE: AIN THE NON-CLASSICAL PATHWAY FOR FGF1 SECRETION
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-783 2ki6F 18%
[Model]
655-783 2ki6A 18%
[Model]

2enp: SOLUTION STRUCTURE OF THE FIRST C2 DOMAIN FROM HUMAN B/K PROTEIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

658-787 2enpA 18%
[Model]

3twy: RAT PKC C2 DOMAIN BOUND TO PB
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-783 3twyA 18%
[Model]

2r83: CRYSTAL STRUCTURE ANALYSIS OF HUMAN SYNAPTOTAGMIN 1 C2A-C2
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

662-766 2r83A 18%
[Model]
662-766 2r83B 18%
[Model]
659-781 2r83A 19%
[Model]
659-781 2r83B 19%
[Model]

2k8m: S100A13-C2A BINARY COMPLEX STRUCTURE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-783 2k8mA 18%
[Model]
655-783 2k8mD 18%
[Model]

1tjx: CRYSTALLOGRAPHIC IDENTIFICATION OF CA2+ COORDINATION SITESIN SYNAPTOTAGMIN I C2B DOMAIN
Solved by: X-RAY, Resolution: 1.18A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

659-765 1tjxA 18%
[Model]

3gpe: CRYSTAL STRUCTURE ANALYSIS OF PKC (ALPHA)-C2 DOMAIN COMPLEXED WITH CA2+ AND PTDINS(4,5)P2
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-783 3gpeA 18%
[Model]

2k4a: FGF-1-C2A BINARY COMPLEX STRUCTURE: A KEY COMPONENT IN THEFIBROBLAST GROWTHFACTOR NON-CLASSICAL PATHWAY
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-783 2k4aA 18%
[Model]

1qat: 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE DELTA COMPLEX WITH SAMARIUM (III) CHLORIDE
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-797 1qatA 18%
[Model]
664-797 1qatB 18%
[Model]

3fdw: CRYSTAL STRUCTURE OF A C2 DOMAIN FROM HUMAN SYNAPTOTAGMIN-LIKE PROTEIN 4
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

656-779 3fdwA 18%
[Model]
656-779 3fdwB 18%
[Model]

1tjm: CRYSTALLOGRAPHIC IDENTIFICATION OF SR2+ COORDINATION SITE IN SYNAPTOTAGMIN I C2B DOMAIN
Solved by: X-RAY, Resolution: 1.18A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

659-765 1tjmA 18%
[Model]

1rsy: STRUCTURE OF THE FIRST C2-DOMAIN OF SYNAPTOTAGMIN I: A NOVEL CA2+(SLASH)PHOSPHOLIPID BINDING FOLD
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

657-780 1rsyA 18%
[Model]

3rdj: RAT PKC C2 DOMAIN APO
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-783 3rdjA 18%
[Model]

2lha: SOLUTION STRUCTURE OF C2B WITH IP6
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

658-785 2lhaA 17%
[Model]

2q3x: THE RIM1ALPHA C2B DOMAIN
Solved by: X-RAY, Resolution: 1.73A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

662-780 2q3xA 20%
[Model]
660-780 2q3xB 17%
[Model]

3f00: CRYSTAL STRUCTURE OF SYNAPTOTAGMIN I C2A DOMAIN WITH CU(II
Solved by: X-RAY, Resolution: 1.36A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

658-779 3f00A 17%
[Model]

1k5w: THREE-DIMENSIONAL STRUCTURE OF THE SYNAPTOTAGMIN 1 C2B- DOMAIN: SYNAPTOTAGMIN 1 AS A PHOSPHOLIPID BINDING MACHINE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

656-780 1k5wA 17%
[Model]

2k3h: STRUCTURAL DETERMINANTS FOR CA2+ AND PIP2 BINDING BY THE CDOMAIN OF RABPHILIN-3A
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

656-779 2k3hA 17%
[Model]

4dnl: CRYSTAL STRUCTURE OF A C2 DOMAIN OF A PROTEIN KINASE C ALPFROM HOMO SAPIENS AT 1.90 A RESOLUTION
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

656-783 4dnlA 17%
[Model]

3f01: CRYSTAL STRUCTURE OF SYNAPTOTAGMIN I C2A DOMAIN WITH CU(II
Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

656-780 3f01A 17%
[Model]

3hn8: CRYSTAL STRUCTURE OF SYNAPTOTAGMIN
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

662-765 3hn8A 16%
[Model]
657-765 3hn8A 17%
[Model]
662-765 3hn8B 16%
[Model]
657-765 3hn8B 17%
[Model]
662-765 3hn8C 16%
[Model]
657-765 3hn8C 17%
[Model]

2b3r: CRYSTAL STRUCTURE OF THE C2 DOMAIN OF CLASS II PHOSPHATIDYLINOSITIDE 3-KINASE C2
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

661-779 2b3rA 17%
[Model]
661-779 2b3rB 17%
[Model]

1dqv: CRYSTAL STRUCTURE OF SYNAPTOTAGMIN III C2A/C2B
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

663-765 1dqvA 15%
[Model]
658-781 1dqvA 17%
[Model]

3f05: CRYSTAL STRUCTURE OF SYNAPTOTAGMIN I C2A DOMAIN WITH MN(II
Solved by: X-RAY, Resolution: 1.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

659-780 3f05A 17%
[Model]

2chd: CRYSTAL STRUCTURE OF THE C2A DOMAIN OF RABPHILIN-3A
Solved by: X-RAY, Resolution: 1.92A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-779 2chdA 17%
[Model]

1wfj: C2 DOMAIN-CONTAINING PROTEIN FROM PUTATIVE ELICITOR- RESPONSIVE GENE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-796 1wfjA 17%
[Model]

3f04: CRYSTAL STRUCTURE OF SYNAPTOTAGMIN I C2A DOMAIN
Solved by: X-RAY, Resolution: 1.35A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-779 3f04A 17%
[Model]

3qr0: CRYSTAL STRUCTURE OF S. OFFICINALIS PLC21
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-799 3qr0A 17%
[Model]

1w16: RAT SYNAPTOTAGMIN 4 C2B DOMAIN IN THE ABSENCE OF CALCIUM
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

657-765 1w16A 17%
[Model]

2fju: ACTIVATED RAC1 BOUND TO ITS EFFECTOR PHOSPHOLIPASE C BETA
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-797 2fjuB 16%
[Model]

3kwu: MUNC13-1 C2B-DOMAIN, CALCIUM BOUND
Solved by: X-RAY, Resolution: 1.37A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

660-796 3kwuA 16%
[Model]

2zkm: CRYSTAL STRUCTURE OF PHOSPHOLIPASE C BETA 2
Solved by: X-RAY, Resolution: 1.62A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

663-797 2zkmX 16%
[Model]

2dmh: SOLUTION STRUCTURE OF THE FIRST C2 DOMAIN OF HUMAN MYOFERL
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

661-799 2dmhA 16%
[Model]

2cjt: STRUCTURAL BASIS FOR A MUNC13-1 HOMODIMER- MUNC13-1- RIM HETERODIMER SWITCH: C2-DOMAINS AS VERSATILE PROTEIN- PROTEIN INTERACTION MODULES
Solved by: X-RAY, Resolution: 1.44A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

665-795 2cjtA 16%
[Model]
664-794 2cjtC 16%
[Model]
665-795 2cjtB 16%
[Model]
664-794 2cjtD 16%
[Model]

3l9b: CRYSTAL STRUCTURE OF RAT OTOFERLIN C2A
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

666-798 3l9bA 16%
[Model]

2cjs: STRUCTURAL BASIS FOR A MUNC13-1 HOMODIMER- MUNC13-1- RIM HETERODIMER SWITCH: C2-DOMAINS AS VERSATILE PROTEIN- PROTEIN INTERACTION MODULES
Solved by: X-RAY, Resolution: 1.78A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

665-800 2cjsB 15%
[Model]
665-800 2cjsA 15%
[Model]

3qr1: CRYSTAL STRUCTURE OF L. PEALEI PLC21
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

662-800 3qr1A 15%
[Model]
663-799 3qr1D 15%
[Model]

2d8k: SOLUTION STRUCTURE OF THE FIRST C2 DOMAIN OF SYNAPTOTAGMINVII
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-780 2d8kA 15%
[Model]

1a25: C2 DOMAIN FROM PROTEIN KINASE C (BETA)
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

659-783 1a25A 15%
[Model]
659-783 1a25B 15%
[Model]

2yrb: SOLUTION STRUCTURE OF THE FIRST C2 DOMAIN FROM HUMAN KIAA1005 PROTEIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

660-801 2yrbA 15%
[Model]

2fk9: HUMAN PROTEIN KINASE C, ETA
Solved by: X-RAY, Resolution: 1.75A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-795 2fk9A 15%
[Model]

2uzp: CRYSTAL STRUCTURE OF THE C2 DOMAIN OF HUMAN PROTEIN KINASEC GAMMA.
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

663-783 2uzpA 15%
[Model]
663-783 2uzpB 15%
[Model]
663-783 2uzpC 15%
[Model]

3ohm: CRYSTAL STRUCTURE OF ACTIVATED G ALPHA Q BOUND TO ITS EFFEPHOSPHOLIPASE C BETA 3
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-801 3ohmB 14%
[Model]

2cm5: CRYSTAL STRUCTURE OF THE C2B DOMAIN OF RABPHILIN
Solved by: X-RAY, Resolution: 1.28A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

656-766 2cm5A 14%
[Model]

1gmi: STRUCTURE OF THE C2 DOMAIN FROM NOVEL PROTEIN KINASE C EPSILON
Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

663-795 1gmiA 14%
[Model]

2cm6: CRYSTAL STRUCTURE OF THE C2B DOMAIN OF RABPHILIN3A
Solved by: X-RAY, Resolution: 1.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

657-780 2cm6A 14%
[Model]
657-780 2cm6B 13%
[Model]

1v27: SOLUTION STRUCTURE OF THE FIRST C2 DOMAIN OF RIM2
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

655-780 1v27A 13%
[Model]

3jzy: CRYSTAL STRUCTURE OF HUMAN INTERSECTIN 2 RHOGEF DOMAIN
Solved by: X-RAY, Resolution: 1.56A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

665-795 3jzyA 13%
[Model]

3rpb: THE C2B-DOMAIN OF RABPHILIN: STRUCTURAL VARIATIONS IN A JANUS-FACED DOMAIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

657-780 3rpbA 13%
[Model]

2z0u: CRYSTAL STRUCTURE OF C2 DOMAIN OF KIBRA PROTEIN
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

657-779 2z0uA 12%
[Model]
657-779 2z0uB 12%
[Model]

1bci: C2 DOMAIN OF CYTOSOLIC PHOSPHOLIPASE A2, NMR, MINIMIZED AVERAGE STRUCTURE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

663-795 1bciA 12%
[Model]

1rh8: THREE-DIMENSIONAL STRUCTURE OF THE CALCIUM-FREE PICCOLO C2DOMAIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

662-780 1rh8A 12%
[Model]

3n5a: SYNAPTOTAGMIN-7, C2B-DOMAIN, CALCIUM BOUND
Solved by: X-RAY, Resolution: 1.44A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

660-780 3n5aA 12%
[Model]

1rlw: CALCIUM-PHOSPHOLIPID BINDING DOMAIN FROM CYTOSOLIC PHOSPHOLIPASE A2
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

662-797 1rlwA 12%
[Model]

2jqz: SOLUTION STRUCTURE OF THE C2 DOMAIN OF HUMAN SMURF2
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

663-797 2jqzA 12%
[Model]

2ep6: SOLUTION STRUCTURE OF THE SECOND C2 DOMAIN FROM HUMAN MCTPPROTEIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-795 2ep6A 11%
[Model]

3nsj: THE X-RAY CRYSTAL STRUCTURE OF LYMPHOCYTE PERFORIN
Solved by: X-RAY, Resolution: 2.75A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

665-796 3nsjA 11%
[Model]

2bwq: CRYSTAL STRUCTURE OF THE RIM2 C2A-DOMAIN AT 1.4 ANGSTROM RESOLUTION
Solved by: X-RAY, Resolution: 1.41A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

657-770 2bwqA 11%
[Model]

3pyc: CRYSTAL STRUCTURE OF HUMAN SMURF1 C2 DOMAIN
Solved by: X-RAY, Resolution: 1.96A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

664-796 3pycA 10%
[Model]

1wfm: THE FIRST C2 DOMAIN OF HUMAN SYNAPTOTAGMIN XIII
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

660-783 1wfmA 10%
[Model]

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.