SWISS-MODEL Repository

[ Repository Query ] [ Full Text Query ]

SWISS-MODEL Repository - Model Details

Model Overview

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444

Sequence

UniProt

Q9XGM8

Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING

Q9XGM8: 3702.AT4G38240.2

Domain

Link to: [ InterPro ]

GNT-I

Model 3D Structure

	Model information:
	Modelled residue range:	105 to 435
	Based on template:	[ 2apc ]
	Sequence Identity [%]:	39%
	Model date:	2013-05-05
	Revision date:	2013-04-01

Quaternary structure information:	[details]
Template (2apc): MONOMER Model built: SINGLE CHAIN

Ligand information:	[details]
Ligands in the template: GOL: 6, MN: 1, UDM: 1. Ligands in the model: none.

Template Links: [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment


TARGET    1        VAAVVVM ACSRADYLER TVKSVLTYQT PVASKYPLFI SQDGSDQAVK
2apcA     106   a--vipilvi acdrst-vrr cldkllhyr- psaelfpiiv sqdcgheeta
                                                                      
TARGET              ssssss s       hh hhhhhhhh       ssssss sss   hhhh
2apcA               ssssss s    h hhh hhhhhhhh       ssssss sss   hhhh


TARGET    48    SKSLSYNQ-L TYMQHLDFEP VVTERPG-EL TAYYKIARHY KWALDQLFYK
2apcA     152   qviasygsav thirqpdlsn iavqpdhrkf qgyykiarhy rwalgqifhn
                                                                      
TARGET          hhhh       sssss                 hhhhhhhhhh hhhhhhhhhh
2apcA           hhhhh      sssss                  hhhhhhhhh hhhhhhhhhh


TARGET    96    HKFSRVIILE DDMEIAPDFF DYFEAAASLM DRDKTIMAAS SWNDNGQKQF
2apcA     202   fnypaavvve ddlevapdff eyfqatypll kadpslwcvs awndngkeqm
                                                                      
TARGET             sssssss ssssss  hh hhhhhhhhhh hh      ss s         
2apcA              sssssss ssssss  hh hhhhhhhhhh hh      ss s         


TARGET    146   VH--DPYALY RSDFFPGLGW MLKRSTWDEL SPKWPKAYWD DWLRLKENHK
2apcA     252   vdsskpelly rtdffpglgw lllaelwael epkwpkafwd dwmrrpeqrk
                                                                      
TARGET                 sss ss      ss sssshhhhhh h       hh hhh   hhh 
2apcA                  sss ss      ss sssshhhhhh h       hh hhh   hhh 


TARGET    194   GRQFIRPEVC RTYNFGEHGS SLGQFFSQYL EPIKLNDVTV DWKAKDLGYL
2apcA     302   gracvrpeis rtmtfgrkgv shgqffdqhl kfiklnqqfv pftqldlsyl
                                                                      
TARGET             sssss   sssss         hhhhh                        
2apcA              sssss   sssss         hhhhh                        


TARGET    244   TEGNYTKYFS GLVRQARPIQ GSDLVLKAQN IKDDVRIRYK DQVEFERIAG
2apcA     352   qqeaydrdfl arvygapqlq vekvrtndrk elgevrvqyt grdsfkafak
                                                                      
TARGET           hhhhhhhhh hhhhh       hhhhh       sssssss   hhhhhhhhh
2apcA            hhhhhhhhh hhhhh      hhhhhh       sssssss   hhhhhhhhh


TARGET    294   EFGIFEEWKD GVPRTAYKGV VVFRIQTTRR VFLVGPDS - -------   
2apcA     402   algvmddlks gvpragyrgi vtflfr-grr vhlappqtwd gydpswt   
                                                                      
TARGET          hh                    sss      s ssss                 
2apcA           hh                    sssss   ss ssss

Quality

[ start new quality assessment in Workspace ]

Ligand Modelling Log

Template's ligands section 
Ligands in the template: GOL: 6, MN: 1, UDM: 1. 
Ligands in the template that will be assessed: MN448. 
Model's ligands section 
MN448 
The ligand binds less than 3 template residues. 
Given the properties calculated previously, the ligand MN448 will not be included in the final model. 
MN448: conservation:False, RMSD:False, included: False 
 
No ligands were included in the model.

Oligomer Modelling Log

Quaternary Structure Annotation of the Template 
 2apc is annotated as MONOMER 
 The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry 
 The following biological unit was used to build the template structure: 2apc.pdb1.gz 
      
 
Quaternary Structure Modelling of the Target Protein 
 Analysis of evolutionary and family specific aspects revealed non-conservation of the oligomeric structure 
 Hence, the oligomeric structures of the target and the template cannot be assumed to be similar (=MONOMER) 
 The target structure was calculated as SINGLE CHAIN 
 The corresponding reliability score is 0.21 (>0.5 indicates similarity)

Template Selection

 - Start SMR-Pipeline for:43e1c0eb5093fa85deb5297cf399f456 on BC2-cluster at Sun May  5 18:03:12
2013 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with P found
 - No template with D found
 - No template with D found
 - No template with A found
 - No template with C found
 - No template with B found
 - No template with C found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:1): model based on new templates
 - Send 1 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                    ************************************************************
 - building model based on 2apcA (105-435) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:43e1c0eb5093fa85deb5297cf399f456 on BC2-cluster at Sun May  5 18:13:27
2013

Template Search

[ start new template identification in Workspace ]

Template Description

Match

Chain

SeqId

2am4: CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINYLTRANSFERASE I IN COMPLEX WITH UDP-2-DEOXY-2-FLUORO-GLUCOSE
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

104-438

2am4A

39%

[Model]

2am5: CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINYLTRANSFERASE I IN COMPLEX WITH UDP
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

104-438

2am5A

39%

[Model]

1foa: CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINYLTRANSFERASE I
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

104-438

1foaA

39%

[Model]

2apc: CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINYLTRANSFERASE I IN COMPLEX WITH UDP-GLCNAC PHOSPHONATE
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

104-438

2apcA

39%

[Model]

2am3: CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINYLTRANSFERASE I IN COMPLEX WITH UDP-GLUCOSE
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

104-438

2am3A

39%

[Model]

1fo8: CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINYLTRANSFERASE I
Solved by: X-RAY, Resolution: 1.40A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

103-438

1fo8A

37%

[Model]

1fo9: CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINYLTRANSFERASE I
Solved by: X-RAY, Resolution: 1.50A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

102-438

1fo9A

37%

[Model]

2ffu: CRYSTAL STRUCTURE OF HUMAN PPGALNACT-2 COMPLEXED WITH UDP AND EA2
Solved by: X-RAY, Resolution: 1.64A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

100-312

2ffuA

14%

>target---------------------------------------------------------GGQMPVAAVVVMACSRA-DYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSY-NQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASS------------------------WNDNGQ-KQF--------VHDPYALYRSDFFPGLGWMLKRSTWDELSP------KWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->2ffuAKVRWPDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKK-SPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRND-------RRE-------GLMRSRVRGADAA----QAKVLTFLDSHCECNEHWLEPLLERV---AEDRTR-VVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRV-WQCGGSLEIIPC-SRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVYPELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGVYECHNAGGNQEWALTKEKSVKHMDLCLTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSRTAKSGGLSVEVCGPALSQQWKFTLN

[Model]

2ffv: HUMAN PPGALNACT-2 COMPLEXED WITH MANGANESE AND UDP
Solved by: X-RAY, Resolution: 2.75A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	101-313	2ffvA	13%	>target -----------------------------------------------------GQMPVAAVVVMACSRA-DYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSY-NQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAAS-----------------------SWNDNGQ-KQF--------VHDPYALYRSDFFPGLGWMLKRSTWDELSP------KWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >2ffvA DALKVRWPDFNQEAYVGGPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKK-SPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRND-------RRE----G-LMRSRVRGADAA------QAKVLTFLDSHCECNEHWLEPLLERVA---EDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRV-WQCGGSLEIIPC-SRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVYPELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGVYECHNGNQEWALTKEKSVKHMDLCLTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSRTAKSGGLSVEVCGPALSQQWKFTLNLQ [Model]
	96-312	2ffvB	14%	>target ----------------------------------------KLTQGGQMPVAAVVVMACSRA-DYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSY-NQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASS------------------------WNDNGQK-QF--------VHDPYALYRSDFFPGLGWMLKRSTWDELSP------KWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >2ffvB LKVRWPDFNQEAYVGGFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKK-SPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRND-------RRE----GL-MRSRVRGADAA------QAKVLTFLDSHCECNEHWLEPLLERVA---EDRTR-VVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRV-WQCGGSLEIIPC-SRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVYPELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGVYECHNGNQEWALTKEKSVKHMDLCLTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSRTAKSGGLSVEVCGPALSQQWKFTLNLQ [Model]

2z86: CRYSTAL STRUCTURE OF CHONDROITIN POLYMERASE FROM ESCHERICHIA COLI STRAIN K4 (K4CP) COMPLEXED WITH UDP-GLCUAND UDP
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

101-292	2z86A	13%	>target -------------------------------------------------------------------------------GQMPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQ---LTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSW-----NDNGQKQFVHDPY--------ALYRS----------------DFFPGLGWMLKRSTWDELS------PKWPKAYWDDWLRL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >2z86A IDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELLIIDGLSIVIPTYNRAKILAITLACLCNQKTIY--DYEVIVADDGSKENIEEIVREFESLLNIKYVRQKD--------Y-----GYQLCAVRNLGLRAA----KYNYVAILDCDMAPNPLWVQSYM---ELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPESVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]
103-319	2z86B	14%	>target ------------------------------------------------------------------------------------MPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQ---LTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSWN--DNGQ---KQFVHDPY--------------------ALYR----------SDFFPGLGWMLKRSTWDELS------PKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >2z86B KAVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIY--DYEVIVADDGSKENIEEIVREFESLLNIKYVRQKD--------YG-----YQLCAVRNLGLR----AAKYNYVAILDCDMAPNPLWVQSYM---ELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRL--YREGCYFRSVEGAMAYHQEPPGKENENITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHGNTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]
102-307	2z86A	13%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QMPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYN-QLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSW----NDNGQKQF--VH----DPYALYRSDFFPGLGWMLKRSTWDELSP---KWPKA-YWDDWLRLKENHKGRQFIRPEVC----------------------------------------------------- >2z86A IDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPESVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQ-TI--TDLEVCICDDGSTDDTLRILQEHYANHPRVRF-----ISQKNK-------GIGS----ASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLD---EFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTS-AMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLS--EVGPFKHINKICYNRVLHSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]
102-313	2z86B	13%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QMPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSW----NDNGQK--QFVH----DPYALYRSDFFPGLGWMLKRSTWDELSPKWPKA-----YWDDWLRLKENHKGRQFIRPEVCRTYNFG-------------------------------------------------- >2z86B KAVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKENENITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQ-TIT--DLEVCICDDGSTDDTLRILQEHYA----NHPRVRFISQKN-------KGIGS----ASNTAVRLCRGFYIGQLDSDDFLEPDAVELCL---DEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTS-AMICHHFRMFTARAWNLTEG-FNESISNAVDYDMYLKL--SEVGPFKHINKICYNRVLHGNTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]
99-313	2z86C	13%	>target ----------------------------------------------------------------------------------QGGQMPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQ---LTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASS--WNDNGQK---QFVHDP---------------YALYR----------------SDFFPGLGWMLKRSTWDELSP------KWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >2z86C AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDDQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIY--DYEVIVADDGSKENIEEIVREFESLLNIKYVRQ--------KDYG-----YQLCA----VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYME---LLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRL--YREGCYFRSVEGAMAYHQEPPGKENITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]
101-308	2z86C	14%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQMPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSWN----DNGQKQF--VHDP---YALYRSDFFPGLGWMLKRSTWDELSP---KWPKA-YWDDWLRLKENHKGRQFIRPEVCR-------------------------------------------------------- >2z86C AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDDQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKENITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQ-TIT--DLEVCICDDGSTDDTLRILQEHYA----NHPRVRFISQKN-------KGIGS----ASNTAVRLCRGFYIGQLDSDDFLEPDAVELC---LDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLS--EVGPFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]
104-240	2z86D	16%	>target -----------------------------------------------------------------------------------PVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQ---LTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >2z86D AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELIIDGLSIVIPTYNRAKILAITLACLCNQKTIY--DYEVIVADDGSKENIEEIVREFESLLNIKYVRQK--------DYG-----YQLCAVRNLGLR----AAKYNYVAILDCDMAPNPLWVQSYME---LLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGTVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]
101-323	2z86D	14%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQMPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSY-N---QLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSWN----DNGQKQFV--HDP---YALYRSDFFPGLGWMLKRSTWDELSP---KWPK-AYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFF---------------------------------- >2z86D AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGTVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTIT---DLEVCICDDGSTDDTLRILQEHYANHPRVRFIS--------QKN-------KGIGSA----SNTAVRLCRGFYIGQLDSDDFLEPDAVELCLD---EFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSE--VGPFKHINKIC--YNRVLHDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]

2z87: CRYSTAL STRUCTURE OF CHONDROITIN POLYMERASE FROM ESCHERICHIA COLI STRAIN K4 (K4CP) COMPLEXED WITH UDP- GALNAC AND UDP
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

103-312	2z87B	14%	>target ----------------------------------------------------------------------------------MPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQ---LTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASS--WNDNGQK---QFVHDPYA---------------LYR----------------SDFFPGLGWMLKRSTWDELS------PKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >2z87B AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIY--DYEVIVADDGSKENIEEIVREFESLLNIKYVRQKD--------YG-----YQLCA----VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYME---LLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRL--YREGCYFRSVEGAMAYHQEPPGKLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHNTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]
101-308	2z87B	13%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQMPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYN-QLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSW----NDNGQKQFV--H----DPYALYRSDFFPGLGWMLKRSTWDELSP---KWPK-AYWDDWLRLKENHKGRQFIRPEVCR------------------------------------------------------ >2z87B AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQ-TIT--DLEVCICDDGSTDDTLRILQEHYANHPRVRF-----ISQKN-------KGIGS----ASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLD---EFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLT-SAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLS--EVGPFKHINKICYNRVLHNTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]
102-310	2z87A	13%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QMPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYN-QLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSW----NDNGQKQF--V----HDPYALYRSDFFPGLGWMLKRSTWDELSP---KWPK-AYWDDWLRLKENHKGRQFIRPEVCRTY-------------------------------------------------- >2z87A AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKEQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPNITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQ-TI--TDLEVCICDDGSTDDTLRILQEHYANHPRVRF-----ISQKN-------KGIGSASNTAVR----LCRGFYIGQLDSDDFLEPDAVELCL---DEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTS-AMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLS--EVGPFKHINKICYNRVLHSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]
103-240	2z87A	17%	>target -----------------------------------------------------------------------------------MPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQ---LTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >2z87A AVIDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKEQLIIDGLSIVIPTYNRAKILAITLACLCNQKTI--YDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKD--------YG-----YQLCAVRNLGLRA----AKYNYVAILDCDMAPNPLWVQSYM---ELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPNITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI [Model]

1xhb: THE CRYSTAL STRUCTURE OF UDP-GALNAC: POLYPEPTIDE ALPHA-N- ACETYLGALACTOSAMINYLTRANSFERASE-T1
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

101-315

1xhbA

13%

[Model]

1h7l: DTDP-MAGNESIUM COMPLEX OF SPSA FROM BACILLUS SUBTILIS
Solved by: X-RAY, Resolution: 1.98A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

104-313

1h7lA

12%

1qgs: UDP-MAGNESIUM COMPLEX OF SPSA FROM BACILLUS SUBTILIS
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

104-308

1qgsA

12%

1qg8: NATIVE (MAGNESIUM-CONTAINING) SPSA FROM BACILLUS SUBTILIS
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

104-308

1qg8A

12%

4fix: CRYSTAL STRUCTURE OF GLFT2
Solved by: X-RAY, Resolution: 2.45A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	104-313	4fixB	12%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------PVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSD-----QAVKSKSLSY-NQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSWN---------------DNGQKQFV---------------H----DPYA-LYRSDFFPGLGW--MLKRSTWDELSPKWPKA---YWDDW---LRLKENHKG-RQFIRPEVCRTYNFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >4fixB MSELAASLLSRVILPRPGEPLDVRKLYLEESTTNARRAHAPTRTSLQIGAESEVSFATYFNAFPASYWRRWTTCKSVVLRVQVTGAGRVDVYRTKATGARIFVEGHDFTGTEDQPAAVETEVVLQPFEDGGWVWFDITTDTAVTLHSGGWYATSPAPGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQPNL--------GGS---GGYSRVMYEALK----NTDCQQILFMDDDIRLEPDSILRVLAMHRFA-KAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELG--QPLPLFIKWDDADYGLRA--AEHGYPTVTLPGAA-IWHMAWSDKDDAIDWQAYFHLRNRLVVAAMHWDGPKAQVIGLVRSHLKATLKHLACLEYSTVAIQNKAIDDFLAGPEHIFSILESALPQVHRIRKSYPDAVVLPAASELPPPLHKNKAMKPPVNPLVIGYRLARGIMHNLTAANPQHHRRPEFNVPTQDARWFLLCTVDGATVTTADGCGVVYRQRDRAKMFALLWQSLRRQRQLLKRFEEMRRIYRDALPTLSSKQKWETALLPA [Model]
	104-313	4fixA	12%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------PVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSD-----QAVKSKSLSY-NQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSWN---------------DNGQKQFV---------------H----DPYA-LYRSDFFPGLGW--MLKRSTWDELSPKWPKA---YWDDW---LRLKENHKG-RQFIRPEVCRTYNFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >4fixA MSELAASLLSRVILPRPGEPLDVRKLYLEESTTNARRAHAPTRTSLQIGAESEVSFATYFNAFPASYWRRWTTCKSVVLRVQVTGAGRVDVYRTKATGARIFVEGHDFTGTEDQPAAVETEVVLQPFEDGGWVWFDITTDTAVTLHSGGWYATSPAPGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQPNL--------GGS---GGYSRVMYEALK----NTDCQQILFMDDDIRLEPDSILRVLAMHRFA-KAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELG--QPLPLFIKWDDADYGLRA--AEHGYPTVTLPGAA-IWHMAWSDKDDAIDWQAYFHLRNRLVVAAMHWDGPKAQVIGLVRSHLKATLKHLACLEYSTVAIQNKAIDDFLAGPEHIFSILESALPQVHRIRKSYPDAVVLPAASELPPPLHKNKAMKPPVNPLVIGYRLARGIMHNLTAANPQHHRRPEFNVPTQDARWFLLCTVDGATVTTADGCGVVYRQRDRAKMFALLWQSLRRQRQLLKRFEEMRRIYRDALPTLSSKQKWETALLPA [Model]

1h7q: DTDP-MANGANESE COMPLEX OF SPSA FROM BACILLUS SUBTILIS
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

104-311

1h7qA

12%

4hg6: STRUCTURE OF A CELLULOSE SYNTHASE - CELLULOSE TRANSLOCATIOINTERMEDIATE
Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

94-327

4hg6A

12%

>target---------------------------------------------------------------------------------------------------------------------IAKLTQGGQMPVAAVVVMACSRA-DYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKS---------------KSLSY-N--QLTYMQHLDFEPVVTERPGELTAYYKIARHYKW-ALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSW----NDNGQKQFV-------HDPY----------ALYRSDFFPGLGWMLKRSTWDELSPKWPKA---YWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFSQYL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------>4hg6AVVPVLLFLLWVALLVPFGLLAAAPVAPSAQGLIALSAVVLVALLKPFADKMVPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPA-RLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTRER-------NE-----------HAKAGNMSAALERLKGELVVVFDADHVPSRDFLA---RTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAGETITEDAETALEI--HSRGWKSLYI--DRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNPLFRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSENYISPIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAPRVQMEVPAEAQIPAFGNRSLTATVLDASTSGVRLLVRLPGVGDPHPALEAGGLIQFQPKFPDAPQLERMVRGRIRSARREGGTVMVGVIFEAGQPIAVRETVAYLIFGESAHWRTMREATMRPIGLLHGMARILWMAAASLPKTARDFMDEPARRRRRHEEPKEKQAHLLAFGTDF

[Model]

2d7r: CRYSTAL STRUCTURE OF PP-GALNAC-T10 COMPLEXED WITH GALNAC- SER ON LECTIN DOMAIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

100-313

2d7rA

12%

>target-------------------------------------------------------------------------GGQMPVAAVVVMACSRA-DYLERTVKSVLTYQTPVASKYPLFISQDGSDQAV-KSKSLSYN----QLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAAS---SWNDNGQ---------------------------KQFVHDPYALYRSDFFPGLGWMLKRSTWDELSP------KWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->2d7rAGQKLKDWHDKEAIRRDAQRVGNGEQGRPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNR-SPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTK-------KR-------EGLIRTRMLGASVA----TGDVITFLDSHCEANVNWLPPLLDRI---ARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKV-WMCGGRMEDIPC-SRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWLFEHTNSTVLEKFNRN

[Model]

2d7i: CRSYTAL STRUCTURE OF PP-GALNAC-T10 WITH UDP, GALNAC AND MN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

100-313

2d7iA

12%

>target-------------------------------------------------------------------------GGQMPVAAVVVMACSRA-DYLERTVKSVLTYQTPVASKYPLFISQDGSDQAV-KSKSLSYN----QLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAAS---SWNDNGQ---------------------------KQFVHDPYALYRSDFFPGLGWMLKRSTWDELSP------KWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->2d7iAGQKLKDWHDKEAIRRDAQRVGNGEQGRPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNR-SPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTK-------KR-------EGLIRTRMLGASVA----TGDVITFLDSHCEANVNWLPPLLDRI---ARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKV-WMCGGRMEDIPC-SRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWLFEHTNSTVLEKFNRN

[Model]

1qgq: UDP-MANGANESE COMPLEX OF SPSA FROM BACILLUS SUBTILIS
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

104-308

1qgqA

12%

4fiy: CRYSTAL STRUCTURE OF GLFT2 COMPLEXED WITH UDP
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	104-320	4fiyB	11%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------PVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSD-----QAVKSKSLSY-NQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSWNDNG---------------QKQFV---------------H----DPYA-LYRSDFFPGLGW--MLKRSTWDELSPKWPKAY---WDDW---LRLKENHKG-RQFIRPEVCRTYNFG--EHGSSLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >4fiyB MSELAASLLSRVILPRPGEPLDVRKLYLEESTTNARRAHAPTRTSLQIGAESEVSFATYFNAFPASYWRRWTTCKSVVLRVQVTGAGRVDVYRTKATGARIFVEGHDFTGTEDQPAAVETEVVLQPFEDGGWVWFDITTDTAVTLHSGGWYATSPAPGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQPNLGG--------S---GGYSRVMYEALK----NTDCQQILFMDDDIRLEPDSILRVLAMHRFA-KAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELG--QPLPLFIKWDDADYGLRA--AEHGYPTVTLPGAA-IWHMAWSDKDDAIDWQAYFHLRNRLVVAAMHWDGPKAQVIGLVRSHLKATLKHLACLEYSTVAIQNKAIDDFLAGPEHIFSILESALPQVHRIRKSYPDAVVLPAASELPPPLHKNKAMKPPVNPLVIGYRLARGIMHNLTAANPQHHRRPEFNVPTQDARWFLLCTVDGATVTTADGCGVVYRQRDRAKMFALLWQSLRRQRQLLKRFEEMRRIYRDALPTLSSKQKWETALLP [Model]
	104-320	4fiyA	11%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------PVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSD-----QAVKSKSLSY-NQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSWNDNG---------------QKQFV---------------H----DPYA-LYRSDFFPGLGW--MLKRSTWDELSPKWPKAY---WDDW---LRLKENHKG-RQFIRPEVCRTYNFG--EHGSSLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >4fiyA MSELAASLLSRVILPRPGEPLDVRKLYLEESTTNARRAHAPTRTSLQIGAESEVSFATYFNAFPASYWRRWTTCKSVVLRVQVTGAGRVDVYRTKATGARIFVEGHDFTGTEDQPAAVETEVVLQPFEDGGWVWFDITTDTAVTLHSGGWYATSPAPGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQPNLGG--------S---GGYSRVMYEALK----NTDCQQILFMDDDIRLEPDSILRVLAMHRFA-KAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELG--QPLPLFIKWDDADYGLRA--AEHGYPTVTLPGAA-IWHMAWSDKDDAIDWQAYFHLRNRLVVAAMHWDGPKAQVIGLVRSHLKATLKHLACLEYSTVAIQNKAIDDFLAGPEHIFSILESALPQVHRIRKSYPDAVVLPAASELPPPLHKNKAMKPPVNPLVIGYRLARGIMHNLTAANPQHHRRPEFNVPTQDARWFLLCTVDGATVTTADGCGVVYRQRDRAKMFALLWQSLRRQRQLLKRFEEMRRIYRDALPTLSSKQKWETALLP [Model]

3bcv: CRYSTAL STRUCTURE OF A PUTATIVE GLYCOSYLTRANSFERASE FROM BACTEROIDES FRAGILIS
Solved by: X-RAY, Resolution: 2.35A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	103-304	3bcvB	10%	>target -MPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAAS-SWND-NGQKQF-----VHDP-YALYRSDFFPGLGWMLKRSTWDELSPKWP------KAYWDDWLRLKENHKGRQFIRP >3bcvB LIPKVSVIVPIYNVEKYLDQCVQALLAQTLS---DIEIILIDDESPDNCPKICDDYAA----QYPNIKVIHKKN-------AGLGM----ACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQ--KYTCDAVFTFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDV-LANSNIVCVLP [Model]
	103-304	3bcvA	10%	>target -MPVAAVVVMACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQLTYMQHLDFEPVVTERPGELTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAAS-SWND-NGQKQF-----VHDP-YALYRSDFFPGLGWMLKRSTWDELSPKWP------KAYWDDWLRLKENHKGRQFIRP >3bcvA LIPKVSVIVPIYNVEKYLDQCVQALLAQTLS---DIEIILIDDESPDNCPKICDDYAA----QYPNIKVIHKKN-------AGLGM----ACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQ--KYTCDAVFTFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDV-LANSNIVCVLP [Model]

Downloads

download model.tgz

Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.