SWISS-MODEL Repository - Model Details

Model Overview
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1
1673

Sequence
UniProt Q9Y6Y1
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING
Q9Y6Y1: 9606.ENSP0000030

Domain
Link to: [ InterPro ]
IQ
IQ
TIG
CG-1

Model 3D Structure
Model information:
Modelled residue range: 872 to 954
Based on template: [ 2cxk ]  
Sequence Identity [%]: 98%
Model date: 2013-04-23
Revision date: 2013-04-01

Quaternary structure information: [details]
Template (2cxk): DIMER
Model: DIMER

Ligand information: [details]
Ligands in the template: SO4: 4.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment 

TARGET    1        MVTDYSP EWSYPEGGVK VLITGPWQEA SNNYSCLFDQ ISVPASLIQP
2cxk_2#8  871   g--xvtdysp ewsypeggvk vlitgpwqea snnysclfdq isvpasliqp
                                                                      
TARGET                sss  sss     ss sssss        sssssss  ssssssss  
2cxk_2#8              sss  sss     ss sssss        sssssss  ssssssss  


TARGET    48    GVLRCYCPAH DTGLVTLQVA FNNQIISNSV VFEYKA ---  MVTDYSPEW
2cxk_2#8  919   gvlrcycpah dtglvtlqva fnnqiisnsv vfeyks-gg- -xvtdyspew
                                                          *           
TARGET          sssssss      ssssssss ss sss   s sssss          sss ss
2cxk_2#8        sssssss      ssssssss ss sss   s sssss          sss ss


TARGET    93    SYPEGGVKVL ITGPWQEASN NYSCLFDQIS VPASLIQPGV LRCYCPAHDT
2cxk_2#8  881   sypeggvkvl itgpwqeasn nysclfdqis vpasliqpgv lrcycpahdt
                                                                      
TARGET          s     ssss sss        sssssss ss ssssss  ss sssss     
2cxk_2#8        s     ssss sss        sssssss ss ssssss  ss sssss     


TARGET    143   GLVTLQVAFN NQIISNSVVF EYKA                            
2cxk_2#8  931   glvtlqvafn nqiisnsvvf eyks-                           
                                                                      
TARGET          ssssssssss  sss   sss sss                             
2cxk_2#8        ssssssssss  sss   sss sss

Quality 


Template's ligands section 
Ligands in the template: SO4: 4. 
The template contains ligands that are not yet part of the pipeline. Ligands which are currently assessed are listed in the help page. 
No ligands were included in the model.

 
Quaternary Structure Annotation of the Template 
 2cxk is annotated as DIMER 
 The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry 
 The following biological unit was used to build the template structure: 2cxk.pdb2.gz 
      
 
Quaternary Structure Modelling of the Target Protein 
 The quaternary structure can be assumed to be identical 
 To build the complex the following chains of the complex has been additionally identified: 2cxkD  
 Model was succesfully built as DIMER.

Template Selection 
 - Start SMR-Pipeline for:d1be0c1c2e214ae12a69b213462624e2 on BC2-cluster at Tue Apr 23 02:08:00
2013 


 - Analyze BLAST summary ... 
 - Blast template search was successfull, number of templates selected for modeling:  1
 - But still uncovered regions of the target sequence detected, go for: HHSEARCH

 - No A3m found

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modfied template library 
 - Summarize templates: 
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 - No template with B found
 - No template with C found
 - Warning: Oligomer Prediction was not successfull!

 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:2): model based on new templates
 - Send 2 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                                           ****
 - building model based on 2cxkC (872-954) was successful 
 -                                                    *****
 - building model based on 2v5qD (1065-1163) was not successful go to next best template
 -                                                    *****
 - building model based on 2v5qC (1065-1163) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:d1be0c1c2e214ae12a69b213462624e2 on BC2-cluster at Tue Apr 23 02:11:50
2013


Template Description
Match Chain SeqId

2cxk: CRYSTAL STRUCTURE OF THE TIG DOMAIN OF HUMAN CALMODULIN- BINDING TRANSCRIPTION ACTIVATOR 1 (CAMTA1)
Solved by: X-RAY, Resolution: 1.85A, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

872-954 2cxkB 99%
[Model]
872-954 2cxkA 99%
[Model]
872-954 2cxkC 99%
[Model]
872-954 2cxkD 99%
[Model]
872-954 2cxkE 99%
[Model]

2v5q: CRYSTAL STRUCTURE OF WILD-TYPE PLK-1 KINASE DOMAIN IN COMPLEX WITH A SELECTIVE DARPIN
Solved by: X-RAY, Resolution: 2.3A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1132 2v5qD 31%
[Model]
1059-1164 2v5qD 29%
[Model]
1065-1163 2v5qD 29%
[Model]
1110-1164 2v5qD 24%
[Model]
1059-1132 2v5qC 30%
[Model]
1059-1164 2v5qC 29%
[Model]
1064-1164 2v5qC 29%
[Model]
1109-1164 2v5qC 23%
[Model]

2p2c: INHIBITION OF CASPASE-2 BY A DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN)
Solved by: X-RAY, Resolution: 3.24A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 2p2cP 25%
[Model]
1059-1133 2p2cQ 25%
[Model]
1059-1163 2p2cP 30%
[Model]
1059-1166 2p2cQ 30%
[Model]
1061-1162 2p2cQ 29%
[Model]
1062-1164 2p2cP 26%
[Model]
1067-1163 2p2cQ 28%
[Model]
1060-1163 2p2cP 30%
[Model]
1106-1163 2p2cP 24%
[Model]
1111-1163 2p2cQ 26%
[Model]
1059-1129 2p2cS 24%
[Model]
1059-1129 2p2cR 25%
[Model]
1059-1161 2p2cR 29%
[Model]
1059-1161 2p2cS 29%
[Model]
1059-1164 2p2cS 29%
[Model]
1061-1163 2p2cR 30%
[Model]
1067-1163 2p2cS 28%
[Model]
1062-1163 2p2cR 26%
[Model]
1109-1164 2p2cR 25%
[Model]
1111-1164 2p2cS 26%
[Model]
1059-1129 2p2cU 24%
[Model]
1059-1129 2p2cT 24%
[Model]
1059-1163 2p2cT 30%
[Model]
1059-1163 2p2cU 30%
[Model]
1061-1161 2p2cT 30%
[Model]
1059-1163 2p2cU 30%
[Model]
1067-1164 2p2cT 28%
[Model]
1067-1163 2p2cU 28%
[Model]
1112-1164 2p2cT 26%
[Model]
1111-1163 2p2cU 26%
[Model]

4atz: AD5 KNOB IN COMPLEX WITH A DESIGNED ANKYRIN REPEAT PROTEIN
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 4atzF 24%
[Model]
1059-1129 4atzD 24%
[Model]
1059-1129 4atzE 24%
[Model]
1058-1163 4atzD 29%
[Model]
1058-1163 4atzE 29%
[Model]
1059-1163 4atzF 30%
[Model]
1059-1163 4atzD 31%
[Model]
1059-1163 4atzE 31%
[Model]
1060-1163 4atzF 32%
[Model]
1067-1163 4atzF 30%
[Model]
1065-1163 4atzD 29%
[Model]
1065-1163 4atzE 29%
[Model]
1112-1163 4atzF 27%
[Model]
1110-1163 4atzD 26%
[Model]
1110-1163 4atzE 26%
[Model]

2bkg: CRYSTAL STRUCTURE OF E3_19 AN DESIGNED ANKYRIN REPEAT PROTEIN
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 2bkgA 23%
[Model]
1059-1162 2bkgA 30%
[Model]
1060-1163 2bkgA 30%
[Model]
1066-1163 2bkgA 29%
[Model]
1111-1163 2bkgA 25%
[Model]
1059-1129 2bkgB 23%
[Model]
1059-1162 2bkgB 30%
[Model]
1060-1163 2bkgB 30%
[Model]
1066-1163 2bkgB 29%
[Model]
1111-1163 2bkgB 25%
[Model]

3zu7: CRYSTAL STRUCTURE OF A DESIGNED SELECTED ANKYRIN REPEAT PROTEIN IN COMPLEX WITH THE MAP KINASE ERK2
Solved by: X-RAY, Resolution: 1.97A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 3zu7B 23%
[Model]
1059-1163 3zu7B 30%
[Model]
1059-1163 3zu7B 30%
[Model]
1067-1164 3zu7B 27%
[Model]
1112-1164 3zu7B 25%
[Model]

2xzd: CASPASE-3 IN COMPLEX WITH AN INHIBITORY DARPIN-3.4
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1128 2xzdG 21%
[Model]
1059-1160 2xzdG 27%
[Model]
1066-1163 2xzdG 28%
[Model]
1109-1164 2xzdG 25%
[Model]
1058-1129 2xzdH 22%
[Model]
1059-1163 2xzdH 29%
[Model]
1066-1163 2xzdH 28%
[Model]
1110-1164 2xzdH 25%
[Model]

2y0b: CASPASE-3 IN COMPLEX WITH AN INHIBITORY DARPIN-3.4_S76R
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1128 2y0bG 21%
[Model]
1058-1160 2y0bG 27%
[Model]
1065-1163 2y0bG 27%
[Model]
1109-1164 2y0bG 25%
[Model]
1059-1129 2y0bH 23%
[Model]
1059-1163 2y0bH 29%
[Model]
1065-1163 2y0bH 27%
[Model]
1109-1164 2y0bH 25%
[Model]

3nog: DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) BINDERS TO ACRB: OF THE INTERFACE
Solved by: X-RAY, Resolution: 3.34A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 3nogD 23%
[Model]
1061-1163 3nogE 31%
[Model]
1059-1163 3nogD 30%
[Model]
1061-1163 3nogE 31%
[Model]
1059-1164 3nogD 30%
[Model]
1065-1164 3nogE 31%
[Model]
1067-1163 3nogD 32%
[Model]
1111-1163 3nogE 25%
[Model]
1112-1164 3nogD 25%
[Model]

2xzt: CASPASE-3 IN COMPLEX WITH DARPIN-3.4_I78S
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1061-1128 2xztH 22%
[Model]
1059-1162 2xztH 28%
[Model]
1065-1164 2xztH 28%
[Model]
1109-1164 2xztH 25%
[Model]
1059-1128 2xztG 21%
[Model]
1058-1160 2xztG 27%
[Model]
1066-1164 2xztG 28%
[Model]
1110-1164 2xztG 25%
[Model]

1mj0: SANK E3_5: AN ARTIFICIAL ANKYRIN REPEAT PROTEIN
Solved by: X-RAY, Resolution: 2.03A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 1mj0A 23%
[Model]
1059-1163 1mj0A 30%
[Model]
1060-1163 1mj0A 31%
[Model]
1064-1163 1mj0A 27%
[Model]
1109-1164 1mj0A 25%
[Model]

3noc: DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) BINDERS TO ACRB: OF THE INTERFACE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 3nocD 23%
[Model]
1059-1129 3nocE 24%
[Model]
1059-1161 3nocE 30%
[Model]
1059-1163 3nocD 30%
[Model]
1058-1164 3nocE 32%
[Model]
1059-1164 3nocD 32%
[Model]
1066-1164 3nocD 30%
[Model]
1067-1164 3nocE 31%
[Model]
1111-1164 3nocD 24%
[Model]
1112-1164 3nocE 25%
[Model]

2jab: A DESIGNED ANKYRIN REPEAT PROTEIN EVOLVED TO PICOMOLAR AFFINITY TO HER2
Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1131 2jabA 23%
[Model]
1059-1166 2jabA 31%
[Model]
1066-1164 2jabA 29%
[Model]
1110-1164 2jabA 24%
[Model]
1059-1131 2jabB 23%
[Model]
1059-1166 2jabB 31%
[Model]
1066-1164 2jabB 29%
[Model]
1110-1164 2jabB 24%
[Model]
1059-1133 2jabC 23%
[Model]
1059-1166 2jabC 31%
[Model]
1067-1164 2jabC 30%
[Model]
1110-1163 2jabC 24%
[Model]

1svx: CRYSTAL STRUCTURE OF A DESIGNED SELECTED ANKYRIN REPEAT PROTEIN IN COMPLEX WITH THE MALTOSE BINDING PROTEIN
Solved by: X-RAY, Resolution: 2.24A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1131 1svxA 26%
[Model]
1059-1165 1svxA 28%
[Model]
1063-1159 1svxA 31%
[Model]
1065-1163 1svxA 27%
[Model]
1109-1163 1svxA 24%
[Model]

2j8s: DRUG EXPORT PATHWAY OF MULTIDRUG EXPORTER ACRB REVEALED BYDARPIN INHIBITORS
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 2j8sE 24%
[Model]
1060-1129 2j8sD 24%
[Model]
1059-1163 2j8sE 30%
[Model]
1060-1163 2j8sE 31%
[Model]
1067-1163 2j8sE 29%
[Model]
1059-1161 2j8sD 29%
[Model]
1060-1162 2j8sD 30%
[Model]
1064-1163 2j8sD 28%
[Model]
1111-1163 2j8sE 25%
[Model]
1109-1163 2j8sD 24%
[Model]

2qyj: CRYSTAL STRUCTURE OF A DESIGNED FULL CONSENSUS ANKYRIN
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 2qyjA 24%
[Model]
1059-1163 2qyjA 30%
[Model]
1065-1163 2qyjA 27%
[Model]
1062-1159 2qyjA 30%
[Model]
1111-1164 2qyjA 24%
[Model]

2xen: STRUCTURAL DETERMINANTS FOR IMPROVED THERMAL STABILITY OF DESIGNED ANKYRIN REPEAT PROTEINS WITH A REDESIGNED C- CAPPING MODULE.
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1058-1131 2xenA 26%
[Model]
1066-1164 2xenA 26%
[Model]
1110-1164 2xenA 24%
[Model]

4drx: GTP-TUBULIN IN COMPLEX WITH A DARPIN
Solved by: X-RAY, Resolution: 2.22A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1131 4drxF 23%
[Model]
1059-1164 4drxF 30%
[Model]
1060-1163 4drxF 31%
[Model]
1065-1164 4drxF 27%
[Model]
1109-1163 4drxF 24%
[Model]
1059-1131 4drxE 25%
[Model]
1058-1166 4drxE 31%
[Model]
1065-1163 4drxE 27%
[Model]
1059-1163 4drxE 30%
[Model]
1109-1164 4drxE 23%
[Model]

4grg: CRYSTAL STRUCTURE OF IGE COMPLEXED WITH E2_79, AN ANTI-IGE
Solved by: X-RAY, Resolution: 4.24A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1131 4grgA 23%
[Model]
1059-1131 4grgB 23%
[Model]
1058-1166 4grgA 27%
[Model]
1058-1166 4grgB 27%
[Model]
1065-1164 4grgA 27%
[Model]
1065-1164 4grgB 27%
[Model]
1109-1163 4grgA 24%
[Model]
1109-1163 4grgB 24%
[Model]

4dx6: TRANSPORT OF DRUGS BY THE MULTIDRUG TRANSPORTER ACRB INVOLACCESS AND A DEEP BINDING POCKET THAT ARE SEPARATED BY A
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 4dx6E 25%
[Model]
1060-1129 4dx6D 24%
[Model]
1059-1163 4dx6E 30%
[Model]
1059-1163 4dx6E 31%
[Model]
1067-1163 4dx6E 29%
[Model]
1059-1161 4dx6D 29%
[Model]
1060-1162 4dx6D 30%
[Model]
1064-1163 4dx6D 28%
[Model]
1112-1163 4dx6E 25%
[Model]
1109-1163 4dx6D 24%
[Model]

4dx5: TRANSPORT OF DRUGS BY THE MULTIDRUG TRANSPORTER ACRB INVOLACCESS AND A DEEP BINDING POCKET THAT ARE SEPARATED BY A
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 4dx5E 25%
[Model]
1060-1129 4dx5D 24%
[Model]
1059-1163 4dx5E 30%
[Model]
1059-1163 4dx5E 31%
[Model]
1067-1163 4dx5E 29%
[Model]
1059-1161 4dx5D 29%
[Model]
1060-1162 4dx5D 30%
[Model]
1064-1163 4dx5D 28%
[Model]
1112-1163 4dx5E 25%
[Model]
1109-1163 4dx5D 24%
[Model]

2y1l: CASPASE-8 IN COMPLEX WITH DARPIN-8.4
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1131 2y1lE 23%
[Model]
1059-1166 2y1lE 30%
[Model]
1059-1160 2y1lE 30%
[Model]
1067-1164 2y1lE 28%
[Model]
1111-1164 2y1lE 24%
[Model]
1059-1131 2y1lF 23%
[Model]
1059-1166 2y1lF 30%
[Model]
1059-1160 2y1lF 30%
[Model]
1067-1164 2y1lF 28%
[Model]
1111-1164 2y1lF 24%
[Model]

2xee: STRUCTURAL DETERMINANTS FOR IMPROVED THERMAL STABILITY OF DESIGNED ANKYRIN REPEAT PROTEINS WITH A REDESIGNED C- CAPPING MODULE.
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1131 2xeeA 29%
[Model]
1059-1164 2xeeA 30%
[Model]
1059-1164 2xeeA 30%
[Model]
1067-1163 2xeeA 28%
[Model]
1111-1164 2xeeA 24%
[Model]
1059-1131 2xeeB 29%
[Model]
1059-1164 2xeeB 30%
[Model]
1059-1164 2xeeB 30%
[Model]
1067-1163 2xeeB 28%
[Model]
1111-1164 2xeeB 24%
[Model]
1059-1131 2xeeC 29%
[Model]
1059-1164 2xeeC 30%
[Model]
1059-1164 2xeeC 30%
[Model]
1067-1163 2xeeC 28%
[Model]
1111-1164 2xeeC 24%
[Model]
1059-1131 2xeeD 29%
[Model]
1059-1164 2xeeD 30%
[Model]
1059-1164 2xeeD 30%
[Model]
1067-1163 2xeeD 28%
[Model]
1111-1164 2xeeD 24%
[Model]

4dx7: TRANSPORT OF DRUGS BY THE MULTIDRUG TRANSPORTER ACRB INVOLACCESS AND A DEEP BINDING POCKET THAT ARE SEPARATED BY A
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 4dx7E 25%
[Model]
1060-1129 4dx7D 24%
[Model]
1059-1163 4dx7E 30%
[Model]
1059-1163 4dx7E 31%
[Model]
1067-1163 4dx7E 29%
[Model]
1059-1161 4dx7D 29%
[Model]
1060-1162 4dx7D 30%
[Model]
1064-1163 4dx7D 28%
[Model]
1112-1163 4dx7E 25%
[Model]
1109-1163 4dx7D 24%
[Model]

2xeh: STRUCTURAL DETERMINANTS FOR IMPROVED THERMAL STABILITY OF DESIGNED ANKYRIN REPEAT PROTEINS WITH A REDESIGNED C- CAPPING MODULE.
Solved by: X-RAY, Resolution: 1.81A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1131 2xehA 30%
[Model]
1060-1164 2xehA 31%
[Model]
1059-1164 2xehA 31%
[Model]
1067-1163 2xehA 28%
[Model]
1111-1164 2xehA 24%
[Model]
1059-1131 2xehB 30%
[Model]
1060-1164 2xehB 31%
[Model]
1059-1164 2xehB 31%
[Model]
1067-1163 2xehB 28%
[Model]
1111-1164 2xehB 24%
[Model]
1059-1131 2xehC 30%
[Model]
1060-1164 2xehC 31%
[Model]
1059-1164 2xehC 31%
[Model]
1067-1163 2xehC 28%
[Model]
1111-1164 2xehC 24%
[Model]

3zuv: CRYSTAL STRUCTURE OF A DESIGNED SELECTED ANKYRIN REPEAT PROTEIN IN COMPLEX WITH THE PHOSPHORYLATED MAP KINASE ERK
Solved by: X-RAY, Resolution: 2.72A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1131 3zuvB 25%
[Model]
1058-1164 3zuvB 30%
[Model]
1067-1164 3zuvB 30%
[Model]
1111-1164 3zuvB 24%
[Model]
1058-1129 3zuvD 24%
[Model]
1058-1163 3zuvD 29%
[Model]
1065-1163 3zuvD 29%
[Model]
1110-1163 3zuvD 24%
[Model]

4f6r: TUBULIN:STATHMIN-LIKE DOMAIN COMPLEX
Solved by: X-RAY, Resolution: 2.64A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1133 4f6rD 23%
[Model]
1059-1166 4f6rD 30%
[Model]
1064-1163 4f6rD 27%
[Model]
1058-1164 4f6rD 29%
[Model]
1109-1164 4f6rD 23%
[Model]

3hg0: CRYSTAL STRUCTURE OF A DARPIN IN COMPLEX WITH ORF49 FROM LACTOCOCCAL PHAGE TP901-1
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1131 3hg0D 23%
[Model]
1058-1166 3hg0D 28%
[Model]
1067-1164 3hg0D 26%
[Model]
1111-1164 3hg0D 22%
[Model]

4dui: DARPIN D1 BINDING TO TUBULIN BETA CHAIN (NOT IN COMPLEX)
Solved by: X-RAY, Resolution: 1.16A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1131 4duiA 23%
[Model]
1064-1166 4duiA 32%
[Model]
1062-1163 4duiA 25%
[Model]
1058-1163 4duiA 30%
[Model]
1106-1163 4duiA 22%
[Model]

3q9u: IN SILICO AND IN VITRO CO-EVOLUTION OF A HIGH AFFINITY COMPROTEIN-PROTEIN INTERFACE
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1060-1129 3q9uC 21%
[Model]
1059-1163 3q9uC 30%
[Model]
1059-1163 3q9uC 30%
[Model]
1064-1163 3q9uC 29%
[Model]
1107-1164 3q9uC 22%
[Model]
1061-1129 3q9uD 22%
[Model]
1059-1163 3q9uD 30%
[Model]
1059-1164 3q9uD 30%
[Model]
1064-1164 3q9uD 29%
[Model]
1106-1164 3q9uD 22%
[Model]

3q9n: IN SILICO AND IN VITRO CO-EVOLUTION OF A HIGH AFFINITY COMPROTEIN-PROTEIN INTERFACE
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1060-1129 3q9nC 21%
[Model]
1059-1163 3q9nC 30%
[Model]
1059-1163 3q9nC 30%
[Model]
1064-1163 3q9nC 29%
[Model]
1107-1164 3q9nC 22%
[Model]
1061-1129 3q9nD 22%
[Model]
1059-1163 3q9nD 30%
[Model]
1059-1164 3q9nD 30%
[Model]
1064-1164 3q9nD 29%
[Model]
1106-1164 3q9nD 22%
[Model]

2bkk: CRYSTAL STRUCTURE OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE APH(3')-IIIA IN COMPLEX WITH THE INHIBITOR AR_3A
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1129 2bkkB 23%
[Model]
1059-1163 2bkkB 30%
[Model]
1059-1163 2bkkB 30%
[Model]
1065-1162 2bkkB 28%
[Model]
1109-1164 2bkkB 21%
[Model]
1060-1129 2bkkD 23%
[Model]
1059-1164 2bkkD 29%
[Model]
1060-1163 2bkkD 30%
[Model]
1064-1163 2bkkD 28%
[Model]
1109-1165 2bkkD 21%
[Model]

2v4h: NEMO CC2-LZ DOMAIN - 1D5 DARPIN COMPLEX
Solved by: X-RAY, Resolution: 2.9A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1059-1133 2v4hC 24%
[Model]
1059-1133 2v4hD 24%
[Model]
1059-1166 2v4hC 29%
[Model]
1059-1166 2v4hD 29%
[Model]
1062-1163 2v4hD 25%
[Model]
1065-1164 2v4hC 26%
[Model]
1111-1164 2v4hC 22%
[Model]
1106-1164 2v4hD 20%
[Model]

3d9h: CRYSTAL STRUCTURE OF THE SPLICE VARIANT OF HUMAN ASB9 (HASB9-2), AN ANKYRIN REPEAT PROTEIN
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1060-1163 3d9hA 19%
[Model]
1059-1156 3d9hA 15%
[Model]
1059-1160 3d9hA 23%
[Model]
1059-1163 3d9hA 17%
[Model]
1103-1161 3d9hA 17%
[Model]
1106-1161 3d9hA 21%
[Model]
1065-1085 3d9hA 19%
[Model]

3zkj: CRYSTAL STRUCTURE OF ANKYRIN REPEAT AND SOCS BOX-CONTAININPROTEIN 9 (ASB9) IN COMPLEX WITH ELONGINB AND ELONGINC
Solved by: X-RAY, Resolution: 2.58A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1061-1130 3zkjA 11%
[Model]
1066-1163 3zkjA 20%
[Model]
1059-1163 3zkjA 23%
[Model]
1059-1156 3zkjA 15%
[Model]
1063-1159 3zkjA 18%
[Model]
1105-1163 3zkjA 19%
[Model]
1111-1163 3zkjA 25%
[Model]
1066-1163 3zkjD 20%
[Model]
1059-1163 3zkjD 23%
[Model]
1060-1155 3zkjD 16%
[Model]
1060-1161 3zkjD 17%
[Model]
1064-1163 3zkjD 17%
[Model]
1062-1157 3zkjD 10%
[Model]
1111-1164 3zkjD 23%
[Model]

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.