Welcome to the SWISS-MODEL Repository

The SWISS-MODEL Repository is a database of annotated three-dimensional comparative protein structure models generated by the fully automated homology-modelling pipeline SWISS-MODEL.

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List of model organisms regularly updated in Repository

The proteomes of the following organisms are regularly updated in SWISS-MODEL Repository. A reference proteome is the complete proteome of a representative, well-studied model organism or an organism of interest for biomedical research. Reference proteomes are retrieved from the UniProt database.

Organism Taxonomy Number of models
Human Homo Sapiens 110370
Mouse Mus musculus 101271
Caenorhabditis elegans C. elegans 36671
Escherichia coli (strain K12) E.coli K12 5447
Mouse-ear cress A. thaliana 67050
Fruit Fly D. melanogaster 43042
Bakers Yeast S. cerevisiae 8450
Caulobacter crescentus C. crescentus 5029
Mycobacterium tuberculosis M. tuberculosis 5197
Pseudomonas aeruginosa P. aeruginosa 7661
Staphylococcus aureus S. aureus 3086
Plasmodium falciparum P. falciparum 6150

Statistics based on UniProt release 2014_10



The current release of the SWISS-MODEL Repository consists of 3171514 model entries for 2302378 unique sequences in the UniProt database (2014_10). In the last update cycle (2014-11-06) 57829 unique sequences were considered for revision. See the [release notes] of the last updates.

NOTE: The SWISS-MODEL repository contains theoretically calculated models, which may contain significant errors.

SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.