Welcome to the SWISS-MODEL Repository

The SWISS-MODEL Repository is a database of annotated three-dimensional comparative protein structure models generated by the fully automated homology-modelling pipeline SWISS-MODEL.

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List of model organisms regularly updated in Repository

The proteomes of the following organisms are regularly updated in SWISS-MODEL Repository. A reference proteome is the complete proteome of a representative, well-studied model organism or an organism of interest for biomedical research. Reference proteomes are retrieved from the UniProt database.

Organism Taxonomy Number of models
Human Homo Sapiens 85086
Mouse Mus musculus 77259
Caenorhabditis elegans C. elegans 36187
Escherichia coli (strain K12) E.coli K12 5674
Mouse-ear cress A. thaliana 56328
Fruit Fly D. melanogaster 37230
Bakers Yeast S. cerevisiae 9044
Caulobacter crescentus C. crescentus 5203
Mycobacterium tuberculosis M. tuberculosis 5510
Pseudomonas aeruginosa P. aeruginosa 8071
Staphylococcus aureus S. aureus 3254
Plasmodium falciparum P. falciparum 6577

Statistics based on UniProt release 2015_10

The current release of the SWISS-MODEL Repository consists of 3093270 model entries for 2252404 unique sequences in the UniProt database (2015_10). In the last update cycle (2015-10-15) 85734 unique sequences were considered for revision. See the [release notes] of the last updates.

NOTE: The SWISS-MODEL repository contains theoretically calculated models, which may contain significant errors.

SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.