UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
Q20402 (EGG3_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Protein tyrosine phosphatase-like protein egg-3; Egg sterile protein 3; | |
P49809 (EGL10_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Regulator of G-protein signaling egl-10; Egg-laying defective protein 10; | |
Q22492 (HEXA_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Beta-hexosaminidase A; Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase; | |
O44400 (F37C4_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Protein F37C4.5; | |
Q21086 (GNL3_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Guanine nucleotide-binding protein-like 3 homolog; Nucleostemin-1; | |
P34645 (YOQ7_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Uncharacterized protein ZK512.7; | |
Q94129 (WRT4_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Warthog protein 4; Protein M75; Warthog protein 4 N-product; Warthog protein 4 C-product; | |
Q20263 (GOT1_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Probable Golgi transport protein 1; Enlarged amphid sheath glia protein 1; | |
O02173 (TPPC2_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Probable trafficking protein particle complex subunit 2; | |
Q9N5M2 (PFD2_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Prefoldin subunit 2; | |
P32739 (NAD2_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Sodium-dependent high-affinity dicarboxylate transporter 2; Na(+)/dicarboxylate cotransporter 2; | |
Q9Y194 (SGPL_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Sphingosine-1-phosphate lyase; Sphingosine-1-phosphate aldolase; | |
Q21815 (MIG23_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Nucleoside-diphosphatase mig-23; Abnormal cell migration protein 23; | |
P02513 (HSP17_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Heat shock protein Hsp-16.48/Hsp-16.49; | |
P06581 (HSP16_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Heat shock protein Hsp-16.41; | |
Q09967 (EGG1_CAEEL) | Swiss-Prot | Caenorhabditis elegans | LDL receptor repeat-containing protein egg-1; Egg sterile protein 1; | |
Q20757 (PUF5_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Pumilio domain-containing protein 5; | |
Q09421 (YRN7_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Uncharacterized protein R07B1.7; | |
O61749 (SRP19_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Probable signal recognition particle 19 kDa protein; | |
Q19869 (RL26_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Large ribosomal subunit protein uL24; 60S ribosomal protein L26; | |
P90815 (RU1C_CAEEL) | Swiss-Prot | Caenorhabditis elegans | U1 small nuclear ribonucleoprotein C; | |
Q9TZH6 (PHS_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Putative pterin-4-alpha-carbinolamine dehydratase; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; | |
Q10574 (LIN32_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Protein lin-32; Abnormal cell lineage protein 32; | |
Q8MYM9 (COA8_CAEEL) | Swiss-Prot | Caenorhabditis elegans | COA8 family protein Y39B6A.34, mitochondrial; APOPT family protein Y39B6A.34, mitochondrial; | |
Q21832 (RBM8A_CAEEL) | Swiss-Prot | Caenorhabditis elegans | RNA-binding protein rnp-4; RNA-binding protein 8A; RNA-binding protein Y14; Ribonucleoprotein rnp-4; | |
P34890 (SPE17_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Spermatogenesis-defective protein spe-17; | |
O17405 (PLDL_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Probable phospholipase D F09G2.8; Choline phosphatase F09G2.8; Phosphatidylcholine-hydrolyzing phospholipase D F09G2.8; | |
Q9XVI9 (MLC5_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Myosin-2 essential light chain; | |
A0A5E4M3Q4 (SYD9_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Zinc finger protein syd-9; Synapse defective protein 9; | |
Q07085 (EST2_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Esterase CM06B1; | |
P34410 (TWK7_CAEEL) | Swiss-Prot | Caenorhabditis elegans | TWiK family of potassium channels protein 7; | |
Q21123 (INX7_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Innexin-7; Protein opu-7; | |
G5EGU9 (SZY20_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Suppressor of zyg-1 protein 20; | |
Q18919 (RCORB_CAEEL) | Swiss-Prot | Caenorhabditis elegans | REST corepressor spr-1; CoREST; Suppressor of presenilin 1; | |
Q20375 (SPTC2_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Serine palmitoyltransferase 2; Long chain base biosynthesis protein 2; Serine-palmitoyl-CoA transferase 2; | |
G5EFC3 (KCNAG_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Potassium voltage-gated channel protein egl-36; Egg-laying defective protein 36; | |
G5EFE7 (FUT8_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Alpha-(1,6)-fucosyltransferase; Fucosyltransferase 8; GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,6-fucosyltransferase; GDP-fucose--glycoprotein fucosyltransferase; Glycoprotein 6-alpha-L-fucosyltransferase; | |
Q19293 (NEMP_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Nuclear envelope integral membrane protein; | |
Q10576 (P4HA1_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Prolyl 4-hydroxylase subunit alpha-1; Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-1; Protein dumpy-18; | |
Q22549 (INX10_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Innexin-10; Protein opu-10; | |
Q95XG8 (NRAMC_CAEEL) | Swiss-Prot | Caenorhabditis elegans | NRAMP-like transporter smf-3; DMT-1; Divalent metal transporter smf-3; | |
Q9XYB7 (NHR8_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Nuclear hormone receptor family member nhr-8; | |
Q22875 (SHOC2_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Leucine-rich repeat protein soc-2; Suppressor of Clr protein 2; Suppressor of activated let-60 Ras protein 8; | |
Q09389 (YR43_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Uncharacterized protein F47D12.3; | |
P49196 (RS12_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Small ribosomal subunit protein eS12; 40S ribosomal protein S12; | |
Q9XXN3 (NEPR1_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Nuclear envelope phosphatase-regulatory subunit 1 homolog; Transmembrane protein 188; | |
P48158 (RL23_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Large ribosomal subunit protein uL14; 60S ribosomal protein L23; | |
Q19724 (NDUS6_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial; Complex I-13kD-A; NADH-ubiquinone oxidoreductase 13 kDa-A subunit; | |
Q03571 (CPB1_CAEEL) | Swiss-Prot | Caenorhabditis elegans | Cytoplasmic polyadenylation element-binding protein 1; | |
Q9N358 (TCPQ_CAEEL) | Swiss-Prot | Caenorhabditis elegans | T-complex protein 1 subunit theta; CCT-theta; |
Caenorhabditis elegans is a free-living, transparent nematode, about 1 mm in length, that lives in temperate soil environments. The name means "elegant new rod".
C. elegans is a model organism for nervous system development as well as senescence. Of interest to researchers is the phenomenon of eutely: each adult hermaphrodite has exactly 959 and each adult male exactly 1031 somatic cell nuclei
C. elegans was the first multicellular organism to have its whole genome sequenced in 1998.
From left to right: i) The number of proteins in the reference proteome of Caenorhabditis elegans, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Caenorhabditis elegans for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Caenorhabditis elegans, please visit UniProtKB.
You can easily download the latest protein sequences for Caenorhabditis elegans proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2024_02 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
19,832 | 12,782 | 23,005 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Caenorhabditis elegans reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Caenorhabditis elegans proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 12-mer | 14-mer | 16-mer | 20-mer | 24-mer | 26-mer | 32-mer | 34-mer | 40-mer | 41-mer | 44-mer | 48-mer | 55-mer | 60-mer | 62-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
20,250 | 1,849 | 161 | 377 | 106 | 101 | 8 | 37 | 8 | 13 | 38 | 6 | 8 | 4 | 10 | 1 | 6 | 1 | 10 | 3 | 2 | 1 | 2 | 2 | 1 |