|
3vc8.1.A |
RNA-directed RNA polymerase
Crystal structure of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59 |
0.12 |
0.00 |
61.36 |
0.18 |
411-500 |
X-ray |
2.00 |
homo-dimer |
|
BLAST |
0.49 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3vc8.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3vc8.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3vc8.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3vc8.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3vc8.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFS- 3vc8.1 ----------TFEEMALTTFMITKESYCKLKNSV--SDVAFNRYLSLYNKYRYFSGKMDTAAYREAACSQLAKAMETFNH
target NSGSDVLYQPPQTSITSAVLQ 3vc8.1 NNGNDVLYQPPTASVTTSFLQ
|
✓
|
3vcb.1.A |
RNA-directed RNA polymerase
C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59 |
0.12 |
0.17 |
61.36 |
0.18 |
411-500 |
X-ray |
2.40 |
homo-dimer |
|
BLAST |
0.49 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3vcb.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3vcb.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3vcb.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3vcb.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3vcb.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFS- 3vcb.1 ----------TFEEMALTTFMITKESYSKLKNSV--SDVAFNRYLSLYNKYRYFSGKMDTAAYREAACSQLAKAMETFNH
target NSGSDVLYQPPQTSITSAVLQ 3vcb.1 NNGNDVLYQPPTASVTTSFLQ
|
|
3vcb.1.B |
RNA-directed RNA polymerase
C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59 |
0.12 |
0.17 |
61.36 |
0.18 |
411-500 |
X-ray |
2.40 |
homo-dimer |
|
BLAST |
0.49 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3vcb.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3vcb.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3vcb.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3vcb.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3vcb.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFS- 3vcb.1 ----------TFEEMALTTFMITKESYSKLKNSV--SDVAFNRYLSLYNKYRYFSGKMDTAAYREAACSQLAKAMETFNH
target NSGSDVLYQPPQTSITSAVLQ 3vcb.1 NNGNDVLYQPPTASVTTSFLQ
|
|
3vc8.1.A |
RNA-directed RNA polymerase
Crystal structure of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59 |
0.12 |
0.00 |
60.23 |
0.18 |
411-500 |
X-ray |
2.00 |
homo-dimer |
|
HHblits |
0.49 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3vc8.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3vc8.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3vc8.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3vc8.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3vc8.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFS- 3vc8.1 ----------TFEEMALTTFMITKESYCKLKNS--VSDVAFNRYLSLYNKYRYFSGKMDTAAYREAACSQLAKAMETFNH
target NSGSDVLYQPPQTSITSAVLQ 3vc8.1 NNGNDVLYQPPTASVTTSFLQ
|
|
3vcb.1.A |
RNA-directed RNA polymerase
C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59 |
0.12 |
0.17 |
60.23 |
0.18 |
411-500 |
X-ray |
2.40 |
homo-dimer |
|
HHblits |
0.49 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3vcb.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3vcb.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3vcb.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3vcb.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3vcb.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFS- 3vcb.1 ----------TFEEMALTTFMITKESYSKLKNS--VSDVAFNRYLSLYNKYRYFSGKMDTAAYREAACSQLAKAMETFNH
target NSGSDVLYQPPQTSITSAVLQ 3vcb.1 NNGNDVLYQPPTASVTTSFLQ
|
|
3vcb.1.B |
RNA-directed RNA polymerase
C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59 |
0.12 |
0.17 |
60.23 |
0.18 |
411-500 |
X-ray |
2.40 |
homo-dimer |
|
HHblits |
0.49 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3vcb.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3vcb.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3vcb.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3vcb.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3vcb.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFS- 3vcb.1 ----------TFEEMALTTFMITKESYSKLKNS--VSDVAFNRYLSLYNKYRYFSGKMDTAAYREAACSQLAKAMETFNH
target NSGSDVLYQPPQTSITSAVLQ 3vcb.1 NNGNDVLYQPPTASVTTSFLQ
|
|
3gzf.1.A |
Replicase polyprotein 1ab
Structure of the C-terminal domain of nsp4 from Feline Coronavirus |
0.12 |
0.14 |
40.43 |
0.19 |
403-498 |
X-ray |
2.76 |
homo-dimer |
|
BLAST |
0.40 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3gzf.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3gzf.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3gzf.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3gzf.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3gzf.1 --------------------------------------------------------------------------------
target RVVFNGVSF-STFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFS 3gzf.1 --LFEGDKFVGSFESAAMGTFVIDMRSYETLVNST--SLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYS
target NSGSDVLYQPPQTSITSAVLQ 3gzf.1 VSRNDKLYTPPTVSVNSTL--
|
|
3gzf.1.B |
Replicase polyprotein 1ab
Structure of the C-terminal domain of nsp4 from Feline Coronavirus |
0.11 |
0.14 |
40.43 |
0.19 |
403-498 |
X-ray |
2.76 |
homo-dimer |
|
BLAST |
0.40 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3gzf.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3gzf.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3gzf.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3gzf.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3gzf.1 --------------------------------------------------------------------------------
target RVVFNGVSF-STFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFS 3gzf.1 --LFEGDKFVGSFESAAMGTFVIDMRSYETLVNST--SLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYS
target NSGSDVLYQPPQTSITSAVLQ 3gzf.1 VSRNDKLYTPPTVSVNSTL--
|
|
3gzf.1.A |
Replicase polyprotein 1ab
Structure of the C-terminal domain of nsp4 from Feline Coronavirus |
0.09 |
0.14 |
39.78 |
0.19 |
403-497 |
X-ray |
2.76 |
homo-dimer |
|
HHblits |
0.40 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3gzf.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3gzf.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3gzf.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3gzf.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3gzf.1 --------------------------------------------------------------------------------
target RVVFNGVS-FSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFS 3gzf.1 --LFEGDKFVGSFESAAMGTFVIDMRSYETLVNS--TSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYS
target NSGSDVLYQPPQTSITSAVLQ 3gzf.1 VSRNDKLYTPPTVSVNST---
|
|
3gzf.1.B |
Replicase polyprotein 1ab
Structure of the C-terminal domain of nsp4 from Feline Coronavirus |
0.11 |
0.13 |
39.78 |
0.19 |
403-497 |
X-ray |
2.76 |
homo-dimer |
|
HHblits |
0.40 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3gzf.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3gzf.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3gzf.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3gzf.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3gzf.1 --------------------------------------------------------------------------------
target RVVFNGVS-FSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFS 3gzf.1 --LFEGDKFVGSFESAAMGTFVIDMRSYETLVNS--TSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYS
target NSGSDVLYQPPQTSITSAVLQ 3gzf.1 VSRNDKLYTPPTVSVNST---
|
|
6fyx.1.2 |
KLLA0B06182p
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) |
0.01 |
|
14.75 |
0.12 |
416-492 |
EM |
3.05 |
hetero-1-1-1-1-1-1-… |
15 x MG, 5 x ZN, 1 x MET, 1 x GCP |
HHblits |
0.29 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 6fyx.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 6fyx.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 6fyx.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 6fyx.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 6fyx.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 6fyx.1 ---------------AKHAVVLDQDKFDRIMKE--------------APTYRYVSVSVLVDRFKL--GGSLARVALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 6fyx.1 NEGIIKPVSKHSKQAIYTRATA--------
|
|
3jap.1.2 |
eS25
Structure of a partial yeast 48S preinitiation complex in closed conformation |
0.01 |
|
14.75 |
0.12 |
416-492 |
EM |
0.00 |
hetero-1-1-1-1-1-1-… |
7 x MG, 4 x ZN, 1 x MET, 1 x GCP |
HHblits |
0.29 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3jap.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3jap.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3jap.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3jap.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3jap.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 3jap.1 ---------------AKHAVVLDQDKFDRIMKE--------------APTYRYVSVSVLVDRFKL--GGSLARVALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 3jap.1 NEGIIKPVSKHSKQAIYTRATA--------
|
|
3j80.1.3 |
eS25
CryoEM structure of 40S-eIF1-eIF1A preinitiation complex |
0.01 |
|
14.75 |
0.12 |
416-492 |
EM |
0.00 |
hetero-1-1-1-1-1-1-… |
5 x MG, 3 x ZN |
HHblits |
0.29 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3j80.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3j80.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3j80.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3j80.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3j80.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 3j80.1 ---------------AKHAVVLDQDKFDRIMKE--------------APTYRYVSVSVLVDRFKL--GGSLARVALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 3j80.1 NEGIIKPVSKHSKQAIYTRATA--------
|
|
3j81.1.0 |
eS25
CryoEM structure of a partial yeast 48S preinitiation complex |
0.01 |
|
14.75 |
0.12 |
416-492 |
EM |
0.00 |
hetero-1-1-1-1-1-1-… |
5 x MG, 3 x ZN, 1 x MET |
HHblits |
0.29 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3j81.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3j81.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3j81.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3j81.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3j81.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 3j81.1 ---------------AKHAVVLDQDKFDRIMKE--------------APTYRYVSVSVLVDRFKL--GGSLARVALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 3j81.1 NEGIIKPVSKHSKQAIYTRATA--------
|
|
3jam.1.0 |
eS25
CryoEM structure of 40S-eIF1A-eIF1 complex from yeast |
0.01 |
|
14.75 |
0.12 |
416-492 |
EM |
0.00 |
hetero-1-1-1-1-1-1-… |
8 x MG, 3 x ZN |
HHblits |
0.29 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 3jam.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 3jam.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 3jam.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 3jam.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 3jam.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 3jam.1 ---------------AKHAVVLDQDKFDRIMKE--------------APTYRYVSVSVLVDRFKL--GGSLARVALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 3jam.1 NEGIIKPVSKHSKQAIYTRATA--------
|
|
6uz7.70.A |
40S ribosomal protein S25
K.lactis 80S ribosome with p/PE tRNA and eIF5B |
0.02 |
|
14.75 |
0.12 |
416-492 |
EM |
0.00 |
monomer |
|
HHblits |
0.29 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 6uz7.70 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 6uz7.70 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 6uz7.70 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 6uz7.70 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 6uz7.70 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 6uz7.70 ---------------AKHAVVLDQDKFDRIMKE--------------APTYRYVSVSVLVDRFKL--GGSLARVALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 6uz7.70 NEGIIKPVSKHSKQAIYTRATA--------
|
|
6tnu.26.A |
40S ribosomal protein S25-A
Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs. |
0.02 |
0.00 |
20.00 |
0.12 |
416-491 |
EM |
0.00 |
monomer |
|
HHblits |
0.30 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 6tnu.26 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 6tnu.26 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 6tnu.26 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 6tnu.26 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 6tnu.26 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 6tnu.26 ---------------AQHAVILDQEKYDRILKEV--------------PTYRYVSVSVLVDRLKI--GGSLARIALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 6tnu.26 KEGIIKPISKHSKQAIYTRAT---------
|
|
6t7t.28.A |
40S ribosomal protein S25-A
Structure of yeast 80S ribosome stalled on poly(A) tract. |
0.02 |
0.00 |
20.00 |
0.12 |
416-491 |
EM |
0.00 |
monomer |
|
HHblits |
0.30 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 6t7t.28 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 6t7t.28 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 6t7t.28 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 6t7t.28 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 6t7t.28 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 6t7t.28 ---------------AQHAVILDQEKYDRILKEV--------------PTYRYVSVSVLVDRLKI--GGSLARIALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 6t7t.28 KEGIIKPISKHSKQAIYTRAT---------
|
|
6tb3.26.A |
40S ribosomal protein S25-A
yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex |
0.02 |
0.00 |
20.00 |
0.12 |
416-491 |
EM |
0.00 |
monomer |
|
HHblits |
0.30 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 6tb3.26 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 6tb3.26 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 6tb3.26 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 6tb3.26 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 6tb3.26 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 6tb3.26 ---------------AQHAVILDQEKYDRILKEV--------------PTYRYVSVSVLVDRLKI--GGSLARIALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 6tb3.26 KEGIIKPISKHSKQAIYTRAT---------
|
|
6t4q.25.A |
40S ribosomal protein S25-A
Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination. |
0.02 |
0.00 |
20.00 |
0.12 |
416-491 |
EM |
0.00 |
monomer |
|
HHblits |
0.30 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 6t4q.25 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 6t4q.25 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 6t4q.25 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 6t4q.25 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 6t4q.25 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 6t4q.25 ---------------AQHAVILDQEKYDRILKEV--------------PTYRYVSVSVLVDRLKI--GGSLARIALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 6t4q.25 KEGIIKPISKHSKQAIYTRAT---------
|
|
7a1g.1.3 |
40S ribosomal protein S25-A
Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complex |
0.02 |
0.00 |
20.00 |
0.12 |
416-491 |
EM |
0.00 |
monomer |
10 x MG, 2 x ZN, 2 x SF4, 1 x ADP |
HHblits |
0.30 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 7a1g.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 7a1g.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 7a1g.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 7a1g.1 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 7a1g.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 7a1g.1 ---------------AQHAVILDQEKYDRILKEV--------------PTYRYVSVSVLVDRLKI--GGSLARIALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 7a1g.1 KEGIIKPISKHSKQAIYTRAT---------
|
|
7b7d.26.A |
40S ribosomal protein S25-A
Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs |
0.02 |
0.00 |
20.00 |
0.12 |
416-491 |
EM |
0.00 |
monomer |
|
HHblits |
0.30 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 7b7d.26 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 7b7d.26 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 7b7d.26 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 7b7d.26 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 7b7d.26 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 7b7d.26 ---------------AQHAVILDQEKYDRILKEV--------------PTYRYVSVSVLVDRLKI--GGSLARIALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 7b7d.26 KEGIIKPISKHSKQAIYTRAT---------
|
|
7zpq.26.A |
40S ribosomal protein S25
Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1) |
0.02 |
0.00 |
20.00 |
0.12 |
416-491 |
EM |
0.00 |
monomer |
|
HHblits |
0.30 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 7zpq.26 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 7zpq.26 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 7zpq.26 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 7zpq.26 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 7zpq.26 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 7zpq.26 ---------------AQHAVILDQEKYDRILKEV--------------PTYRYVSVSVLVDRLKI--GGSLARIALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 7zpq.26 KEGIIKPISKHSKQAIYTRAT---------
|
|
7zuw.26.A |
40S ribosomal protein S25
Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae |
0.02 |
0.00 |
20.00 |
0.12 |
416-491 |
EM |
0.00 |
monomer |
|
HHblits |
0.30 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 7zuw.26 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 7zuw.26 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 7zuw.26 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 7zuw.26 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 7zuw.26 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 7zuw.26 ---------------AQHAVILDQEKYDRILKEV--------------PTYRYVSVSVLVDRLKI--GGSLARIALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 7zuw.26 KEGIIKPISKHSKQAIYTRAT---------
|
|
7zrs.26.A |
40S ribosomal protein S25
Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map |
0.01 |
|
20.00 |
0.12 |
416-491 |
EM |
0.00 |
monomer |
|
HHblits |
0.30 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 7zrs.26 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 7zrs.26 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 7zrs.26 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 7zrs.26 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 7zrs.26 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 7zrs.26 ---------------AQHAVILDQEKYDRILKEV--------------PTYRYVSVSVLVDRLKI--GGSLARIALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 7zrs.26 KEGIIKPISKHSKQAIYTRAT---------
|
|
7zux.26.A |
40S ribosomal protein S25-A
Collided ribosome in a disome unit from S. cerevisiae |
0.02 |
|
20.00 |
0.12 |
416-491 |
EM |
0.00 |
monomer |
|
HHblits |
0.30 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 7zux.26 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 7zux.26 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 7zux.26 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 7zux.26 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 7zux.26 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALN---- 7zux.26 ---------------AQHAVILDQEKYDRILKEV--------------PTYRYVSVSVLVDRLKI--GGSLARIALRHLE
target ------DFSNSGSDVLYQPPQTSITSAVLQ 7zux.26 KEGIIKPISKHSKQAIYTRAT---------
|
|
6p25.1.A |
Dolichyl-phosphate-mannose--protein mannosyltransferase 1
Structure of S. cerevisiae protein O-mannosyltransferase Pmt1-Pmt2 complex bound to the sugar donor and a peptide acceptor |
0.00 |
0.00 |
10.26 |
0.08 |
288-328 |
EM |
0.00 |
monomer |
2 x NAG, 3 x CPL, 1 x NNM, 1 x PRO-TYR-THR |
HHblits |
0.25 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 6p25.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 6p25.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 6p25.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 6p25.1 -----------------------------------------------ASLGALTVILMYMT--LRYSGVRMWVALMSAIC
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 6p25.1 FAVENSYV------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSN 6p25.1 --------------------------------------------------------------------------------
target SGSDVLYQPPQTSITSAVLQ 6p25.1 --------------------
|
|
6s7t.1.A |
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Cryo-EM structure of human oligosaccharyltransferase complex OST-B |
0.00 |
0.00 |
3.57 |
0.06 |
286-315 |
EM |
0.00 |
monomer |
10 x EGY, 13 x KZB, 2 x MG, 1 x 0K3, 1 x ALA-ALA-ASN-ALA-THR-ALA-ALA, 2 x NAG-NAG, 2 x NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN |
HHblits |
0.26 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 6s7t.1 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 6s7t.1 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 6s7t.1 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 6s7t.1 ---------------------------------------------LAPTFSGLTSISTFLLT--RELWNQGAGLL-----
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 6s7t.1 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSN 6s7t.1 --------------------------------------------------------------------------------
target SGSDVLYQPPQTSITSAVLQ 6s7t.1 --------------------
|
|
4v8m.28.A |
40S RIBOSOMAL PROTEIN S25, PUTATIVE
High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome |
0.00 |
|
29.17 |
0.05 |
411-434 |
EM |
5.57 |
monomer |
|
HHblits |
0.32 |
target KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGG 4v8m.28 --------------------------------------------------------------------------------
target SYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFK 4v8m.28 --------------------------------------------------------------------------------
target DASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGR 4v8m.28 --------------------------------------------------------------------------------
target WVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTL 4v8m.28 --------------------------------------------------------------------------------
target LFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKR 4v8m.28 --------------------------------------------------------------------------------
target RVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSN 4v8m.28 ----------RTREALQNAVMFDKETMDKLMKEV----------------------------------------------
target SGSDVLYQPPQTSITSAVLQ 4v8m.28 --------------------
|