------------------------------------------------------------------------------- ----------------- Project: ORF9b protein (ORF9b) | P0DTD2 ----------------- --------------------------------- 1SagwD ---------------------------------- ------------------------------------------------------------------------------- ------------------------------ meld02.stdout ------------------------------ ProMod3: Version 3.3.0 ProMod3: Starting modelling based on a raw model. ProMod3: Removed 1 terminal gap(s). ProMod3: Trying to close small deletions (no. of gap(s): 2). ProMod3: Trying to merge 2 gap(s) with distance 0. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to merge 2 gap(s) with distance 1. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to merge 2 gap(s) with distance 2. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to merge 2 gap(s) with distance 3. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to fill 2 gap(s) by Monte Carlo. ProMod3: Resolved A.ARG25-(MENAVGRDQNNVG)-A.PRO39 by filling A.THR24-(RMENAVGRDQNNVG)-A.PRO39 (6 candidates, BB) ProMod3: Resolved B.THR24-(RMENAVGRDQNNVG)-B.PRO39 by filling B.THR24-(RMENAVGRDQNNVGP)-B.LYS40 (6 candidates, BB) ProMod3: Rebuilding sidechains. ProMod3: Minimize energy. ------------------------------ meld02.stderr ------------------------------ Trying to build homo-dimer from homo-dimer