ORF9b protein (ORF9b) | P0DTD2

Created: May 5, 2023, 9:34 p.m. at 21:34

Models Name Description GMQE QSQE Seq Id Coverage Range Method Resolution Oligo-state Ligands Found by Seq Similarity
✓
 6z4u.1.A
Protein 9b
X-ray Crystallographic Structure of Orf9b from SARS-CoV-2
 0.74 0.66 100.00 1.00 1-97 X-ray 1.95 homo-dimer HHblits 0.60
6z4u.1.B
Protein 9b
X-ray Crystallographic Structure of Orf9b from SARS-CoV-2
 0.73 0.65 100.00 1.00 1-97 X-ray 1.95 homo-dimer HHblits 0.60
7kdt.1.B
ORF9b protein
Human Tom70 in complex with SARS CoV2 Orf9b
 0.32 0.00 100.00 1.00 1-97 EM 0.00 monomer HHblits 0.60
7dhg.1.B
ORF9b protein
Crystal structure of SARS-CoV-2 Orf9b complex with human TOM70
 0.27 0.00 100.00 1.00 1-97 X-ray 2.20 monomer HHblits 0.60
7ye7.1.A
ORF9b protein
Crystal structure of SARS-CoV-2 soluble dimeric ORF9b
 0.67 0.69 100.00 1.00 1-97 X-ray 2.95 homo-dimer 1 x DD9 HHblits 0.60
7ye8.1.A
ORF9b protein
Crystal structure of SARS-CoV-2 refolded dimeric ORF9b
 0.71 0.69 100.00 1.00 1-97 X-ray 3.01 homo-dimer 1 x OCT HHblits 0.60
7ye7.1.B
ORF9b protein
Crystal structure of SARS-CoV-2 soluble dimeric ORF9b
 0.71 0.70 100.00 1.00 1-97 X-ray 2.95 homo-dimer 1 x DD9 HHblits 0.60
7ye7.2.A
ORF9b protein
Crystal structure of SARS-CoV-2 soluble dimeric ORF9b
 0.68 0.66 100.00 1.00 1-97 X-ray 2.95 homo-dimer 1 x OCT HHblits 0.60
7ye8.2.A
ORF9b protein
Crystal structure of SARS-CoV-2 refolded dimeric ORF9b
 0.69 100.00 1.00 1-97 X-ray 3.01 homo-dimer 1 x OCT HHblits 0.60
7ye7.2.B
ORF9b protein
Crystal structure of SARS-CoV-2 soluble dimeric ORF9b
 0.71 100.00 1.00 1-97 X-ray 2.95 homo-dimer 1 x OCT HHblits 0.60
7ye8.2.B
ORF9b protein
Crystal structure of SARS-CoV-2 refolded dimeric ORF9b
 0.70 100.00 1.00 1-97 X-ray 3.01 homo-dimer 1 x OCT HHblits 0.60
7ye8.1.B
ORF9b protein
Crystal structure of SARS-CoV-2 refolded dimeric ORF9b
 0.77 100.00 1.00 1-97 X-ray 3.01 homo-dimer 1 x OCT HHblits 0.60
2cme.1.B
HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN
 0.61 0.00 78.48 0.81 8-97 X-ray 2.80 monomer 1 x D10 HHblits 0.52
2cme.1.B
HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN
 0.60 0.00 80.52 0.79 10-97 X-ray 2.80 monomer 1 x D10 BLAST 0.53
2cme.1.A
HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN
 0.61 0.00 78.21 0.80 8-97 X-ray 2.80 monomer 1 x D10 HHblits 0.52
2cme.3.A
HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN
 0.61 0.00 79.22 0.79 8-97 X-ray 2.80 monomer 1 x D10 HHblits 0.52
2cme.1.A
HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN
 0.60 0.00 80.26 0.78 10-97 X-ray 2.80 monomer 1 x D10 BLAST 0.53
2cme.2.A
HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN
 0.59 0.54 80.26 0.78 9-97 X-ray 2.80 homo-dimer 1 x D10 HHblits 0.53
✓
 2cme.2.A
HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN
 0.58 0.54 81.33 0.77 10-97 X-ray 2.80 homo-dimer 1 x D10 BLAST 0.53
2cme.3.A
HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN
 0.59 0.00 81.33 0.77 10-97 X-ray 2.80 monomer 1 x D10 BLAST 0.53
2aus.2.A
pseudouridine synthase
Crystal structure of the archaeal box H/ACA sRNP Nop10-Cbf5 complex
 0.09 17.95 0.40 38-76 X-ray 2.10 hetero-1-1-mer 1 x ZN HHblits 0.31
2aus.1.A
pseudouridine synthase
Crystal structure of the archaeal box H/ACA sRNP Nop10-Cbf5 complex
 0.09 17.95 0.40 38-76 X-ray 2.10 hetero-2-2-mer 2 x ZN HHblits 0.31
3mqk.1.A
tRNA pseudouridine synthase B
Cbf5-Nop10-Gar1 complex binding with 17mer RNA containing ACA trinucleotide
 0.10 15.38 0.40 38-76 X-ray 2.80 hetero-oligomer 1 x C-G-A-U-C-C-A-C-A HHblits 0.30
2rfk.1.D
Probable tRNA pseudouridine synthase B
Substrate RNA Positioning in the Archaeal H/ACA Ribonucleoprotein Complex
 0.06 15.38 0.40 38-76 X-ray 2.87 hetero-1-1-1-mer 1 x ZN HHblits 0.30
3lwo.1.A
Pseudouridine synthase Cbf5
Structure of H/ACA RNP bound to a substrate RNA containing 5BrU
 0.08 15.38 0.40 38-76 X-ray 2.86 hetero-oligomer 1 x ZN HHblits 0.30
3hax.1.A
Probable tRNA pseudouridine synthase B
Crystal structure of a substrate-bound Gar1-minus H/ACA RNP from Pyrococcus furiosus
 0.10 15.38 0.40 38-76 X-ray 2.11 hetero-1-1-1-mer 1 x ZN HHblits 0.30
2hvy.1.B
Probable tRNA pseudouridine synthase B
Crystal structure of an H/ACA box RNP from Pyrococcus furiosus
 0.09 15.38 0.40 38-76 X-ray 2.30 hetero-1-1-1-1-mer 1 x ATP, 1 x ZN HHblits 0.30
3hjw.1.A
Pseudouridine synthase Cbf5
Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA
 0.10 15.38 0.40 38-76 X-ray 2.35 hetero-1-1-1-mer 1 x ZN, 1 x K HHblits 0.30
3hjy.1.A
pseudouridine synthase CBf5
Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA
 0.09 15.38 0.40 38-76 X-ray 3.65 hetero-1-1-mer HHblits 0.30
2apo.1.A
Probable tRNA pseudouridine synthase B
Crystal Structure of the Methanococcus jannaschii Cbf5 Nop10 Complex
 0.09 18.42 0.39 38-75 X-ray 1.95 hetero-oligomer 1 x ZN, 2 x K HHblits 0.31
2ey4.1.A
Probable tRNA pseudouridine synthase B
Crystal Structure of a Cbf5-Nop10-Gar1 Complex
 0.06 15.79 0.39 38-75 X-ray 2.11 hetero-1-1-1-mer 1 x ZN HHblits 0.30
2ey4.2.A
Probable tRNA pseudouridine synthase B
Crystal Structure of a Cbf5-Nop10-Gar1 Complex
 0.07 15.79 0.39 38-75 X-ray 2.11 hetero-1-1-1-mer 1 x ZN HHblits 0.30
7qep.17.A
40S ribosomal protein S25
Cryo-EM structure of the ribosome from Encephalitozoon cuniculi
 0.00 26.32 0.20 51-69 EM 0.00 monomer HHblits 0.34