ORF3a protein (ORF3a) | P0DTC3

Created: May 5, 2023, 9:33 p.m. at 21:33

Models Name Description GMQE QSQE Seq Id Coverage Range Method Resolution Oligo-state Ligands Found by Seq Similarity
✓
 6xdc.1.A
ORF3a protein
Cryo-EM structure of SARS-CoV-2 ORF3a
 0.69 0.69 100.00 1.00 1-275 EM 0.00 homo-dimer HHblits 0.62
6xdc.1.B
ORF3a protein
Cryo-EM structure of SARS-CoV-2 ORF3a
 0.68 0.69 100.00 1.00 1-275 EM 0.00 homo-dimer HHblits 0.62
7kjr.1.A
ORF3a protein
Cryo-EM structure of SARS-CoV-2 ORF3a
 0.72 0.73 100.00 1.00 1-275 EM 0.00 homo-dimer 2 x PEE HHblits 0.62
7kjr.1.B
ORF3a protein
Cryo-EM structure of SARS-CoV-2 ORF3a
 0.72 0.73 100.00 1.00 1-275 EM 0.00 homo-dimer 2 x PEE HHblits 0.62
8eqj.1.A
ORF3a protein
Structure of SARS-CoV-2 Orf3a in late endosome/lysosome-like membrane environment, MSP1D1 nanodisc
 0.69 0.71 100.00 1.00 1-275 EM 0.00 homo-dimer 4 x PEE HHblits 0.62
8eqj.1.B
ORF3a protein
Structure of SARS-CoV-2 Orf3a in late endosome/lysosome-like membrane environment, MSP1D1 nanodisc
 0.69 0.71 100.00 1.00 1-275 EM 0.00 homo-dimer 4 x PEE HHblits 0.62
8eqt.1.A
ORF3a protein
Structure of SARS-CoV-2 Orf3a in plasma membrane-like environment, MSP1D1 nanodisc
 0.70 0.70 100.00 1.00 1-275 EM 0.00 homo-dimer 4 x PEE HHblits 0.62
8eqt.1.B
ORF3a protein
Structure of SARS-CoV-2 Orf3a in plasma membrane-like environment, MSP1D1 nanodisc
 0.70 0.70 100.00 1.00 1-275 EM 0.00 homo-dimer 4 x PEE HHblits 0.62
8equ.1.A
ORF3a protein
Structure of SARS-CoV-2 Orf3a in late endosome/lysosome-like environment, Saposin A nanodisc
 0.70 100.00 1.00 1-275 EM 0.00 hetero-2-2-4-mer 2 x PEE HHblits 0.62
8equ.1.B
ORF3a protein
Structure of SARS-CoV-2 Orf3a in late endosome/lysosome-like environment, Saposin A nanodisc
 0.70 100.00 1.00 1-275 EM 0.00 hetero-2-2-4-mer 2 x PEE HHblits 0.62
8eqs.1.A
ORF3a protein
Structure of SARS-CoV-1 Orf3a in late endosome/lysosome-like environment, MSP1D1 nanodisc
 0.65 0.73 72.99 1.00 1-275 EM 0.00 homo-dimer 2 x PEE HHblits 0.54
7vgr.1.E
Membrane protein
SARS-CoV-2 M protein dimer (long form) in complex with YN7756_1 Fab
 0.13 16.50 0.37 128-239 EM 0.00 hetero-2-2-2-mer HHblits 0.26
7vgr.1.F
Membrane protein
SARS-CoV-2 M protein dimer (long form) in complex with YN7756_1 Fab
 0.13 16.50 0.37 128-239 EM 0.00 hetero-2-2-2-mer HHblits 0.26
7vgs.1.A
Membrane protein
SARS-CoV-2 M protein dimer (short form) in complex with YN7717_9 Fab
 0.13 16.50 0.37 128-239 EM 0.00 hetero-2-2-2-mer HHblits 0.26
7vgs.1.D
Membrane protein
SARS-CoV-2 M protein dimer (short form) in complex with YN7717_9 Fab
 0.13 16.50 0.37 128-239 EM 0.00 hetero-2-2-2-mer HHblits 0.26
8ctk.1.A
Membrane protein
Cryo-EM structure of SARS-CoV-2 M protein in a lipid nanodisc
 0.13 16.50 0.37 128-239 EM 0.00 homo-dimer HHblits 0.26
8ctk.1.B
Membrane protein
Cryo-EM structure of SARS-CoV-2 M protein in a lipid nanodisc
 0.13 16.50 0.37 128-239 EM 0.00 homo-dimer HHblits 0.26
7y9b.1.A
Membrane protein
Crystal structure of the membrane (M) protein of a SARS-COV-2-related coronavirus
 0.15 14.56 0.37 128-239 X-ray 3.21 homo-dimer 2 x N8E HHblits 0.25
6dvz.1.A
Transient receptor potential cation channel subfamily V member 3
Cryo-EM structure of mouse TRPV3-Y564A in complex with 2-Aminoethoxydiphenyl borate (2-APB)
 0.03 13.21 0.19 65-117 EM 0.00 homo-tetramer 12 x FZ4 HHblits 0.27
7ca3.1.A
Gamma-aminobutyric acid type B receptor subunit 1
Cryo-EM structure of human GABA(B) receptor bound to the positive allosteric modulator rac-BHFF
 0.02 6.52 0.17 42-87 EM 0.00 hetero-1-1-mer 3 x CLR, 1 x FN0 HHblits 0.22
7ca5.1.A
Gamma-aminobutyric acid type B receptor subunit 1
Cryo-EM structure of human GABA(B) receptor in apo state
 0.02 6.52 0.17 42-87 EM 0.00 hetero-1-1-mer HHblits 0.22
7cum.1.A
Gamma-aminobutyric acid type B receptor subunit 1
Cryo-EM structure of human GABA(B) receptor bound to the antagonist CGP54626
 0.02 6.52 0.17 42-87 EM 0.00 hetero-1-1-mer 1 x 2BV, 15 x CLR HHblits 0.22
7ca3.1.B
Gamma-aminobutyric acid type B receptor subunit 2
Cryo-EM structure of human GABA(B) receptor bound to the positive allosteric modulator rac-BHFF
 0.02 17.50 0.15 40-79 EM 0.00 hetero-1-1-mer 3 x CLR, 1 x FN0 HHblits 0.28
7ca5.1.B
Gamma-aminobutyric acid type B receptor subunit 2
Cryo-EM structure of human GABA(B) receptor in apo state
 0.01 17.50 0.15 40-79 EM 0.00 hetero-1-1-mer HHblits 0.28
7cum.1.B
Gamma-aminobutyric acid type B receptor subunit 2
Cryo-EM structure of human GABA(B) receptor bound to the antagonist CGP54626
 0.02 17.50 0.15 40-79 EM 0.00 hetero-1-1-mer 1 x 2BV, 15 x CLR HHblits 0.28
4or2.1.A
Soluble cytochrome b562, Metabotropic glutamate receptor 1
Human class C G protein-coupled metabotropic glutamate receptor 1 in complex with a negative allosteric modulator
 0.01 7.32 0.15 40-80 X-ray 2.80 homo-dimer 2 x FM9, 6 x CLR, 1 x OLA, 3 x OLC HHblits 0.24
4oo9.1.A
Metabotropic glutamate receptor 5, Lysozyme, Metabotropic glutamate receptor 5 chimera
Structure of the human class C GPCR metabotropic glutamate receptor 5 transmembrane domain in complex with the negative allosteric modulator mavoglurant
 0.00 0.00 0.08 111-133 X-ray 2.60 monomer 4 x OLA, 1 x 2U8, 1 x MES HHblits 0.26
7c7q.1.B
Gamma-aminobutyric acid type B receptor subunit 2
Cryo-EM structure of the baclofen/BHFF-bound human GABA(B) receptor in active state
 0.00 9.09 0.08 113-134 EM 0.00 hetero-1-1-mer 8 x NAG, 1 x FN0, 1 x 2C0 HHblits 0.25
6w2y.1.A
Gamma-aminobutyric acid type B receptor subunit 1
CryoEM Structure of GABAB1b Homodimer
 0.00 9.52 0.08 113-133 EM 0.00 homo-dimer 4 x NAG, 2 x MG, 2 x L9Q, 2 x SGG, 2 x NAG-NAG HHblits 0.28
6w2x.1.A
Gamma-aminobutyric acid type B receptor subunit 1
CryoEM Structure of Inactive GABAB Heterodimer
 0.00 9.52 0.08 113-133 EM 0.00 hetero-1-1-mer 2 x NAG, 2 x L9Q, 1 x SGG, 1 x MG, 2 x NAG-NAG HHblits 0.28
6wiv.1.A
Gamma-aminobutyric acid type B receptor subunit 1
Structure of human GABA(B) receptor in an inactive state
 0.00 9.52 0.08 113-133 EM 0.00 hetero-1-1-mer 4 x NAG, 1 x CA, 1 x U3G, 10 x CLR, 1 x U3D HHblits 0.28
6n51.1.A
Metabotropic glutamate receptor 5
Metabotropic Glutamate Receptor 5 bound to L-quisqualate and Nb43
 0.00 0.00 0.07 114-133 EM 0.00 hetero-2-2-mer 4 x NAG, 2 x QUS HHblits 0.25
6uo8.1.A
Gamma-aminobutyric acid type B receptor subunit 1
Human metabotropic GABA(B) receptor bound to agonist SKF97541 and positive allosteric modulator GS39783
 0.00 10.53 0.07 114-132 EM 0.00 hetero-1-1-mer 1 x QD7, 6 x NAG, 1 x QDA, 2 x NAG-NAG, 1 x NAG-NAG-BMA HHblits 0.29
6uo9.1.A
Gamma-aminobutyric acid type B receptor subunit 1
Human metabotropic GABA(B) receptor bound to agonist SKF97541 in its intermediate state 2
 0.00 10.53 0.07 114-132 EM 0.00 hetero-1-1-mer 1 x QD7, 2 x NAG, 4 x NAG-NAG, 1 x NAG-NAG-BMA HHblits 0.29
6uoa.1.A
Gamma-aminobutyric acid type B receptor subunit 1
Human metabotropic GABA(B) receptor in its intermediate state 1
 0.00 10.53 0.07 114-132 EM 0.00 hetero-1-1-mer 1 x NAG, 5 x NAG-NAG HHblits 0.29
6vjm.1.A
Gamma-aminobutyric acid type B receptor subunit 1
Human metabotropic GABA(B) receptor in its apo state
 0.00 10.53 0.07 114-132 EM 0.00 hetero-1-1-mer 2 x NAG, 1 x NAG-NAG-FUC, 3 x NAG-NAG HHblits 0.29
6wiv.1.B
Gamma-aminobutyric acid type B receptor subunit 2
Structure of human GABA(B) receptor in an inactive state
 0.00 10.53 0.07 115-133 EM 0.00 hetero-1-1-mer 4 x NAG, 1 x CA, 1 x U3G, 10 x CLR, 1 x U3D HHblits 0.27
7c7s.1.B
Gamma-aminobutyric acid type B receptor subunit 2
Cryo-EM structure of the CGP54626-bound human GABA(B) receptor in inactive state.
 0.00 10.53 0.07 115-133 EM 0.00 hetero-1-1-mer 8 x NAG, 1 x 2BV HHblits 0.27
7eb2.1.F
Gamma-aminobutyric acid type B receptor subunit 2
Cryo-EM structure of human GABA(B) receptor-Gi protein complex
 0.00 10.53 0.07 115-133 EM 0.00 hetero-1-1-1-1-1-1-… 1 x 2C0, 1 x FN0 HHblits 0.27
7epc.1.A
Isoform 3 of Metabotropic glutamate receptor 7
Cryo-EM structure of inactive mGlu7 homodimer
 0.00 5.56 0.07 115-132 EM 0.00 homo-dimer HHblits 0.30
7sil.1.A
Isoform 1 of Extracellular calcium-sensing receptor
Structure of positive allosteric modulator-bound active human calcium-sensing receptor
 0.00 5.00 0.07 114-133 EM 0.00 homo-dimer 6 x NAG, 2 x TCR, 8 x CA, 2 x 9IG, 8 x CLR, 4 x NAG-NAG HHblits 0.21
7sin.1.A
Isoform 1 of Extracellular calcium-sensing receptor
Structure of negative allosteric modulator-bound inactive human calcium-sensing receptor
 0.00 5.00 0.07 114-133 EM 0.00 homo-dimer 2 x YP1 HHblits 0.21
7sin.1.B
Isoform 1 of Extracellular calcium-sensing receptor
Structure of negative allosteric modulator-bound inactive human calcium-sensing receptor
 0.00 5.00 0.07 114-133 EM 0.00 homo-dimer 2 x YP1 HHblits 0.21
7she.1.A
G-protein coupled receptor 158
Cryo-EM structure of human GPR158
 0.00 11.11 0.07 41-58 EM 0.00 homo-dimer 1 x PEE, 1 x EIJ, 22 x CLR HHblits 0.26
7she.1.B
G-protein coupled receptor 158
Cryo-EM structure of human GPR158
 0.00 11.11 0.07 41-58 EM 0.00 homo-dimer 1 x PEE, 1 x EIJ, 22 x CLR HHblits 0.26
7shf.1.C
G-protein coupled receptor 158
Cryo-EM structure of GPR158 coupled to the RGS7-Gbeta5 complex
 0.00 11.11 0.07 41-58 EM 0.00 hetero-1-1-2-mer 22 x CLR, 1 x EIJ, 1 x PEE HHblits 0.26
7shf.1.D
G-protein coupled receptor 158
Cryo-EM structure of GPR158 coupled to the RGS7-Gbeta5 complex
 0.00 11.11 0.07 41-58 EM 0.00 hetero-1-1-2-mer 22 x CLR, 1 x EIJ, 1 x PEE HHblits 0.26
7e9g.1.A
Metabotropic glutamate receptor 2
Cryo-EM structure of Gi-bound metabotropic glutamate receptor mGlu2
 0.00 5.56 0.07 116-133 EM 0.00 hetero-2-1-1-1-1-2-… 2 x 40F, 1 x HZR HHblits 0.25
7e9g.1.B
Metabotropic glutamate receptor 2
Cryo-EM structure of Gi-bound metabotropic glutamate receptor mGlu2
 0.00 5.56 0.07 116-133 EM 0.00 hetero-2-1-1-1-1-2-… 2 x 40F, 1 x HZR HHblits 0.25
6w2x.1.B
Gamma-aminobutyric acid type B receptor subunit 2
CryoEM Structure of Inactive GABAB Heterodimer
 0.00 11.76 0.06 116-132 EM 0.00 hetero-1-1-mer 2 x NAG, 2 x L9Q, 1 x SGG, 1 x MG, 2 x NAG-NAG HHblits 0.29
7dgd.1.A
Metabotropic glutamate receptor 1
apo state of class C GPCR
 0.00 0.00 0.06 117-133 EM 0.00 homo-dimer HHblits 0.25
7dgd.1.B
Metabotropic glutamate receptor 1
apo state of class C GPCR
 0.00 0.00 0.06 117-133 EM 0.00 homo-dimer HHblits 0.25
6uo8.1.B
Gamma-aminobutyric acid type B receptor subunit 2
Human metabotropic GABA(B) receptor bound to agonist SKF97541 and positive allosteric modulator GS39783
 0.00 12.50 0.06 117-132 EM 0.00 hetero-1-1-mer 1 x QD7, 6 x NAG, 1 x QDA, 2 x NAG-NAG, 1 x NAG-NAG-BMA HHblits 0.29
6uo9.1.B
Gamma-aminobutyric acid type B receptor subunit 2
Human metabotropic GABA(B) receptor bound to agonist SKF97541 in its intermediate state 2
 0.00 12.50 0.06 117-132 EM 0.00 hetero-1-1-mer 1 x QD7, 2 x NAG, 4 x NAG-NAG, 1 x NAG-NAG-BMA HHblits 0.29
6uoa.1.B
Gamma-aminobutyric acid type B receptor subunit 2
Human metabotropic GABA(B) receptor in its intermediate state 1
 0.00 12.50 0.06 117-132 EM 0.00 hetero-1-1-mer 1 x NAG, 5 x NAG-NAG HHblits 0.29
6vjm.1.B
Gamma-aminobutyric acid type B receptor subunit 2
Human metabotropic GABA(B) receptor in its apo state
 0.00 12.50 0.06 117-132 EM 0.00 hetero-1-1-mer 2 x NAG, 1 x NAG-NAG-FUC, 3 x NAG-NAG HHblits 0.29
7epa.1.A
Metabotropic glutamate receptor 2
Cryo-EM structure of inactive mGlu2 homodimer
 0.00 6.25 0.06 117-132 EM 0.00 homo-dimer HHblits 0.29
7c7q.1.A
Gamma-aminobutyric acid type B receptor subunit 1
Cryo-EM structure of the baclofen/BHFF-bound human GABA(B) receptor in active state
 0.00 13.33 0.05 117-131 EM 0.00 hetero-1-1-mer 8 x NAG, 1 x FN0, 1 x 2C0 HHblits 0.33
6ctf.1.A
Glutamate transporter homolog
Crystal structure of GltPh fast mutant - R276S/M395R
 0.00 26.67 0.05 259-273 X-ray 4.05 homo-trimer 3 x ASP HHblits 0.33
7epb.1.A
Metabotropic glutamate receptor 2
Cryo-EM structure of LY354740-bound mGlu2 homodimer
 0.00 6.25 0.06 117-132 EM 0.00 hetero-2-2-mer 2 x 40F HHblits 0.27
7e9h.1.A
Metabotropic glutamate receptor 4
Cryo-EM structure of Gi-bound metabotropic glutamate receptor mGlu4
 0.00 13.33 0.05 117-131 EM 0.00 hetero-2-1-1-1-1-mer HHblits 0.31
7e9h.1.B
Metabotropic glutamate receptor 4
Cryo-EM structure of Gi-bound metabotropic glutamate receptor mGlu4
 0.00 13.33 0.05 117-131 EM 0.00 hetero-2-1-1-1-1-mer HHblits 0.31
4izm.1.A
425aa long hypothetical proton glutamate symport protein
Crystal structure of GltPh L66C-S300C mutant crosslinked with divalent mercury
 0.00 13.33 0.05 147-161 X-ray 4.50 homo-trimer 3 x ASP, 3 x HG HHblits 0.28
7wi8.1.A
Metabotropic glutamate receptor 3
Cryo-EM structure of inactive mGlu3 bound to LY341495
 0.00 6.67 0.05 117-131 EM 0.00 homo-dimer 2 x NAG, 2 x Z99 HHblits 0.25
7wih.1.A
Metabotropic glutamate receptor 3
Cryo-EM structure of LY2794193-bound mGlu3
 0.00 6.67 0.05 117-131 EM 0.00 homo-dimer 2 x NAG, 2 x CWY HHblits 0.25