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Secondary Structure
None DSSP PSIPRED SSpro
Colour Scheme
Fade Mismatches Enhance Mismatches
Confidencegradient Confidenceclass Indels Chain Unique Chain Rainbow 2° Structure Clustal Hydrophobic Size Charged Polar Proline Ser/Thr Cysteine Aliphatic Aromatic No Colour
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NGL PV

### nsp10 / nsp14 hetero-oligomeric complex | P0DTD1 PRO_0000449628, PRO_0000449631

### Created: May 5, 2023, 9:33 p.m. at 21:33

Order by:

Oligo-State
  Hetero-1-1-mer
GMQE
  0.84
QMEANDisCo Global:
  0.78 ± 0.05

Ligands
  1 x G3A, 1 x MG, 1 x SAH, 4 x ZN
  1 x GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE

  G3A.8: | 17 residues within 4Å: Chain B: N.306, C.309, R.310, Q.313, K.336, I.338, W.385, N.386, N.388, F.401, Y.420, N.422, K.423, F.426, T.428, F.506, Ligand: SAH.7 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:N.306, B:N.306, B:R.310, B:R.310, B:I.338, B:N.386, B:N.388 Salt bridges: B:R.310, B:R.310, B:R.310 pi-Stacking: B:W.385, B:F.426 pi-Cation interactions: B:R.310, B:R.310

  1 x MAGNESIUM ION

  MG.6: | 3 residues within 4Å: Chain B: D.90, A.187, E.191 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.90, B:E.191, B:E.191

  1 x S-ADENOSYL-L-HOMOCYSTEINE

  SAH.7: | 14 residues within 4Å: Chain B: W.292, G.333, N.334, P.335, D.352, A.353, Q.354, L.366, F.367, Y.368, W.385, N.386, C.387, V.389 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:A.353, B:Q.354, B:Y.368, B:Y.368, B:W.385, B:W.385

  4 x ZINC ION

  ZN.1: | 4 residues within 4Å: Chain A: C.74, C.77, H.83, C.90 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.74, A:C.77, A:H.83, A:C.90
  ZN.2: | 4 residues within 4Å: Chain A: C.117, C.120, C.128, C.130 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.117, A:C.120, A:C.128, A:C.130
  ZN.3: | 4 residues within 4Å: Chain B: C.207, C.210, C.226, H.229 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:C.207, B:C.226, B:H.229
  ZN.4: | 4 residues within 4Å: Chain B: H.257, C.261, H.264, C.279 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.257, B:C.261, B:H.264, B:C.279

QMEANDisCo Local
QMEAN Z-Scores

Template
5c8s.1 Guanine-N7 methyltransferase, Non-structural protein 10

Seq Identity
  95.50%
Coverage

Biounit Oligo State | Hetero-dimer
QSQE | -
Method | X-ray, 3.33 Å
Overall Seq Identity | 95.50%
Overall Seq Similarity | 0.62

Target | Seq Identity | Seq Similarity | Range | Coverage
--- | --- | --- | --- | ---
Guanine-N7 methyltransferase | 95.07% | 0.62 | B: 1-525 | 1.00
Non-structural protein 10 | 97.12% | 0.63 | A: 1-131 | 1.00

Ligand | Added to Model | Description
--- | --- | ---
G3A | ✓ | GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE
MG | ✓ | MAGNESIUM ION
SAH | ✓ | S-ADENOSYL-L-HOMOCYSTEINE
ZN | ✓ | ZINC ION
ZN | ✓ | ZINC ION
ZN | ✓ | ZINC ION
ZN | ✓ | ZINC ION
ZN | ✕ - Clashing with protein. | ZINC ION

Model-Template Alignment

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