|  | SWISS-MODEL Homology Modelling Report

## Model Building Report

This document lists the results for the homology modelling project "Papain-like protease nsp3 | P0DTD1 PRO_0000449621" submitted to SWISS-MODEL workspace on May 5, 2023, 9:33 p.m..The submitted primary amino acid sequence is given in Table T1.

If you use any results in your research, please cite the relevant publications:

- Waterhouse, A., Bertoni, M., Bienert, S., Studer, G., Tauriello, G., Gumienny, R., Heer, F.T., de Beer, T.A.P., Rempfer, C., Bordoli, L., Lepore, R., Schwede, T. SWISS-MODEL: homology modelling of protein structures and complexes. Nucleic Acids Res. 46(W1), W296-W303 (2018).
- Bienert, S., Waterhouse, A., de Beer, T.A.P., Tauriello, G., Studer, G., Bordoli, L., Schwede, T. The SWISS-MODEL Repository - new features and functionality. Nucleic Acids Res. 45, D313-D319 (2017).
- Studer, G., Tauriello, G., Bienert, S., Biasini, M., Johner, N., Schwede, T. ProMod3 - A versatile homology modelling toolbox. PLOS Comp. Biol. 17(1), e1008667 (2021).
- Studer, G., Rempfer, C., Waterhouse, A.M., Gumienny, G., Haas, J., Schwede, T. QMEANDisCo - distance constraints applied on model quality estimation. Bioinformatics 36, 1765-1771 (2020).
- Bertoni, M., Kiefer, F., Biasini, M., Bordoli, L., Schwede, T. Modeling protein quaternary structure of homo- and hetero-oligomers beyond binary interactions by homology. Scientific Reports 7 (2017).

## Results

The SWISS-MODEL template library (SMTL version 2023-05-05, PDB release 2023-04-28) was searched with for evolutionary related structures matching the target sequence in Table T1. For details on the template search, see Materials and Methods. Overall 1456 templates were found (Table T2).

## Models

The following models were built (see Materials and Methods "Model Building"):

### Model #02 | File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global
--- | --- | --- | --- | --- | --- | ---
| PDB | ProMod3 3.3.0 | monomer (matching prediction) | 1 x ZN: ZINC ION; | 0.14 | 0.80 ± 0.05

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | --- | ---
6w9c.1.A | 100.00 | homo-trimer | 0.26 | HHblits | X-ray | 2.70Å | 0.63 | 748 - 1060 | 0.16 | Non-structural protein 3

### Included Ligands

Ligand | Description
--- | ---
1 x ZN | ZINC ION

### Excluded ligands

Ligand Name.Number | Reason for Exclusion | Description
--- | --- | ---
CL.2 | Not biologically relevant. | CHLORIDE ION
CL.4 | Not biologically relevant. | CHLORIDE ION
CL.7 | Not biologically relevant. | CHLORIDE ION
ZN.3 | Binding site not conserved. | ZINC ION
ZN.5 | Binding site not conserved. | ZINC ION
ZN.6 | Binding site not conserved. | ZINC ION

    Target    APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLD
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    EWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEED
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    WLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTA
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    VVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLN
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    LEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYT
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    SNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF
    6w9c.1.A  -------------------------EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF

    Target    YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA
    6w9c.1.A  YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA

    Target    YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ
    6w9c.1.A  YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ

    Target    FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE
    6w9c.1.A  FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE

    Target    YKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFA
    6w9c.1.A  YKGPITDVFYKENSYTTTIK------------------------------------------------------------

    Target    DDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKP
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    VETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAA
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    YVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQ
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    LCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLG
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    MPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFF
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    YVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRA
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    TRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKN
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    GSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVS
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    DVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLS
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    HQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNL
    6w9c.1.A  --------------------------------------------------------------------------------

    Target    PFKLTCATTRQVVNVVTTKIALKGG
    6w9c.1.A  -------------------------

### Model #07 | File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global
--- | --- | --- | --- | --- | --- | ---
| PDB | ProMod3 3.3.0 | monomer | 1 x ACE-UB4-DPP-GLY-GVE: VIR250; 1 x ZN: ZINC ION; | 0.14 | 0.79 ± 0.05

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | --- | ---
6wuu.2.A | 99.69 | monomer | 0.00 | BLAST | X-ray | 2.79Å | 0.62 | 744 - 1061 | 0.16 | Non-structural protein 3

### Included Ligands

Ligand | Description
--- | ---
1 x ACE-UB4-DPP-GLY-GVE | VIR250
1 x ZN | ZINC ION

### Excluded ligands

Ligand Name.Number | Reason for Exclusion | Description
--- | --- | ---
MG.3 | Not in contact with model. | MAGNESIUM ION

    Target    APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLD
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    EWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEED
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    WLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTA
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    VVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLN
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    LEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYT
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    SNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF
    6wuu.2.A  -----------------------MREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF

    Target    YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA
    6wuu.2.A  YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA

    Target    YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ
    6wuu.2.A  YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ

    Target    FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE
    6wuu.2.A  FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE

    Target    YKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFA
    6wuu.2.A  YKGPITDVFYKENSYTTTIKP-----------------------------------------------------------

    Target    DDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKP
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    VETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAA
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    YVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQ
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    LCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLG
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    MPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFF
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    YVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRA
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    TRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKN
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    GSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVS
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    DVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLS
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    HQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNL
    6wuu.2.A  --------------------------------------------------------------------------------

    Target    PFKLTCATTRQVVNVVTTKIALKGG
    6wuu.2.A  -------------------------

### Model #10 | File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global
--- | --- | --- | --- | --- | --- | ---
| PDB | ProMod3 3.3.0 | monomer | 1 x TTT: 5-AMINO-2-METHYL-N-[(1R)-1-NAPHTHALEN-1-YLETHYL]BENZAMIDE; 1 x ZN: ZINC ION; | 0.14 | 0.79 ± 0.05

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | --- | ---
3e9s.1.A | 82.86 | monomer | 0.00 | HHblits | X-ray | 2.50Å | 0.57 | 746 - 1059 | 0.16 | Non-structural protein 3

### Included Ligands

Ligand | Description
--- | ---
1 x TTT | 5-AMINO-2-METHYL-N-[(1R)-1-NAPHTHALEN-1-YLETHYL]BENZAMIDE
1 x ZN | ZINC ION

### Excluded ligands

Ligand Name.Number | Reason for Exclusion | Description
--- | --- | ---
CL.3 | Not biologically relevant. | CHLORIDE ION
CL.4 | Not biologically relevant. | CHLORIDE ION

    Target    APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLD
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    EWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEED
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    WLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTA
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    VVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLN
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    LEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYT
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    SNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF
    3e9s.1.A  -------------------------EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTF

    Target    YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA
    3e9s.1.A  FVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQLEVKFNAPALQEA

    Target    YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ
    3e9s.1.A  YYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDN

    Target    FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE
    3e9s.1.A  LKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSE

    Target    YKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFA
    3e9s.1.A  YKGPVTDVFYKETSYTTTIK------------------------------------------------------------

    Target    DDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKP
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    VETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAA
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    YVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQ
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    LCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLG
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    MPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFF
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    YVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRA
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    TRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKN
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    GSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVS
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    DVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLS
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    HQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNL
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    PFKLTCATTRQVVNVVTTKIALKGG
    3e9s.1.A  -------------------------

### Model #01 | File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global
--- | --- | --- | --- | --- | --- | ---
| PDB | ProMod3 3.3.0 | monomer | 1 x TTT: 5-AMINO-2-METHYL-N-[(1R)-1-NAPHTHALEN-1-YLETHYL]BENZAMIDE; 1 x ZN: ZINC ION; | 0.14 | 0.79 ± 0.05

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | --- | ---
3e9s.1.A | 82.86 | monomer | 0.00 | BLAST | X-ray | 2.50Å | 0.57 | 746 - 1059 | 0.16 | Non-structural protein 3

### Included Ligands

Ligand | Description
--- | ---
1 x TTT | 5-AMINO-2-METHYL-N-[(1R)-1-NAPHTHALEN-1-YLETHYL]BENZAMIDE
1 x ZN | ZINC ION

### Excluded ligands

Ligand Name.Number | Reason for Exclusion | Description
--- | --- | ---
CL.3 | Not biologically relevant. | CHLORIDE ION
CL.4 | Not biologically relevant. | CHLORIDE ION

    Target    APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLD
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    EWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEED
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    WLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTA
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    VVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLN
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    LEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYT
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    SNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF
    3e9s.1.A  -------------------------EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTF

    Target    YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA
    3e9s.1.A  FVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQLEVKFNAPALQEA

    Target    YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ
    3e9s.1.A  YYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDN

    Target    FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE
    3e9s.1.A  LKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSE

    Target    YKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFA
    3e9s.1.A  YKGPVTDVFYKETSYTTTIK------------------------------------------------------------

    Target    DDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKP
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    VETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAA
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    YVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQ
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    LCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLG
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    MPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFF
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    YVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRA
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    TRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKN
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    GSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVS
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    DVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLS
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    HQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNL
    3e9s.1.A  --------------------------------------------------------------------------------

    Target    PFKLTCATTRQVVNVVTTKIALKGG
    3e9s.1.A  -------------------------

### Model #09 | File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global
--- | --- | --- | --- | --- | --- | ---
| PDB | ProMod3 3.3.0 | monomer | 1 x TTT: 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide; 1 x ZN: ZINC ION; | 0.14 | 0.79 ± 0.05

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | --- | ---
7cmd.4.A | 100.00 | monomer | 0.00 | HHblits | X-ray | 2.59Å | 0.63 | 746 - 1060 | 0.16 | Non-structural protein 3

### Included Ligands

Ligand | Description
--- | ---
1 x TTT | 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide
1 x ZN | ZINC ION

### Excluded ligands

Ligand Name.Number | Reason for Exclusion | Description
--- | --- | ---
ZN.3 | Not in contact with model. | ZINC ION

    Target    APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLD
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    EWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEED
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    WLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTA
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    VVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLN
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    LEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYT
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    SNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF
    7cmd.4.A  -------------------------EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF

    Target    YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA
    7cmd.4.A  YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA

    Target    YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ
    7cmd.4.A  YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ

    Target    FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE
    7cmd.4.A  FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE

    Target    YKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFA
    7cmd.4.A  YKGPITDVFYKENSYTTTIKPVT---------------------------------------------------------

    Target    DDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKP
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    VETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAA
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    YVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQ
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    LCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLG
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    MPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFF
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    YVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRA
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    TRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKN
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    GSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVS
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    DVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLS
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    HQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNL
    7cmd.4.A  --------------------------------------------------------------------------------

    Target    PFKLTCATTRQVVNVVTTKIALKGG
    7cmd.4.A  -------------------------

### Model #08 | File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global
--- | --- | --- | --- | --- | --- | ---
| PDB | ProMod3 3.3.0 | monomer (matching prediction) | None | 0.13 | 0.79 ± 0.05

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | --- | ---
2w2g.1.A | 75.00 | homo-dimer | 0.21 | BLAST | X-ray | 2.22Å | 0.53 | 413 - 676 | 0.14 | NON-STRUCTURAL PROTEIN 3

### Excluded ligands

Ligand Name.Number | Reason for Exclusion | Description
--- | --- | ---
SO4.1 | Not biologically relevant. | SULFATE ION
SO4.2 | Not biologically relevant. | SULFATE ION

    Target    APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLD
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    EWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEED
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    WLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTA
    2w2g.1.A  ------------KIKACIDEVTTTLEETKFLTNKLLLFADINGKLYHDSQNMLRGEDMSFLEKDAPYMVGDVITSGDITC

    Target    VVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
    2w2g.1.A  VVIPSKKAGGTTEMLSRALKKVPVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSEAPNAKEEILGTVSWNLREM

    Target    LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLN
    2w2g.1.A  LAHAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTMPIGYVTHGFN

    Target    LEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYT
    2w2g.1.A  LEEAARCMRSLRAPAVVSVSSPDAVTTYNGYLTSSS--------------------------------------------

    Target    SNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    YKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFA
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    DDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKP
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    VETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAA
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    YVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQ
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    LCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLG
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    MPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFF
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    YVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRA
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    TRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKN
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    GSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVS
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    DVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLS
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    HQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNL
    2w2g.1.A  --------------------------------------------------------------------------------

    Target    PFKLTCATTRQVVNVVTTKIALKGG
    2w2g.1.A  -------------------------

### Model #05 | File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global
--- | --- | --- | --- | --- | --- | ---
| PDB | ProMod3 3.3.0 | monomer | None | 0.09 | 0.84 ± 0.07

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | --- | ---
6ywk.3.A | 100.00 | monomer | 0.00 | BLAST | X-ray | 2.20Å | 0.61 | 207 - 376 | 0.09 | NSP3 macrodomain

### Excluded ligands

Ligand Name.Number | Reason for Exclusion | Description
--- | --- | ---
EDO.3 | Not biologically relevant. | 1,2-ETHANEDIOL
EDO.4 | Not biologically relevant. | 1,2-ETHANEDIOL
EDO.5 | Not biologically relevant. | 1,2-ETHANEDIOL
EDO.6 | Not biologically relevant. | 1,2-ETHANEDIOL
EDO.7 | Not biologically relevant. | 1,2-ETHANEDIOL
EDO.8 | Not biologically relevant. | 1,2-ETHANEDIOL
EPE.2 | Not biologically relevant. | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
MG.1 | Binding site not conserved. | MAGNESIUM ION

    Target    APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLD
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    EWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEED
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    WLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV
    6ywk.3.A  ----------------------------------------------VNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV

    Target    NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF
    6ywk.3.A  NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF

    Target    NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
    6ywk.3.A  NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMK------------------------

    Target    KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTA
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    VVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLN
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    LEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYT
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    SNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    YKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFA
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    DDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKP
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    VETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAA
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    YVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQ
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    LCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLG
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    MPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFF
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    YVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRA
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    TRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKN
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    GSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVS
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    DVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLS
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    HQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNL
    6ywk.3.A  --------------------------------------------------------------------------------

    Target    PFKLTCATTRQVVNVVTTKIALKGG
    6ywk.3.A  -------------------------

### Model #06 | File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global
--- | --- | --- | --- | --- | --- | ---
| PDB | ProMod3 3.3.0 | monomer | None | 0.07 | 0.75 ± 0.07

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | --- | ---
2kqv.1.A | 78.13 | monomer | 0.00 | HHblits | NMR | - | 0.55 | 551 - 675 | 0.10 | Non-structural protein 3

### The template contained no ligands.

    Target    APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLD
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    EWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEED
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    WLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTA
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    VVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
    2kqv.1.A  ----------------------------------------------------------------------GTVSWNLREM

    Target    LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLN
    2kqv.1.A  LAHAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTMPIGYVTHGFN

    Target    LEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYT
    2kqv.1.A  LEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHFVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT

    Target    SNP-TTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKT
    2kqv.1.A  LESPVEFHLDGEVLSLDKLKSLL---------------------------------------------------------

    Target    FYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQD
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    AYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYE
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    QFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSS
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    EYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKF
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    ADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTK
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    PVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMA
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    AYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLL
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    QLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNL
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    GMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRF
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    FYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNR
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    ATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVK
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    NGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALV
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    SDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKL
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    SHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNN
    2kqv.1.A  --------------------------------------------------------------------------------

    Target    LPFKLTCATTRQVVNVVTTKIALKGG
    2kqv.1.A  --------------------------

### Model #04 | File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global
--- | --- | --- | --- | --- | --- | ---
| PDB | ProMod3 3.3.0 | monomer | None | 0.05 | 0.69 ± 0.08

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | --- | ---
2k87.1.A | 81.74 | monomer | 0.00 | BLAST | NMR | - | 0.58 | 1089 - 1203 | 0.06 | Non-structural protein 3 of Replicase polyprotein 1a

### The template contained no ligands.

    Target    APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLD
    2k87.1.A  --------------------------------------------------------------------------------

    Target    EWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEED
    2k87.1.A  --------------------------------------------------------------------------------

    Target    WLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV
    2k87.1.A  --------------------------------------------------------------------------------

    Target    NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF
    2k87.1.A  --------------------------------------------------------------------------------

    Target    NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
    2k87.1.A  --------------------------------------------------------------------------------

    Target    KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTA
    2k87.1.A  --------------------------------------------------------------------------------

    Target    VVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
    2k87.1.A  --------------------------------------------------------------------------------

    Target    LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLN
    2k87.1.A  --------------------------------------------------------------------------------

    Target    LEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYT
    2k87.1.A  --------------------------------------------------------------------------------

    Target    SNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF
    2k87.1.A  --------------------------------------------------------------------------------

    Target    YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDA
    2k87.1.A  --------------------------------------------------------------------------------

    Target    YYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQ
    2k87.1.A  --------------------------------------------------------------------------------

    Target    FKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSE
    2k87.1.A  --------------------------------------------------------------------------------

    Target    YKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFA
    2k87.1.A  ------------------------------------------------YTEQPIDLVPTQPLPNASFDNFKLTCSNTKFA

    Target    DDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKP
    2k87.1.A  DDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKP

    Target    VETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAA
    2k87.1.A  VDT-----------------------------------------------------------------------------

    Target    YVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQ
    2k87.1.A  --------------------------------------------------------------------------------

    Target    LCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLG
    2k87.1.A  --------------------------------------------------------------------------------

    Target    MPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFF
    2k87.1.A  --------------------------------------------------------------------------------

    Target    YVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRA
    2k87.1.A  --------------------------------------------------------------------------------

    Target    TRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKN
    2k87.1.A  --------------------------------------------------------------------------------

    Target    GSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVS
    2k87.1.A  --------------------------------------------------------------------------------

    Target    DVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLS
    2k87.1.A  --------------------------------------------------------------------------------

    Target    HQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNL
    2k87.1.A  --------------------------------------------------------------------------------

    Target    PFKLTCATTRQVVNVVTTKIALKGG
    2k87.1.A  -------------------------

### Model #03 | File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global
--- | --- | --- | --- | --- | --- | ---
| PDB | ProMod3 3.3.0 | monomer | None | 0.05 | 0.71 ± 0.11

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | --- | ---
2kqw.1.A | 80.22 | monomer | 0.00 | BLAST | NMR | - | 0.55 | 678 - 732 | 0.09 | Non-structural protein 3

### The template contained no ligands.

    Target    APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLD
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    EWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEED
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    WLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVV
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    NAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENF
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    NQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTA
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    VVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
    2kqw.1.A  ----------------------------------------------------------------------GTVSWNLREM

    Target    LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLN
    2kqw.1.A  LAHAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTMPIGYVTHGFN

    Target    LEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYT
    2kqw.1.A  LEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHFVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT

    Target    -SNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKT
    2kqw.1.A  LESPVEFHLDGEV-------------------------------------------------------------------

    Target    FYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQD
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    AYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYE
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    QFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSS
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    EYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKF
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    ADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTK
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    PVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMA
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    AYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLL
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    QLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNL
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    GMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRF
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    FYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNR
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    ATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVK
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    NGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALV
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    SDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKL
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    SHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNN
    2kqw.1.A  --------------------------------------------------------------------------------

    Target    LPFKLTCATTRQVVNVVTTKIALKGG
    2kqw.1.A  --------------------------

## Materials and Methods

## Template Search

Template search with has been performed against the SWISS-MODEL template library (SMTL, last update: 2023-05-05, last included PDB release: 2023-04-28).

## Model Building

Models are built based on the target-template alignment using ProMod3 (Studer et al.). Coordinates which are conserved between the target and the template are copied from the template to the model. Insertions and deletions are remodelled using a fragment library. Side chains are then rebuilt. Finally, the geometry of the resulting model is regularized by using a force field.

## Model Quality Estimation

The global and per-residue model quality has been assessed using the QMEAN scoring function (Studer et al.).

## Ligand Modelling

Ligands present in the template structure are transferred by homology to the model when the following criteria are met: (a) The ligands are annotated as biologically relevant in the template library, (b) the ligand is in contact with the model, (c) the ligand is not clashing with the protein, (d) the residues in contact with the ligand are conserved between the target and the template. If any of these four criteria is not satisfied, a certain ligand will not be included in the model. The model summary includes information on why and which ligand has not been included.

## Oligomeric State Conservation

The quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. The method (Bertoni et al.) is based on a supervised machine learning algorithm, Support Vector Machines (SVM), which combines interface conservation, structural clustering, and other template features to provide a quaternary structure quality estimate (QSQE). The QSQE score is a number between 0 and 1, reflecting the expected accuracy of the interchain contacts for a model built based a given alignment and template. Higher numbers indicate higher reliability. This complements the GMQE score which estimates the accuracy of the tertiary structure of the resulting model.

## References

- BLAST
  Camacho, C., Coulouris, G., Avagyan, V., Ma, N., Papadopoulos, J., Bealer, K., Madden, T.L. BLAST+: architecture and applications. BMC Bioinformatics 10, 421-430 (2009).
- HHblits
  Steinegger, M., Meier, M., Mirdita, M., Vöhringer, H., Haunsberger, S. J., Söding, J. HH-suite3 for fast remote homology detection and deep protein annotation. BMC Bioinformatics 20, 473 (2019).

## Table T1:

Primary amino acid sequence for which templates were searched and models were built.

APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDESGEFKLAS
HMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTP
VVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVV
GPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVIPTKKAGGTTEMLAKALR
KVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREMLAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDY
GARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLNLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSG
QSTQLGIEFLKRGDKSVYYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTF
YVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYC
NKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKH
GTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQ
PYPNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKP
VETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLG
LKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYL
KSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDL
TAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRA
TRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSL
SHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEA
ELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDF
MSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGG

## Table T2:

Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Coverage | Description
--- | --- | --- | --- | --- | --- | --- | --- | --- | ---
6wuu.4.A | 99.69 | monomer | - | BLAST | X-ray | 2.79Å | 0.62 | 0.16 | Non-structural protein 3
6wuu.1.A | 99.69 | monomer | - | BLAST | X-ray | 2.79Å | 0.62 | 0.16 | Non-structural protein 3
6wuu.2.A | 99.69 | monomer | - | BLAST | X-ray | 2.79Å | 0.62 | 0.16 | Non-structural protein 3
7cmd.2.A | 100.00 | monomer | - | HHblits | X-ray | 2.59Å | 0.63 | 0.16 | Non-structural protein 3
6w9c.1.A | 100.00 | homo-trimer | 0.26 | HHblits | X-ray | 2.70Å | 0.63 | 0.16 | Non-structural protein 3
8eua.1.A | 99.69 | monomer | - | BLAST | X-ray | 3.10Å | 0.62 | 0.16 | Papain-like protease nsp3
7cmd.4.A | 100.00 | monomer | - | HHblits | X-ray | 2.59Å | 0.63 | 0.16 | Non-structural protein 3
7cmd.1.A | 100.00 | monomer | - | HHblits | X-ray | 2.59Å | 0.63 | 0.16 | Non-structural protein 3
7cmd.3.A | 100.00 | monomer | - | HHblits | X-ray | 2.59Å | 0.63 | 0.16 | Non-structural protein 3
5e6j.1.A | 82.91 | monomer | - | HHblits | X-ray | 2.85Å | 0.57 | 0.16 | Replicase polyprotein 1ab
7lfu.1.A | 82.91 | monomer | - | HHblits | X-ray | 2.29Å | 0.57 | 0.16 | papain-like protease
3e9s.1.A | 82.86 | monomer | - | HHblits | X-ray | 2.50Å | 0.57 | 0.16 | Non-structural protein 3
3e9s.1.A | 82.86 | monomer | - | BLAST | X-ray | 2.50Å | 0.57 | 0.16 | Non-structural protein 3
7lfv.2.A | 82.91 | monomer | - | HHblits | X-ray | 2.23Å | 0.57 | 0.16 | papain-like protease
5e6j.2.A | 82.91 | monomer | - | HHblits | X-ray | 2.85Å | 0.57 | 0.16 | Replicase polyprotein 1ab
7lfv.1.A | 82.91 | monomer | - | HHblits | X-ray | 2.23Å | 0.57 | 0.16 | papain-like protease
3mj5.1.A | 82.86 | monomer | - | HHblits | X-ray | 2.63Å | 0.57 | 0.16 | Replicase polyprotein 1a
8f2e.1.A | 100.00 | monomer | - | HHblits | X-ray | 2.43Å | 0.61 | 0.15 | Papain-like protease nsp3
4m0w.1.A | 82.39 | monomer | - | HHblits | X-ray | 1.40Å | 0.56 | 0.16 | Replicase polyprotein 1a
2w2g.1.A | 75.00 | homo-dimer | 0.21 | BLAST | X-ray | 2.22Å | 0.53 | 0.14 | NON-STRUCTURAL PROTEIN 3
2wct.1.A | 75.00 | homo-dimer | 0.19 | BLAST | X-ray | 2.79Å | 0.53 | 0.14 | NON-STRUCTURAL PROTEIN 3
2w2g.1.A | 74.90 | homo-dimer | 0.21 | HHblits | X-ray | 2.22Å | 0.53 | 0.14 | NON-STRUCTURAL PROTEIN 3
2wct.1.A | 74.90 | homo-dimer | 0.19 | HHblits | X-ray | 2.79Å | 0.53 | 0.14 | NON-STRUCTURAL PROTEIN 3
2w2g.1.B | 75.00 | homo-dimer | 0.21 | BLAST | X-ray | 2.22Å | 0.53 | 0.14 | NON-STRUCTURAL PROTEIN 3
2w2g.1.B | 74.90 | homo-dimer | 0.20 | HHblits | X-ray | 2.22Å | 0.53 | 0.14 | NON-STRUCTURAL PROTEIN 3
6ywk.4.A | 100.00 | monomer | - | BLAST | X-ray | 2.20Å | 0.61 | 0.09 | NSP3 macrodomain
6z5t.1.A | 100.00 | monomer | - | BLAST | X-ray | 1.57Å | 0.61 | 0.09 | Replicase polyprotein 1ab
6ywk.3.A | 100.00 | monomer | - | BLAST | X-ray | 2.20Å | 0.61 | 0.09 | NSP3 macrodomain
2acf.4.A | 72.94 | monomer | - | HHblits | X-ray | 1.40Å | 0.52 | 0.09 | Replicase polyprotein 1ab
2acf.4.A | 73.37 | monomer | - | BLAST | X-ray | 1.40Å | 0.52 | 0.09 | Replicase polyprotein 1ab
6ywk.1.A | 100.00 | monomer | - | BLAST | X-ray | 2.20Å | 0.61 | 0.09 | NSP3 macrodomain
7jme.1.A | 100.00 | monomer | - | BLAST | X-ray | 1.55Å | 0.61 | 0.09 | Non-structural protein 3
7c33.1.A | 100.00 | monomer | - | BLAST | X-ray | 3.83Å | 0.61 | 0.09 | Non-structural protein 3
2acf.2.A | 72.94 | monomer | - | HHblits | X-ray | 1.40Å | 0.52 | 0.09 | Replicase polyprotein 1ab
6wey.1.A | 100.00 | monomer | - | BLAST | X-ray | 0.95Å | 0.61 | 0.09 | Non-structural protein 3
2acf.2.A | 73.37 | monomer | - | BLAST | X-ray | 1.40Å | 0.52 | 0.09 | Replicase polyprotein 1ab
6woj.1.A | 100.00 | monomer | - | BLAST | X-ray | 2.20Å | 0.61 | 0.09 | Non-structural protein 3
2fav.2.A | 73.81 | monomer | - | BLAST | X-ray | 1.80Å | 0.53 | 0.09 | Replicase polyprotein 1ab (pp1ab) (ORF1AB)
2fav.1.A | 73.81 | monomer | - | BLAST | X-ray | 1.80Å | 0.53 | 0.09 | Replicase polyprotein 1ab (pp1ab) (ORF1AB)
2acf.1.A | 73.37 | monomer | - | BLAST | X-ray | 1.40Å | 0.52 | 0.09 | Replicase polyprotein 1ab
2acf.1.A | 72.94 | monomer | - | HHblits | X-ray | 1.40Å | 0.52 | 0.09 | Replicase polyprotein 1ab
7xc4.1.B | 100.00 | homo-dimer | 0.24 | HHblits | X-ray | 2.10Å | 0.60 | 0.06 | Papain-like protease nsp3
7xc3.1.B | 100.00 | homo-dimer | 0.25 | HHblits | X-ray | 1.70Å | 0.61 | 0.06 | Papain-like protease nsp3
7xc4.1.A | 100.00 | homo-dimer | 0.25 | BLAST | X-ray | 2.10Å | 0.60 | 0.06 | Papain-like protease nsp3
7xc4.1.A | 100.00 | homo-dimer | 0.24 | HHblits | X-ray | 2.10Å | 0.60 | 0.06 | Papain-like protease nsp3
7xc3.1.A | 100.00 | homo-dimer | 0.25 | HHblits | X-ray | 1.70Å | 0.61 | 0.06 | Papain-like protease nsp3
2kqv.1.A | 78.13 | monomer | - | HHblits | NMR | NA | 0.55 | 0.10 | Non-structural protein 3
7lgo.2.A | 100.00 | monomer | - | BLAST | X-ray | 2.45Å | 0.64 | 0.06 | Non-structural protein 3
7lgo.2.A | 100.00 | monomer | - | HHblits | X-ray | 2.45Å | 0.64 | 0.06 | Non-structural protein 3
7lgo.1.A | 100.00 | monomer | - | BLAST | X-ray | 2.45Å | 0.64 | 0.06 | Non-structural protein 3
7lgo.1.A | 100.00 | monomer | - | HHblits | X-ray | 2.45Å | 0.64 | 0.06 | Non-structural protein 3
2k87.1.A | 81.74 | monomer | - | BLAST | NMR | NA | 0.58 | 0.06 | Non-structural protein 3 of Replicase polyprotein 1a
2kqw.1.A | 78.13 | monomer | - | HHblits | NMR | NA | 0.55 | 0.10 | Non-structural protein 3
2kqw.1.A | 80.22 | monomer | - | BLAST | NMR | NA | 0.55 | 0.09 | Non-structural protein 3

The table above shows the top 54 filtered templates. A further 1,299 templates were found which were considered to be less suitable for modelling than the filtered list.
1hjz.2.A, 1njr.1.A, 1qmy.1.A, 1qol.3.A, 1qol.3.B, 1spv.1.A, 1txz.1.A, 1vhu.1.A, 1yd9.1.A, 1yd9.3.A, 1yd9.4.A, 1zr3.1.A, 1zr3.2.A, 1zr5.1.A, 2afc.1.A, 2dx6.1.A, 2eee.1.A, 2fav.1.A, 2fav.2.A, 2fav.3.A, 2fe8.1.A, 2fe8.2.A, 2fe8.3.A, 2fg1.1.A, 2fxk.2.A, 2gri.1.A, 2jqf.1.A, 2jqf.1.B, 2jqg.1.A, 2jzd.1.A, 2jzf.1.A, 2k87.1.A, 2kaf.1.A, 2kqv.1.A, 2l8r.1.A, 2lgr.1.A, 2m0a.1.A, 2vri.1.A, 2x47.1.A, 2xd7.1.A, 3ejf.1.A, 3ejg.1.A, 3eke.1.A, 3eti.1.A, 3ew5.1.A, 3ew5.2.A, 3ewo.1.A, 3ewo.1.B, 3ewr.1.A, 3gpo.1.A, 3gpq.4.A, 3gqe.1.A, 3gqe.2.A, 3gqo.3.A, 3gqo.4.A, 3iid.1.A, 3iif.1.A, 3iif.2.A, 3iif.3.A, 3j8h.1.A, 3jzt.1.A, 3mp2.1.A, 3q6z.1.A, 3q71.1.A, 3sih.1.A, 3sij.1.A, 3v2b.1.A, 3v45.1.A, 3vfq.1.A, 4abk.1.A, 4ess.1.A, 4etj.1.A, 4etk.1.A, 4etk.2.A, 4gua.1.A, 4gvv.1.A, 4gvv.2.A, 4gvv.3.A, 4gvw.1.A, 4iqy.1.A, 4j4z.1.A, 4j5q.1.A, 4j5r.1.A, 4j5s.1.A, 4jca.2.A, 4jgk.1.A, 4jgk.3.A, 4jll.1.A, 4jvv.1.A, 4k0c.1.A, 4k0c.2.A, 4kyb.1.A, 4kyb.2.A, 4mm3.1.B, 4ovz.1.A, 4ovz.2.A, 4ow0.1.A, 4p16.1.A, 4pt5.1.A, 4r3d.1.A, 4rez.1.A, 4rf0.1.A, 4rna.1.A, 4tu0.3.A, 4uml.1.A, 4wur.1.A, 4x2z.1.A, 4ypt.1.A, 5ail.1.A, 5bz0.1.A, 5cb3.1.A, 5cb5.1.A, 5cms.1.A, 5dus.1.A, 5e3b.1.A, 5fsu.1.A, 5fsu.2.A, 5fsz.1.A, 5fud.1.A, 5gky.1.E, 5gkz.1.G, 5gl0.1.A, 5gl1.1.A, 5hih.1.A, 5iit.1.A, 5iq5.1.A, 5isn.1.A, 5j8v.1.D, 5kiv.1.A, 5ko3.1.A, 5l9k.1.A, 5lau.1.A, 5lbp.1.A, 5lcc.1.A, 5lcc.2.A, 5lnc.1.A, 5lnc.2.A, 5lw0.1.A, 5lw6.1.A, 5m31.1.A, 5m3e.1.A, 5m3i.1.A, 5mqx.1.A, 5o2d.1.A, 5rs7.1.A, 5rs7.2.A, 5rs8.1.A, 5rs8.2.A, 5rs9.1.A, 5rs9.2.A, 5rsb.1.A, 5rsb.2.A, 5rsc.1.A, 5rsc.2.A, 5rsd.1.A, 5rsd.2.A, 5rse.1.A, 5rse.2.A, 5rsf.1.A, 5rsf.2.A, 5rsg.1.A, 5rsg.2.A, 5rsh.1.A, 5rsh.2.A, 5rsi.1.A, 5rsi.2.A, 5rsj.1.A, 5rsj.2.A, 5rsk.1.A, 5rsk.2.A, 5rsl.1.A, 5rsl.2.A, 5rsm.1.A, 5rsm.2.A, 5rsn.1.A, 5rsn.2.A, 5rso.1.A, 5rso.2.A, 5rsp.1.A, 5rsp.2.A, 5rsq.1.A, 5rsq.2.A, 5rsr.1.A, 5rsr.2.A, 5rss.1.A, 5rss.2.A, 5rst.1.A, 5rst.2.A, 5rsu.1.A, 5rsu.2.A, 5rsv.1.A, 5rsv.2.A, 5rsw.1.A, 5rsw.2.A, 5rsx.1.A, 5rsx.2.A, 5rsy.1.A, 5rsy.2.A, 5rsz.1.A, 5rsz.2.A, 5rt0.1.A, 5rt0.2.A, 5rt1.1.A, 5rt1.2.A, 5rt2.1.A, 5rt2.2.A, 5rt3.1.A, 5rt3.2.A, 5rt4.1.A, 5rt4.2.A, 5rt5.1.A, 5rt5.2.A, 5rt6.1.A, 5rt6.2.A, 5rt7.1.A, 5rt7.2.A, 5rt8.1.A, 5rt8.2.A, 5rt9.1.A, 5rt9.2.A, 5rta.1.A, 5rta.2.A, 5rtb.1.A, 5rtb.2.A, 5rtc.1.A, 5rtc.2.A, 5rtd.1.A, 5rtd.2.A, 5rte.1.A, 5rte.2.A, 5rtf.1.A, 5rtf.2.A, 5rtg.1.A, 5rtg.2.A, 5rth.1.A, 5rth.2.A, 5rti.1.A, 5rti.2.A, 5rtj.1.A, 5rtj.2.A, 5rtk.1.A, 5rtk.2.A, 5rtl.1.A, 5rtl.2.A, 5rtm.1.A, 5rtm.2.A, 5rtn.1.A, 5rtn.2.A, 5rto.1.A, 5rto.2.A, 5rtp.1.A, 5rtp.2.A, 5rtq.1.A, 5rtq.2.A, 5rtr.1.A, 5rtr.2.A, 5rts.1.A, 5rts.2.A, 5rtt.1.A, 5rtt.2.A, 5rtu.1.A, 5rtu.2.A, 5rtv.1.A, 5rtv.2.A, 5rtw.1.A, 5rtw.2.A, 5rtx.1.A, 5rtx.2.A, 5rty.1.A, 5rty.2.A, 5rtz.1.A, 5rtz.2.A, 5ru0.1.A, 5ru0.2.A, 5ru1.1.A, 5ru1.2.A, 5ru2.1.A, 5ru2.2.A, 5ru3.1.A, 5ru3.2.A, 5ru4.1.A, 5ru4.2.A, 5ru5.1.A, 5ru5.2.A, 5ru6.1.A, 5ru6.2.A, 5ru7.1.A, 5ru7.2.A, 5ru8.1.A, 5ru8.2.A, 5ru9.1.A, 5ru9.2.A, 5rua.1.A, 5rua.2.A, 5ruc.1.A, 5ruc.2.A, 5rud.1.A, 5rud.2.A, 5rue.1.A, 5rue.2.A, 5ruf.1.A, 5ruf.2.A, 5rug.1.A, 5rug.2.A, 5ruh.1.A, 5ruh.2.A, 5rui.1.A, 5rui.2.A, 5ruj.1.A, 5ruj.2.A, 5ruk.1.A, 5ruk.2.A, 5rul.1.A, 5rul.2.A, 5rum.1.A, 5rum.2.A, 5run.1.A, 5run.2.A, 5ruo.1.A, 5ruo.2.A, 5rup.1.A, 5rup.2.A, 5ruq.1.A, 5ruq.2.A, 5rur.1.A, 5rur.2.A, 5rus.1.A, 5rus.2.A, 5rut.1.A, 5rut.2.A, 5ruu.1.A, 5ruu.2.A, 5ruv.1.A, 5ruv.2.A, 5ruw.1.A, 5ruw.2.A, 5rux.1.A, 5rux.2.A, 5ruy.1.A, 5ruy.2.A, 5ruz.1.A, 5ruz.2.A, 5rv0.1.A, 5rv0.2.A, 5rv1.1.A, 5rv1.2.A, 5rv2.1.A, 5rv2.2.A, 5rv3.1.A, 5rv3.2.A, 5rv4.1.A, 5rv4.2.A, 5rv5.1.A, 5rv5.2.A, 5rv6.1.A, 5rv6.2.A, 5rv7.1.A, 5rv7.2.A, 5rv8.1.A, 5rv8.2.A, 5rv9.1.A, 5rv9.2.A, 5rva.1.A, 5rva.2.A, 5rvb.1.A, 5rvb.2.A, 5rvc.1.A, 5rvc.2.A, 5rvd.1.A, 5rvd.2.A, 5rve.1.A, 5rve.2.A, 5rvf.1.A, 5rvf.2.A, 5rvg.1.A, 5rvg.2.A, 5rvh.1.A, 5rvh.2.A, 5rvi.1.A, 5rvi.2.A, 5rvj.1.A, 5rvk.1.A, 5rvl.1.A, 5rvm.1.A, 5rvn.1.A, 5rvo.1.A, 5rvp.1.A, 5rvq.1.A, 5rvr.1.A, 5rvs.1.A, 5rvt.1.A, 5rvu.1.A, 5rvv.1.A, 5s18.1.A, 5s18.2.A, 5s1a.1.A, 5s1a.2.A, 5s1c.1.A, 5s1c.2.A, 5s1e.1.A, 5s1e.2.A, 5s1g.1.A, 5s1g.2.A, 5s1i.1.A, 5s1i.2.A, 5s1k.1.A, 5s1k.2.A, 5s1m.1.A, 5s1m.2.A, 5s1o.1.A, 5s1o.2.A, 5s1q.1.A, 5s1q.2.A, 5s1s.1.A, 5s1s.2.A, 5s1u.1.A, 5s1u.2.A, 5s1w.1.A, 5s1w.2.A, 5s1y.1.A, 5s1y.2.A, 5s20.1.A, 5s20.2.A, 5s22.1.A, 5s22.2.A, 5s24.1.A, 5s24.2.A, 5s26.1.A, 5s26.2.A, 5s27.1.A, 5s27.2.A, 5s28.1.A, 5s28.2.A, 5s29.1.A, 5s29.2.A, 5s2a.1.A, 5s2a.2.A, 5s2b.1.A, 5s2b.2.A, 5s2c.1.A, 5s2c.2.A, 5s2d.1.A, 5s2d.2.A, 5s2e.1.A, 5s2e.2.A, 5s2f.1.A, 5s2f.2.A, 5s2g.1.A, 5s2g.2.A, 5s2h.1.A, 5s2h.2.A, 5s2i.1.A, 5s2i.2.A, 5s2j.1.A, 5s2j.2.A, 5s2k.1.A, 5s2k.2.A, 5s2l.1.A, 5s2l.2.A, 5s2m.1.A, 5s2m.2.A, 5s2n.1.A, 5s2n.2.A, 5s2o.1.A, 5s2o.2.A, 5s2p.1.A, 5s2p.2.A, 5s2q.1.A, 5s2q.2.A, 5s2r.1.A, 5s2r.2.A, 5s2s.1.A, 5s2s.2.A, 5s2t.1.A, 5s2t.2.A, 5s2u.1.A, 5s2u.2.A, 5s2v.1.A, 5s2v.2.A, 5s2w.1.A, 5s2w.2.A, 5s2x.1.A, 5s2x.2.A, 5s2y.1.A, 5s2y.2.A, 5s2z.1.A, 5s2z.2.A, 5s30.1.A, 5s30.2.A, 5s31.1.A, 5s31.2.A, 5s32.1.A, 5s32.2.A, 5s33.1.A, 5s33.2.A, 5s34.1.A, 5s34.2.A, 5s35.1.A, 5s35.2.A, 5s36.1.A, 5s36.2.A, 5s37.1.A, 5s37.2.A, 5s38.1.A, 5s38.2.A, 5s39.1.A, 5s39.2.A, 5s3a.1.A, 5s3a.2.A, 5s3b.1.A, 5s3b.2.A, 5s3c.1.A, 5s3c.2.A, 5s3d.1.A, 5s3d.2.A, 5s3e.1.A, 5s3e.2.A, 5s3f.1.A, 5s3f.2.A, 5s3g.1.A, 5s3g.2.A, 5s3h.1.A, 5s3h.2.A, 5s3i.1.A, 5s3i.2.A, 5s3j.1.A, 5s3j.2.A, 5s3k.1.A, 5s3k.2.A, 5s3l.1.A, 5s3l.2.A, 5s3m.1.A, 5s3m.2.A, 5s3n.1.A, 5s3n.2.A, 5s3o.1.A, 5s3o.2.A, 5s3p.1.A, 5s3p.2.A, 5s3q.1.A, 5s3q.2.A, 5s3r.1.A, 5s3r.2.A, 5s3s.1.A, 5s3s.2.A, 5s3t.1.A, 5s3t.2.A, 5s3u.1.A, 5s3u.2.A, 5s3v.1.A, 5s3v.2.A, 5s3w.1.A, 5s3w.2.A, 5s3x.1.A, 5s3x.2.A, 5s3y.1.A, 5s3y.2.A, 5s3z.1.A, 5s3z.2.A, 5s40.1.A, 5s40.2.A, 5s41.1.A, 5s41.2.A, 5s42.1.A, 5s42.2.A, 5s43.1.A, 5s43.2.A, 5s44.1.A, 5s44.2.A, 5s45.1.A, 5s45.2.A, 5s46.1.A, 5s46.2.A, 5s47.1.A, 5s47.2.A, 5s48.1.A, 5s48.2.A, 5s49.1.A, 5s49.2.A, 5s4a.1.A, 5s4a.2.A, 5s4b.1.A, 5s4b.2.A, 5s4c.1.A, 5s4c.2.A, 5s4d.1.A, 5s4d.2.A, 5s4e.1.A, 5s4e.2.A, 5s4f.1.A, 5s4f.2.A, 5s4g.1.A, 5s4g.2.A, 5s4h.1.A, 5s4h.2.A, 5s4i.1.A, 5s4i.2.A, 5s4j.1.A, 5s4j.2.A, 5s4k.1.A, 5s4k.2.A, 5s73.1.A, 5s73.2.A, 5s74.1.A, 5s74.2.A, 5soi.1.A, 5soi.2.A, 5soj.1.A, 5soj.2.A, 5sok.1.A, 5sok.2.A, 5sol.1.A, 5sol.2.A, 5som.1.A, 5som.2.A, 5son.1.A, 5son.2.A, 5soo.1.A, 5soo.2.A, 5sop.1.A, 5sop.2.A, 5soq.1.A, 5soq.2.A, 5sor.1.A, 5sor.2.A, 5sos.1.A, 5sos.2.A, 5sot.1.A, 5sot.2.A, 5sou.1.A, 5sou.2.A, 5sov.1.A, 5sov.2.A, 5sow.1.A, 5sow.2.A, 5sox.1.A, 5sox.2.A, 5soy.1.A, 5soy.2.A, 5soz.1.A, 5soz.2.A, 5sp0.1.A, 5sp0.2.A, 5sp1.1.A, 5sp1.2.A, 5sp2.1.A, 5sp2.2.A, 5sp3.1.A, 5sp3.2.A, 5sp4.1.A, 5sp4.2.A, 5sp6.1.A, 5sp6.2.A, 5sp7.1.A, 5sp7.2.A, 5sp8.1.A, 5sp8.2.A, 5sp9.1.A, 5sp9.2.A, 5spa.1.A, 5spa.2.A, 5spb.1.A, 5spb.2.A, 5spc.1.A, 5spc.2.A, 5spd.1.A, 5spd.2.A, 5spe.1.A, 5spe.2.A, 5spf.1.A, 5spf.2.A, 5spg.1.A, 5spg.2.A, 5sph.1.A, 5sph.2.A, 5spi.1.A, 5spi.2.A, 5spj.1.A, 5spj.2.A, 5spk.1.A, 5spk.2.A, 5spl.1.A, 5spl.2.A, 5spm.1.A, 5spm.2.A, 5spn.1.A, 5spn.2.A, 5spo.1.A, 5spo.2.A, 5spp.1.A, 5spp.2.A, 5spq.1.A, 5spq.2.A, 5spr.1.A, 5spr.2.A, 5sps.1.A, 5sps.2.A, 5spt.1.A, 5spt.2.A, 5spu.1.A, 5spu.2.A, 5spv.1.A, 5spv.2.A, 5spw.1.A, 5spw.2.A, 5spx.1.A, 5spx.2.A, 5spy.1.A, 5spy.2.A, 5spz.1.A, 5spz.2.A, 5sq0.1.A, 5sq0.2.A, 5sq1.1.A, 5sq1.2.A, 5sq2.1.A, 5sq2.2.A, 5sq3.1.A, 5sq3.2.A, 5sq4.1.A, 5sq4.2.A, 5sq5.1.A, 5sq5.2.A, 5sq6.1.A, 5sq6.2.A, 5sq7.1.A, 5sq7.2.A, 5sq8.1.A, 5sq8.2.A, 5sq9.1.A, 5sq9.2.A, 5sqa.1.A, 5sqa.2.A, 5sqb.1.A, 5sqb.2.A, 5sqc.1.A, 5sqc.2.A, 5sqd.1.A, 5sqd.2.A, 5sqe.1.A, 5sqe.2.A, 5sqf.1.A, 5sqf.2.A, 5sqg.1.A, 5sqg.2.A, 5sqh.1.A, 5sqh.2.A, 5sqi.1.A, 5sqi.2.A, 5sqj.1.A, 5sqj.2.A, 5sqk.1.A, 5sqk.2.A, 5sql.1.A, 5sql.2.A, 5sqm.1.A, 5sqm.2.A, 5sqn.1.A, 5sqn.2.A, 5sqo.1.A, 5sqo.2.A, 5sqp.1.A, 5sqp.2.A, 5sqq.1.A, 5sqq.2.A, 5sqr.1.A, 5sqr.2.A, 5sqs.1.A, 5sqs.2.A, 5sqt.1.A, 5sqt.2.A, 5squ.1.A, 5squ.2.A, 5sqv.1.A, 5sqv.2.A, 5sqw.1.A, 5sqw.2.A, 5sqx.1.A, 5sqx.2.A, 5sqy.1.A, 5sqy.2.A, 5sqz.1.A, 5sqz.2.A, 5sr0.1.A, 5sr0.2.A, 5sr1.1.A, 5sr1.2.A, 5sr2.1.A, 5sr2.2.A, 5sr3.1.A, 5sr3.2.A, 5sr4.1.A, 5sr4.2.A, 5sr5.1.A, 5sr5.2.A, 5sr6.1.A, 5sr6.2.A, 5sr7.1.A, 5sr7.2.A, 5sr8.1.A, 5sr8.2.A, 5sr9.1.A, 5sr9.2.A, 5sra.1.A, 5sra.2.A, 5srb.1.A, 5srb.2.A, 5src.1.A, 5src.2.A, 5srd.1.A, 5srd.2.A, 5sre.1.A, 5sre.2.A, 5srf.1.A, 5srf.2.A, 5srg.1.A, 5srg.2.A, 5srh.1.A, 5srh.2.A, 5sri.1.A, 5sri.2.A, 5srj.1.A, 5srj.2.A, 5srk.1.A, 5srk.2.A, 5srl.1.A, 5srl.2.A, 5srm.1.A, 5srm.2.A, 5srn.1.A, 5srn.2.A, 5sro.1.A, 5sro.2.A, 5srp.1.A, 5srp.2.A, 5srq.1.A, 5srq.2.A, 5srr.1.A, 5srr.2.A, 5srs.1.A, 5srs.2.A, 5srt.1.A, 5srt.2.A, 5sru.1.A, 5sru.2.A, 5srv.1.A, 5srv.2.A, 5srw.1.A, 5srw.2.A, 5srx.1.A, 5srx.2.A, 5sry.1.A, 5sry.2.A, 5srz.1.A, 5srz.2.A, 5ss0.1.A, 5ss0.2.A, 5ss1.1.A, 5ss1.2.A, 5ss2.1.A, 5ss2.2.A, 5ss3.1.A, 5ss3.2.A, 5ss4.1.A, 5ss4.2.A, 5ss5.1.A, 5ss5.2.A, 5ss6.1.A, 5ss6.2.A, 5ss7.1.A, 5ss7.2.A, 5ss8.1.A, 5ss8.2.A, 5ss9.1.A, 5ss9.2.A, 5ssa.1.A, 5ssa.2.A, 5ssb.1.A, 5ssb.2.A, 5ssc.1.A, 5ssc.2.A, 5ssd.1.A, 5ssd.2.A, 5sse.1.A, 5sse.2.A, 5ssf.1.A, 5ssf.2.A, 5ssg.1.A, 5ssg.2.A, 5ssh.1.A, 5ssh.2.A, 5ssi.1.A, 5ssi.2.A, 5ssj.1.A, 5ssj.2.A, 5ssk.1.A, 5ssk.2.A, 5ssl.1.A, 5ssl.2.A, 5ssm.1.A, 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