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Secondary Structure
None DSSP PSIPRED SSpro
Colour Scheme
Fade Mismatches Enhance Mismatches
Confidencegradient Confidenceclass Indels Chain Unique Chain Rainbow 2° Structure Clustal Hydrophobic Size Charged Polar Proline Ser/Thr Cysteine Aliphatic Aromatic No Colour
Use QMEANBrane values

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NGL PV

### Envelope small membrane protein (E) | P0DTC4

### Created: May 5, 2023, 9:34 p.m. at 21:34

Models | Name | Description | GMQE | QSQE | Seq Id | Coverage | Range | Method | Resolution | Oligo-state | Ligands | Found by | Seq Similarity
| 5x29.1.A | Envelope small membrane protein NMR structure of the SARS Coronavirus E protein pentameric ion channel | 0.51 | 0.44 | 91.38 | 0.77 | 8-65 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.55
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    5x29.1    -------ETGTLIVNSVLLFLAFVVFLLVTLAILTALRLAAYAANIVNVSLVKPTVYVYSRVKNL----------
| 2mm4.1.A | Envelope small membrane protein Structure of a Conserved Golgi Complex-targeting Signal in Coronavirus Envelope Proteins | 0.56 | 0.00 | 91.38 | 0.77 | 8-65 | NMR | 0.00 | monomer |  | HHblits | 0.55
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    2mm4.1    -------ETGTLIVNSVLLFLAFVVFLLVTLAILTALRLAAYAANIVNVSLVKPTVYVYSRVKNL----------
✓ | 5x29.1.A | Envelope small membrane protein NMR structure of the SARS Coronavirus E protein pentameric ion channel | 0.51 | 0.44 | 91.38 | 0.77 | 8-65 | NMR | 0.00 | homo-pentamer |  | BLAST | 0.55
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    5x29.1    -------ETGTLIVNSVLLFLAFVVFLLVTLAILTALRLAAYAANIVNVSLVKPTVYVYSRVKNL----------
| 7k3g.1.A | Envelope small membrane protein SARS-CoV-2 Envelope Protein Transmembrane Domain: Pentameric Structure Determined by Solid-State NMR | 0.17 | 0.45 | 100.00 | 0.41 | 8-38 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.57
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    7k3g.1    -------ETGTLIVNSVLLFLAFVVFLLVTLAILTALR-------------------------------------
✓ | 7k3g.1.B | Envelope small membrane protein SARS-CoV-2 Envelope Protein Transmembrane Domain: Pentameric Structure Determined by Solid-State NMR | 0.17 | 0.45 | 100.00 | 0.41 | 8-38 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.57
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    7k3g.1    -------ETGTLIVNSVLLFLAFVVFLLVTLAILTALR-------------------------------------
| 7k3g.1.C | Envelope small membrane protein SARS-CoV-2 Envelope Protein Transmembrane Domain: Pentameric Structure Determined by Solid-State NMR | 0.17 | 0.45 | 100.00 | 0.41 | 8-38 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.57
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    7k3g.1    -------ETGTLIVNSVLLFLAFVVFLLVTLAILTALR-------------------------------------
| 7k3g.1.D | Envelope small membrane protein SARS-CoV-2 Envelope Protein Transmembrane Domain: Pentameric Structure Determined by Solid-State NMR | 0.17 | 0.45 | 100.00 | 0.41 | 8-38 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.57
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    7k3g.1    -------ETGTLIVNSVLLFLAFVVFLLVTLAILTALR-------------------------------------
| 7k3g.1.E | Envelope small membrane protein SARS-CoV-2 Envelope Protein Transmembrane Domain: Pentameric Structure Determined by Solid-State NMR | 0.17 | 0.45 | 100.00 | 0.41 | 8-38 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.57
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    7k3g.1    -------ETGTLIVNSVLLFLAFVVFLLVTLAILTALR-------------------------------------
| 2hyn.1.A | Cardiac phospholamban Complete ensemble of NMR structures of unphosphorylated human phospholamban pentamer | 0.10 |  | 11.11 | 0.36 | 7-33 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.33
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    2hyn.1    ------QKLQNLFINFCLILICLLLICIIVMLL------------------------------------------
| 1zll.1.B | Cardiac phospholamban NMR Structure of Unphosphorylated Human Phospholamban Pentamer | 0.10 |  | 11.11 | 0.36 | 7-33 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.33
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    1zll.1    ------QKLQNLFINFCLILICLLLICIIVMLL------------------------------------------
| 1zll.1.C | Cardiac phospholamban NMR Structure of Unphosphorylated Human Phospholamban Pentamer | 0.10 |  | 11.11 | 0.36 | 7-33 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.33
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    1zll.1    ------QKLQNLFINFCLILICLLLICIIVMLL------------------------------------------
| 1zll.1.A | Cardiac phospholamban NMR Structure of Unphosphorylated Human Phospholamban Pentamer | 0.10 |  | 11.11 | 0.36 | 7-33 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.33
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    1zll.1    ------QKLQNLFINFCLILICLLLICIIVMLL------------------------------------------
| 1zll.1.E | Cardiac phospholamban NMR Structure of Unphosphorylated Human Phospholamban Pentamer | 0.10 |  | 11.11 | 0.36 | 7-33 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.33
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    1zll.1    ------QKLQNLFINFCLILICLLLICIIVMLL------------------------------------------
| 1zll.1.D | Cardiac phospholamban NMR Structure of Unphosphorylated Human Phospholamban Pentamer | 0.10 |  | 11.11 | 0.36 | 7-33 | NMR | 0.00 | homo-pentamer |  | HHblits | 0.33
    target    MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV
    1zll.1    ------QKLQNLFINFCLILICLLLICIIVMLL------------------------------------------