Export Alignment
Secondary Structure
None DSSP PSIPRED SSpro
Colour Scheme
Fade Mismatches Enhance Mismatches
Confidencegradient Confidenceclass Indels Chain Unique Chain Rainbow 2° Structure Clustal Hydrophobic Size Charged Polar Proline Ser/Thr Cysteine Aliphatic Aromatic No Colour
Use QMEANBrane values

Background |  |  |

3D Viewer
NGL PV

### Envelope small membrane protein (E) | P0DTC4

### Created: May 5, 2023, 9:34 p.m. at 21:34

Order by:

Oligo-State
  Homo-pentamer
  (requested by user)
GMQE
  0.39
QMEANDisCo Global:
  0.40 ± 0.05

Ligands

QMEANDisCo Local
QMEAN Z-Scores

Template
5x29.1.A Envelope small membrane protein
NMR structure of the SARS Coronavirus E protein pentameric ion channel

Seq Identity
  91.38%
Coverage

Biounit Oligo State | Homo-pentamer
QSQE | 0.44
Method | NMR
Seq Similarity | 0.55
Coverage | 0.77
Range | 8-65

Model-Template Alignment

Oligo-State
  Homo-pentamer
  (matching prediction)
GMQE
  0.20
QMEANDisCo Global:
  0.56 ± 0.07

Membrane annotation has been transferred from template.
  Show / Hide
Ligands

QMEANDisCo Local
QMEAN Z-Scores

Template
7k3g.1.A Envelope small membrane protein
SARS-CoV-2 Envelope Protein Transmembrane Domain: Pentameric Structure Determined by Solid-State NMR

Seq Identity
  100.00%
Coverage

Biounit Oligo State | Homo-pentamer
QSQE | 0.45
Method | NMR
Seq Similarity | 0.57
Coverage | 0.41
Range | 8-38

Model-Template Alignment

Click model image to view in 3D
Click model image to view in 3D

### Delete Model - ""

Are you sure you want to delete this model?
(This really can't be undone!)