Export Alignment
Secondary Structure
None DSSP PSIPRED SSpro
Colour Scheme
Fade Mismatches Enhance Mismatches
Confidencegradient Confidenceclass Indels Chain Unique Chain Rainbow 2° Structure Clustal Hydrophobic Size Charged Polar Proline Ser/Thr Cysteine Aliphatic Aromatic No Colour
Use QMEANBrane values

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NGL PV

### ORF8 protein (ORF8) | P0DTC8

### Created: May 5, 2023, 9:33 p.m. at 21:33

Order by:

Oligo-State
  Homo-dimer
  (matching prediction)
GMQE
  0.73
QMEANDisCo Global:
  0.80 ± 0.06

Ligands

QMEANDisCo Local
QMEAN Z-Scores

Template
7jx6.1.A ORF8 protein
STRUCTURE OF THE SARS-CoV-2 ORF8 ENCODED ACCESSORY PROTEIN

Seq Identity
  100.00%
Coverage

Biounit Oligo State | Homo-dimer
QSQE | 0.65
Method | X-ray, 1.61 Å
Seq Similarity | 0.63
Coverage | 0.86
Range | 18-121

Ligand | Added to Model | Description
--- | --- | ---
NA | ✕ - Not biologically relevant. | SODIUM ION
NA | ✕ - Not biologically relevant. | SODIUM ION
NA | ✕ - Not biologically relevant. | SODIUM ION
NA | ✕ - Not biologically relevant. | SODIUM ION

Model-Template Alignment

Oligo-State
  Homo-dimer
  (matching prediction)
GMQE
  0.72
QMEANDisCo Global:
  0.79 ± 0.06

Ligands

QMEANDisCo Local
QMEAN Z-Scores

Template
7jtl.1.A ORF8 protein
Structure of SARS-CoV-2 ORF8 accessory protein

Seq Identity
  100.00%
Coverage

Biounit Oligo State | Homo-dimer
QSQE | 0.69
Method | X-ray, 2.04 Å
Seq Similarity | 0.63
Coverage | 0.86
Range | 18-121

Ligand | Added to Model | Description
--- | --- | ---
NA | ✕ - Not biologically relevant. | SODIUM ION

Model-Template Alignment

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