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NGL PV

### Non-structural protein 7 (nsp7) | P0DTD1 PRO_0000449625

### Created: May 5, 2023, 9:33 p.m. at 21:33

Order by:

Oligo-State
  Monomer
  (matching prediction)
GMQE
  0.84
QMEANDisCo Global:
  0.79 ± 0.10

Ligands

QMEANDisCo Local
QMEAN Z-Scores

Template
7jlt.1.A Non-structural protein 7
Crystal Structure of SARS-CoV-2 NSP7-NSP8 complex.

Seq Identity
  100.00%
Coverage

Biounit Oligo State | Hetero-tetramer
QSQE | 0.75
Method | X-ray, 2.70 Å
Seq Similarity | 0.59
Coverage | 1.00
Range | 1-79

Model-Template Alignment

Oligo-State
  Monomer
  (matching prediction)
GMQE
  0.76
QMEANDisCo Global:
  0.75 ± 0.11

Ligands

QMEANDisCo Local
QMEAN Z-Scores

Template
2ahm.1.B Replicase polyprotein 1ab, light chain
Crystal structure of SARS-CoV super complex of non-structural proteins: the hexadecamer

Seq Identity
  98.80%
Coverage

Biounit Oligo State | Hetero-16-mer
QSQE | 0.59
Method | X-ray, 2.40 Å
Seq Similarity | 0.59
Coverage | 1.00
Range | 1-74

Ligand | Added to Model | Description
--- | --- | ---
GOL | ✕ - Not biologically relevant. | GLYCEROL
GOL | ✕ - Not biologically relevant. | GLYCEROL
GOL | ✕ - Not biologically relevant. | GLYCEROL
GOL | ✕ - Not biologically relevant. | GLYCEROL
GOL | ✕ - Not biologically relevant. | GLYCEROL
GOL | ✕ - Not biologically relevant. | GLYCEROL
GOL | ✕ - Not biologically relevant. | GLYCEROL
GOL | ✕ - Not biologically relevant. | GLYCEROL
GOL | ✕ - Not biologically relevant. | GLYCEROL
GOL | ✕ - Not biologically relevant. | GLYCEROL
SO4 | ✕ - Not biologically relevant. | SULFATE ION
SO4 | ✕ - Not biologically relevant. | SULFATE ION

Model-Template Alignment

Oligo-State
  Monomer
GMQE
  0.75
QMEANDisCo Global:
  0.80 ± 0.11

Ligands

QMEANDisCo Local
QMEAN Z-Scores

Template
6m71.1.B Non-structural protein 7
SARS-Cov-2 RNA-dependent RNA polymerase in complex with cofactors

Seq Identity
  100.00%
Coverage

Biounit Oligo State | Hetero-tetramer
QSQE | 0.00
Method | EM
Seq Similarity | 0.59
Coverage | 1.00
Range | 2-71

Model-Template Alignment

Oligo-State
  Monomer
GMQE
  0.53
QMEANDisCo Global:
  0.44 ± 0.09

Ligands

QMEANDisCo Local
QMEAN Z-Scores

Template
1ysy.1.A Replicase polyprotein 1ab (pp1ab) (ORF1AB)
NMR Structure of the nonstructural Protein 7 (nsP7) from the SARS CoronaVirus

Seq Identity
  98.80%
Coverage

Biounit Oligo State | Monomer
QSQE | 0.00
Method | NMR
Seq Similarity | 0.59
Coverage | 1.00
Range | 1-83

Model-Template Alignment

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