|
8dqu.1.C |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.66 |
0.65 |
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.G |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.66 |
0.65 |
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.W |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.66 |
0.65 |
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.K |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.66 |
0.65 |
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.O |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.66 |
0.65 |
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.S |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.66 |
0.65 |
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7bwq.1.B |
Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 |
0.84 |
0.92 |
100.00 |
1.00 |
1-113 |
X-ray |
2.95 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7bwq.1.A |
Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 |
0.87 |
0.92 |
100.00 |
1.00 |
1-113 |
X-ray |
2.95 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7bwq.2.B |
Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 |
0.85 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.95 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.2 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.2 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7bwq.2.A |
Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 |
0.84 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.95 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.2 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.2 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7bwq.3.A |
Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 |
0.84 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.95 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.3 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.3 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7thm.1.E |
Non-structural protein 9
SARS-CoV-2 nsp12/7/8 complex with a native N-terminus nsp9 |
0.60 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-1-2-1-1-mer |
2 x ZN, 1 x MN, 1 x POP |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7thm.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7thm.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8gwi.1.I |
Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors |
0.77 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-1-2-1-2-1-mer |
8 x ZN, 1 x GTP |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwi.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwi.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8gwn.1.I |
Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors |
0.77 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-1-2-1-2-1-mer |
8 x ZN, 1 x GNP |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwn.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwn.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7eiz.1.E |
Non-structural protein 9
Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading |
0.82 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-1-2-1-1-1-1-… |
13 x ZN, 1 x MG |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7eiz.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7eiz.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7bwq.3.B |
Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 |
0.87 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.95 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.3 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.3 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.P |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.62 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
hetero-12-12-mer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.T |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.62 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
hetero-12-12-mer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.D |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.62 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
hetero-12-12-mer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.H |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.62 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
hetero-12-12-mer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.L |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.62 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
hetero-12-12-mer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8dqu.1.X |
Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 |
0.62 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.45 |
hetero-12-12-mer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8gwo.1.I |
Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors |
0.81 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-1-2-1-2-1-mer |
8 x ZN, 1 x GNP |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwo.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwo.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
6wc1.1.A |
SARS-coV-2 Non-structural protein 9
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase |
0.89 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.40 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6wc1.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6wc1.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
6wxd.1.A |
Non-structural protein 9
SARS-CoV-2 Nsp9 RNA-replicase |
0.90 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.00 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6wxd.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6wxd.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
6wc1.1.B |
SARS-coV-2 Non-structural protein 9
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase |
0.89 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.40 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6wc1.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6wc1.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
6wxd.1.B |
Non-structural protein 9
SARS-CoV-2 Nsp9 RNA-replicase |
0.88 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.00 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6wxd.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6wxd.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8gwg.1.I |
Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors |
0.77 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-1-2-1-2-1-mer |
8 x ZN, 1 x GTP |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwg.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwg.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8gwf.1.I |
Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors |
0.77 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-1-2-1-2-1-mer |
8 x ZN, 1 x GTP |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwf.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwf.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8gwe.1.I |
Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors |
0.77 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-1-2-1-2-1-mer |
8 x ZN, 1 x GNP, 1 x MG, 1 x A-U-U-A |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwe.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwe.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
✓
|
6w4b.1.B |
Non-structural protein 9
The crystal structure of Nsp9 RNA binding protein of SARS CoV-2 |
0.88 |
0.94 |
100.00 |
1.00 |
1-113 |
X-ray |
2.95 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6w4b.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6w4b.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7cyq.1.I |
Non-structural protein 9
Cryo-EM structure of an extended SARS-CoV-2 replication and transcription complex reveals an intermediate state in cap synthesis |
0.83 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-1-2-1-2-1-mer |
8 x ZN, 1 x GDP, 1 x MG |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7cyq.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7cyq.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
6w4b.1.A |
Non-structural protein 9
The crystal structure of Nsp9 RNA binding protein of SARS CoV-2 |
0.88 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.95 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6w4b.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6w4b.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
8gwb.1.I |
Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors |
0.82 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-1-2-1-2-1-mer |
8 x ZN, 2 x MN, 1 x A-U |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwb.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwb.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7egq.1.F |
Non-structural protein 9
Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading |
0.83 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-2-4-2-4-2-2-… |
26 x ZN, 3 x MG |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7egq.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7egq.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7egq.1.N |
Non-structural protein 9
Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading |
0.82 |
|
100.00 |
1.00 |
1-113 |
EM |
0.00 |
hetero-2-4-2-4-2-2-… |
26 x ZN, 3 x MG |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7egq.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7egq.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
6w9q.1.A |
3C-like proteinase peptide, Non-structural protein 9 fusion
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase |
0.87 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.05 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6w9q.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6w9q.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
6w9q.1.B |
3C-like proteinase peptide, Non-structural protein 9 fusion
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase |
0.87 |
|
100.00 |
1.00 |
1-113 |
X-ray |
2.05 |
homo-dimer |
|
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6w9q.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6w9q.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7kri.1.C |
Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase |
0.87 |
|
100.00 |
1.00 |
1-113 |
X-ray |
1.58 |
homo-hexamer |
12 x X0Y |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7kri.1.F |
Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase |
0.87 |
|
100.00 |
1.00 |
1-113 |
X-ray |
1.58 |
homo-hexamer |
12 x X0Y |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7kri.1.E |
Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase |
0.89 |
|
100.00 |
1.00 |
1-113 |
X-ray |
1.58 |
homo-hexamer |
12 x X0Y |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7kri.1.B |
Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase |
0.89 |
|
100.00 |
1.00 |
1-113 |
X-ray |
1.58 |
homo-hexamer |
12 x X0Y |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7kri.1.D |
Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase |
0.86 |
|
100.00 |
1.00 |
1-113 |
X-ray |
1.58 |
homo-hexamer |
12 x X0Y |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7kri.1.A |
Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase |
0.86 |
|
100.00 |
1.00 |
1-113 |
X-ray |
1.58 |
homo-hexamer |
12 x X0Y |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7n3k.2.B |
Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 |
0.88 |
|
100.00 |
1.00 |
1-113 |
X-ray |
3.00 |
homo-dimer |
2 x ODN |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.2 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.2 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7n3k.4.B |
Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 |
0.88 |
|
100.00 |
1.00 |
1-113 |
X-ray |
3.00 |
homo-dimer |
2 x ODN |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.4 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.4 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7n3k.4.A |
Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 |
0.88 |
|
100.00 |
1.00 |
1-113 |
X-ray |
3.00 |
homo-dimer |
2 x ODN |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.4 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.4 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7n3k.2.A |
Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 |
0.88 |
|
100.00 |
1.00 |
1-113 |
X-ray |
3.00 |
homo-dimer |
2 x ODN |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.2 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.2 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7n3k.3.A |
Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 |
0.89 |
|
100.00 |
1.00 |
1-113 |
X-ray |
3.00 |
homo-dimer |
2 x ODN |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.3 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.3 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7n3k.1.A |
Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 |
0.89 |
|
100.00 |
1.00 |
1-113 |
X-ray |
3.00 |
homo-dimer |
2 x ODN |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7n3k.1.B |
Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 |
0.88 |
|
100.00 |
1.00 |
1-113 |
X-ray |
3.00 |
homo-dimer |
2 x ODN |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
7n3k.3.B |
Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 |
0.88 |
|
100.00 |
1.00 |
1-113 |
X-ray |
3.00 |
homo-dimer |
2 x ODN |
HHblits |
0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.3 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.3 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
1qz8.1.A |
polyprotein 1ab
Crystal structure of SARS coronavirus NSP9 |
0.88 |
|
97.35 |
1.00 |
1-113 |
X-ray |
2.70 |
homo-dimer |
|
HHblits |
0.61 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 1qz8.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1qz8.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
✓
|
1qz8.1.B |
polyprotein 1ab
Crystal structure of SARS coronavirus NSP9 |
0.87 |
0.92 |
97.35 |
1.00 |
1-113 |
X-ray |
2.70 |
homo-dimer |
|
HHblits |
0.61 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 1qz8.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1qz8.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
✓
|
1uw7.1.A |
NSP9
Nsp9 protein from SARS-coronavirus. |
0.85 |
0.91 |
97.35 |
1.00 |
1-113 |
X-ray |
2.80 |
homo-dimer |
|
HHblits |
0.61 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 1uw7.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1uw7.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
|
3ee7.1.B |
Replicase polyprotein 1a
Crystal Structure of SARS-CoV nsp9 G104E |
0.86 |
|
96.46 |
1.00 |
1-113 |
X-ray |
2.60 |
homo-dimer |
|
HHblits |
0.60 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 3ee7.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3ee7.1 KGPKVKYLYFIKGLNNLNRGMVLESLAATVRLQ
|
|
3ee7.1.A |
Replicase polyprotein 1a
Crystal Structure of SARS-CoV nsp9 G104E |
0.85 |
|
96.46 |
1.00 |
1-113 |
X-ray |
2.60 |
homo-dimer |
|
HHblits |
0.60 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 3ee7.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3ee7.1 KGPKVKYLYFIKGLNNLNRGMVLESLAATVRLQ
|
|
3ee7.2.B |
Replicase polyprotein 1a
Crystal Structure of SARS-CoV nsp9 G104E |
0.86 |
|
96.46 |
1.00 |
1-113 |
X-ray |
2.60 |
homo-dimer |
|
HHblits |
0.60 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 3ee7.2 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3ee7.2 KGPKVKYLYFIKGLNNLNRGMVLESLAATVRLQ
|
|
2j97.1.A |
REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 (Nsp9) |
0.61 |
|
45.87 |
0.96 |
1-113 |
X-ray |
1.75 |
homo-dimer |
|
BLAST |
0.43 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j97.1 NNEIMPGKMKVKATKGEGDGGITSEGNAL--YNNEGGRAFMYAYVTTKPGMKYVKWEHDSGVVTV--ELEPPCRFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j97.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
|
2j98.1.B |
REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) |
0.62 |
|
44.95 |
0.96 |
1-113 |
X-ray |
1.80 |
hetero-1-1-mer |
1 x DTT |
BLAST |
0.42 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j98.1 NNEIKPGKMKVKATKGEGDGGITSEGNAL--YNNEGGRAFMYAYVTTKPGMKYVKWEHDSGVVTV--ELEPPARFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j98.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
|
2j98.1.A |
REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) |
0.63 |
|
44.95 |
0.96 |
1-113 |
X-ray |
1.80 |
hetero-1-1-mer |
1 x DTT |
BLAST |
0.42 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j98.1 NNEIMPGKMKVKATKGEGDGGITSEGNAL--YNNEGGRAFMYAYVTTKPGMKYVKWEHDSGVVTV--ELEPPARFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j98.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
|
2j97.1.A |
REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 (Nsp9) |
0.68 |
|
44.04 |
0.96 |
1-113 |
X-ray |
1.75 |
homo-dimer |
|
HHblits |
0.42 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j97.1 NNEIMPGKMKVKATKGEGDG-GITS-EGNALYNNEGGRAFMYAYVTTKPGMKYVKWEHD--SGVVTVELEPPCRFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j97.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
|
2j98.1.B |
REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) |
0.67 |
|
43.12 |
0.96 |
1-113 |
X-ray |
1.80 |
hetero-1-1-mer |
1 x DTT |
HHblits |
0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j98.1 NNEIKPGKMKVKATKGEGDG-GITS-EGNALYNNEGGRAFMYAYVTTKPGMKYVKWEHD--SGVVTVELEPPARFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j98.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
|
2j98.1.A |
REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) |
0.70 |
|
43.12 |
0.96 |
1-113 |
X-ray |
1.80 |
hetero-1-1-mer |
1 x DTT |
HHblits |
0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j98.1 NNEIMPGKMKVKATKGEGDG-GITS-EGNALYNNEGGRAFMYAYVTTKPGMKYVKWEHD--SGVVTVELEPPARFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j98.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
|
5c94.1.A |
Non-structural protein 9
Infectious bronchitis virus nsp9 |
0.69 |
|
39.64 |
0.98 |
1-113 |
X-ray |
2.44 |
homo-dimer |
|
BLAST |
0.39 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5c94.1 NNELMPHGVKTKACVAGVDQAHCSVESK-CYYTSISGSSVVAAITSSNPNLKVASFLNEAGN-QIYVDLDPPCKFGMKVG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5c94.1 DKVEVVYLYFIKNTRSIVRGMVLGAISNVVVLQ
|
|
5c94.1.A |
Non-structural protein 9
Infectious bronchitis virus nsp9 |
0.70 |
|
39.64 |
0.98 |
1-113 |
X-ray |
2.44 |
homo-dimer |
|
HHblits |
0.39 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5c94.1 NNELMPHGVKTKACVAGVDQAHCSV-ESKCYYTSISGSSVVAAITSSNPNLKVASFLNEAGN-QIYVDLDPPCKFGMKVG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5c94.1 DKVEVVYLYFIKNTRSIVRGMVLGAISNVVVLQ
|
|
5hiy.2.A |
Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A |
0.61 |
|
45.37 |
0.96 |
1-113 |
X-ray |
3.00 |
homo-dimer |
|
BLAST |
0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.2 NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGANTI--ELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.2 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
|
5hiy.1.B |
Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A |
0.64 |
|
45.37 |
0.96 |
1-113 |
X-ray |
3.00 |
homo-dimer |
|
BLAST |
0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.1 NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGANTI--ELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
|
5hiy.1.A |
Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A |
0.62 |
|
45.37 |
0.96 |
1-113 |
X-ray |
3.00 |
homo-dimer |
|
BLAST |
0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.1 NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGANTI--ELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
|
5hiz.1.A |
Non-structural protein 9
The structure of PEDV NSP9 |
0.60 |
|
45.37 |
0.96 |
1-113 |
X-ray |
2.90 |
homo-dimer |
|
BLAST |
0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiz.1 NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGCNTI--ELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiz.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
|
5hiz.1.B |
Non-structural protein 9
The structure of PEDV NSP9 |
0.60 |
|
45.37 |
0.96 |
1-113 |
X-ray |
2.90 |
homo-dimer |
|
BLAST |
0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiz.1 NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGCNTI--ELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiz.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
|
5hiy.2.A |
Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A |
0.61 |
|
43.52 |
0.96 |
1-113 |
X-ray |
3.00 |
homo-dimer |
|
HHblits |
0.40 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.2 NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGANTIELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.2 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
|
5hiy.1.B |
Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A |
0.64 |
|
43.52 |
0.96 |
1-113 |
X-ray |
3.00 |
homo-dimer |
|
HHblits |
0.40 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.1 NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGANTIELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
|
5hiy.1.A |
Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A |
0.61 |
|
43.52 |
0.96 |
1-113 |
X-ray |
3.00 |
homo-dimer |
|
HHblits |
0.40 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.1 NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGANTIELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
|
5hiz.1.A |
Non-structural protein 9
The structure of PEDV NSP9 |
0.61 |
|
43.52 |
0.96 |
1-113 |
X-ray |
2.90 |
homo-dimer |
|
HHblits |
0.40 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiz.1 NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGCNTIELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiz.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
|
5hiz.1.B |
Non-structural protein 9
The structure of PEDV NSP9 |
0.60 |
|
43.52 |
0.96 |
1-113 |
X-ray |
2.90 |
homo-dimer |
|
HHblits |
0.40 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiz.1 NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGCNTIELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiz.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
|
5ym6.1.A |
nsp9
Crystal Structure of porcine delta coronavirus nsp9 |
0.51 |
|
36.11 |
0.96 |
1-113 |
X-ray |
1.80 |
homo-dimer |
|
BLAST |
0.38 |
target NNELSPVALRQMSCAAGTTQTACTDDNAL-AYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT 5ym6.1 NNEL---CLRNVFTAQNTAQDFNGNESTVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV
target PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym6.1 GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
|
5ym6.1.B |
nsp9
Crystal Structure of porcine delta coronavirus nsp9 |
0.54 |
|
36.11 |
0.96 |
1-113 |
X-ray |
1.80 |
homo-dimer |
|
BLAST |
0.38 |
target NNELSPVALRQMSCAAGTTQTACTDDNAL-AYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT 5ym6.1 NNEL---CLRNVFTAQNTAQDFNGNESTVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV
target PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym6.1 GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
|
5ym6.1.A |
nsp9
Crystal Structure of porcine delta coronavirus nsp9 |
0.57 |
|
32.41 |
0.96 |
1-113 |
X-ray |
1.80 |
homo-dimer |
|
HHblits |
0.35 |
target NNELSP-VALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT 5ym6.1 NNELCLRNVFTAQNTAQDFN-GNES--TVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV
target PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym6.1 GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
|
5ym6.1.B |
nsp9
Crystal Structure of porcine delta coronavirus nsp9 |
0.59 |
|
32.41 |
0.96 |
1-113 |
X-ray |
1.80 |
homo-dimer |
|
HHblits |
0.35 |
target NNELSP-VALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT 5ym6.1 NNELCLRNVFTAQNTAQDFN-GNES--TVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV
target PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym6.1 GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
|
5ym8.1.A |
nsp9
Crystal Structure of porcine delta coronavirus nsp9-N7 |
0.55 |
|
30.39 |
0.90 |
7-113 |
X-ray |
1.99 |
monomer |
|
HHblits |
0.35 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5ym8.1 ------NVFTAQNTAQDFN-GNES--TVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTVG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym8.1 GKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
|
5ym8.1.A |
nsp9
Crystal Structure of porcine delta coronavirus nsp9-N7 |
0.44 |
|
36.59 |
0.73 |
30-113 |
X-ray |
1.99 |
monomer |
|
BLAST |
0.38 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5ym8.1 -----------------------------SFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTVG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym8.1 GKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
|
2p5p.1.A |
Genome polyprotein
Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III |
0.09 |
|
19.51 |
0.36 |
62-109 |
X-ray |
2.80 |
monomer |
|
HHblits |
0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 2p5p.1 -------------------------------------------------------------NAKVLIELEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2p5p.1 GRGEQQINHHWH-------KSGSSIGKAFTT----
|
|
2p5p.2.A |
Genome polyprotein
Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III |
0.08 |
|
19.51 |
0.36 |
62-109 |
X-ray |
2.80 |
monomer |
|
HHblits |
0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 2p5p.2 -------------------------------------------------------------NAKVLIELEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2p5p.2 GRGEQQINHHWH-------KSGSSIGKAFTT----
|
|
2p5p.3.A |
Genome polyprotein
Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III |
0.08 |
|
19.51 |
0.36 |
62-109 |
X-ray |
2.80 |
monomer |
|
HHblits |
0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 2p5p.3 -------------------------------------------------------------NAKVLIELEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2p5p.3 GRGEQQINHHWH-------KSGSSIGKAFTT----
|
|
3uzv.1.A |
envelope protein
Crystal structure of the dengue virus serotype 2 envelope protein domain III in complex with the variable domains of Mab 4E11 |
0.07 |
|
21.62 |
0.33 |
62-105 |
X-ray |
2.10 |
hetero-oligomer |
|
HHblits |
0.33 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3uzv.1 -------------------------------------------------------------DSPVNIEAEPPFGDSYIII
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3uzv.1 GVEPGQLKLNWF-------KKGSSIGQ--------
|
|
3uzq.1.B |
envelope protein
Crystal structure of the dengue virus serotype 1 envelope protein domain III in complex with the variable domains of Mab 4E11 |
0.07 |
|
21.62 |
0.33 |
62-105 |
X-ray |
1.60 |
hetero-oligomer |
1 x MES |
HHblits |
0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3uzq.1 -------------------------------------------------------------EKPVNIETEPPFGESYIIV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3uzq.1 GAGEKALKLSWF-------KKGSSIGK--------
|
|
3uyp.1.B |
Envelope protein
Crystal structure of the dengue virus serotype 4 envelope protein domain III in complex with the variable domains of Mab 4E11 |
0.07 |
|
21.62 |
0.33 |
62-105 |
X-ray |
2.00 |
hetero-oligomer |
|
HHblits |
0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3uyp.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3uyp.1 GVGDSALTLHWF-------RKGSSIGK--------
|
|
5aaw.4.B |
DENGUE SEROTYPE 4 ENVELOPE PROTEIN DOMAIN 3
Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency |
0.06 |
|
25.00 |
0.28 |
62-93 |
X-ray |
3.27 |
hetero-oligomer |
|
HHblits |
0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5aaw.4 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5aaw.4 GVGNSALTLHWFRKG--------------------
|
|
5aam.1.B |
ENVELOPE PROTEIN
Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency |
0.06 |
|
25.00 |
0.28 |
62-93 |
X-ray |
2.49 |
hetero-oligomer |
|
HHblits |
0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5aam.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5aam.1 GVGNSALTLHWFRKG--------------------
|
|
5aam.2.B |
ENVELOPE PROTEIN
Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency |
0.06 |
|
25.00 |
0.28 |
62-93 |
X-ray |
2.49 |
hetero-oligomer |
|
HHblits |
0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5aam.2 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5aam.2 GVGNSALTLHWFRKG--------------------
|
|
4x42.1.A |
Envelope protein E
Crystal structure of DEN4 ED3 mutant with epitope two residues substituted from DEN3 ED3 |
0.06 |
|
25.81 |
0.27 |
62-92 |
X-ray |
2.78 |
homo-dimer |
|
HHblits |
0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4x42.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4x42.1 GVGDKALKLNWFRK---------------------
|
|
4ffy.1.C |
envelope glycoprotein
Crystal structure of DENV1-E111 single chain variable fragment bound to DENV-1 DIII, strain 16007. |
0.06 |
|
22.58 |
0.27 |
62-92 |
X-ray |
2.50 |
hetero-oligomer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4ffy.1 -------------------------------------------------------------EKPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4ffy.1 GAGEKALKLSWFKK---------------------
|
|
4l5f.1.B |
Envelope protein
Crystal Structure of DENV1-E106 Fab bound to DENV-1 Envelope protein DIII |
0.06 |
|
22.58 |
0.27 |
62-92 |
X-ray |
2.45 |
hetero-oligomer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4l5f.1 -------------------------------------------------------------EKPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4l5f.1 GAGEKALKLSWFKK---------------------
|
|
5vic.1.C |
Dengue 1 Envelope DIII domain
Crystal structure of anti-Zika antibody Z004 bound to DENV-1 Envelope protein DIII |
0.06 |
|
22.58 |
0.27 |
62-92 |
X-ray |
3.00 |
hetero-oligomer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5vic.1 -------------------------------------------------------------EKPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5vic.1 GAGEKALKLSWFKK---------------------
|
|
6dfj.1.C |
Dengue 1 Envelope DIII domain
Crystal structure of anti-Zika antibody Z021 bound to DENV-1 envelope protein DIII |
0.06 |
|
22.58 |
0.27 |
62-92 |
X-ray |
2.07 |
hetero-1-1-1-mer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6dfj.1 -------------------------------------------------------------EKPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6dfj.1 GAGEKALKLSWFKK---------------------
|
|
3irc.1.A |
ENVELOPE PROTEIN
Crystal structure analysis of dengue-1 envelope protein domain III |
0.06 |
|
22.58 |
0.27 |
62-92 |
X-ray |
2.25 |
monomer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3irc.1 -------------------------------------------------------------EKPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3irc.1 GAGEKALKLSWFKK---------------------
|
|
3we1.1.A |
Envelope protein E
Crystal structure of Dengue 4 Envelope protein domain III (ED3) |
0.06 |
|
22.58 |
0.27 |
62-92 |
X-ray |
2.28 |
homo-dimer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3we1.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3we1.1 GVGNSALTLHWFRK---------------------
|
|
5b1c.1.A |
Envelope protein E
Crystal structure of DEN4 ED3 mutant with L387I |
0.06 |
|
22.58 |
0.27 |
62-92 |
X-ray |
2.00 |
homo-dimer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5b1c.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5b1c.1 GVGNSALTIHWFRK---------------------
|
|
4bz1.1.A |
ENVELOPE PROTEIN
Structure of dengue virus EDIII in complex with Fab 3e31 |
0.06 |
|
22.58 |
0.27 |
62-92 |
X-ray |
2.15 |
hetero-oligomer |
1 x ZN |
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4bz1.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4bz1.1 GVGDSALTLHWFRK---------------------
|
|
4am0.1.C |
ENVELOPE PROTEIN,
Structure of Dengue virus strain 4 DIII in complex with Fab 2H12 |
0.06 |
|
22.58 |
0.27 |
62-92 |
X-ray |
3.02 |
hetero-1-1-1-mer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4am0.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4am0.1 GVGDSALTLHWFRK---------------------
|
|
1s6n.1.A |
envelope glycoprotein
NMR Structure of Domain III of the West Nile Virus Envelope Protein, Strain 385-99 |
0.05 |
|
16.13 |
0.27 |
62-92 |
NMR |
0.00 |
monomer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 1s6n.1 -------------------------------------------------------------NAKVLIELEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1s6n.1 GRGEQQINHHWHKS---------------------
|
|
1ztx.1.A |
Envelope protein
West Nile Virus Envelope Protein DIII in complex with neutralizing E16 antibody Fab |
0.07 |
|
16.13 |
0.27 |
62-92 |
X-ray |
2.50 |
hetero-oligomer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 1ztx.1 -------------------------------------------------------------NAKVLIELEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1ztx.1 GRGEQQINHHWHKS---------------------
|
|
6s93.1.A |
Genome polyprotein
Crystal structure of group B of Usutu virus envelope protein domain III |
0.07 |
|
12.90 |
0.27 |
62-92 |
X-ray |
1.67 |
monomer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s93.1 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s93.1 GRGDKQINHHWHKA---------------------
|
|
6s93.2.A |
Genome polyprotein
Crystal structure of group B of Usutu virus envelope protein domain III |
0.07 |
|
12.90 |
0.27 |
62-92 |
X-ray |
1.67 |
monomer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s93.2 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s93.2 GRGDKQINHHWHKA---------------------
|
|
6s93.3.A |
Genome polyprotein
Crystal structure of group B of Usutu virus envelope protein domain III |
0.07 |
|
12.90 |
0.27 |
62-92 |
X-ray |
1.67 |
monomer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s93.3 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s93.3 GRGDKQINHHWHKA---------------------
|
|
6s92.1.A |
Genome polyprotein
Crystal structure of group A of Usutu virus envelope protein domain III |
0.06 |
|
12.90 |
0.27 |
62-92 |
X-ray |
1.93 |
homo-dimer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s92.1 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s92.1 GRGDKQINHHWHKA---------------------
|
|
6s94.1.A |
Genome polyprotein
Crystal structure of group D of Usutu virus envelope protein domain III |
0.06 |
|
12.90 |
0.27 |
62-92 |
X-ray |
1.79 |
homo-dimer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s94.1 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s94.1 GRGDKQINHHWHKA---------------------
|
|
6s94.1.B |
Genome polyprotein
Crystal structure of group D of Usutu virus envelope protein domain III |
0.07 |
|
12.90 |
0.27 |
62-92 |
X-ray |
1.79 |
homo-dimer |
|
HHblits |
0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s94.1 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s94.1 GRGDKQINHHWHKA---------------------
|
|
5omz.1.A |
Envelope Protein
Solution structure of domain III (DIII)of Zika virus Envelope protein |
0.05 |
|
16.13 |
0.27 |
62-92 |
NMR |
0.00 |
monomer |
|
HHblits |
0.30 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5omz.1 -------------------------------------------------------------NSKMMLELDPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5omz.1 GVGEKKITHHWHRS---------------------
|
|
2jqm.1.A |
Envelope protein E
Yellow Fever Envelope Protein Domain III NMR Structure (S288-K398) |
0.06 |
|
12.90 |
0.27 |
62-92 |
NMR |
0.00 |
monomer |
|
HHblits |
0.30 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 2jqm.1 -------------------------------------------------------------DDEVLIEVNPPFGDSYIIV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2jqm.1 GTGDSRLTYQWHKE---------------------
|
|
2jv6.1.A |
Envelope protein E
YF ED3 Protein NMR Structure |
0.06 |
|
12.90 |
0.27 |
62-92 |
NMR |
0.00 |
monomer |
|
HHblits |
0.30 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 2jv6.1 -------------------------------------------------------------DDEVLIEVNPPFGDSYIIV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2jv6.1 GTGDSRLTYQWHKE---------------------
|
|
4ffz.1.A |
Envelope protein E
Crystal Structure of DENV1-E111 fab fragment bound to DENV-1 DIII (Western Pacific-74 strain). |
0.06 |
|
23.33 |
0.27 |
63-92 |
X-ray |
3.80 |
hetero-oligomer |
|
HHblits |
0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4ffz.1 --------------------------------------------------------------KPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4ffz.1 GAGEKALKLSWFKK---------------------
|
|
3vtt.1.A |
Envelope protein E
High Resolution crystal structure of Dengue 3 Envelope protein domain III (ED3) |
0.06 |
|
19.35 |
0.27 |
62-92 |
X-ray |
1.70 |
monomer |
|
HHblits |
0.29 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3vtt.1 -------------------------------------------------------------EEPVNIEAEPPFGESNIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3vtt.1 GIGDKALKINWYRK---------------------
|
|
3vtt.2.A |
Envelope protein E
High Resolution crystal structure of Dengue 3 Envelope protein domain III (ED3) |
0.07 |
|
19.35 |
0.27 |
62-92 |
X-ray |
1.70 |
monomer |
|
HHblits |
0.29 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3vtt.2 -------------------------------------------------------------EEPVNIEAEPPFGESNIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3vtt.2 GIGDKALKINWYRK---------------------
|
|
3ie4.1.A |
Gram-Negative Binding Protein 3
b-glucan binding domain of Drosophila GNBP3 defines a novel family of pattern recognition receptor |
0.04 |
|
19.35 |
0.27 |
68-98 |
X-ray |
1.45 |
monomer |
4 x ZN |
HHblits |
0.28 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 3ie4.1 -------------------------------------------------------------------DVFYPKGFEVSIP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3ie4.1 DEEGITLFAFHGKLNEEM---------------
|
|
2vtx.1.A |
NPM-A PROTEIN
ACTIVATION OF NUCLEOPLASMIN, AN OLIGOMERIC HISTONE CHAPERONE, CHALLENGES ITS STABILITY |
0.01 |
|
36.84 |
0.17 |
66-84 |
X-ray |
2.50 |
homo-pentamer |
|
HHblits |
0.37 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2vtx.1 -----------------------------------------------------------------GIELDPPVTFRLKAG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2vtx.1 SGPL-----------------------------
|
|
2vtx.1.D |
NPM-A PROTEIN
ACTIVATION OF NUCLEOPLASMIN, AN OLIGOMERIC HISTONE CHAPERONE, CHALLENGES ITS STABILITY |
0.02 |
|
36.84 |
0.17 |
66-84 |
X-ray |
2.50 |
homo-pentamer |
|
HHblits |
0.37 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2vtx.1 -----------------------------------------------------------------GIELDPPVTFRLKAG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2vtx.1 SGPL-----------------------------
|
|
1k5j.1.A |
Nucleoplasmin Core
The Crystal Structure of Nucleoplasmin-Core |
0.02 |
|
36.84 |
0.17 |
66-84 |
X-ray |
2.30 |
homo-pentamer |
|
HHblits |
0.36 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 1k5j.1 -----------------------------------------------------------------GIELTPPVTFRLKAG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1k5j.1 SGPL-----------------------------
|
|
1lto.1.A |
alpha tryptase I
Human alpha1-tryptase |
0.05 |
|
9.09 |
0.19 |
27-48 |
X-ray |
2.20 |
homo-tetramer |
|
HHblits |
0.22 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 1lto.1 --------------------------SGGPLVCKVNGTWLQAGVVSWD--------------------------------
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1lto.1 ---------------------------------
|