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Secondary Structure
None DSSP PSIPRED SSpro
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Fade Mismatches Enhance Mismatches
Confidencegradient Confidenceclass Indels Chain Unique Chain Rainbow 2° Structure Clustal Hydrophobic Size Charged Polar Proline Ser/Thr Cysteine Aliphatic Aromatic No Colour
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NGL PV

### Non-structural protein 9 (nsp9) | P0DTD1 PRO_0000449627

### Created: May 5, 2023, 9:34 p.m. at 21:34

Models | Name | Description | GMQE | QSQE | Seq Id | Coverage | Range | Method | Resolution | Oligo-state | Ligands | Found by | Seq Similarity
| 8dqu.1.C | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.G | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.W | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.K | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.O | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.S | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7bwq.1.B | Nsp9 Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.84 | 0.92 | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7bwq.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7bwq.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7bwq.1.A | Nsp9 Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.87 | 0.92 | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7bwq.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7bwq.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7bwq.2.B | Nsp9 Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.85 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7bwq.2    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7bwq.2    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7bwq.2.A | Nsp9 Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.84 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7bwq.2    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7bwq.2    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7bwq.3.A | Nsp9 Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.84 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7bwq.3    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7bwq.3    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7thm.1.E | Non-structural protein 9 SARS-CoV-2 nsp12/7/8 complex with a native N-terminus nsp9 | 0.60 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-1-mer | 2 x ZN, 1 x MN, 1 x POP | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7thm.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7thm.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8gwi.1.I | Non-structural protein 9 A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.77 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GTP | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8gwi.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8gwi.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8gwn.1.I | Non-structural protein 9 A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.77 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GNP | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8gwn.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8gwn.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7eiz.1.E | Non-structural protein 9 Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading | 0.82 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-1-1-1-… | 13 x ZN, 1 x MG | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7eiz.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7eiz.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7bwq.3.B | Nsp9 Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.87 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7bwq.3    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7bwq.3    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.P | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.62 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.T | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.62 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.D | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.62 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.H | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.62 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.L | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.62 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8dqu.1.X | Non-structural protein 9 Nanobody bound SARS-CoV-2 Nsp9 | 0.62 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8dqu.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8dqu.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8gwo.1.I | Non-structural protein 9 A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.81 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GNP | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8gwo.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8gwo.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 6wc1.1.A | SARS-coV-2 Non-structural protein 9 Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.89 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.40 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    6wc1.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6wc1.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 6wxd.1.A | Non-structural protein 9 SARS-CoV-2 Nsp9 RNA-replicase | 0.90 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.00 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    6wxd.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6wxd.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 6wc1.1.B | SARS-coV-2 Non-structural protein 9 Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.89 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.40 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    6wc1.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6wc1.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 6wxd.1.B | Non-structural protein 9 SARS-CoV-2 Nsp9 RNA-replicase | 0.88 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.00 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    6wxd.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6wxd.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8gwg.1.I | Non-structural protein 9 A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.77 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GTP | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8gwg.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8gwg.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8gwf.1.I | Non-structural protein 9 A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.77 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GTP | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8gwf.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8gwf.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8gwe.1.I | Non-structural protein 9 A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.77 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GNP, 1 x MG, 1 x A-U-U-A | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8gwe.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8gwe.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
✓ | 6w4b.1.B | Non-structural protein 9 The crystal structure of Nsp9 RNA binding protein of SARS CoV-2 | 0.88 | 0.94 | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    6w4b.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6w4b.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7cyq.1.I | Non-structural protein 9 Cryo-EM structure of an extended SARS-CoV-2 replication and transcription complex reveals an intermediate state in cap synthesis | 0.83 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GDP, 1 x MG | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7cyq.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7cyq.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 6w4b.1.A | Non-structural protein 9 The crystal structure of Nsp9 RNA binding protein of SARS CoV-2 | 0.88 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    6w4b.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6w4b.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 8gwb.1.I | Non-structural protein 9 A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.82 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 2 x MN, 1 x A-U | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    8gwb.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    8gwb.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7egq.1.F | Non-structural protein 9 Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | 0.83 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-2-4-2-4-2-2-… | 26 x ZN, 3 x MG | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7egq.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7egq.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7egq.1.N | Non-structural protein 9 Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | 0.82 |  | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-2-4-2-4-2-2-… | 26 x ZN, 3 x MG | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7egq.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7egq.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 6w9q.1.A | 3C-like proteinase peptide, Non-structural protein 9 fusion Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.87 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.05 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    6w9q.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6w9q.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 6w9q.1.B | 3C-like proteinase peptide, Non-structural protein 9 fusion Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.87 |  | 100.00 | 1.00 | 1-113 | X-ray | 2.05 | homo-dimer |  | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    6w9q.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6w9q.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7kri.1.C | Non-structural protein 9 FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.87 |  | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7kri.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7kri.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7kri.1.F | Non-structural protein 9 FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.87 |  | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7kri.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7kri.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7kri.1.E | Non-structural protein 9 FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.89 |  | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7kri.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7kri.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7kri.1.B | Non-structural protein 9 FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.89 |  | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7kri.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7kri.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7kri.1.D | Non-structural protein 9 FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.86 |  | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7kri.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7kri.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7kri.1.A | Non-structural protein 9 FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.86 |  | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7kri.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7kri.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7n3k.2.B | Non-structural protein 9 Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 |  | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7n3k.2    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7n3k.2    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7n3k.4.B | Non-structural protein 9 Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 |  | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7n3k.4    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7n3k.4    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7n3k.4.A | Non-structural protein 9 Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 |  | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7n3k.4    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7n3k.4    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7n3k.2.A | Non-structural protein 9 Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 |  | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7n3k.2    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7n3k.2    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7n3k.3.A | Non-structural protein 9 Oridonin-bound SARS-CoV-2 Nsp9 | 0.89 |  | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7n3k.3    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7n3k.3    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7n3k.1.A | Non-structural protein 9 Oridonin-bound SARS-CoV-2 Nsp9 | 0.89 |  | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7n3k.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7n3k.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7n3k.1.B | Non-structural protein 9 Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 |  | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7n3k.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7n3k.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 7n3k.3.B | Non-structural protein 9 Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 |  | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    7n3k.3    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    7n3k.3    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 1qz8.1.A | polyprotein 1ab Crystal structure of SARS coronavirus NSP9 | 0.88 |  | 97.35 | 1.00 | 1-113 | X-ray | 2.70 | homo-dimer |  | HHblits | 0.61
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    1qz8.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    1qz8.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
✓ | 1qz8.1.B | polyprotein 1ab Crystal structure of SARS coronavirus NSP9 | 0.87 | 0.92 | 97.35 | 1.00 | 1-113 | X-ray | 2.70 | homo-dimer |  | HHblits | 0.61
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    1qz8.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    1qz8.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
✓ | 1uw7.1.A | NSP9 Nsp9 protein from SARS-coronavirus. | 0.85 | 0.91 | 97.35 | 1.00 | 1-113 | X-ray | 2.80 | homo-dimer |  | HHblits | 0.61
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    1uw7.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    1uw7.1    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
| 3ee7.1.B | Replicase polyprotein 1a Crystal Structure of SARS-CoV nsp9 G104E | 0.86 |  | 96.46 | 1.00 | 1-113 | X-ray | 2.60 | homo-dimer |  | HHblits | 0.60
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    3ee7.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3ee7.1    KGPKVKYLYFIKGLNNLNRGMVLESLAATVRLQ
| 3ee7.1.A | Replicase polyprotein 1a Crystal Structure of SARS-CoV nsp9 G104E | 0.85 |  | 96.46 | 1.00 | 1-113 | X-ray | 2.60 | homo-dimer |  | HHblits | 0.60
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    3ee7.1    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3ee7.1    KGPKVKYLYFIKGLNNLNRGMVLESLAATVRLQ
| 3ee7.2.B | Replicase polyprotein 1a Crystal Structure of SARS-CoV nsp9 G104E | 0.86 |  | 96.46 | 1.00 | 1-113 | X-ray | 2.60 | homo-dimer |  | HHblits | 0.60
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    3ee7.2    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3ee7.2    KGPKVKYLYFIKGLNNLNRGMVLESLAATVRLQ
| 2j97.1.A | REPLICASE POLYPROTEIN 1AB Human coronavirus 229E non structural protein 9 (Nsp9) | 0.61 |  | 45.87 | 0.96 | 1-113 | X-ray | 1.75 | homo-dimer |  | BLAST | 0.43
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    2j97.1    NNEIMPGKMKVKATKGEGDGGITSEGNAL--YNNEGGRAFMYAYVTTKPGMKYVKWEHDSGVVTV--ELEPPCRFVIDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2j97.1    TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
| 2j98.1.B | REPLICASE POLYPROTEIN 1AB Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) | 0.62 |  | 44.95 | 0.96 | 1-113 | X-ray | 1.80 | hetero-1-1-mer | 1 x DTT | BLAST | 0.42
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    2j98.1    NNEIKPGKMKVKATKGEGDGGITSEGNAL--YNNEGGRAFMYAYVTTKPGMKYVKWEHDSGVVTV--ELEPPARFVIDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2j98.1    TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
| 2j98.1.A | REPLICASE POLYPROTEIN 1AB Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) | 0.63 |  | 44.95 | 0.96 | 1-113 | X-ray | 1.80 | hetero-1-1-mer | 1 x DTT | BLAST | 0.42
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    2j98.1    NNEIMPGKMKVKATKGEGDGGITSEGNAL--YNNEGGRAFMYAYVTTKPGMKYVKWEHDSGVVTV--ELEPPARFVIDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2j98.1    TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
| 2j97.1.A | REPLICASE POLYPROTEIN 1AB Human coronavirus 229E non structural protein 9 (Nsp9) | 0.68 |  | 44.04 | 0.96 | 1-113 | X-ray | 1.75 | homo-dimer |  | HHblits | 0.42
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    2j97.1    NNEIMPGKMKVKATKGEGDG-GITS-EGNALYNNEGGRAFMYAYVTTKPGMKYVKWEHD--SGVVTVELEPPCRFVIDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2j97.1    TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
| 2j98.1.B | REPLICASE POLYPROTEIN 1AB Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) | 0.67 |  | 43.12 | 0.96 | 1-113 | X-ray | 1.80 | hetero-1-1-mer | 1 x DTT | HHblits | 0.41
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    2j98.1    NNEIKPGKMKVKATKGEGDG-GITS-EGNALYNNEGGRAFMYAYVTTKPGMKYVKWEHD--SGVVTVELEPPARFVIDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2j98.1    TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
| 2j98.1.A | REPLICASE POLYPROTEIN 1AB Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) | 0.70 |  | 43.12 | 0.96 | 1-113 | X-ray | 1.80 | hetero-1-1-mer | 1 x DTT | HHblits | 0.41
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    2j98.1    NNEIMPGKMKVKATKGEGDG-GITS-EGNALYNNEGGRAFMYAYVTTKPGMKYVKWEHD--SGVVTVELEPPARFVIDTP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2j98.1    TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
| 5c94.1.A | Non-structural protein 9 Infectious bronchitis virus nsp9 | 0.69 |  | 39.64 | 0.98 | 1-113 | X-ray | 2.44 | homo-dimer |  | BLAST | 0.39
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5c94.1    NNELMPHGVKTKACVAGVDQAHCSVESK-CYYTSISGSSVVAAITSSNPNLKVASFLNEAGN-QIYVDLDPPCKFGMKVG

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5c94.1    DKVEVVYLYFIKNTRSIVRGMVLGAISNVVVLQ
| 5c94.1.A | Non-structural protein 9 Infectious bronchitis virus nsp9 | 0.70 |  | 39.64 | 0.98 | 1-113 | X-ray | 2.44 | homo-dimer |  | HHblits | 0.39
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5c94.1    NNELMPHGVKTKACVAGVDQAHCSV-ESKCYYTSISGSSVVAAITSSNPNLKVASFLNEAGN-QIYVDLDPPCKFGMKVG

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5c94.1    DKVEVVYLYFIKNTRSIVRGMVLGAISNVVVLQ
| 5hiy.2.A | Non-structural protein 9 Crystal structure of PEDV NSP9 Mutant-C59A | 0.61 |  | 45.37 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer |  | BLAST | 0.41
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5hiy.2    NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGANTI--ELEPPRKFLVDSP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5hiy.2    NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
| 5hiy.1.B | Non-structural protein 9 Crystal structure of PEDV NSP9 Mutant-C59A | 0.64 |  | 45.37 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer |  | BLAST | 0.41
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5hiy.1    NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGANTI--ELEPPRKFLVDSP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5hiy.1    NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
| 5hiy.1.A | Non-structural protein 9 Crystal structure of PEDV NSP9 Mutant-C59A | 0.62 |  | 45.37 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer |  | BLAST | 0.41
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5hiy.1    NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGANTI--ELEPPRKFLVDSP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5hiy.1    NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
| 5hiz.1.A | Non-structural protein 9 The structure of PEDV NSP9 | 0.60 |  | 45.37 | 0.96 | 1-113 | X-ray | 2.90 | homo-dimer |  | BLAST | 0.41
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5hiz.1    NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGCNTI--ELEPPRKFLVDSP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5hiz.1    NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
| 5hiz.1.B | Non-structural protein 9 The structure of PEDV NSP9 | 0.60 |  | 45.37 | 0.96 | 1-113 | X-ray | 2.90 | homo-dimer |  | BLAST | 0.41
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5hiz.1    NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGCNTI--ELEPPRKFLVDSP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5hiz.1    NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
| 5hiy.2.A | Non-structural protein 9 Crystal structure of PEDV NSP9 Mutant-C59A | 0.61 |  | 43.52 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer |  | HHblits | 0.40
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5hiy.2    NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGANTIELEPPRKFLVDSP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5hiy.2    NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
| 5hiy.1.B | Non-structural protein 9 Crystal structure of PEDV NSP9 Mutant-C59A | 0.64 |  | 43.52 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer |  | HHblits | 0.40
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5hiy.1    NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGANTIELEPPRKFLVDSP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5hiy.1    NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
| 5hiy.1.A | Non-structural protein 9 Crystal structure of PEDV NSP9 Mutant-C59A | 0.61 |  | 43.52 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer |  | HHblits | 0.40
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5hiy.1    NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGANTIELEPPRKFLVDSP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5hiy.1    NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
| 5hiz.1.A | Non-structural protein 9 The structure of PEDV NSP9 | 0.61 |  | 43.52 | 0.96 | 1-113 | X-ray | 2.90 | homo-dimer |  | HHblits | 0.40
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5hiz.1    NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGCNTIELEPPRKFLVDSP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5hiz.1    NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
| 5hiz.1.B | Non-structural protein 9 The structure of PEDV NSP9 | 0.60 |  | 43.52 | 0.96 | 1-113 | X-ray | 2.90 | homo-dimer |  | HHblits | 0.40
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5hiz.1    NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGCNTIELEPPRKFLVDSP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5hiz.1    NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
| 5ym6.1.A | nsp9 Crystal Structure of porcine delta coronavirus nsp9 | 0.51 |  | 36.11 | 0.96 | 1-113 | X-ray | 1.80 | homo-dimer |  | BLAST | 0.38
    target    NNELSPVALRQMSCAAGTTQTACTDDNAL-AYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT
    5ym6.1    NNEL---CLRNVFTAQNTAQDFNGNESTVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV

    target    PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5ym6.1    GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
| 5ym6.1.B | nsp9 Crystal Structure of porcine delta coronavirus nsp9 | 0.54 |  | 36.11 | 0.96 | 1-113 | X-ray | 1.80 | homo-dimer |  | BLAST | 0.38
    target    NNELSPVALRQMSCAAGTTQTACTDDNAL-AYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT
    5ym6.1    NNEL---CLRNVFTAQNTAQDFNGNESTVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV

    target    PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5ym6.1    GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
| 5ym6.1.A | nsp9 Crystal Structure of porcine delta coronavirus nsp9 | 0.57 |  | 32.41 | 0.96 | 1-113 | X-ray | 1.80 | homo-dimer |  | HHblits | 0.35
    target    NNELSP-VALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT
    5ym6.1    NNELCLRNVFTAQNTAQDFN-GNES--TVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV

    target    PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5ym6.1    GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
| 5ym6.1.B | nsp9 Crystal Structure of porcine delta coronavirus nsp9 | 0.59 |  | 32.41 | 0.96 | 1-113 | X-ray | 1.80 | homo-dimer |  | HHblits | 0.35
    target    NNELSP-VALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT
    5ym6.1    NNELCLRNVFTAQNTAQDFN-GNES--TVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV

    target    PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5ym6.1    GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
| 5ym8.1.A | nsp9 Crystal Structure of porcine delta coronavirus nsp9-N7 | 0.55 |  | 30.39 | 0.90 | 7-113 | X-ray | 1.99 | monomer |  | HHblits | 0.35
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5ym8.1    ------NVFTAQNTAQDFN-GNES--TVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTVG

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5ym8.1    GKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
| 5ym8.1.A | nsp9 Crystal Structure of porcine delta coronavirus nsp9-N7 | 0.44 |  | 36.59 | 0.73 | 30-113 | X-ray | 1.99 | monomer |  | BLAST | 0.38
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    5ym8.1    -----------------------------SFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTVG

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5ym8.1    GKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
| 2p5p.1.A | Genome polyprotein Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III | 0.09 |  | 19.51 | 0.36 | 62-109 | X-ray | 2.80 | monomer |  | HHblits | 0.32
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    2p5p.1    -------------------------------------------------------------NAKVLIELEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2p5p.1    GRGEQQINHHWH-------KSGSSIGKAFTT----
| 2p5p.2.A | Genome polyprotein Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III | 0.08 |  | 19.51 | 0.36 | 62-109 | X-ray | 2.80 | monomer |  | HHblits | 0.32
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    2p5p.2    -------------------------------------------------------------NAKVLIELEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2p5p.2    GRGEQQINHHWH-------KSGSSIGKAFTT----
| 2p5p.3.A | Genome polyprotein Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III | 0.08 |  | 19.51 | 0.36 | 62-109 | X-ray | 2.80 | monomer |  | HHblits | 0.32
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    2p5p.3    -------------------------------------------------------------NAKVLIELEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2p5p.3    GRGEQQINHHWH-------KSGSSIGKAFTT----
| 3uzv.1.A | envelope protein Crystal structure of the dengue virus serotype 2 envelope protein domain III in complex with the variable domains of Mab 4E11 | 0.07 |  | 21.62 | 0.33 | 62-105 | X-ray | 2.10 | hetero-oligomer |  | HHblits | 0.33
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    3uzv.1    -------------------------------------------------------------DSPVNIEAEPPFGDSYIII

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3uzv.1    GVEPGQLKLNWF-------KKGSSIGQ--------
| 3uzq.1.B | envelope protein Crystal structure of the dengue virus serotype 1 envelope protein domain III in complex with the variable domains of Mab 4E11 | 0.07 |  | 21.62 | 0.33 | 62-105 | X-ray | 1.60 | hetero-oligomer | 1 x MES | HHblits | 0.32
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    3uzq.1    -------------------------------------------------------------EKPVNIETEPPFGESYIIV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3uzq.1    GAGEKALKLSWF-------KKGSSIGK--------
| 3uyp.1.B | Envelope protein Crystal structure of the dengue virus serotype 4 envelope protein domain III in complex with the variable domains of Mab 4E11 | 0.07 |  | 21.62 | 0.33 | 62-105 | X-ray | 2.00 | hetero-oligomer |  | HHblits | 0.32
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    3uyp.1    -------------------------------------------------------------NSVTNIELEPPFGDSYIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3uyp.1    GVGDSALTLHWF-------RKGSSIGK--------
| 5aaw.4.B | DENGUE SEROTYPE 4 ENVELOPE PROTEIN DOMAIN 3 Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency | 0.06 |  | 25.00 | 0.28 | 62-93 | X-ray | 3.27 | hetero-oligomer |  | HHblits | 0.32
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    5aaw.4    -------------------------------------------------------------NSVTNIELEPPFGDSYIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5aaw.4    GVGNSALTLHWFRKG--------------------
| 5aam.1.B | ENVELOPE PROTEIN Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency | 0.06 |  | 25.00 | 0.28 | 62-93 | X-ray | 2.49 | hetero-oligomer |  | HHblits | 0.32
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    5aam.1    -------------------------------------------------------------NSVTNIELEPPFGDSYIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5aam.1    GVGNSALTLHWFRKG--------------------
| 5aam.2.B | ENVELOPE PROTEIN Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency | 0.06 |  | 25.00 | 0.28 | 62-93 | X-ray | 2.49 | hetero-oligomer |  | HHblits | 0.32
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    5aam.2    -------------------------------------------------------------NSVTNIELEPPFGDSYIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5aam.2    GVGNSALTLHWFRKG--------------------
| 4x42.1.A | Envelope protein E Crystal structure of DEN4 ED3 mutant with epitope two residues substituted from DEN3 ED3 | 0.06 |  | 25.81 | 0.27 | 62-92 | X-ray | 2.78 | homo-dimer |  | HHblits | 0.32
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    4x42.1    -------------------------------------------------------------NSVTNIELEPPFGDSYIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    4x42.1    GVGDKALKLNWFRK---------------------
| 4ffy.1.C | envelope glycoprotein Crystal structure of DENV1-E111 single chain variable fragment bound to DENV-1 DIII, strain 16007. | 0.06 |  | 22.58 | 0.27 | 62-92 | X-ray | 2.50 | hetero-oligomer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    4ffy.1    -------------------------------------------------------------EKPVNIEAEPPFGESYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    4ffy.1    GAGEKALKLSWFKK---------------------
| 4l5f.1.B | Envelope protein Crystal Structure of DENV1-E106 Fab bound to DENV-1 Envelope protein DIII | 0.06 |  | 22.58 | 0.27 | 62-92 | X-ray | 2.45 | hetero-oligomer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    4l5f.1    -------------------------------------------------------------EKPVNIEAEPPFGESYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    4l5f.1    GAGEKALKLSWFKK---------------------
| 5vic.1.C | Dengue 1 Envelope DIII domain Crystal structure of anti-Zika antibody Z004 bound to DENV-1 Envelope protein DIII | 0.06 |  | 22.58 | 0.27 | 62-92 | X-ray | 3.00 | hetero-oligomer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    5vic.1    -------------------------------------------------------------EKPVNIEAEPPFGESYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5vic.1    GAGEKALKLSWFKK---------------------
| 6dfj.1.C | Dengue 1 Envelope DIII domain Crystal structure of anti-Zika antibody Z021 bound to DENV-1 envelope protein DIII | 0.06 |  | 22.58 | 0.27 | 62-92 | X-ray | 2.07 | hetero-1-1-1-mer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    6dfj.1    -------------------------------------------------------------EKPVNIEAEPPFGESYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6dfj.1    GAGEKALKLSWFKK---------------------
| 3irc.1.A | ENVELOPE PROTEIN Crystal structure analysis of dengue-1 envelope protein domain III | 0.06 |  | 22.58 | 0.27 | 62-92 | X-ray | 2.25 | monomer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    3irc.1    -------------------------------------------------------------EKPVNIEAEPPFGESYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3irc.1    GAGEKALKLSWFKK---------------------
| 3we1.1.A | Envelope protein E Crystal structure of Dengue 4 Envelope protein domain III (ED3) | 0.06 |  | 22.58 | 0.27 | 62-92 | X-ray | 2.28 | homo-dimer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    3we1.1    -------------------------------------------------------------NSVTNIELEPPFGDSYIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3we1.1    GVGNSALTLHWFRK---------------------
| 5b1c.1.A | Envelope protein E Crystal structure of DEN4 ED3 mutant with L387I | 0.06 |  | 22.58 | 0.27 | 62-92 | X-ray | 2.00 | homo-dimer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    5b1c.1    -------------------------------------------------------------NSVTNIELEPPFGDSYIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5b1c.1    GVGNSALTIHWFRK---------------------
| 4bz1.1.A | ENVELOPE PROTEIN Structure of dengue virus EDIII in complex with Fab 3e31 | 0.06 |  | 22.58 | 0.27 | 62-92 | X-ray | 2.15 | hetero-oligomer | 1 x ZN | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    4bz1.1    -------------------------------------------------------------NSVTNIELEPPFGDSYIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    4bz1.1    GVGDSALTLHWFRK---------------------
| 4am0.1.C | ENVELOPE PROTEIN, Structure of Dengue virus strain 4 DIII in complex with Fab 2H12 | 0.06 |  | 22.58 | 0.27 | 62-92 | X-ray | 3.02 | hetero-1-1-1-mer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    4am0.1    -------------------------------------------------------------NSVTNIELEPPFGDSYIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    4am0.1    GVGDSALTLHWFRK---------------------
| 1s6n.1.A | envelope glycoprotein NMR Structure of Domain III of the West Nile Virus Envelope Protein, Strain 385-99 | 0.05 |  | 16.13 | 0.27 | 62-92 | NMR | 0.00 | monomer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    1s6n.1    -------------------------------------------------------------NAKVLIELEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    1s6n.1    GRGEQQINHHWHKS---------------------
| 1ztx.1.A | Envelope protein West Nile Virus Envelope Protein DIII in complex with neutralizing E16 antibody Fab | 0.07 |  | 16.13 | 0.27 | 62-92 | X-ray | 2.50 | hetero-oligomer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    1ztx.1    -------------------------------------------------------------NAKVLIELEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    1ztx.1    GRGEQQINHHWHKS---------------------
| 6s93.1.A | Genome polyprotein Crystal structure of group B of Usutu virus envelope protein domain III | 0.07 |  | 12.90 | 0.27 | 62-92 | X-ray | 1.67 | monomer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    6s93.1    -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6s93.1    GRGDKQINHHWHKA---------------------
| 6s93.2.A | Genome polyprotein Crystal structure of group B of Usutu virus envelope protein domain III | 0.07 |  | 12.90 | 0.27 | 62-92 | X-ray | 1.67 | monomer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    6s93.2    -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6s93.2    GRGDKQINHHWHKA---------------------
| 6s93.3.A | Genome polyprotein Crystal structure of group B of Usutu virus envelope protein domain III | 0.07 |  | 12.90 | 0.27 | 62-92 | X-ray | 1.67 | monomer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    6s93.3    -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6s93.3    GRGDKQINHHWHKA---------------------
| 6s92.1.A | Genome polyprotein Crystal structure of group A of Usutu virus envelope protein domain III | 0.06 |  | 12.90 | 0.27 | 62-92 | X-ray | 1.93 | homo-dimer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    6s92.1    -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6s92.1    GRGDKQINHHWHKA---------------------
| 6s94.1.A | Genome polyprotein Crystal structure of group D of Usutu virus envelope protein domain III | 0.06 |  | 12.90 | 0.27 | 62-92 | X-ray | 1.79 | homo-dimer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    6s94.1    -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6s94.1    GRGDKQINHHWHKA---------------------
| 6s94.1.B | Genome polyprotein Crystal structure of group D of Usutu virus envelope protein domain III | 0.07 |  | 12.90 | 0.27 | 62-92 | X-ray | 1.79 | homo-dimer |  | HHblits | 0.31
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    6s94.1    -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    6s94.1    GRGDKQINHHWHKA---------------------
| 5omz.1.A | Envelope Protein Solution structure of domain III (DIII)of Zika virus Envelope protein | 0.05 |  | 16.13 | 0.27 | 62-92 | NMR | 0.00 | monomer |  | HHblits | 0.30
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    5omz.1    -------------------------------------------------------------NSKMMLELDPPFGDSYIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    5omz.1    GVGEKKITHHWHRS---------------------
| 2jqm.1.A | Envelope protein E Yellow Fever Envelope Protein Domain III NMR Structure (S288-K398) | 0.06 |  | 12.90 | 0.27 | 62-92 | NMR | 0.00 | monomer |  | HHblits | 0.30
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    2jqm.1    -------------------------------------------------------------DDEVLIEVNPPFGDSYIIV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2jqm.1    GTGDSRLTYQWHKE---------------------
| 2jv6.1.A | Envelope protein E YF ED3 Protein NMR Structure | 0.06 |  | 12.90 | 0.27 | 62-92 | NMR | 0.00 | monomer |  | HHblits | 0.30
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    2jv6.1    -------------------------------------------------------------DDEVLIEVNPPFGDSYIIV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2jv6.1    GTGDSRLTYQWHKE---------------------
| 4ffz.1.A | Envelope protein E Crystal Structure of DENV1-E111 fab fragment bound to DENV-1 DIII (Western Pacific-74 strain). | 0.06 |  | 23.33 | 0.27 | 63-92 | X-ray | 3.80 | hetero-oligomer |  | HHblits | 0.32
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    4ffz.1    --------------------------------------------------------------KPVNIEAEPPFGESYIVV

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    4ffz.1    GAGEKALKLSWFKK---------------------
| 3vtt.1.A | Envelope protein E High Resolution crystal structure of Dengue 3 Envelope protein domain III (ED3) | 0.06 |  | 19.35 | 0.27 | 62-92 | X-ray | 1.70 | monomer |  | HHblits | 0.29
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    3vtt.1    -------------------------------------------------------------EEPVNIEAEPPFGESNIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3vtt.1    GIGDKALKINWYRK---------------------
| 3vtt.2.A | Envelope protein E High Resolution crystal structure of Dengue 3 Envelope protein domain III (ED3) | 0.07 |  | 19.35 | 0.27 | 62-92 | X-ray | 1.70 | monomer |  | HHblits | 0.29
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD
    3vtt.2    -------------------------------------------------------------EEPVNIEAEPPFGESNIVI

    target    TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3vtt.2    GIGDKALKINWYRK---------------------
| 3ie4.1.A | Gram-Negative Binding Protein 3 b-glucan binding domain of Drosophila GNBP3 defines a novel family of pattern recognition receptor | 0.04 |  | 19.35 | 0.27 | 68-98 | X-ray | 1.45 | monomer | 4 x ZN | HHblits | 0.28
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    3ie4.1    -------------------------------------------------------------------DVFYPKGFEVSIP

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    3ie4.1    DEEGITLFAFHGKLNEEM---------------
| 2vtx.1.A | NPM-A PROTEIN ACTIVATION OF NUCLEOPLASMIN, AN OLIGOMERIC HISTONE CHAPERONE, CHALLENGES ITS STABILITY | 0.01 |  | 36.84 | 0.17 | 66-84 | X-ray | 2.50 | homo-pentamer |  | HHblits | 0.37
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    2vtx.1    -----------------------------------------------------------------GIELDPPVTFRLKAG

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2vtx.1    SGPL-----------------------------
| 2vtx.1.D | NPM-A PROTEIN ACTIVATION OF NUCLEOPLASMIN, AN OLIGOMERIC HISTONE CHAPERONE, CHALLENGES ITS STABILITY | 0.02 |  | 36.84 | 0.17 | 66-84 | X-ray | 2.50 | homo-pentamer |  | HHblits | 0.37
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    2vtx.1    -----------------------------------------------------------------GIELDPPVTFRLKAG

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    2vtx.1    SGPL-----------------------------
| 1k5j.1.A | Nucleoplasmin Core The Crystal Structure of Nucleoplasmin-Core | 0.02 |  | 36.84 | 0.17 | 66-84 | X-ray | 2.30 | homo-pentamer |  | HHblits | 0.36
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    1k5j.1    -----------------------------------------------------------------GIELTPPVTFRLKAG

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    1k5j.1    SGPL-----------------------------
| 1lto.1.A | alpha tryptase I Human alpha1-tryptase | 0.05 |  | 9.09 | 0.19 | 27-48 | X-ray | 2.20 | homo-tetramer |  | HHblits | 0.22
    target    NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
    1lto.1    --------------------------SGGPLVCKVNGTWLQAGVVSWD--------------------------------

    target    KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
    1lto.1    ---------------------------------