Homology Modelling Report
Model Building Report
This document lists the results for the homology modelling project "Uridylate-specific endoribonuclease nsp15 | P0DTD1 PRO_0000449632" submitted to SWISS-MODEL workspace on May 5, 2023, 9:33 p.m..The submitted primary amino acid sequence is given in Table T1.
If you use any results in your research, please cite the relevant publications:
- Waterhouse A, Bertoni M, Bienert S, Studer G, Tauriello G, Gumienny R, Heer FT, de Beer TAP, Rempfer C, Bordoli L, Lepore R, Schwede TSWISS-MODEL: homology modelling of protein structures and complexes.Nucleic Acids Res 46, W296-W303. (2018)
29788355
10.1093/nar/gky427 - Bienert S, Waterhouse A, de Beer TAP, Tauriello G, Studer G, Bordoli L, Schwede TThe SWISS-MODEL Repository - new features and functionality.Nucleic Acids Res 45, D313-D319. (2017)2789967210.1093/nar/gkw1132
- Studer G, Tauriello G, Bienert S, Biasini M, Johner N, Schwede TProMod3 - A versatile homology modelling toolbox.PLOS Comp Biol 17(1), e1008667. (2021)3350798010.1371/journal.pcbi.1008667
- Studer G, Rempfer C, Waterhouse AM, Gumienny R, Haas J, Schwede TQMEANDisCo - distance constraints applied on model quality estimation.Bioinformatics 36, 1765-1771. (2020)3169731210.1093/bioinformatics/btz828
- Bertoni M, Kiefer F, Biasini M, Bordoli L, Schwede TModeling protein quaternary structure of homo- and hetero-oligomers beyond binary interactions by homology.Scientific Reports 7. (2017)2887468910.1038/s41598-017-09654-8
Results
The SWISS-MODEL template library (SMTL version 2023-05-05, PDB release 2023-04-28) was searched with for evolutionary related structures matching the target sequence in Table T1. For details on the template search, see Materials and Methods. Overall 487 templates were found (Table T2).
Models
The following models were built (see Materials and Methods "Model Building"):
Model #04 |
File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global |
|---|---|---|---|---|---|---|
|
PDB | ProMod3 3.3.0 | homo-hexamer (matching prediction) |
6 x U5P: URIDINE-5'-MONOPHOSPHATE;
|
0.94 | 0.87 ± 0.05 |
|
|
| Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description |
|---|---|---|---|---|---|---|---|---|---|---|
| 6wlc.1.A | 100.00 | homo-hexamer | 0.92 | HHblits | X-ray | 1.82Å | 0.61 | 1 - 346 | 1.00 | Uridylate-specific endoribonuclease |
Included Ligands
| Ligand | Description |
|---|---|
| 6 x U5P | URIDINE-5'-MONOPHOSPHATE |
Excluded ligands
| Ligand Name.Number | Reason for Exclusion | Description |
|---|---|---|
| ACT.4 | Not biologically relevant. | ACETATE ION |
| ACT.15 | Not biologically relevant. | ACETATE ION |
| ACT.17 | Not biologically relevant. | ACETATE ION |
| ACT.18 | Not biologically relevant. | ACETATE ION |
| ACT.25 | Not biologically relevant. | ACETATE ION |
| ACT.36 | Not biologically relevant. | ACETATE ION |
| ACT.38 | Not biologically relevant. | ACETATE ION |
| ACT.39 | Not biologically relevant. | ACETATE ION |
| ACT.46 | Not biologically relevant. | ACETATE ION |
| ACT.57 | Not biologically relevant. | ACETATE ION |
| ACT.59 | Not biologically relevant. | ACETATE ION |
| ACT.60 | Not biologically relevant. | ACETATE ION |
| EDO.3 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.5 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.6 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.7 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.8 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.9 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.13 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.14 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.16 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.21 | Not in contact with model. | 1,2-ETHANEDIOL |
| EDO.24 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.26 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.27 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.28 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.29 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.30 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.34 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.35 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.37 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.42 | Not in contact with model. | 1,2-ETHANEDIOL |
| EDO.45 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.47 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.48 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.49 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.50 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.51 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.55 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.56 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.58 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.63 | Not in contact with model. | 1,2-ETHANEDIOL |
| FMT.19 | Not biologically relevant. | FORMIC ACID |
| FMT.20 | Not in contact with model. | FORMIC ACID |
| FMT.40 | Not biologically relevant. | FORMIC ACID |
| FMT.41 | Not in contact with model. | FORMIC ACID |
| FMT.61 | Not biologically relevant. | FORMIC ACID |
| FMT.62 | Not in contact with model. | FORMIC ACID |
| SO4.10 | Not biologically relevant. | SULFATE ION |
| SO4.31 | Not biologically relevant. | SULFATE ION |
| SO4.52 | Not biologically relevant. | SULFATE ION |
| TRS.2 | Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL |
| TRS.12 | Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL |
| TRS.23 | Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL |
| TRS.33 | Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL |
| TRS.44 | Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL |
| TRS.54 | Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL |
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6wlc.1.A SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6wlc.1.A ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6wlc.1.A SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6wlc.1.A SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6wlc.1.A TIDYTEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6wlc.1.F SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6wlc.1.F ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6wlc.1.F SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6wlc.1.F SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6wlc.1.F TIDYTEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6wlc.1.E SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6wlc.1.E ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6wlc.1.E SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6wlc.1.E SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6wlc.1.E TIDYTEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6wlc.1.F SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6wlc.1.F ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6wlc.1.F SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6wlc.1.F SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6wlc.1.F TIDYTEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6wlc.1.E SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6wlc.1.E ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6wlc.1.E SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6wlc.1.E SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6wlc.1.E TIDYTEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6wlc.1.F SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6wlc.1.F ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6wlc.1.F SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6wlc.1.F SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6wlc.1.F TIDYTEISFMLWCKDGHVETFYPKLQ
Model #02 |
File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global |
|---|---|---|---|---|---|---|
|
PDB | ProMod3 3.3.0 | homo-hexamer (matching prediction) |
None
|
0.94 | 0.86 ± 0.05 |
|
|
| Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description |
|---|---|---|---|---|---|---|---|---|---|---|
| 6w01.1.A | 100.00 | homo-hexamer | 0.92 | HHblits | X-ray | 1.90Å | 0.61 | 1 - 345 | 1.00 | Uridylate-specific endoribonuclease |
Excluded ligands
| Ligand Name.Number | Reason for Exclusion | Description |
|---|---|---|
| CIT.12 | Not biologically relevant. | CITRIC ACID |
| CIT.22 | Not biologically relevant. | CITRIC ACID |
| CIT.39 | Not biologically relevant. | CITRIC ACID |
| CIT.49 | Not biologically relevant. | CITRIC ACID |
| CIT.66 | Not biologically relevant. | CITRIC ACID |
| CIT.76 | Not biologically relevant. | CITRIC ACID |
| EDO.1 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.2 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.3 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.4 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.7 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.8 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.9 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.10 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.11 | Not in contact with model. | 1,2-ETHANEDIOL |
| EDO.13 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.14 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.15 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.16 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.17 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.18 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.19 | Not in contact with model. | 1,2-ETHANEDIOL |
| EDO.20 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.21 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.23 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.24 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.26 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.27 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.28 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.29 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.30 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.31 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.34 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.35 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.36 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.37 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.38 | Not in contact with model. | 1,2-ETHANEDIOL |
| EDO.40 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.41 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.42 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.43 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.44 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.45 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.46 | Not in contact with model. | 1,2-ETHANEDIOL |
| EDO.47 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.48 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.50 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.51 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.53 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.54 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.55 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.56 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.57 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.58 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.61 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.62 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.63 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.64 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.65 | Not in contact with model. | 1,2-ETHANEDIOL |
| EDO.67 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.68 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.69 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.70 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.71 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.72 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.73 | Not in contact with model. | 1,2-ETHANEDIOL |
| EDO.74 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.75 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.77 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.78 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.80 | Not biologically relevant. | 1,2-ETHANEDIOL |
| EDO.81 | Not biologically relevant. | 1,2-ETHANEDIOL |
| PEG.5 | Not biologically relevant. | DI(HYDROXYETHYL)ETHER |
| PEG.6 | Not biologically relevant. | DI(HYDROXYETHYL)ETHER |
| PEG.25 | Not biologically relevant. | DI(HYDROXYETHYL)ETHER |
| PEG.32 | Not biologically relevant. | DI(HYDROXYETHYL)ETHER |
| PEG.33 | Not biologically relevant. | DI(HYDROXYETHYL)ETHER |
| PEG.52 | Not biologically relevant. | DI(HYDROXYETHYL)ETHER |
| PEG.59 | Not biologically relevant. | DI(HYDROXYETHYL)ETHER |
| PEG.60 | Not biologically relevant. | DI(HYDROXYETHYL)ETHER |
| PEG.79 | Not biologically relevant. | DI(HYDROXYETHYL)ETHER |
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6w01.1.A SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6w01.1.A ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6w01.1.A SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6w01.1.A SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6w01.1.A TIDYTEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6w01.1.F SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6w01.1.F ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6w01.1.F SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6w01.1.F SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6w01.1.F TIDYTEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6w01.1.E SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6w01.1.E ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6w01.1.E SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6w01.1.E SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6w01.1.E TIDYTEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6w01.1.F SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6w01.1.F ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6w01.1.F SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6w01.1.F SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6w01.1.F TIDYTEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6w01.1.E SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6w01.1.E ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6w01.1.E SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6w01.1.E SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6w01.1.E TIDYTEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
6w01.1.F SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
6w01.1.F ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
6w01.1.F SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
6w01.1.F SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
6w01.1.F TIDYTEISFMLWCKDGHVETFYPKLQ
Model #01 |
File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global |
|---|---|---|---|---|---|---|
|
PDB | ProMod3 3.3.0 | homo-hexamer (matching prediction) |
None
|
0.92 | 0.85 ± 0.05 |
|
|
| Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description |
|---|---|---|---|---|---|---|---|---|---|---|
| 2h85.1.A | 88.12 | homo-hexamer | 0.87 | HHblits | X-ray | 2.60Å | 0.58 | 1 - 345 | 1.00 | Putative orf1ab polyprotein |
The template contained no ligands.
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2h85.1.A SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2h85.1.A ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2h85.1.A SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2h85.1.A SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCGCSVIDLLLGDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2h85.1.A TIDYAEISFMLWCKDGHVETFYPKL-
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2h85.1.F SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2h85.1.F ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2h85.1.F SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2h85.1.F SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCGCSVIDLLLGDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2h85.1.F TIDYAEISFMLWCKDGHVETFYPKL-
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2h85.1.F SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2h85.1.F ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2h85.1.F SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2h85.1.F SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCGCSVIDLLLGDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2h85.1.F TIDYAEISFMLWCKDGHVETFYPKL-
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2h85.1.F SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2h85.1.F ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2h85.1.F SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2h85.1.F SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCGCSVIDLLLGDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2h85.1.F TIDYAEISFMLWCKDGHVETFYPKL-
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2h85.1.F SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2h85.1.F ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2h85.1.F SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2h85.1.F SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCGCSVIDLLLGDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2h85.1.F TIDYAEISFMLWCKDGHVETFYPKL-
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2h85.1.F SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2h85.1.F ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2h85.1.F SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2h85.1.F SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCGCSVIDLLLGDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2h85.1.F TIDYAEISFMLWCKDGHVETFYPKL-
Model #03 |
File | Built with | Oligo-State | Ligands | GMQE | QMEANDisCo Global |
|---|---|---|---|---|---|---|
|
PDB | ProMod3 3.3.0 | homo-hexamer (matching prediction) |
None
|
0.91 | 0.84 ± 0.05 |
|
|
| Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Range | Coverage | Description |
|---|---|---|---|---|---|---|---|---|---|---|
| 2rhb.1.A | 88.44 | homo-hexamer | 0.88 | HHblits | X-ray | 2.80Å | 0.58 | 1 - 344 | 1.00 | Uridylate-specific endoribonuclease |
The template contained no ligands.
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2rhb.1.A SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2rhb.1.A ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2rhb.1.A SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEAIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2rhb.1.A SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2rhb.1.A TIDYAEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2rhb.1.B SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2rhb.1.B ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2rhb.1.B SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEAIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2rhb.1.B SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2rhb.1.B TIDYAEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2rhb.1.C SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2rhb.1.C ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2rhb.1.C SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEAIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2rhb.1.C SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2rhb.1.C TIDYAEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2rhb.1.D SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2rhb.1.D ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2rhb.1.D SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEAIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2rhb.1.D SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2rhb.1.D TIDYAEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2rhb.1.E SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2rhb.1.E ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2rhb.1.E SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEAIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2rhb.1.E SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2rhb.1.E TIDYAEISFMLWCKDGHVETFYPKLQ
Target SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIA
2rhb.1.F SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIA
Target ANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQA
2rhb.1.F ANTVIWDYKREAPAHVSTIGVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQA
Target SLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDF
2rhb.1.F SVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDLEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEAIVYGDF
Target SHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
2rhb.1.F SHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVISKVVKV
Target TIDYTEISFMLWCKDGHVETFYPKLQ
2rhb.1.F TIDYAEISFMLWCKDGHVETFYPKLQ
Materials and Methods
Template Search
Template search with has been performed against the SWISS-MODEL template library (SMTL, last update: 2023-05-05, last included PDB release: 2023-04-28).
Model Building
Models are built based on the target-template alignment using ProMod3 (Studer et al.). Coordinates which are conserved between the target and the template are copied from the template to the model. Insertions and deletions are remodelled using a fragment library. Side chains are then rebuilt. Finally, the geometry of the resulting model is regularized by using a force field.
Model Quality Estimation
The global and per-residue model quality has been assessed using the QMEAN scoring function (Studer et al.).
Ligand Modelling
Ligands present in the template structure are transferred by homology to the model when the following criteria are met: (a) The ligands are annotated as biologically relevant in the template library, (b) the ligand is in contact with the model, (c) the ligand is not clashing with the protein, (d) the residues in contact with the ligand are conserved between the target and the template. If any of these four criteria is not satisfied, a certain ligand will not be included in the model. The model summary includes information on why and which ligand has not been included.
Oligomeric State Conservation
The quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. The method (Bertoni et al.) is based on a supervised machine learning algorithm, Support Vector Machines (SVM), which combines interface conservation, structural clustering, and other template features to provide a quaternary structure quality estimate (QSQE). The QSQE score is a number between 0 and 1, reflecting the expected accuracy of the interchain contacts for a model built based a given alignment and template. Higher numbers indicate higher reliability. This complements the GMQE score which estimates the accuracy of the tertiary structure of the resulting model.
References
- Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, Bealer K, Madden TLBLAST+: architecture and applications.BMC Bioinformatics, 10, 421-430. (2009)2000350010.1186/1471-2105-10-421
- Steinegger M, Meier M, Mirdita M, Vöhringer H, Haunsberger SJ, Söding JHH-suite3 for fast remote homology detection and deep protein annotation.BMC Bioinformatics 20, 473. (2019)3152111010.1186/s12859-019-3019-7
Table T1:
Primary amino acid sequence for which templates were searched and models were built.
SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG
VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL
QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD
DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ
VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL
QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD
DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ
Table T2:
| Template | Seq Identity | Oligo-state | QSQE | Found by | Method | Resolution | Seq Similarity | Coverage | Description |
|---|---|---|---|---|---|---|---|---|---|
| 6wlc.1.A | 100.00 | homo-hexamer | 0.92 | HHblits | X-ray | 1.82Å | 0.61 | 1.00 | Uridylate-specific endoribonuclease |
| 6w01.1.A | 100.00 | homo-hexamer | 0.92 | HHblits | X-ray | 1.90Å | 0.61 | 1.00 | Uridylate-specific endoribonuclease |
| 5s6x.1.A | 100.00 | homo-hexamer | 0.89 | HHblits | X-ray | 2.32Å | 0.61 | 1.00 | Uridylate-specific endoribonuclease |
| 5s6x.1.B | 100.00 | homo-hexamer | 0.89 | HHblits | X-ray | 2.32Å | 0.61 | 1.00 | Uridylate-specific endoribonuclease |
| 7k9p.1.E | 100.00 | homo-hexamer | 0.88 | HHblits | X-ray | 2.60Å | 0.61 | 1.00 | Uridylate-specific endoribonuclease |
| 7k9p.1.D | 100.00 | homo-hexamer | 0.88 | HHblits | X-ray | 2.60Å | 0.61 | 1.00 | Uridylate-specific endoribonuclease |
| 7k9p.1.F | 100.00 | homo-hexamer | 0.88 | HHblits | X-ray | 2.60Å | 0.61 | 1.00 | Uridylate-specific endoribonuclease |
| 7k9p.1.A | 100.00 | homo-hexamer | 0.87 | HHblits | X-ray | 2.60Å | 0.61 | 1.00 | Uridylate-specific endoribonuclease |
| 7k9p.1.B | 100.00 | homo-hexamer | 0.87 | HHblits | X-ray | 2.60Å | 0.61 | 1.00 | Uridylate-specific endoribonuclease |
| 7k9p.1.C | 100.00 | homo-hexamer | 0.87 | HHblits | X-ray | 2.60Å | 0.61 | 1.00 | Uridylate-specific endoribonuclease |
| 2rhb.1.A | 88.44 | homo-hexamer | 0.88 | HHblits | X-ray | 2.80Å | 0.58 | 1.00 | Uridylate-specific endoribonuclease |
| 2h85.1.A | 88.12 | homo-hexamer | 0.87 | HHblits | X-ray | 2.60Å | 0.58 | 1.00 | Putative orf1ab polyprotein |
| 2ozk.1.A | 88.73 | homo-tetramer | 0.59 | HHblits | X-ray | 2.90Å | 0.58 | 1.00 | Uridylate-specific endoribonuclease |
| 2ozk.1.C | 88.73 | homo-tetramer | 0.57 | HHblits | X-ray | 2.90Å | 0.58 | 1.00 | Uridylate-specific endoribonuclease |
| 2ozk.1.D | 88.73 | homo-tetramer | 0.58 | HHblits | X-ray | 2.90Å | 0.58 | 1.00 | Uridylate-specific endoribonuclease |
The table above shows the top 15 filtered templates. A further 464 templates were found which were considered to be less suitable for modelling than the filtered list.
2c1w.1.A, 2c1w.2.A, 2c1w.3.A, 2gth.1.A, 2gti.1.A, 4rs4.1.A, 4rs4.1.B, 4s1t.1.A, 5da1.1.A, 5da1.1.B, 5eyi.1.A, 5eyi.1.B, 5f17.1.A, 5f17.1.B, 5hbz.1.A, 5hbz.1.B, 5hc1.1.A, 5hc1.1.B, 5hc1.2.A, 5hc1.2.B, 5rl6.1.A, 5rl6.2.A, 5rl7.1.A, 5rl7.2.A, 5rl8.1.A, 5rl8.2.A, 5rl9.1.A, 5rl9.2.A, 5rlb.1.A, 5rlb.2.A, 5rlc.1.A, 5rlc.2.A, 5rld.1.A, 5rld.2.A, 5rle.1.A, 5rle.2.A, 5rlf.1.A, 5rlf.2.A, 5rlg.1.A, 5rlg.2.A, 5rlh.1.A, 5rlh.2.A, 5rli.1.A, 5rli.2.A, 5rlj.1.A, 5rlj.2.A, 5rlk.1.A, 5rlk.2.A, 5rll.1.A, 5rll.2.A, 5rlm.1.A, 5rlm.2.A, 5rln.1.A, 5rln.2.A, 5rlo.1.A, 5rlo.2.A, 5rlp.1.A, 5rlp.2.A, 5rlq.1.A, 5rlq.2.A, 5rlr.1.A, 5rlr.2.A, 5rls.1.A, 5rls.2.A, 5rlt.1.A, 5rlt.2.A, 5rlu.1.A, 5rlu.2.A, 5rlv.1.A, 5rlv.2.A, 5rlw.1.A, 5rlw.2.A, 5rly.1.A, 5rly.2.A, 5rlz.1.A, 5rlz.2.A, 5rm0.1.A, 5rm0.2.A, 5rm1.1.A, 5rm1.2.A, 5rm2.1.A, 5rm2.2.A, 5rm3.1.A, 5rm3.2.A, 5rm4.1.A, 5rm4.2.A, 5rm5.1.A, 5rm5.2.A, 5rm6.1.A, 5rm6.2.A, 5rm7.1.A, 5rm7.2.A, 5rm8.1.A, 5rm8.2.A, 5rm9.1.A, 5rm9.2.A, 5rma.1.A, 5rma.2.A, 5rmb.1.A, 5rmb.2.A, 5rmc.1.A, 5rmc.2.A, 5rmd.1.A, 5rmd.2.A, 5rme.1.A, 5rme.2.A, 5rmf.1.A, 5rmf.2.A, 5rmg.1.A, 5rmg.2.A, 5rmh.1.A, 5rmh.2.A, 5rmi.1.A, 5rmi.2.A, 5rmj.1.A, 5rmj.2.A, 5rmk.1.A, 5rmk.2.A, 5rml.1.A, 5rml.2.A, 5rmm.1.A, 5rmm.2.A, 5rob.1.A, 5rob.2.A, 5s6x.1.C, 5s6x.1.D, 5s6x.1.E, 5s6x.1.F, 5s6y.1.A, 5s6y.1.B, 5s6y.1.C, 5s6y.1.D, 5s6y.1.E, 5s6y.1.F, 5s6z.1.A, 5s6z.1.B, 5s6z.1.C, 5s6z.1.D, 5s6z.1.E, 5s6z.1.F, 5s70.1.A, 5s70.1.B, 5s70.1.C, 5s70.1.D, 5s70.1.E, 5s70.1.F, 5s71.1.A, 5s71.1.B, 5s71.1.C, 5s71.1.D, 5s71.1.E, 5s71.1.F, 5s72.1.A, 5s72.1.B, 5s72.1.C, 5s72.1.D, 5s72.1.E, 5s72.1.F, 5sa4.1.A, 5sa4.1.B, 5sa4.1.C, 5sa4.1.D, 5sa4.1.E, 5sa4.1.F, 5sa5.1.A, 5sa5.1.B, 5sa5.1.C, 5sa5.1.D, 5sa5.1.E, 5sa5.1.F, 5sa6.1.A, 5sa6.1.B, 5sa6.1.C, 5sa6.1.D, 5sa6.1.E, 5sa6.1.F, 5sa7.1.A, 5sa7.1.B, 5sa7.1.C, 5sa7.1.D, 5sa7.1.E, 5sa7.1.F, 5sa8.1.A, 5sa8.1.B, 5sa8.1.C, 5sa8.1.D, 5sa8.1.E, 5sa8.1.F, 5sa9.1.A, 5sa9.1.B, 5sa9.1.C, 5sa9.1.D, 5sa9.1.E, 5sa9.1.F, 5saa.1.A, 5saa.1.B, 5saa.1.C, 5saa.1.D, 5saa.1.E, 5saa.1.F, 5sab.1.A, 5sab.1.B, 5sab.1.C, 5sab.1.D, 5sab.1.E, 5sab.1.F, 5sac.1.A, 5sac.1.B, 5sac.1.C, 5sac.1.D, 5sac.1.E, 5sac.1.F, 5sad.1.A, 5sad.1.B, 5sad.1.C, 5sad.1.D, 5sad.1.E, 5sad.1.F, 5sae.1.A, 5sae.1.B, 5sae.1.C, 5sae.1.D, 5sae.1.E, 5sae.1.F, 5saf.1.A, 5saf.1.B, 5saf.1.C, 5saf.1.D, 5saf.1.E, 5saf.1.F, 5sag.1.A, 5sag.1.B, 5sag.1.C, 5sag.1.D, 5sag.1.E, 5sag.1.F, 5sah.1.A, 5sah.1.B, 5sah.1.C, 5sah.1.D, 5sah.1.E, 5sah.1.F, 5sai.1.A, 5sai.1.B, 5sai.1.C, 5sai.1.D, 5sai.1.E, 5sai.1.F, 5sbf.1.A, 5sbf.1.B, 5sbf.1.C, 5sbf.1.D, 5sbf.1.E, 5sbf.1.F, 5wwp.1.A, 5wwp.2.A, 5yvd.1.A, 6jyt.1.A, 6jyt.2.A, 6vww.1.A, 6vww.1.B, 6vww.1.C, 6vww.1.D, 6vww.1.E, 6vww.1.F, 6w01.1.B, 6w01.1.C, 6w01.1.D, 6w01.1.E, 6w01.1.F, 6wlc.1.B, 6wlc.1.C, 6wlc.1.D, 6wlc.1.E, 6wlc.1.F, 6wxc.1.A, 6wxc.1.B, 6wxc.1.C, 6wxc.1.D, 6wxc.1.E, 6wxc.1.F, 6x1b.1.A, 6x1b.1.B, 6x1b.1.C, 6x1b.1.D, 6x1b.1.E, 6x1b.1.F, 6x4i.1.A, 6x4i.1.B, 6x4i.1.C, 6x4i.1.D, 6x4i.1.E, 6x4i.1.F, 6xdh.1.A, 6xdh.1.B, 6xdh.1.C, 6xdh.2.A, 6xdh.2.B, 6xdh.2.C, 6xez.1.E, 6xez.1.F, 6zsl.1.A, 6zsl.2.A, 7cxm.1.G, 7cxm.1.H, 7cxn.1.G, 7cxn.1.H, 7cyq.1.G, 7cyq.1.H, 7egq.1.E, 7egq.1.M, 7egq.1.Q, 7egq.1.R, 7eiz.1.J, 7eiz.1.K, 7k0r.1.A, 7k0r.1.B, 7k0r.1.C, 7k0r.1.D, 7k0r.1.E, 7k0r.1.F, 7k1l.1.A, 7k1l.1.B, 7k1l.1.C, 7k1l.1.D, 7k1l.1.E, 7k1l.1.F, 7k1o.1.A, 7k1o.1.B, 7k1o.1.C, 7k1o.1.D, 7k1o.1.E, 7k1o.1.F, 7keg.1.A, 7keg.1.B, 7keg.1.C, 7keg.1.D, 7keg.1.E, 7keg.1.F, 7keh.1.A, 7keh.1.B, 7keh.1.C, 7keh.1.D, 7keh.1.E, 7keh.1.F, 7kf4.1.A, 7kf4.1.B, 7kf4.1.C, 7kf4.1.D, 7kf4.1.E, 7kf4.1.F, 7krn.1.E, 7kro.1.E, 7kro.1.F, 7me0.1.A, 7me0.1.B, 7me0.1.C, 7me0.1.D, 7me0.1.E, 7me0.1.F, 7n06.1.A, 7n06.1.B, 7n06.1.C, 7n06.1.D, 7n06.1.E, 7n06.1.F, 7n33.1.A, 7n33.1.B, 7n33.1.C, 7n33.1.D, 7n33.1.E, 7n33.1.F, 7n7r.1.A, 7n7r.1.B, 7n7r.1.C, 7n7r.1.D, 7n7r.1.E, 7n7r.1.F, 7n7u.1.A, 7n7u.1.B, 7n7u.1.C, 7n7u.1.D, 7n7u.1.E, 7n7u.1.F, 7n7w.1.A, 7n7w.1.B, 7n7w.1.C, 7n7w.1.D, 7n7w.1.E, 7n7w.1.F, 7n7y.1.A, 7n7y.1.B, 7n7y.1.C, 7n7y.1.D, 7n7y.1.E, 7n7y.1.F, 7n83.1.A, 7n83.1.B, 7n83.1.C, 7n83.1.D, 7n83.1.E, 7n83.1.F, 7nio.1.A, 7nio.1.B, 7nn0.1.A, 7nn0.2.A, 7nn0.3.A, 7nn0.4.A, 7nng.1.A, 7nng.2.A, 7rb0.1.A, 7rb0.1.B, 7rb0.1.C, 7rb0.1.D, 7rb0.1.E, 7rb0.1.F, 7rb2.1.A, 7rb2.1.B, 7rb2.1.C, 7rb2.1.D, 7rb2.1.E, 7rb2.1.F, 7rdx.1.E, 7rdx.1.F, 7rdy.1.E, 7rdy.1.F, 7rdz.1.E, 7rdz.1.F, 7re0.1.E, 7re0.1.F, 7re1.1.E, 7re1.1.F, 7re2.1.E, 7re3.1.E, 7re3.1.F, 7re3.1.M, 7re3.1.N, 7tj2.1.A, 7tj2.1.B, 7tj2.1.C, 7tj2.1.D, 7tj2.1.E, 7tj2.1.F, 7tqv.1.A, 7tqv.1.B, 7tqv.1.C, 7tqv.1.D, 7tqv.1.E, 7tqv.1.F, 8g6r.1.A, 8gwb.1.G, 8gwb.1.H, 8gwe.1.G, 8gwe.1.H, 8gwf.1.G, 8gwf.1.H, 8gwg.1.G, 8gwg.1.H, 8gwi.1.G, 8gwi.1.H, 8gwn.1.G, 8gwn.1.H, 8gwo.1.G, 8gwo.1.H