------------------------------------------------------------------------------- Project: Spike glycoprotein / ACE2_HUMAN hetero-oligomeric complex | P0DTC2, Q9BYF1 --------------------------------- HLkhkP ---------------------------------- ------------------------------------------------------------------------------- ------------------------------ meld02.stdout ------------------------------ ProMod3: Version 3.3.0 ProMod3: Starting modelling based on a raw model. ProMod3: Removed 10 terminal gap(s). ProMod3: Trying to close small deletions (no. of gap(s): 21). ProMod3: Trying to merge 21 gap(s) with distance 0. ProMod3: Trying to fill 21 gap(s) by database. ProMod3: Resolved A.HIS69-(VSGTNGT)-A.LYS77 by filling A.HIS69-(VSGTNGTK)-A.ARG78 (200 candidates, BB_DB) ProMod3: Resolved A.TYR145-(HKNNKSW)-A.MET153 by filling A.TYR145-(HKNNKSW)-A.MET153 (557 candidates, BB_DB) ProMod3: Resolved A.LEU176-(MDLEGKQG)-A.ASN185 by filling A.LEU176-(MDLEGKQG)-A.ASN185 (104 candidates, BB_DB) ProMod3: Resolved A.SER247-(YLTPGDSSS)-A.GLY257 by filling A.SER247-(YLTPGDSSS)-A.GLY257 (45 candidates, BB_DB) ProMod3: Resolved B.HIS69-(VSGTNGT)-B.LYS77 by filling B.HIS69-(VSGTNGTK)-B.ARG78 (221 candidates, BB_DB) ProMod3: Resolved B.TYR145-(HKNNKSW)-B.MET153 by filling B.TYR145-(HKNNKSW)-B.MET153 (795 candidates, BB_DB) ProMod3: Resolved B.LEU176-(MDLEGKQG)-B.ASN185 by filling B.LEU176-(MDLEGKQG)-B.ASN185 (74 candidates, BB_DB) ProMod3: Resolved B.SER247-(YLTPGDSSS)-B.GLY257 by filling B.SER247-(YLTPGDSSS)-B.GLY257 (55 candidates, BB_DB) ProMod3: Resolved C.HIS69-(VSGTNGT)-C.LYS77 by filling C.HIS69-(VSGTNGT)-C.LYS77 (75 candidates, BB_DB) ProMod3: Resolved C.TYR145-(HKNNKSW)-C.MET153 by filling C.TYR145-(HKNNKSW)-C.MET153 (391 candidates, BB_DB) ProMod3: Resolved C.LEU176-(MDLEGKQG)-C.ASN185 by filling C.LEU176-(MDLEGKQG)-C.ASN185 (120 candidates, BB_DB) ProMod3: Resolved C.SER247-(YLTPGDSSS)-C.GLY257 by filling C.SER247-(YLTPGDSSS)-C.GLY257 (129 candidates, BB_DB) ProMod3: Trying to merge 9 gap(s) with distance 1. ProMod3: Trying to fill 9 gap(s) by database. ProMod3: Trying to merge 9 gap(s) with distance 2. ProMod3: Trying to fill 9 gap(s) by database. ProMod3: Trying to merge 9 gap(s) with distance 3. ProMod3: Trying to fill 9 gap(s) by database. ProMod3: Trying to fill 9 gap(s) by database. ProMod3: Trying to fill 9 gap(s) by database. ProMod3: Trying to fill 9 gap(s) by Monte Carlo. ProMod3: Resolved A.VAL620-(PVAIHADQLTPTWRVYSTGS)-A.ASN641 by filling A.VAL620-(PVAIHADQLTPTWRVYSTGS)-A.ASN641 (6 candidates, BB) ProMod3: Resolved A.GLN675-(TQTNSPRRARSVASQ)-A.SER691 by filling A.TYR674-(QTQTNSPRRARSVASQ)-A.SER691 (6 candidates, BB) ProMod3: Resolved A.THR827-(LADAGFIKQYGDCLGDIAARDLICAQKF)-A.ASN856 by filling A.VAL826-(TLADAGFIKQYGDCLGDIAARDLICAQKF)-A.ASN856 (6 candidates, BB) ProMod3: Resolved B.VAL620-(PVAIHADQLTPTWRVYSTGS)-B.ASN641 by filling B.VAL620-(PVAIHADQLTPTWRVYSTGS)-B.ASN641 (6 candidates, BB) ProMod3: Resolved B.GLN675-(TQTNSPRRARSVASQ)-B.SER691 by filling B.TYR674-(QTQTNSPRRARSVASQ)-B.SER691 (6 candidates, BB) ProMod3: Resolved B.THR827-(LADAGFIKQYGDCLGDIAARDLICAQKF)-B.ASN856 by filling B.THR827-(LADAGFIKQYGDCLGDIAARDLICAQKFN)-B.GLY857 (6 candidates, BB) ProMod3: Resolved C.VAL620-(PVAIHADQLTPTWRVYSTGS)-C.ASN641 by filling C.GLU619-(VPVAIHADQLTPTWRVYSTGS)-C.ASN641 (6 candidates, BB) ProMod3: Resolved C.GLN675-(TQTNSPRRARSVASQ)-C.SER691 by filling C.TYR674-(QTQTNSPRRARSVASQ)-C.SER691 (6 candidates, BB) ProMod3: Resolved C.THR827-(LADAGFIKQYGDCLGDIAARDLICAQKF)-C.ASN856 by filling C.VAL826-(TLADAGFIKQYGDCLGDIAARDLICAQKF)-C.ASN856 (6 candidates, BB) ProMod3: Rebuilding sidechains. ProMod3: Minimize energy. ------------------------------ meld02.stderr ------------------------------ Trying to build hetero-3-2-mer from hetero-3-2-mer