------------------------------------------------------------------------------- Project: RNA-directed RNA polymerase nsp12 (Pol) | P0DTD1 PRO_0000449629 - --------------------------------- JDUya4 ---------------------------------- ------------------------------------------------------------------------------- ------------------------------ meld02.stdout ------------------------------ ProMod3: Version 3.3.0 ProMod3: Starting modelling based on a raw model. ProMod3: Removed 1 terminal gap(s). ProMod3: Trying to close small deletions (no. of gap(s): 4). ProMod3: Trying to merge 4 gap(s) with distance 0. ProMod3: Trying to fill 4 gap(s) by database. ProMod3: Resolved A.ARG74-(H)-A.THR76 by filling A.VAL72-(KRHT)-A.PHE77 (40 candidates, BB_DB) ProMod3: Resolved A.PHE102-(KFRIDGDMV)-A.PRO112 by filling A.PHE101-(FKFRIDGDMVP)-A.HIS113 (40 candidates, BB_DB) ProMod3: Trying to merge 2 gap(s) with distance 1. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to merge 2 gap(s) with distance 2. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to merge 2 gap(s) with distance 3. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to fill 2 gap(s) by database. ProMod3: Trying to fill 2 gap(s) by Monte Carlo. ProMod3: Resolved A.LYS50-(TNCCRFQEKDEDDNLIDS)-A.TYR69 by filling A.LYS50-(TNCCRFQEKDEDDNLIDSY)-A.PHE70 (6 candidates, BB) ProMod3: Resolved A.LEU895-(TGHMLDMYSVMLTND)-A.ASN911 by filling A.GLU894-(LTGHMLDMYSVMLTND)-A.ASN911 (6 candidates, BB) ProMod3: Rebuilding sidechains. ProMod3: Minimize energy. ------------------------------ meld02.stderr ------------------------------ Trying to build monomer from hetero-1-1-2-mer