RNA-directed RNA polymerase nsp12 (Pol) | P0DTD1 PRO_0000449629

Created: May 5, 2023, 9:33 p.m. at 21:33

Models Name Description GMQE QSQE Seq Id Coverage Range Method Resolution Oligo-state Ligands Found by Seq Similarity
7aap.1.A
Non-structural protein 12
Nsp7-Nsp8-Nsp12 SARS-CoV2 RNA-dependent RNA polymerase in complex with template:primer dsRNA and favipiravir-RTP
 0.87 0.00 100.00 1.00 1-932 EM 0.00 monomer 2 x ZN, 2 x MG, 1 x POP, 1 x GE6 HHblits 0.63
7krn.1.A
RNA-directed RNA polymerase
Structure of SARS-CoV-2 backtracked complex bound to nsp13 helicase - nsp13(1)-BTC
 0.87 0.00 100.00 1.00 1-932 EM 0.00 monomer 5 x ZN, 2 x MG, 2 x ADP, 3 x 1N7, 1 x AF3 HHblits 0.63
7kro.1.A
RNA-directed RNA polymerase
Structure of SARS-CoV-2 backtracked complex complex bound to nsp13 helicase - nsp13(2)-BTC
 0.87 0.00 100.00 1.00 1-932 EM 0.00 monomer 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3 HHblits 0.63
7krp.1.A
RNA-directed RNA polymerase
Structure of SARS-CoV-2 backtracked complex complex bound to nsp13 helicase - BTC (local refinement)
 0.88 0.00 100.00 1.00 1-932 EM 0.00 monomer 2 x ZN, 1 x MG, 1 x ADP, 3 x 1N7 HHblits 0.63
7re3.1.J
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer
 0.87 0.71 100.00 1.00 1-932 EM 0.00 homo-dimer 16 x ZN, 6 x MG, 6 x ADP, 4 x AF3, 2 x 1N7 HHblits 0.63
7re1.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC (composite)
 0.88 0.00 100.00 1.00 1-932 EM 0.00 monomer 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3 HHblits 0.63
7rdx.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - open class
 0.88 0.00 100.00 1.00 1-932 EM 0.00 monomer 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3 HHblits 0.63
7rdz.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - apo class
 0.88 0.00 100.00 1.00 1-932 EM 0.00 monomer 8 x ZN, 1 x MG, 1 x ADP HHblits 0.63
7re3.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer
 0.87 100.00 1.00 1-932 EM 0.00 hetero-2-4-2-4-mer 16 x ZN, 6 x MG, 6 x ADP, 4 x AF3, 2 x 1N7 HHblits 0.63
7rdy.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - engaged class
 0.88 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-mer 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3 HHblits 0.63
7re0.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - swiveled class
 0.88 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-mer 8 x ZN, 3 x MG, 3 x ADP, 2 x AF3 HHblits 0.63
7re2.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(1)-RTC
 0.88 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-1-mer 5 x ZN, 2 x MG, 2 x ADP, 3 x 1N7, 1 x AF3 HHblits 0.63
6xez.1.A
RNA-directed RNA polymerase
Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC
 0.85 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-mer 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3 HHblits 0.63
7egq.1.I
RNA-directed RNA polymerase
Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading
 0.86 100.00 1.00 1-932 EM 0.00 hetero-2-4-2-4-2-2-… 26 x ZN, 3 x MG HHblits 0.63
7egq.1.A
RNA-directed RNA polymerase
Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading
 0.86 100.00 1.00 1-932 EM 0.00 hetero-2-4-2-4-2-2-… 26 x ZN, 3 x MG HHblits 0.63
7ctt.1.A
RNA-directed RNA polymerase
Cryo-EM structure of Favipiravir bound to replicating polymerase complex of SARS-CoV-2 in the pre-catalytic state.
 0.80 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN, 1 x MG, 1 x GE6 HHblits 0.63
7ozv.1.A
Replicase polyprotein 1ab
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with G
 0.81 100.00 1.00 1-932 EM 0.00 hetero-1-1-1-mer 2 x ZN HHblits 0.63
7ozu.1.A
Replicase polyprotein 1ab
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with A
 0.81 100.00 1.00 1-932 EM 0.00 hetero-1-1-1-mer 2 x ZN HHblits 0.63
7thm.1.A
RNA-directed RNA polymerase
SARS-CoV-2 nsp12/7/8 complex with a native N-terminus nsp9
 0.86 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-1-mer 2 x ZN, 1 x MN, 1 x POP HHblits 0.63
8gwo.1.A
RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
 0.85 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-1-mer 8 x ZN, 1 x GNP HHblits 0.63
8gwb.1.A
RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
 0.87 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-1-mer 8 x ZN, 2 x MN, 1 x A-U HHblits 0.63
8gwn.1.A
RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
 0.85 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-1-mer 8 x ZN, 1 x GNP HHblits 0.63
8gwi.1.A
RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
 0.86 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-1-mer 8 x ZN, 1 x GTP HHblits 0.63
8gwg.1.A
RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
 0.86 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-1-mer 8 x ZN, 1 x GTP HHblits 0.63
8gwf.1.A
RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
 0.86 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-1-mer 8 x ZN, 1 x GTP HHblits 0.63
8gwe.1.A
RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
 0.86 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-1-mer 8 x ZN, 1 x GNP, 1 x MG, 1 x A-U-U-A HHblits 0.63
7uo4.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to Remdesivir triphosphate, in a pre-catalytic state
 0.87 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 1 x NWX, 1 x MG, 2 x ZN HHblits 0.63
7uo9.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to UTP, in a pre-catalytic state
 0.87 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN, 1 x MG, 1 x UTP HHblits 0.63
7uoe.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to CTP, in a pre-catalytic state
 0.88 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN, 2 x MG, 1 x CTP, 1 x L2B HHblits 0.63
7uo7.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to ATP, in a pre-catalytic state
 0.86 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 1 x ATP, 1 x MG, 2 x ZN HHblits 0.63
7uob.1.A
RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to GTP, in a pre-catalytic state
 0.88 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN, 3 x MG, 2 x GTP, 1 x L2B HHblits 0.63
7bv1.1.A
RNA-directed RNA polymerase
Cryo-EM structure of the apo nsp12-nsp7-nsp8 complex
 0.82 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN HHblits 0.63
✓
 7bv2.1.A
RNA-directed RNA polymerase
The nsp12-nsp7-nsp8 complex bound to the template-primer RNA and triphosphate form of Remdesivir(RTP)
 0.83 0.00 100.00 1.00 1-932 EM 0.00 monomer 2 x ZN, 1 x POP, 2 x MG, 1 x F86 HHblits 0.63
✓
 6m71.1.A
RNA-directed RNA polymerase
SARS-Cov-2 RNA-dependent RNA polymerase in complex with cofactors
 0.84 0.00 100.00 1.00 1-932 EM 0.00 monomer HHblits 0.63
7btf.1.A
RNA-directed RNA polymerase
SARS-CoV-2 RNA-dependent RNA polymerase in complex with cofactors in reduced condition
 0.87 100.00 1.00 1-932 EM 0.00 hetero-1-1-2-mer 2 x ZN HHblits 0.63
7bzf.1.A
RNA-directed RNA polymerase
COVID-19 RNA-dependent RNA polymerase post-translocated catalytic complex
 0.85 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN HHblits 0.63
7cyq.1.A
RNA-directed RNA polymerase
Cryo-EM structure of an extended SARS-CoV-2 replication and transcription complex reveals an intermediate state in cap synthesis
 0.88 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-2-1-mer 8 x ZN, 1 x GDP, 1 x MG HHblits 0.63
7c2k.1.A
RNA-directed RNA polymerase
COVID-19 RNA-dependent RNA polymerase pre-translocated catalytic complex
 0.88 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN HHblits 0.63
7dte.1.A
RNA-directed RNA polymerase
SARS-CoV-2 RdRP catalytic complex with T33-1 RNA
 0.88 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN HHblits 0.63
7dfg.1.C
RNA-directed RNA polymerase
Structure of COVID-19 RNA-dependent RNA polymerase bound to favipiravir
 0.88 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 1 x 1RP, 2 x ZN, 2 x POP, 4 x MG HHblits 0.63
7dok.1.C
RNA-directed RNA polymerase
Structure of COVID-19 RNA-dependent RNA polymerase (extended conformation) bound to penciclovir
 0.88 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 1 x HCU, 4 x MG, 2 x ZN, 2 x POP HHblits 0.63
7doi.1.A
RNA-directed RNA polymerase
Structure of COVID-19 RNA-dependent RNA polymerase bound to penciclovir.
 0.87 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN, 2 x POP, 4 x MG, 1 x HCU HHblits 0.63
7d4f.1.D
RNA-directed RNA polymerase
Structure of COVID-19 RNA-dependent RNA polymerase bound to suramin
 0.87 100.00 1.00 1-932 EM 0.00 hetero-2-1-1-mer 2 x ZN, 2 x H3U HHblits 0.63
7dfh.1.A
RNA-directed RNA polymeras
Structure of COVID-19 RNA-dependent RNA polymerase bound to ribavirin
 0.87 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN, 3 x MG, 2 x POP, 1 x RVP, 1 x G-C-U-A-U-G-U-G HHblits 0.63
6yyt.1.A
nsp12
Structure of replicating SARS-CoV-2 polymerase
 0.83 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN HHblits 0.63
7b3d.1.A
SARS-CoV-2 RNA-dependent RNA polymerase nsp12
Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with AMP at position -4 (structure 3)
 0.81 100.00 1.00 1-932 EM 0.00 hetero-1-1-1-mer 2 x ZN HHblits 0.63
7oyg.1.A
SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase
 0.81 100.00 1.00 1-932 EM 0.00 hetero-2-2-2-mer 4 x ZN HHblits 0.63
7oyg.1.F
SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase
 0.81 100.00 1.00 1-932 EM 0.00 hetero-2-2-2-mer 4 x ZN HHblits 0.63
7b3b.1.A
RNA-directed RNA polymerase nsp12
Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with Remdesivir at position -3 (structure 1)
 0.81 100.00 1.00 1-932 EM 0.00 hetero-1-1-1-mer 2 x ZN HHblits 0.63
7b3c.1.A
RNA-directed RNA polymerase nsp12
Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with Remdesivir at position -4 (structure 2)
 0.81 100.00 1.00 1-932 EM 0.00 hetero-1-1-1-mer 2 x ZN HHblits 0.63
6xqb.1.A
RNA-directed RNA polymerase
SARS-CoV-2 RdRp/RNA complex
 0.73 100.00 1.00 1-932 EM 0.00 hetero-1-2-1-mer 2 x ZN, 1 x MG, 1 x G-G-G-C-C-C-A, 1 x G-U-G-G-G-C-C-C HHblits 0.63
7ed5.1.A
RNA-directed RNA polymerase
A dual mechanism of action of AT-527 against SARS-CoV-2 polymerase
 0.87 100.00 1.00 1-932 EM 2.98 hetero-1-2-1-mer 2 x ZN, 3 x MG, 3 x AT9 BLAST 0.63
7cxm.1.A
RNA-directed RNA polymerase
Architecture of a SARS-CoV-2 mini replication and transcription complex
 0.87 99.89 1.00 1-932 EM 0.00 hetero-1-2-1-2-mer 8 x ZN, 1 x U-A-A-A-A-U HHblits 0.62
7cxn.1.A
RNA-directed RNA polymerase
Architecture of a SARS-CoV-2 mini replication and transcription complex
 0.86 99.89 1.00 1-932 EM 0.00 hetero-1-2-1-2-mer 8 x ZN, 1 x U-A-A-A-A-U HHblits 0.62
7ed5.1.A
RNA-directed RNA polymerase
A dual mechanism of action of AT-527 against SARS-CoV-2 polymerase
 0.87 100.00 1.00 2-932 EM 2.98 hetero-1-2-1-mer 2 x ZN, 3 x MG, 3 x AT9 HHblits 0.63
7eiz.1.A
RNA-directed RNA polymerase
Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading
 0.85 100.00 1.00 1-929 EM 0.00 hetero-1-2-1-1-1-1-… 13 x ZN, 1 x MG HHblits 0.63
7bw4.1.A
RNA-directed RNA polymerase
Structure of the RNA-dependent RNA polymerase from SARS-CoV-2
 0.77 100.00 0.99 10-932 EM 0.00 hetero-1-2-1-mer 2 x ZN HHblits 0.63
✓
 6nur.1.A
NSP12
SARS-Coronavirus NSP12 bound to NSP7 and NSP8 co-factors
 0.77 0.00 96.35 1.00 1-931 EM 0.00 monomer 2 x ZN HHblits 0.61
7l1f.1.A
RNA-directed RNA polymerase
SARS-CoV-2 RdRp in complex with 4 Remdesivir monophosphate
 0.71 100.00 0.96 32-929 EM 0.00 hetero-1-1-1-mer HHblits 0.63
8g6r.1.A
nsp12
Porcine epidemic diarrhea virus core polymerase complex
 0.79 60.33 0.99 4-928 EM 0.00 hetero-1-1-1-mer 2 x ZN HHblits 0.49
8g6r.1.A
nsp12
Porcine epidemic diarrhea virus core polymerase complex
 0.78 60.66 0.98 6-925 EM 0.00 hetero-1-1-1-mer 2 x ZN BLAST 0.49
2ckw.1.A
RNA-DIRECTED RNA POLYMERASE
The 2.3 A resolution structure of the Sapporo virus RNA dependant RNA polymerase.
 0.13 13.65 0.36 497-890 X-ray 2.30 monomer HHblits 0.26
2b43.1.A
non-structural polyprotein
Crystal structure of the Norwalk virus RNA dependent RNA polymerase from strain Hu/NLV/Dresden174/1997/GE
 0.12 13.43 0.36 497-891 X-ray 2.30 monomer HHblits 0.26
4lq9.1.A
RNA-dependent RNA-polymerase
Crystal structure of human norovirus RNA-dependent RNA-polymerase in complex with NAF2
 0.12 13.43 0.36 497-891 X-ray 2.04 monomer 2 x 21D, 1 x MG HHblits 0.26
4lq3.1.A
RNA-dependent RNA-polymerase
Crystal structure of human norovirus RNA-dependent RNA-polymerase bound to the inhibitor PPNDS
 0.13 13.43 0.36 497-891 X-ray 2.60 monomer 4 x 20V, 1 x MG, 1 x G-G HHblits 0.26
2uuw.1.A
RNA-DIRECTED RNA POLYMERASE
2.75 angstrom structure of the D347G D348G mutant structure of Sapporo Virus RdRp Polymerase
 0.12 13.13 0.36 497-890 X-ray 2.76 monomer HHblits 0.26
2wk4.1.A
PROTEASE-POLYMERASE P70
Dimeric structure of D347G D348G mutant of the sapporovirus RNA dependent RNA polymerase
 0.12 13.13 0.36 497-890 X-ray 2.98 homo-dimer HHblits 0.26
2wk4.1.B
PROTEASE-POLYMERASE P70
Dimeric structure of D347G D348G mutant of the sapporovirus RNA dependent RNA polymerase
 0.12 13.13 0.36 497-890 X-ray 2.98 homo-dimer HHblits 0.26
3uqs.1.A
RNA-dependent RNA polymerase
Crystal structures of murine norovirus RNA-dependent RNA polymerase
 0.11 14.46 0.36 497-889 X-ray 2.00 monomer HHblits 0.27
3ur0.4.E
RNA-dependent RNA polymerase
Crystal structures of murine norovirus RNA-dependent RNA polymerase in complex with Suramin
 0.12 14.46 0.36 497-889 X-ray 2.45 homo-hexamer 6 x SVR HHblits 0.27
4nru.1.A
RNA dependent RNA polymerase
Murine Norovirus RNA-dependent-RNA-polymerase in complex with Compound 6, a suramin derivative
 0.11 14.46 0.36 497-889 X-ray 2.30 monomer 1 x 2NG, 1 x MG HHblits 0.27
4o4r.1.A
RNA-dependent-RNA-polymerase
Murine Norovirus RdRp in complex with PPNDS
 0.12 14.46 0.36 497-889 X-ray 2.40 monomer 2 x 20V HHblits 0.27
1sh2.1.A
RNA Polymerase
Crystal Structure of Norwalk Virus Polymerase (Metal-free, Centered Orthorhombic)
 0.12 13.17 0.36 497-890 X-ray 2.30 monomer HHblits 0.26
1sh3.2.A
RNA Polymerase
Crystal Structure of Norwalk Virus Polymerase (MgSO4 crystal form)
 0.13 13.17 0.36 497-890 X-ray 2.95 monomer 1 x MG HHblits 0.26
1sh3.1.A
RNA Polymerase
Crystal Structure of Norwalk Virus Polymerase (MgSO4 crystal form)
 0.13 13.17 0.36 497-890 X-ray 2.95 monomer 1 x MG HHblits 0.26
1sh0.1.A
RNA Polymerase
Crystal Structure of Norwalk Virus Polymerase (Triclinic)
 0.13 13.17 0.36 497-890 X-ray 2.17 monomer HHblits 0.26
3h5x.1.A
RNA dependent RNA polymerase
Crystal Structure of 2'-amino-2'-deoxy-cytidine-5'-triphosphate bound to Norovirus GII RNA polymerase
 0.12 12.87 0.36 497-890 X-ray 1.77 monomer 4 x MN, 1 x CSG, 1 x G-C-C-C-G-G-G, 1 x U-G-C-C-C-G-G-G-C HHblits 0.26
4qpx.1.A
Polyprotein
NV polymerase post-incorporation-like complex
 0.12 12.87 0.36 497-890 X-ray 1.86 monomer 3 x MN, 1 x U-G-C-C-C-G-G-G, 1 x A-C-C-C-G-G-G HHblits 0.26
1khv.1.A
RNA-DIRECTED RNA POLYMERASE
Crystal Structure of Rabbit Hemorrhagic Disease Virus RNA-dependent RNA polymerase complexed with Lu3+
 0.12 15.06 0.36 497-881 X-ray 2.50 monomer 1 x LU HHblits 0.26
1khv.2.A
RNA-DIRECTED RNA POLYMERASE
Crystal Structure of Rabbit Hemorrhagic Disease Virus RNA-dependent RNA polymerase complexed with Lu3+
 0.11 15.06 0.36 497-881 X-ray 2.50 monomer 1 x LU HHblits 0.26
3upf.1.A
RNA-dependent RNA polymerase
Crystal structure of murine norovirus RNA-dependent RNA polymerase bound to NF023
 0.11 14.16 0.36 497-889 X-ray 2.60 monomer 1 x 0BU HHblits 0.26
3upf.2.A
RNA-dependent RNA polymerase
Crystal structure of murine norovirus RNA-dependent RNA polymerase bound to NF023
 0.12 14.16 0.36 497-889 X-ray 2.60 monomer 1 x 0BU HHblits 0.26
4zp9.1.A
RNA-dependent RNA polymerase
Coxsackievirus B3 Polymerase - F364I mutant
 0.12 16.67 0.35 496-888 X-ray 1.80 monomer HHblits 0.28
2uut.1.A
RNA-DIRECTED RNA POLYMERASE
The 2.4 angstrom resolution structure of the D346G mutant of the Sapporo Virus RdRp polymerase
 0.12 13.60 0.36 497-890 X-ray 2.40 monomer HHblits 0.27
3nai.1.A
RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
 0.12 14.16 0.36 497-888 X-ray 2.56 homo-dimer 2 x MG, 2 x URF, 4 x MN3 HHblits 0.26
3qid.2.B
RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
 0.12 14.16 0.36 497-888 X-ray 2.50 homo-dimer 2 x MN3 HHblits 0.26
3sfu.1.A
RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with ribavirin
 0.11 14.16 0.36 497-888 X-ray 2.50 homo-dimer 2 x RBV, 2 x MG HHblits 0.26
3sfu.2.A
RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with ribavirin
 0.12 14.16 0.36 497-888 X-ray 2.50 homo-dimer 2 x RBV, 2 x MG HHblits 0.26
3sfu.2.B
RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with ribavirin
 0.11 14.16 0.36 497-888 X-ray 2.50 homo-dimer 2 x RBV, 2 x MG HHblits 0.26
3sfg.1.A
RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with 2thiouridine(2TU)
 0.11 14.16 0.36 497-888 X-ray 2.21 homo-dimer 2 x 2TU, 2 x MG HHblits 0.26
3sfg.2.A
RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with 2thiouridine(2TU)
 0.11 14.16 0.36 497-888 X-ray 2.21 homo-dimer 2 x 2TU, 2 x MG HHblits 0.26
3sfg.2.B
RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with 2thiouridine(2TU)
 0.12 14.16 0.36 497-888 X-ray 2.21 homo-dimer 2 x 2TU, 2 x MG HHblits 0.26
3qid.1.A
RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
 0.12 14.16 0.36 497-888 X-ray 2.50 homo-dimer 2 x MN3 HHblits 0.26
3qid.2.A
RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
 0.12 14.16 0.36 497-888 X-ray 2.50 homo-dimer 2 x MN3 HHblits 0.26
3nai.2.B
RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
 0.12 14.16 0.36 497-888 X-ray 2.56 homo-dimer 2 x MG, 2 x URF, 4 x MN3 HHblits 0.26
3nai.2.A
RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
 0.12 14.16 0.36 497-888 X-ray 2.56 homo-dimer 2 x MG, 2 x URF, 4 x MN3 HHblits 0.26
4zp6.1.A
Genome polyprotein
Coxsackievirus B3 Polymerase - F364A mutant
 0.12 16.72 0.35 496-888 X-ray 1.65 monomer HHblits 0.28
4y2a.1.A
3D polymerase
Crystal Structure of Coxsackie Virus B3 3D polymerase in complex with GPC-N114 inhibitor
 0.12 16.67 0.35 496-888 X-ray 2.90 monomer 1 x 1FS HHblits 0.28
3cdu.1.A
RNA-directed RNA polymerase 3D-POL
Crystal structure of coxsackievirus B3 RNA-dependent RNA polymerase (3Dpol) in complex with a pyrophosphate
 0.12 17.03 0.35 496-888 X-ray 2.10 monomer 1 x POP HHblits 0.28
4zp8.1.A
RNA-dependent RNA polymerase
Coxsackievirus B3 Polymerase - F364L mutant
 0.12 16.05 0.35 496-888 X-ray 1.89 monomer HHblits 0.28
4zp7.1.A
Genome polyprotein
Coxsackievirus B3 Polymerase - F364V mutant
 0.12 16.41 0.35 496-887 X-ray 1.90 monomer HHblits 0.28
4wfx.1.A
RNA-directed RNA polymerase
Coxsackievirus B3 Polymerase - F232L Mutant - NaCl Crystal Form
 0.12 16.72 0.35 496-887 X-ray 1.81 monomer HHblits 0.28
4wfy.1.A
RNA-directed RNA polymerase
Coxsackievirus B3 Polymerase - F232L Mutant - AmSO4 Crystal Form
 0.12 16.72 0.35 496-887 X-ray 2.06 monomer HHblits 0.28
4zpc.1.A
RNA-dependent RNA polymerase
Coxsackievirus B3 Polymerase - A341G mutant
 0.12 16.72 0.35 496-887 X-ray 1.59 monomer HHblits 0.28
1xr5.1.A
Genome polyprotein
Crystal Structure of the RNA-dependent RNA Polymerase 3D from human rhinovirus serotype 14
 0.11 18.07 0.34 495-887 X-ray 2.80 monomer 1 x SM HHblits 0.29
4y34.1.A
3D polymerase
Crystal Structure of Coxsackievirus B3 3D polymerase in complex with GPC-N143
 0.12 16.77 0.35 496-888 X-ray 2.70 monomer 1 x 45Z HHblits 0.28
3ddk.1.A
RNA polymerase B3 3Dpol
Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase
 0.12 16.46 0.35 496-887 X-ray 2.25 monomer HHblits 0.28
4k4x.1.A
RNA-dependent RNA polymerase
Coxsackievirus B3 polymerase elongation complex (r2_form), rna
 0.12 16.77 0.35 496-888 X-ray 2.37 monomer 1 x MG, 1 x G-G HHblits 0.28
4zpd.1.A
RNA-directed RNA polymerase
Coxsackievirus B3 Polymerase - A345V mutant
 0.12 16.46 0.35 496-887 X-ray 1.80 monomer HHblits 0.28
4zpb.1.A
RNA-directed RNA polymerase
Coxsackievirus B3 Polymerase - F364W mutant
 0.12 16.46 0.35 496-887 X-ray 1.80 monomer HHblits 0.28
4zpa.1.A
RNA-directed RNA polymerase
Coxsackievirus B3 Polymerase - F364Y mutant
 0.12 16.82 0.34 496-887 X-ray 2.66 monomer HHblits 0.28
6r1i.1.A
Genome polyprotein
Structure of porcine Aichi virus polymerase
 0.12 16.72 0.35 496-888 X-ray 2.63 monomer HHblits 0.28
6r1i.2.A
Genome polyprotein
Structure of porcine Aichi virus polymerase
 0.12 16.72 0.35 496-888 X-ray 2.63 monomer HHblits 0.28
6kwq.1.A
RNA-dependent RNA polymerase
Crystal structure of enterovirus 71 polymerase elongation complex (native form)
 0.12 16.77 0.35 496-886 X-ray 1.76 monomer 2 x MG, 1 x ZN HHblits 0.28
5y6z.1.A
Genome polyprotein
Crystal structure of the coxsackievirus A16 polymerase elongation complex
 0.11 16.82 0.34 497-888 X-ray 2.50 monomer HHblits 0.28
1raj.1.A
Genome polyprotein
Poliovirus Polymerase with a 68 residue N-terminal truncation
 0.10 16.72 0.35 496-889 X-ray 2.50 monomer HHblits 0.28
6lse.1.A
Genome polyprotein
Crystal structure of the enterovirus 71 polymerase elongation complex (C3S6A/C3S6B form)
 0.11 16.51 0.34 496-887 X-ray 2.25 monomer 1 x ZN, 1 x POP HHblits 0.28
4ika.1.A
3Dpol
Crystal structure of EV71 3Dpol-VPg
 0.12 17.24 0.34 496-886 X-ray 2.70 hetero-oligomer 2 x NI HHblits 0.28
5xe0.1.A
Genome polyprotein
Crystal structure of EV-D68-3Dpol in complex with GTP
 0.12 15.63 0.34 496-886 X-ray 2.30 monomer 1 x GTP HHblits 0.28
3n6m.1.A
RNA-dependent RNA polymerase
Crystal structure of EV71 RdRp in complex with GTP
 0.12 16.51 0.34 496-885 X-ray 2.50 monomer 1 x NI, 1 x GTP HHblits 0.28
3n6l.1.A
RNA-dependent RNA polymerase
The crystal structure of RNA-dependent RNA polymerase of EV71 virus
 0.12 16.51 0.34 496-885 X-ray 2.60 monomer 1 x NI HHblits 0.28
3ol8.4.A
Polymerase
Poliovirus polymerase elongation complex with CTP-Mn
 0.12 15.89 0.34 496-886 X-ray 2.75 monomer 1 x ZN, 2 x MN, 1 x POP, 1 x G-G-A-G HHblits 0.28
4k4s.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus polymerase elongation complex (r3_form)
 0.12 15.89 0.34 496-886 X-ray 2.40 monomer 1 x ZN, 1 x G-G-A-G HHblits 0.28
4nly.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - C290E Loop Mutant
 0.12 16.61 0.34 496-885 X-ray 2.30 monomer HHblits 0.28
1rdr.1.A
POLIOVIRUS 3D POLYMERASE
POLIOVIRUS 3D POLYMERASE
 0.10 16.25 0.34 496-886 X-ray 2.40 monomer 2 x CA HHblits 0.28
4k4w.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus polymerase elongation complex (r5+2_form)
 0.12 16.25 0.34 496-886 X-ray 2.69 monomer HHblits 0.28
4nlv.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - G289A/C290F Loop Mutant
 0.12 15.58 0.34 496-886 X-ray 2.30 monomer HHblits 0.28
4nlu.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - G289A Loop Mutant
 0.12 15.89 0.34 496-886 X-ray 2.10 monomer HHblits 0.28
5ziu.1.A
RdRp
Crystal structure of human Entervirus D68 RdRp
 0.12 15.05 0.34 496-884 X-ray 2.15 monomer HHblits 0.28
4nlr.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - C290S Loop Mutant
 0.12 16.30 0.34 496-885 X-ray 2.00 monomer HHblits 0.28
1xr7.1.A
Genome polyprotein
Crystal structure of RNA-dependent RNA Polymerase 3D from human rhinovirus serotype 16
 0.12 16.61 0.34 496-886 X-ray 2.30 monomer HHblits 0.28
5f8g.1.A
Genome polyprotein
Enterovirus 71 Polymerase Elongation Complex (C1S1 Form)
 0.11 17.41 0.34 496-884 X-ray 2.78 monomer 1 x ZN HHblits 0.29
4nlp.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - C290V Loop Mutant
 0.12 16.61 0.34 496-886 X-ray 2.20 monomer HHblits 0.28
4nlo.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - C290I Loop Mutant
 0.12 16.30 0.34 496-886 X-ray 2.20 monomer HHblits 0.28
4nlw.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - G289A/C290I Loop Mutant
 0.12 15.63 0.34 496-886 X-ray 2.10 monomer HHblits 0.27
2ijd.1.A
Picornain 3C, RNA-directed RNA polymerase
Crystal Structure of the Poliovirus Precursor Protein 3CD
 0.12 15.63 0.34 496-886 X-ray 3.40 homo-dimer 2 x ZN HHblits 0.27
2ijd.2.A
Picornain 3C, RNA-directed RNA polymerase
Crystal Structure of the Poliovirus Precursor Protein 3CD
 0.12 15.63 0.34 496-886 X-ray 3.40 homo-dimer 2 x ZN HHblits 0.27
4nlq.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - C290F Loop Mutant
 0.12 16.67 0.34 496-885 X-ray 2.30 monomer HHblits 0.28
3nma.1.A
3D polymerase
Mutant P169S of Foot-and-mouth disease Virus RNA dependent RNA-polymerase
 0.11 15.53 0.35 496-884 X-ray 2.60 monomer 1 x MG, 1 x G-G-C, 1 x C-C HHblits 0.27
6lsg.1.A
Genome polyprotein
Crystal structure of the enterovirus 71 polymerase elongation complex (C0S6M form)
 0.12 16.35 0.34 496-884 X-ray 2.14 monomer 1 x ZN HHblits 0.28
8c2p.1.A
RNA-directed RNA polymerase 3D-POL
FMDV 3D polymerase in complex with 3B3
 0.11 14.55 0.35 496-884 X-ray 1.85 hetero-1-1-mer HHblits 0.27
3kna.1.A
3D polymerase
M296I mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA
 0.11 14.55 0.35 496-884 X-ray 2.80 monomer 1 x MG, 1 x A-U-G-G-G-C-C, 1 x G-G-C-C-C HHblits 0.27
3koa.1.A
3D polymerase
M296I mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA and GTP
 0.11 14.55 0.35 496-884 X-ray 2.40 monomer 2 x MG, 1 x DPO, 1 x A-U-G-G-G-C, 1 x C-C-C-G HHblits 0.27
4r0e.1.A
RNA-directed RNA polymerase
Crystal Structure of the Poliovirus RNA-Dependent RNA Polymerase Low-Fidelity Mutant 3Dpol H273R
 0.12 16.35 0.34 496-885 X-ray 3.00 monomer HHblits 0.28
2ijf.1.A
RNA-directed RNA polymerase
Crystal Structure of the Poliovirus RNA-Dependent RNA Polymerase Fidelity Mutant 3Dpol G64S
 0.12 15.99 0.34 496-885 X-ray 3.00 monomer HHblits 0.28
4k4u.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus polymerase elongation complex (r5_form)
 0.12 16.35 0.34 496-884 X-ray 2.85 monomer HHblits 0.28
4nlx.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - G289A/C290V Loop Mutant
 0.12 15.67 0.34 496-884 X-ray 2.60 monomer HHblits 0.27
2ily.1.A
Poliovirus polymerase
Crystal structure of poliovirus polymerase complexed with ATP and Mg2+
 0.12 16.72 0.34 496-884 X-ray 2.60 monomer 1 x ATP HHblits 0.28
3nky.1.A
3D polymerase
Structure of a mutant P44S of Foot-and-mouth disease Virus RNA-dependent RNA polymerase
 0.11 14.60 0.35 497-884 X-ray 2.28 monomer 2 x MG HHblits 0.27
4k50.2.A
RNA polymerase 3D-POL
Rhinovirus 16 polymerase elongation complex (r1_form)
 0.12 16.40 0.34 496-885 X-ray 2.93 monomer HHblits 0.28
1tp7.1.A
Genome polyprotein
Crystal Structure of the RNA-dependent RNA Polymerase from Human Rhinovirus 16
 0.12 16.40 0.34 496-885 X-ray 2.40 monomer 1 x DMX HHblits 0.28
1tp7.3.A
Genome polyprotein
Crystal Structure of the RNA-dependent RNA Polymerase from Human Rhinovirus 16
 0.12 16.40 0.34 496-885 X-ray 2.40 monomer HHblits 0.28
8c1n.1.A
RNA-directed RNA polymerase 3D-POL
FMDV 3D polymerase in complex with 3B1 protein solved in P212121 space group
 0.11 14.64 0.34 496-882 X-ray 1.70 hetero-2-1-mer 2 x 3PO HHblits 0.27
8c1n.1.B
RNA-directed RNA polymerase 3D-POL
FMDV 3D polymerase in complex with 3B1 protein solved in P212121 space group
 0.11 14.64 0.34 496-882 X-ray 1.70 hetero-2-1-mer 2 x 3PO HHblits 0.27
3kms.1.A
3D polymerase
G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA trigonal structure
 0.12 15.99 0.34 496-883 X-ray 2.20 monomer 1 x MG, 1 x A-U-G-G-G-C-C, 1 x G-G-C-C-C HHblits 0.27
3kmq.1.A
3D polymerase
G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, tetragonal structure
 0.12 15.99 0.34 496-883 X-ray 2.11 monomer 1 x G-G-G-C-C, 1 x G-G-C-C-C HHblits 0.27
6s2l.1.A
Genome polyprotein
FMDV 3D polymerase crystallized in presence of (F)uridylylated VPg peptide
 0.11 14.64 0.34 496-882 X-ray 2.30 monomer HHblits 0.27
1tql.1.A
RNA-directed RNA polymerase
POLIOVIRUS POLYMERASE G1A MUTANT
 0.12 16.46 0.34 496-883 X-ray 2.30 monomer HHblits 0.28
4nls.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - S288A Loop Mutant
 0.12 16.14 0.34 496-882 X-ray 2.00 monomer HHblits 0.28
1wne.1.A
RNA-dependent RNA polymerase
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with a template-primer RNA
 0.11 15.72 0.34 497-882 X-ray 3.00 monomer 1 x MG, 1 x C-A-U-G-G-G-C-C, 1 x G-G-C-C-C HHblits 0.27
4x2b.1.A
RNA dependent RNA polymerase
K20A RNA dependent RNA polymerase mutant from Foot-and-Mouth disease Virus complexed with an RNA
 0.11 14.69 0.34 496-881 X-ray 2.94 monomer 1 x MG, 1 x A-U-G-G-G-C-C, 1 x G-G-G-C-C-C HHblits 0.27
5n8x.1.A
3D polymerase
Trigonal structure of mutant V173I of 3D polymerase from Foot-and-Mouth Disease Virus
 0.12 15.05 0.34 497-882 X-ray 2.40 monomer 1 x MN HHblits 0.27
5n95.1.A
3D polymerase
Tetragonal structure of mutant V173I of 3D polymerase from Foot-and-Mouth Disease Virus
 0.11 15.05 0.34 497-882 X-ray 2.60 monomer 1 x 3PO HHblits 0.27
4wyw.1.A
RNA-directed RNA polymerase 3D-POL
Mutant K20E of 3D polymerase from Foot-and-Mouth Disease Virus
 0.11 14.69 0.34 497-882 X-ray 1.80 monomer 1 x 3PO HHblits 0.27
3klv.1.A
3D polymerase
M296I G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA
 0.12 15.36 0.34 497-882 X-ray 2.60 monomer 2 x MG, 1 x A-U-G-G-G-C-C, 1 x G-G-C-C-C HHblits 0.27
4nlt.1.A
RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - S291P Loop Mutant
 0.12 16.88 0.34 496-881 X-ray 2.50 monomer HHblits 0.28
4wzq.1.A
RNA dependent-RNA polymerase 3D
Mutant K20E of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with RNA
 0.12 15.05 0.34 497-882 X-ray 2.80 monomer 1 x MN, 1 x A-U-G-G-G-C-C-C, 1 x U-G-G-G-C-C-C HHblits 0.27
5jxs.1.A
RNA dependent RNA polymerase
Mutant GC216/7AA of 3D polymerase from Foot-and-Mouth Disease Virus
 0.11 14.73 0.34 496-882 X-ray 2.80 monomer 1 x MG, 1 x A-U-G-G-G-C-C-C, 1 x G-G-G-C-C-C HHblits 0.27
4iqx.1.A
3D polymerase
Mutant P44S P169S M296I of Foot-and-mouth disease Virus RNA-dependent RNA polymerase
 0.11 15.41 0.34 497-881 X-ray 2.50 monomer 1 x A-U-G-G-G-C-C, 1 x G-G-C-C-C HHblits 0.27
4wzm.1.A
RNA dependent RNA polymerase
Mutant K18E of RNA dependent RNA polymerase from Foot-and-Mouth Disease Virus complexed with RNA
 0.11 14.73 0.34 497-881 X-ray 2.52 monomer 1 x MN, 1 x A-U-G-G-G-C-C-C, 1 x U-G-G-G-C-C-C HHblits 0.27
3nl0.1.A
3D polymerase
Mutant P44S M296I of Foot-and-mouth disease Virus RNA-dependent RNA polymerase
 0.11 14.73 0.34 497-881 X-ray 2.60 monomer 2 x MG, 1 x U-G-G-G-C-C-C, 1 x G-G-G-C-C-C HHblits 0.27
6qwt.1.A
Genome polyprotein
Sicinivirus 3Dpol RNA dependent RNA polymerase
 0.11 15.20 0.32 496-847 X-ray 2.30 monomer HHblits 0.28
2f8e.1.A
RNA-dependent RNA polymerase
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with uridylylated VPg protein
 0.10 14.73 0.31 497-846 X-ray 2.90 hetero-oligomer 1 x MN, 1 x MG, 1 x U5P HHblits 0.27
1xr6.1.A
Genome polyprotein
Crystal Structure of RNA-dependent RNA Polymerase 3D from human rhinovirus serotype 1B
 0.11 17.01 0.31 496-848 X-ray 2.50 monomer 1 x K HHblits 0.28
4wyl.1.A
RNA-directed RNA polymerase 3D-POL
Mutant K18E of 3D polymerase from Foot-and-Moth Disease Virus
 0.09 13.70 0.31 497-845 X-ray 2.00 monomer 1 x MN HHblits 0.26
6gvy.1.A
Genome polyprotein
Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with an template -primer RNA
 0.10 13.70 0.31 497-845 X-ray 2.20 monomer 1 x C-C-G-G-G, 1 x U-C-C-C-G-G-G HHblits 0.26
6gvv.1.A
RNA polymerase 3D
Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus
 0.09 13.70 0.31 497-845 X-ray 2.35 monomer HHblits 0.26
4y3c.1.A
3D polymerase
I304V 3D polymerase mutant of EMCV
 0.09 14.43 0.31 497-847 X-ray 3.20 monomer HHblits 0.27
4y3c.2.A
3D polymerase
I304V 3D polymerase mutant of EMCV
 0.09 14.43 0.31 497-847 X-ray 3.20 monomer HHblits 0.27
4y3c.3.A
3D polymerase
I304V 3D polymerase mutant of EMCV
 0.09 14.43 0.31 497-847 X-ray 3.20 monomer HHblits 0.27
4y3c.5.A
3D polymerase
I304V 3D polymerase mutant of EMCV
 0.09 14.43 0.31 497-847 X-ray 3.20 monomer HHblits 0.27
4y3c.6.A
3D polymerase
I304V 3D polymerase mutant of EMCV
 0.09 14.43 0.31 497-847 X-ray 3.20 monomer HHblits 0.27
4nyz.1.A
Genome polyprotein
The EMCV 3Dpol structure with altered motif A conformation at 2.15A resolution
 0.09 14.09 0.31 497-847 X-ray 2.15 monomer 1 x GLN, 1 x MG HHblits 0.27
4y2c.1.A
Genome polyprotein
M300V 3D polymerase mutant of EMCV
 0.09 14.09 0.31 497-847 X-ray 2.20 monomer HHblits 0.26
4nz0.1.A
Genome polyprotein
The EMCV 3Dpol structure at 2.8A resolution
 0.10 14.19 0.31 497-846 X-ray 2.80 monomer HHblits 0.27
4nz0.2.A
Genome polyprotein
The EMCV 3Dpol structure at 2.8A resolution
 0.09 14.19 0.31 497-846 X-ray 2.80 monomer HHblits 0.27
4nz0.3.A
Genome polyprotein
The EMCV 3Dpol structure at 2.8A resolution
 0.09 14.19 0.31 497-846 X-ray 2.80 monomer HHblits 0.27
4nz0.5.A
Genome polyprotein
The EMCV 3Dpol structure at 2.8A resolution
 0.10 14.19 0.31 497-846 X-ray 2.80 monomer HHblits 0.27
4nz0.6.A
Genome polyprotein
The EMCV 3Dpol structure at 2.8A resolution
 0.09 14.19 0.31 497-846 X-ray 2.80 monomer HHblits 0.27
1s48.1.A
RNA-dependent RNA polymerase
Crystal structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from BVDV
 0.08 14.89 0.30 552-890 X-ray 3.00 monomer HHblits 0.28
6ae4.1.A
RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-694, Y471A mutant)
 0.07 13.83 0.30 552-888 X-ray 2.95 monomer HHblits 0.27
5yf5.1.A
RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-694)
 0.07 15.41 0.30 552-888 X-ray 2.49 monomer HHblits 0.28
5y6r.1.A
Genome polyprotein
Crystal structure of CSFV NS5B
 0.08 13.88 0.30 552-888 X-ray 3.01 monomer HHblits 0.27
7ekj.1.A
Classical swine fever virus NS5B
Crystals structure of classical swine fever virus NS5B (residues 91-694)
 0.09 15.05 0.30 552-888 X-ray 3.06 monomer HHblits 0.28
5yf6.1.A
RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-682)
 0.08 14.70 0.30 552-888 X-ray 2.10 monomer HHblits 0.27
6gp9.1.A
RNA-directed RNA polymerase
Structural studies of hepatitis C virus non-structural protein-5b of genotype 4a
 0.08 15.38 0.28 553-871 X-ray 3.10 monomer HHblits 0.27
4adp.1.A
RNA-DIRECTED RNA POLYMERASE
HCV-J6 NS5B POLYMERASE V405I MUTANT
 0.07 13.03 0.28 554-874 X-ray 1.90 monomer HHblits 0.26
2xwh.1.A
RNA DEPENDENT RNA POLYMERASE
HCV-J6 NS5B POLYMERASE STRUCTURE AT 1.8 ANGSTROM
 0.07 12.40 0.28 554-870 X-ray 1.80 monomer HHblits 0.26
6mvp.1.A
Genome polyprotein
HCV NS5B 1b N316 bound to Compound 18
 0.07 17.06 0.27 552-868 X-ray 2.00 monomer 1 x K4S HHblits 0.28
2fvc.1.A
polyprotein
Crystal structure of NS5B BK strain (delta 24) in complex with a 3-(1,1-Dioxo-2H-(1,2,4)-benzothiadiazin-3-yl)-4-hydroxy-2(1H)-quinolinone
 0.07 16.67 0.27 552-868 X-ray 2.00 monomer 1 x 888 HHblits 0.28
2jc0.1.A
RNA-DEPENDENT RNA-POLYMERASE
CRYSTAL STRUCTURE OF HEPATITIS C VIRUS POLYMERASE IN COMPLEX WITH INHIBITOR SB655264
 0.07 16.27 0.27 552-867 X-ray 2.20 monomer 2 x 699 HHblits 0.27
4wtk.1.A
RNA-directed RNA polymerase
CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS IN COMPLEX WITH RNA TEMPLATE 5'-AGCC, RNA PRIMER 5'-PGG, MN2+, AND CDP
 0.07 12.94 0.27 553-868 X-ray 2.50 monomer 3 x MN, 1 x CDP, 1 x PG6, 1 x B3P, 1 x A-G-C-C, 1 x G-G HHblits 0.26
6mvk.1.A
HCV Polymerase
HCV NS5B 1b N316 bound to Compound 18
 0.07 16.67 0.27 552-868 X-ray 2.30 monomer 1 x K4J HHblits 0.27
6mvq.1.A
HCV Polymerase
HCV NS5B 1b N316 bound to Compound 31
 0.07 16.67 0.27 552-868 X-ray 2.14 monomer 1 x K4M HHblits 0.27
4aep.1.A
RNA-DIRECTED RNA POLYMERASE
HCV-JFH1 NS5B POLYMERASE STRUCTURE AT 1.8 ANGSTROM
 0.07 13.33 0.27 553-868 X-ray 1.80 monomer HHblits 0.26
2xxd.1.A
RNA-DIRECTED RNA POLYMERASE
HCV-JFH1 NS5B POLYMERASE STRUCTURE AT 1.9 ANGSTROM
 0.07 13.33 0.27 553-868 X-ray 1.88 monomer HHblits 0.26
3h5s.1.A
RNA-directed RNA polymerase
Hepatitis C virus polymerase NS5B with saccharin inhibitor
 0.08 16.33 0.27 552-867 X-ray 2.00 monomer 1 x H5S HHblits 0.27
2hai.1.A
HEPATITIS C VIRUS NS5B RNA POLYMERASE
Crystal structure of HCV NS5B RNA polymerase in complex with novel class of dihydropyrone-containing inhibitor.
 0.07 16.33 0.27 552-867 X-ray 1.58 monomer 1 x PFI HHblits 0.27
3frz.1.A
RNA-directed RNA polymerase
Crystal Structure of HCV NS5B RNA polymerase in complex with PF868554
 0.07 16.33 0.27 552-867 X-ray 1.86 monomer 1 x AG0, 1 x AG6 HHblits 0.27
4kai.1.A
HCV Polymerase
HCV NS5B GT1B N316 with GSK5852A
 0.07 16.33 0.27 552-867 X-ray 2.30 monomer 2 x 1PV HHblits 0.27
6mvo.1.A
RNA-directed RNA polymerase
HCV NS5B 1A Y316 bound to Compound 49
 0.07 15.94 0.27 552-867 X-ray 1.95 monomer 1 x K4P HHblits 0.27
4dru.1.A
RNA-directed RNA polymerase
HCV NS5B in complex with macrocyclic INDOLE INHIBITOR
 0.08 15.60 0.27 554-868 X-ray 2.10 monomer 1 x 0LN HHblits 0.27
5czb.1.A
NS5B
HCV NS5B IN COMPLEX WITH LIGAND IDX17119-5
 0.08 15.66 0.27 554-867 X-ray 1.96 monomer 1 x 55W, 1 x MES HHblits 0.27
4eaw.1.A
RNA-directed RNA polymerase
HCV NS5B in complex with IDX375
 0.08 15.26 0.27 554-867 X-ray 2.00 monomer 1 x 0NQ HHblits 0.27
3qgd.1.A
RNA-directed RNA polymerase
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with (2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5H-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid and (2R)-4-(2,6-dimethoxypyrimidin-4-yl)-1-[(4-ethylphenyl)sulfonyl]-N-(4-methoxybenzyl)piperazine-2-carboxamide
 0.07 16.06 0.27 553-865 X-ray 2.60 monomer 1 x 23E HHblits 0.27
3qgg.1.A
RNA-directed RNA polymerase
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with (2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5H-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid and N-cyclopropyl-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide
 0.07 16.06 0.27 553-865 X-ray 3.22 monomer 1 x 23E, 1 x 63F HHblits 0.27
3qge.2.A
RNA-directed RNA polymerase
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with (2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5H-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid and (2R)-4-(2,6-dimethoxypyrimidin-4-yl)-N-(4-methoxybenzyl)-1-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazine-2-carboxamide
 0.07 16.06 0.27 553-865 X-ray 3.00 monomer 1 x 23E, 1 x 26F HHblits 0.27
5pzp.2.A
RNA-directed RNA polymerase
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH 4-FLUORO-2-(4-FLUOROPHENYL)-N-METHYL-5-(2-METHYL-5-{[1-(PYRIMIDIN-2-YL)CYCLOPROPYL]CARBAMOYL}PHENYL)-1-BENZOFURAN-3-CARBOXAMIDE (BMS-929075)
 0.07 16.06 0.27 553-865 X-ray 2.95 monomer 1 x 23E, 1 x 8XJ HHblits 0.27
4nld.1.A
RNA-directed RNA polymerase
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with BMS-791325 also known as (1aR,12bS)-8-cyclohexyl-n-(dimethylsulfamoyl)-11-methoxy-1a-{[(1R,5S)-3-methyl-3,8-diazabicyclo[3.2.1]oct-8-yl]carbonyl}-1,1a,2,12b-tetrahydrocyclopropa[d]indolo[2,1-a][2]benzazepine-5-carboxamide and 2-(4-fluorophenyl)-n-methyl-6-[(methylsulfonyl)amino]-5-(propan-2-yloxy)-1-benzofuran-3-carboxamide
 0.06 16.06 0.27 553-865 X-ray 2.75 monomer 1 x 2N7, 1 x 2N5, 2 x BOG HHblits 0.27
5pzo.1.A
RNA-directed RNA polymerase
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE C316N IN COMPLEX WITH 2-(4-FLUOROPHENYL)-N-METHYL-5-[3-({2-METHYL-1-OXO-1-[(1,3,4-THIADIAZOL-2-YL)AMINO]PROPAN-2-YL}CARBAMOYL)PHENYL]-1-BENZOFURAN-3-CARBOXAMIDE
 0.08 16.60 0.27 554-864 X-ray 2.80 monomer 1 x 23E, 1 x 8XM HHblits 0.28
5pzo.2.A
RNA-directed RNA polymerase
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE C316N IN COMPLEX WITH 2-(4-FLUOROPHENYL)-N-METHYL-5-[3-({2-METHYL-1-OXO-1-[(1,3,4-THIADIAZOL-2-YL)AMINO]PROPAN-2-YL}CARBAMOYL)PHENYL]-1-BENZOFURAN-3-CARBOXAMIDE
 0.07 16.60 0.27 554-864 X-ray 2.80 monomer 1 x 23E, 1 x 8XM HHblits 0.28
3ske.1.A
HCV NS5B RNA_DEPENDENT RNA POLYMERASE
I. Novel HCV NS5B Polymerase Inhibitors: Discovery of Indole 2- Carboxylic Acids with C3-Heterocycles
 0.08 16.26 0.26 554-864 X-ray 1.97 monomer 1 x 054 HHblits 0.28
3lkh.2.A
RNA-directed RNA polymerase
Inhibitors of Hepatitis C Virus Polymerase: Synthesis and Characterization of Novel 6-Fluoro-N-[2-Hydroxy-1(S)-Benzamides
 0.08 16.26 0.26 554-864 X-ray 2.05 monomer 1 x LT6 HHblits 0.28
4mz4.2.A
RNA-directed RNA polymerase
Discovery of an Irreversible HCV NS5B Polymerase Inhibitor
 0.08 16.26 0.26 554-864 X-ray 1.63 monomer 1 x 2F3 HHblits 0.28
7diy.1.B
nsp14-ExoN protein
Crystal structure of SARS-CoV-2 nsp10 bound to nsp14-exoribonuclease domain
 0.08 17.55 0.26 83-363 X-ray 2.69 hetero-1-1-mer 4 x ZN, 1 x MG HHblits 0.28
7mc6.1.A
Proofreading exoribonuclease
Crystal structure of the SARS-CoV-2 ExoN-nsp10 complex containing Mg2+ ion
 0.09 17.55 0.26 83-363 X-ray 2.10 hetero-1-1-mer 4 x ZN, 1 x MG HHblits 0.28
4ry4.1.A
HCV J4 RNA polymerase (NS5B)
C-terminal mutant (Y448F) of HCV/J4 RNA polymerase
 0.08 15.85 0.26 554-864 X-ray 2.59 monomer HHblits 0.28
4ry4.2.A
HCV J4 RNA polymerase (NS5B)
C-terminal mutant (Y448F) of HCV/J4 RNA polymerase
 0.08 15.85 0.26 554-864 X-ray 2.59 monomer HHblits 0.28
4ry7.1.A
HCV J4 RNA polymerase (NS5B)
C-terminal mutant (D559E) of HCV/J4 RNA polymerase
 0.07 16.33 0.26 554-864 X-ray 3.00 monomer HHblits 0.28
4ry7.2.A
HCV J4 RNA polymerase (NS5B)
C-terminal mutant (D559E) of HCV/J4 RNA polymerase
 0.07 16.33 0.26 554-864 X-ray 3.00 monomer HHblits 0.28
3u4r.1.A
RNA-directed RNA polymerase
Novel HCV NS5B polymerase Inhibitors: Discovery of Indole C2 Acyl sulfonamides
 0.08 15.45 0.26 554-864 X-ray 2.00 monomer 1 x 08F HHblits 0.27
4oow.1.A
RNA-directed RNA polymerase
HCV NS5B polymerase with a fragment of quercetagetin
 0.07 15.45 0.26 554-864 X-ray 2.57 monomer 1 x CAQ HHblits 0.27
4oow.2.A
RNA-directed RNA polymerase
HCV NS5B polymerase with a fragment of quercetagetin
 0.08 15.45 0.26 554-864 X-ray 2.57 monomer HHblits 0.27
3gnv.1.A
RNA-directed RNA polymerase
HCV NS5B polymerase in complex with 1,5 benzodiazepine inhibitor 1b
 0.07 15.45 0.26 554-864 X-ray 2.75 monomer 1 x XNZ HHblits 0.27
3gol.2.A
RNA-directed RNA polymerase
HCV NS5b polymerase in complex with 1,5 benzodiazepine inhibitor (R)-11d
 0.08 15.45 0.26 554-864 X-ray 2.85 monomer 1 x XND, 1 x MG HHblits 0.27
4gmc.1.A
NS5B polymerase
Crystal structure of HCV NS5B polymerase in complex with a thumb inhibitor
 0.08 15.45 0.26 554-864 X-ray 2.70 monomer HHblits 0.27
4gmc.2.A
NS5B polymerase
Crystal structure of HCV NS5B polymerase in complex with a thumb inhibitor
 0.07 15.45 0.26 554-864 X-ray 2.70 monomer 1 x 1BI HHblits 0.27
4j0a.2.A
Genome polyprotein
Crystal structure of hcv ns5b polymerase in complex with 2-{[(4-METHYLPHENYL)SULFONYL]AMINO}-4-PHENOXYBENZOIC ACID
 0.08 15.45 0.26 554-864 X-ray 2.40 monomer HHblits 0.27
2xhw.1.A
RNA-DIRECTED RNA POLYMERASE
HCV-J4 NS5B POLYMERASE TRIGONAL CRYSTAL FORM
 0.07 15.45 0.26 554-864 X-ray 2.66 monomer HHblits 0.27
2xhu.1.A
RNA-DIRECTED RNA POLYMERASE
HCV-J4 NS5B POLYMERASE ORTHORHOMBIC CRYSTAL FORM
 0.07 15.45 0.26 554-864 X-ray 2.29 monomer HHblits 0.27
4ry5.1.A
HCV J4 RNA polymerase (NS5B)
C-terminal mutant (W550N) of HCV/J4 RNA polymerase
 0.07 15.45 0.26 554-864 X-ray 2.71 monomer 2 x MN, 1 x UTP HHblits 0.27
4ry5.2.A
HCV J4 RNA polymerase (NS5B)
C-terminal mutant (W550N) of HCV/J4 RNA polymerase
 0.07 15.45 0.26 554-864 X-ray 2.71 monomer 2 x MN, 1 x UTP HHblits 0.27
1nb7.1.A
polyprotein
HC-J4 RNA polymerase complexed with short RNA template strand
 0.07 15.45 0.26 553-864 X-ray 2.90 monomer 2 x MN, 1 x U-U-U-U HHblits 0.27
1nb7.2.A
polyprotein
HC-J4 RNA polymerase complexed with short RNA template strand
 0.07 15.45 0.26 553-864 X-ray 2.90 monomer 2 x MN, 1 x U-U-U-U HHblits 0.27
4ry6.1.A
HCV J4 RNA polymerase (NS5B)
C-terminal mutant (W550A) of HCV/J4 RNA polymerase
 0.07 15.45 0.26 554-864 X-ray 2.52 monomer HHblits 0.27
3upi.1.A
RNA-directed RNA polymerase
Synthesis of novel 4,5-dihydrofurano indoles and their evaluation as HCV NS5B polymerase inhibitors
 0.08 15.45 0.26 554-865 X-ray 2.00 monomer 1 x 0C2 HHblits 0.27
2xhv.1.A
RNA-DIRECTED RNA POLYMERASE
HCV-J4 NS5B POLYMERASE POINT MUTANT ORTHORHOMBIC CRYSTAL FORM
 0.07 15.51 0.26 554-864 X-ray 1.90 monomer 1 x MG HHblits 0.27
7mc5.1.A
Proofreading exoribonuclease
Crystal structure of the SARS-CoV-2 ExoN-nsp10 complex
 0.08 17.28 0.26 85-363 X-ray 1.64 hetero-1-1-mer 4 x ZN, 2 x TLA HHblits 0.28
7f0s.1.A
RNA-directed RNA polymerase nsP4
A crystal structure of alphavirus nonstructural protein 4 (nsP4) reveals an intrinsically 1dynamic RNA-dependent RNA polymerase
 0.06 15.23 0.26 553-863 X-ray 2.60 monomer HHblits 0.28
5yf7.1.A
RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-672)
 0.07 15.42 0.26 552-846 X-ray 2.27 monomer HHblits 0.28
6ae5.1.A
RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A mutant, form 1)
 0.07 14.17 0.26 552-846 X-ray 2.75 monomer HHblits 0.28
2cjq.1.A
RNA-DIRECTED RNA POLYMERASE
BOVINE VIRAL DIARRHEA VIRUS CP7-R12 RNA-DEPENDENT RNA POLYMERASE
 0.07 14.52 0.26 552-847 X-ray 2.60 monomer HHblits 0.28
1s4f.1.A
RNA-dependent RNA polymerase
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)
 0.07 14.64 0.26 552-846 X-ray 3.00 monomer HHblits 0.28
1s4f.2.A
RNA-dependent RNA polymerase
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)
 0.07 14.64 0.26 552-846 X-ray 3.00 monomer HHblits 0.28
1s4f.3.A
RNA-dependent RNA polymerase
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)
 0.07 14.64 0.26 552-846 X-ray 3.00 monomer HHblits 0.28
1s4f.4.A
RNA-dependent RNA polymerase
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)
 0.07 14.64 0.26 552-846 X-ray 3.00 monomer HHblits 0.28
5zqk.1.A
Non Structural Protein 5
Dengue Virus Non Structural Protein 5
 0.05 17.92 0.26 588-867 X-ray 2.30 monomer 1 x SAM, 2 x ZN HHblits 0.27
5yf8.1.A
RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A-E472A mutant)
 0.07 14.83 0.25 552-845 X-ray 3.40 monomer HHblits 0.28
6ae7.1.A
RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-672, E472A mutant)
 0.07 14.83 0.25 552-845 X-ray 3.80 monomer HHblits 0.28
4khr.1.A
NS5B RNA-dependent RNA polymerase
HCV NS5B GT1A C316Y with GSK5852
 0.07 16.17 0.25 552-846 X-ray 2.45 monomer 1 x 1PV HHblits 0.28
4khm.1.A
HCV Polymerase
HCV NS5B GT1A with GSK5852
 0.07 16.24 0.25 553-846 X-ray 1.70 monomer 1 x 1PV HHblits 0.27
5i61.1.A
Potential RNA-dependent RNA polymerase
Crystal structure of the RNA-dependent RNA polymerase of a human picorbirnavirus
 0.07 12.02 0.25 550-847 X-ray 2.40 monomer HHblits 0.26
5i61.2.A
Potential RNA-dependent RNA polymerase
Crystal structure of the RNA-dependent RNA polymerase of a human picorbirnavirus
 0.07 12.02 0.25 550-847 X-ray 2.40 monomer HHblits 0.26
5i62.1.A
Potential RNA-dependent RNA polymerase
Crystal structure of the insertion loop deletion mutant of the RNA-dependent RNA polymerase of a human picorbirnavirus
 0.08 12.02 0.25 550-847 X-ray 2.00 monomer HHblits 0.26
4k6m.1.A
Polyprotein
Crystal Structure of the full-length Japanese encephalitis virus NS5
 0.05 18.35 0.23 611-867 X-ray 2.60 monomer 1 x SAH, 2 x ZN HHblits 0.28
3gsz.1.A
RNA-directed RNA polymerase
Structure of the genotype 2B HCV polymerase
 0.06 13.06 0.24 605-885 X-ray 1.90 monomer HHblits 0.26
5uj2.1.A
Genome polyprotein
Crystal structure of HCV NS5B genotype 2A JFH-1 isolate with S15G E86Q E87Q C223H V321I mutations and Delta8 neta hairpoin loop deletion in complex with GS-639476 (diphsohate version of GS-9813), Mn2+ and symmetrical primer template 5'-AUAAAUUU
 0.06 13.12 0.24 606-885 X-ray 2.90 monomer 3 x MN, 1 x 8B4, 1 x A-U-A-A-A-U-U-U, 1 x A-A-A-U-U-U HHblits 0.26
4e76.1.A
RNA-directed RNA polymerase
Apo crystal structure of HCV NS5B genotype 2A JFH-1 isolate with beta hairpin loop deletion
 0.06 13.57 0.24 605-884 X-ray 2.50 monomer HHblits 0.26
4wt9.1.A
RNA-directed RNA polymerase
APO CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH E86Q E87Q S15G C223H V321I AND DELTA8 MUTATIONS
 0.06 13.21 0.23 605-874 X-ray 2.50 monomer 1 x PG6 HHblits 0.26
4wtc.1.A
RNA-directed RNA polymerase
CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS AND DELTA8 BETA HAIRPIN LOOP DELETION IN COMPLEX WITH CDP, MN2+ AND SYMMETRICAL PRIMER TEMPLATE 5'-AGAAAUUU
 0.06 13.21 0.23 605-874 X-ray 2.75 monomer 3 x MN, 1 x CDP, 1 x A-G-A-A-A-U-U-U, 1 x A-A-A-U-U-U HHblits 0.26
5w2e.1.A
Genome polyprotein
HCV NS5B RNA-dependent RNA polymerase in complex with non-nucleoside inhibitor MK-8876
 0.06 15.31 0.22 603-868 X-ray 2.80 monomer 1 x 9VY HHblits 0.27
2xi2.1.A
RNA-DIRECTED RNA POLYMERASE
HCV-H77 NS5B APO POLYMERASE
 0.06 14.83 0.22 603-868 X-ray 1.80 monomer HHblits 0.27
1gx6.1.A
RNA-DIRECTED RNA POLYMERASE
Hepatitis C Virus RNA polymerase in complex with UTP and manganese
 0.06 15.38 0.22 604-868 X-ray 1.85 homo-dimer 6 x UTP, 8 x MN HHblits 0.27
2wrm.1.A
RNA-DIRECTED RNA POLYMERASE
IDENTIFICATION OF NOVEL ALLOSTERIC INHIBITORS OF HEPATITIS C VIRUS NS5B POLYMERASE THUMB DOMAIN (SITE II) BY STRUCTURE-BASED DESIGN
 0.06 15.46 0.22 605-868 X-ray 1.95 homo-dimer 6 x QQ3 HHblits 0.27
2who.1.A
RNA-DIRECTED RNA POLYMERASE
CRYSTAL STRUCTURE OF HEPATITIS C VIRUS NS5B POLYMERASE FROM 1B GENOTYPE IN COMPLEX WITH A NON-NUCLEOSIDE INHIBITOR
 0.06 15.46 0.22 605-868 X-ray 2.00 monomer 2 x MN, 1 x VGI HHblits 0.27
2giq.1.A
RNA-directed RNA polymerase
Hepatitis C virus RNA-dependent RNA polymerase NS5B with NNI-2 inhibitor
 0.06 15.46 0.22 605-868 X-ray 1.65 monomer 1 x NN2 HHblits 0.27
2o5d.1.A
HCV
Thiazolone-acylsulfonamides as novel HCV NS5B polymerase allosteric inhibitors: Convergence of structure-based drug design and X-ray crystallographic study
 0.07 15.46 0.22 605-868 X-ray 2.20 monomer 1 x VR1 HHblits 0.27
2wcx.1.A
RNA-DIRECTED RNA POLYMERASE
CRYSTAL STRUCTURE OF HEPATITIS C VIRUS NS5B POLYMERASE IN COMPLEX WITH THIENOPYRROLE-BASED FINGER-LOOP INHIBITORS
 0.06 15.46 0.22 605-868 X-ray 2.00 monomer 2 x MN, 1 x VGC HHblits 0.27
2d3z.1.A
polyprotein
X-ray crystal structure of hepatitis C virus RNA-dependent RNA polymerase in complex with non-nucleoside analogue inhibitor
 0.06 14.98 0.22 604-867 X-ray 1.80 monomer 1 x FIH HHblits 0.27
4eo6.1.A
RNA-directed RNA polymerase
HCV NS5B polymerase inhibitors: Tri-substituted acylhydrazines as tertiary amide bioisosteres
 0.06 14.98 0.22 604-867 X-ray 1.79 monomer 1 x 0S2 HHblits 0.27
3qgi.1.A
RNA-directed RNA polymerase
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase genotype 1a complex with N-[(2S)-butan-2-yl]-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide
 0.06 14.98 0.22 605-868 X-ray 1.80 monomer 1 x 33F HHblits 0.27
1csj.1.A
HEPATITIS C VIRUS RNA POLYMERASE (NS5B)
CRYSTAL STRUCTURE OF THE RNA-DEPENDENT RNA POLYMERASE OF HEPATITIS C VIRUS
 0.06 14.98 0.22 604-867 X-ray 2.80 homo-dimer HHblits 0.27
4kb7.1.A
HCV Polymerase
HCV NS5B GT1B N316Y with CMPD 32
 0.06 15.05 0.22 605-867 X-ray 1.85 monomer 1 x 690 HHblits 0.27
2dxs.1.A
Genome polyprotein
Crystal structure of HCV NS5B RNA polymerase complexed with a tetracyclic inhibitor
 0.06 15.05 0.22 605-867 X-ray 2.20 monomer 1 x JTP HHblits 0.27
1nhu.1.A
HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE
Hepatitis C virus RNA polymerase in complex with non-nucleoside analogue inhibitor
 0.06 15.05 0.22 605-867 X-ray 2.00 monomer 1 x 153 HHblits 0.27
3hhk.1.A
HCV NS5 polymerase
HCV NS5b polymerase complex with a substituted benzothiadizine
 0.06 15.05 0.22 605-867 X-ray 1.70 monomer 1 x 77Z HHblits 0.27
4tn2.1.A
Genome polyprotein
NS5b in complex with lactam-thiophene carboxylic acids
 0.07 15.05 0.22 605-867 X-ray 2.70 monomer 1 x 33J HHblits 0.27
4txs.1.A
Polyprotein
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline
 0.06 15.05 0.22 605-867 X-ray 2.78 monomer 1 x 3AQ HHblits 0.27
2awz.1.A
Genome polyprotein
Hepatitis C Virus NS5b RNA Polymerase in complex with a covalent inhibitor (5h)
 0.06 15.05 0.22 605-867 X-ray 2.15 monomer 1 x 5H HHblits 0.27
2zku.1.A
Genome polyprotein
Structure of hepatitis C virus NS5B polymerase in a new crystal form
 0.06 15.05 0.22 605-867 X-ray 1.95 monomer HHblits 0.27
4ty8.2.A
Polyprotein
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline
 0.06 15.05 0.22 605-867 X-ray 2.78 monomer 1 x 3AV HHblits 0.27
4ty9.1.A
Polyprotein
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline
 0.06 15.05 0.22 605-867 X-ray 2.78 monomer 1 x 3B0 HHblits 0.27
3cwj.1.A
RNA-DIRECTED RNA POLYMERASE
Crystal structure of hcv ns5b polymerase with a novel pyridazinone inhibitor
 0.06 15.12 0.22 604-865 X-ray 2.40 monomer 1 x 321 HHblits 0.27
2qe5.1.A
RNA-directed RNA polymerase
Structure of HCV NS5B Bound to an Anthranilic Acid Inhibitor
 0.06 15.12 0.22 604-865 X-ray 2.60 monomer 1 x 617 HHblits 0.27
2qe2.1.A
RNA-directed RNA polymerase
Structure of HCV NS5B Bound to an Anthranilic Acid Inhibitor
 0.06 15.12 0.22 604-865 X-ray 2.90 monomer 1 x 452 HHblits 0.27
3vqs.1.A
RNA-directed RNA polymerase
Crystal structure of HCV NS5B RNA polymerase with a novel piperazine inhibitor
 0.07 15.12 0.22 604-865 X-ray 1.90 monomer 1 x JT1 HHblits 0.27
3vqs.2.A
RNA-directed RNA polymerase
Crystal structure of HCV NS5B RNA polymerase with a novel piperazine inhibitor
 0.07 15.12 0.22 604-865 X-ray 1.90 monomer 1 x JT1 HHblits 0.27
2gc8.1.A
RNA-directed RNA polymerase
Structure of a Proline Sulfonamide Inhibitor Bound to HCV NS5b Polymerase
 0.07 15.12 0.22 604-865 X-ray 2.20 monomer 1 x 885 HHblits 0.27
1yvx.1.A
RNA dependent RNA polymerase
Hepatitis C Virus RNA Polymerase Genotype 2a In Complex With Non- Nucleoside Analogue Inhibitor
 0.06 13.11 0.22 606-870 X-ray 2.00 monomer 1 x IPC HHblits 0.26
1yuy.1.A
RNA-Dependent RNA polymerase
HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE GENOTYPE 2a
 0.06 13.11 0.22 606-870 X-ray 1.90 monomer HHblits 0.26
3mf5.1.A
RNA-directed RNA polymerase
Hepatitis C virus polymerase NS5B (BK) with amide bioisostere thumb site inhibitor
 0.06 15.12 0.22 606-867 X-ray 2.00 homo-dimer 2 x HJZ HHblits 0.27
3i5k.1.A
RNA-directed RNA polymerase
Crystal structure of the NS5B polymerase from Hepatitis C Virus (HCV) strain JFH1
 0.06 14.15 0.22 605-868 X-ray 2.20 monomer HHblits 0.27
5twm.1.A
NS5B RNA-dependent RNA POLYMERASE
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS GENOTYPE 2A STRAIN JFH1 L30S NS5B RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH 5-[3-(tert-butylcarbamoyl)phenyl]-6-(ethylamino)-2-(4-fluorophenyl)-N-methylfuro[2,3-b]pyridine-3-carboxamide
 0.06 14.15 0.22 605-868 X-ray 1.97 monomer 1 x 7NG, 1 x PE5 HHblits 0.27
5qj0.1.A
RNA-dependent RNA polymerase
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS GENOTYPE 2A STRAIN JFH1 NS5B RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH 6-[ethyl(methylsulfonyl)amino]-2-(4-fluorophenyl)-N-methyl-5-(3-{[1-(pyrimidin-2-yl)cyclopropyl]carbamoyl}phenyl)-1-benzofuran-3-carboxamide
 0.06 14.15 0.22 605-868 X-ray 2.08 monomer 1 x J6D, 1 x 2PE HHblits 0.27
5qj1.1.A
RNA-dependent RNA polymerase
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS GENOTYPE 2A STRAIN JFH1 L30S NS5B RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH 6-(ethylamino)-2-(4-fluorophenyl)-5-(3-{[1-(5-fluoropyrimidin-2-yl)cyclopropyl]carbamoyl}-4-methoxyphenyl)-N-methyl-1-benzofuran-3-carboxamide
 0.05 14.15 0.22 605-868 X-ray 2.17 monomer 1 x J6J HHblits 0.27
2xym.1.A
RNA-DIRECTED RNA POLYMERASE
HCV-JFH1 NS5B T385A MUTANT
 0.06 14.22 0.22 606-868 X-ray 1.77 homo-dimer HHblits 0.27
1yvf.1.A
HCV NS5B POLYMERASE
Hepatitis C virus NS5B RNA-dependent RNA polymerase complex with inhibitor PHA-00729145
 0.06 14.63 0.22 606-867 X-ray 2.50 monomer 1 x PH7 HHblits 0.26
3fql.1.A
RNA-directed RNA polymerase
Hepatitis C virus polymerase NS5B (CON1 1-570) with HCV-796 inhibitor
 0.06 14.71 0.22 606-867 X-ray 1.80 monomer 1 x 79Z HHblits 0.26
3hkw.1.A
NS5B RNA-dependent RNA polymerase
HCV NS5B genotype 1a in complex with 1,5 benzodiazepine inhibitor 6
 0.06 14.29 0.22 604-863 X-ray 1.55 monomer 1 x IX6 HHblits 0.27
4tlr.1.A
NS5b
NS5b in complex with lactam-thiophene carboxylic acids
 0.05 14.85 0.22 606-865 X-ray 1.86 monomer 1 x 33H, 1 x 79Z HHblits 0.27
7ziu.1.A
Genome polyprotein
Crystal structure of Ntaya virus NS5 polymerase domain
 0.04 17.26 0.18 673-867 X-ray 2.80 monomer 2 x ZN HHblits 0.30
7ziu.2.A
Genome polyprotein
Crystal structure of Ntaya virus NS5 polymerase domain
 0.04 17.26 0.18 673-867 X-ray 2.80 monomer 2 x ZN HHblits 0.30
4mtp.1.A
RNA dependent RNA polymerase
RdRp from Japanesese Encephalitis Virus
 0.04 18.07 0.18 672-867 X-ray 3.65 monomer 2 x ZN HHblits 0.29
4hdg.1.A
Polyprotein
Crystal Structure of viral RdRp in complex with GTP
 0.04 18.07 0.18 672-867 X-ray 2.38 monomer 1 x GTP, 2 x ZN HHblits 0.29
5k5m.1.A
RNA Dependent RNA Polymerase
Co-Crystal Structure of Dengue Virus Serotype 2 RNA Dependent RNA Polymerase with Compound 27
 0.04 17.96 0.18 672-867 X-ray 2.01 monomer 2 x ZN, 1 x 68T, 1 x MES HHblits 0.28
6izx.1.A
Genome polyprotein
The RNA-dependent RNA polymerase domain of dengue 2 NS5, bound with RK-0404678
 0.04 17.96 0.18 672-867 X-ray 2.43 monomer 2 x ZN, 9 x CO, 2 x B5C HHblits 0.28
6izy.1.A
Genome polyprotein
The RNA-dependent RNA polymerase domain of dengue 2 NS5
 0.04 17.96 0.18 672-867 X-ray 2.11 monomer 4 x CO, 1 x ZN HHblits 0.28
6izz.1.A
Genome polyprotein
The RNA-dependent RNA polymerase domain of dengue 3 NS5, bound with RK-0404678
 0.04 18.18 0.18 672-867 X-ray 1.97 monomer 2 x ZN, 1 x B5C HHblits 0.28
6j00.1.A
Genome polyprotein
The RNA-dependent RNA polymerase domain of dengue 3 NS5
 0.04 18.18 0.18 672-867 X-ray 2.14 monomer 2 x ZN HHblits 0.28
6kr2.1.A
Genome polyprotein
Crystal structure of Dengue virus nonstructural protein NS5 (form 1)
 0.04 18.18 0.18 673-867 X-ray 3.06 monomer 2 x ZN, 1 x SAH HHblits 0.28
6kr3.1.A
Genome polyprotein
Crystal structure of Dengue virus nonstructural protein NS5 (form 2)
 0.04 18.18 0.18 673-867 X-ray 2.93 monomer 2 x SAH, 2 x ZN HHblits 0.28
4c11.1.A
DENGUE VIRUS TYPE 3 RNA DEPENDENT RNA POLYMERASE
Dengue virus RNA dependent RNA polymerase with residues from the NS5 linker region
 0.04 17.58 0.18 672-867 X-ray 2.60 hetero-1-1-mer 4 x ZN HHblits 0.27
2j7w.1.A
POLYPROTEIN
DENGUE VIRUS NS5 RNA DEPENDENT RNA POLYMERASE DOMAIN COMPLEXED WITH 3'DGTP
 0.04 17.58 0.18 672-867 X-ray 2.60 monomer 2 x ZN, 1 x GTP HHblits 0.27
4hhj.1.A
Non-structural protein 5
Dengue serotype 3 RNA-dependent RNA polymerase
 0.04 17.58 0.18 672-867 X-ray 1.79 monomer 2 x ZN HHblits 0.27
3vws.1.A
Non-structural protein 5
Dengue serotype 3 RNA-dependent RNA polymerase bound to NITD-107
 0.04 17.58 0.18 672-867 X-ray 2.10 monomer 2 x ZN, 2 x VWS HHblits 0.27
5iq6.1.A
RNA dependent RNA polymerase
Crystal structure of Dengue virus serotype 3 RNA dependent RNA polymerase bound to HeE1-2Tyr, a new pyridobenzothizole inhibitor
 0.04 17.58 0.18 672-867 X-ray 3.00 monomer 2 x ZN, 1 x 6CJ HHblits 0.27
4c11.1.B
DENGUE VIRUS TYPE 3 RNA DEPENDENT RNA POLYMERASE
Dengue virus RNA dependent RNA polymerase with residues from the NS5 linker region
 0.04 17.68 0.18 673-867 X-ray 2.60 hetero-1-1-mer 4 x ZN HHblits 0.28
5u0b.1.A
Genome polyprotein
Structure of full-length Zika virus NS5
 0.04 15.85 0.18 672-867 X-ray 3.00 monomer 1 x SAH, 2 x ZN HHblits 0.27
5dto.1.A
NS5
Dengue virus full length NS5 complexed with viral Cap 0-RNA and SAH
 0.04 18.52 0.17 671-867 X-ray 2.60 monomer 2 x ZN, 1 x SAH, 1 x MG, 1 x M7G, 1 x A-G-U-U HHblits 0.28
5jjs.1.A
Genome polyprotein
Dengue 3 NS5 protein with compound 27
 0.04 18.52 0.17 671-867 X-ray 1.65 monomer 2 x ZN, 1 x 6L2, 1 x MG, 1 x SAH HHblits 0.28
5u0c.1.A
NS5 RNA polymerase domain
Structure of Zika virus NS5 RNA polymerase domain
 0.05 15.85 0.18 672-867 X-ray 3.00 monomer 2 x ZN HHblits 0.27
5u0c.3.A
NS5 RNA polymerase domain
Structure of Zika virus NS5 RNA polymerase domain
 0.04 15.85 0.18 672-867 X-ray 3.00 monomer 2 x ZN HHblits 0.27
5u0c.4.A
NS5 RNA polymerase domain
Structure of Zika virus NS5 RNA polymerase domain
 0.04 15.85 0.18 672-867 X-ray 3.00 monomer 2 x ZN HHblits 0.27
6ux2.1.B
Nonstructural Protein 5
Crystal structure of ZIKV RdRp in complex with STAT2
 0.05 15.85 0.18 672-867 X-ray 3.01 hetero-1-1-mer 2 x ZN HHblits 0.27
4v0r.1.A
NS5 POLYMERASE
DENGUE VIRUS FULL LENGTH NS5 COMPLEXED WITH GTP AND SAH
 0.04 18.52 0.17 671-867 X-ray 2.40 homo-dimer 4 x ZN, 2 x SAH, 2 x GTP, 2 x MG HHblits 0.28
6ld2.1.A
RNA-directed RNA polymerase NS5
Zika NS5 polymerase domain
 0.04 15.95 0.17 673-867 X-ray 1.40 monomer 2 x ZN, 1 x KY3 HHblits 0.27
6ld1.1.A
RNA-directed RNA polymerase NS5
Zika NS5 polymerase domain
 0.04 15.95 0.17 673-867 X-ray 1.40 monomer 2 x ZN HHblits 0.27
5ccv.1.A
RNA-directed RNA polymerase NS5
Crystal structure of full-length NS5 from dengue virus type 3
 0.04 18.75 0.17 673-867 X-ray 3.60 monomer 2 x ZN, 1 x SAH HHblits 0.29
5ccv.2.A
RNA-directed RNA polymerase NS5
Crystal structure of full-length NS5 from dengue virus type 3
 0.04 18.75 0.17 673-867 X-ray 3.60 monomer 2 x ZN, 1 x SAH HHblits 0.29
5ccv.3.A
RNA-directed RNA polymerase NS5
Crystal structure of full-length NS5 from dengue virus type 3
 0.04 18.75 0.17 673-867 X-ray 3.60 monomer 2 x ZN, 1 x SAH HHblits 0.29
5ccv.5.A
RNA-directed RNA polymerase NS5
Crystal structure of full-length NS5 from dengue virus type 3
 0.04 18.75 0.17 673-867 X-ray 3.60 monomer 2 x ZN, 1 x SAH HHblits 0.29
5ccv.8.A
RNA-directed RNA polymerase NS5
Crystal structure of full-length NS5 from dengue virus type 3
 0.04 18.75 0.17 673-867 X-ray 3.60 monomer 2 x ZN, 1 x SAH HHblits 0.29
8fm9.1.M
RNA-directed RNA polymerase
Nodavirus RNA replication proto-crown, detergent-solubliized C12 multimer
 0.03 14.38 0.16 539-702 EM 0.00 homo-24-mer HHblits 0.28
7xd8.1.A
NS5
Crystal Structure of Dengue Virus Serotype 2 (DENV2) Polymerase Elongation Complex (Native Form)
 0.04 17.93 0.16 673-846 X-ray 2.85 monomer 2 x ZN, 1 x G-G-A-U-A-U-A-A-U HHblits 0.29
7d6n.1.A
Tick-borne encephalitis virus RNA-dependent RNA polymerase
Crystal structure of tick-borne encephalitis virus RNA-dependent RNA polymerase
 0.04 19.01 0.15 675-846 X-ray 3.17 homo-10-mer 20 x ZN, 10 x MG HHblits 0.30
5tfr.1.A
Genome polyprotein
Crystal structure of Zika Virus NS5 protein
 0.03 16.08 0.15 672-846 X-ray 3.05 monomer 1 x SAH, 2 x ZN HHblits 0.28
5tmh.1.A
Polyprotein
Structure of Zika virus NS5
 0.03 16.20 0.15 672-845 X-ray 3.28 monomer 1 x SAH, 2 x ZN HHblits 0.28
6wcz.1.B
Non-structural protein 5
CryoEM structure of full-length ZIKV NS5-hSTAT2 complex
 0.03 16.20 0.15 673-846 EM 0.00 hetero-1-1-mer 2 x ZN HHblits 0.28
6iii.1.A
UPF0061 protein YdiU
Crystal structure of an uncharacterized protein
 0.00 28.21 0.04 185-223 X-ray 2.11 monomer 1 x 2PN, 1 x AMP, 2 x MG HHblits 0.34