Putative ORF3d protein

Created: May 5, 2023, 9:33 p.m. at 21:33

Models Name Description GMQE QSQE Seq Id Coverage Range Method Resolution Oligo-state Ligands Found by Seq Similarity
1x3w.1.A
peptide:N-glycanase
Structure of a peptide:N-glycanase-Rad23 complex
0.48 0.00 24.44 0.79 5-50 X-ray 3.00 monomer 1 x ZN, 3 x GLC-FRU HHblits 0.33
3esw.1.A
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
Complex of yeast PNGase with GlcNAc2-IAc.
0.46 0.00 24.44 0.79 5-50 X-ray 3.40 monomer 1 x ZN, 1 x NAG-NAG HHblits 0.33
2f4m.1.A
peptide N-glycanase
The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs
0.47 0.00 20.45 0.77 6-49 X-ray 1.85 monomer 1 x ZN HHblits 0.32
2f4o.2.A
peptide N-glycanase
The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs
0.47 0.00 20.45 0.77 6-49 X-ray 2.26 monomer 4 x ZN, 2 x PHQ-VAL-ALA-ASP-CF0 HHblits 0.32
3gkh.1.A
Niemann-Pick C1 protein
NPC1(NTD)
0.14 0.00 19.35 0.54 8-38 X-ray 1.81 monomer 1 x NAG, 1 x NAG-NAG HHblits 0.33
7xxf.1.A
Photosynthetic reaction center cytochrome c subunit
Structure of photosynthetic LH1-RC super-complex of Rhodopila globiformis
0.11 0.00 28.00 0.44 5-29 EM 0.00 monomer 4 x HEC, 18 x PGV, 36 x BCL, 2 x BPH, 4 x U10, 5 x LMT, 1 x FE, 1 x MQ9, 17 x I7D, 9 x CDL, 1 x PEE HHblits 0.33
1s72.1.1
50S ribosomal protein L37Ae
REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
0.07 19.05 0.37 5-25 X-ray 2.40 hetero-oligomer 15 x MG, 1 x K, 5 x CD HHblits 0.35
1yj9.1.1
50S ribosomal protein L37Ae
Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22
0.06 22.22 0.32 5-22 X-ray 2.80 hetero-oligomer 18 x MG, 1 x K, 5 x CD HHblits 0.39