Local Distance Difference Test

Workspace for : Example_2

Results

Log - Click to open the log.

INFO - Calculation started
INFO - Checking input files
INFO - Checking model file
INFO - Checking if file is a valid compressed archive
INFO - T0542TS236_1_clean.pdb does not appear to be a valid compressed archive
INFO - Checking if file is a valid PDB file
INFO - Checking reference file
INFO - Checking if file is a valid compressed archive
INFO - T0542.pdb does not appear to be a valid compressed archive
INFO - Checking if file is a valid PDB file
INFO - Input correctly processed
INFO - Structure pre-processing started
INFO - Your input consists in 1 MODELS.
INFO - Pre-processing model T0542TS236_1_clean.pdb
INFO - Your input consists in 1 REFERENCES.
INFO - Pre-processing Reference T0542.pdb
INFO - Structure pre-processing done
INFO - Running lDDT and generating plots
INFO - Running lDDT for T0542TS236_1_clean.pdb_preprocessed
INFO - lDDT for T0542TS236_1_clean.pdb_preprocessed correctly calculated!
INFO - Finished

If you use local distance difference test (lDDT), please cite the following reference:
  • Mariani V., Biasini M., Barbato A., and Schwede T. (2013). lDDT: A local superposition-free score for comparing protein structures and models using distance difference tests. Bioinformatics. Bioinformatics 29 (21), 2722-2728. PubMed