data_SMR-559c1505ca5ca7cf4c05f1e46c4ee3f3_2
_entry.id SMR-559c1505ca5ca7cf4c05f1e46c4ee3f3_2
_struct.entry_id SMR-559c1505ca5ca7cf4c05f1e46c4ee3f3_2
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - Q86YJ5/ MARH9_HUMAN, E3 ubiquitin-protein ligase MARCHF9

Estimated model accuracy of this model is 0.017, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries Q86YJ5'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 5 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 44033.103 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP MARH9_HUMAN Q86YJ5 1
;MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAG
DKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCL
IRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPS
AKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAG
KSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV
;
'E3 ubiquitin-protein ligase MARCHF9'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 346 1 346
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . MARH9_HUMAN Q86YJ5 . 1 346 9606 'Homo sapiens (Human)' 2004-03-01
FA6142B973A359B8
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A
;MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAG
DKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCL
IRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPS
AKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAG
KSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV
;

;MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAG
DKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCL
IRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPS
AKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAG
KSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 LEU .
1 3 LYS .
1 4 SER .
1 5 ARG .
1 6 LEU .
1 7 ARG .
1 8 MET .
1 9 PHE .
1 10 LEU .
1 11 ASN .
1 12 GLU .
1 13 LEU .
1 14 LYS .
1 15 LEU .
1 16 LEU .
1 17 VAL .
1 18 LEU .
1 19 THR .
1 20 GLY .
1 21 GLY .
1 22 GLY .
1 23 ARG .
1 24 PRO .
1 25 ARG .
1 26 ALA .
1 27 GLU .
1 28 PRO .
1 29 GLN .
1 30 PRO .
1 31 ARG .
1 32 GLY .
1 33 GLY .
1 34 ARG .
1 35 GLY .
1 36 GLY .
1 37 GLY .
1 38 CYS .
1 39 GLY .
1 40 TRP .
1 41 ALA .
1 42 PRO .
1 43 PHE .
1 44 ALA .
1 45 GLY .
1 46 CYS .
1 47 SER .
1 48 THR .
1 49 ARG .
1 50 ASP .
1 51 GLY .
1 52 ASP .
1 53 GLY .
1 54 ASP .
1 55 GLU .
1 56 GLU .
1 57 GLU .
1 58 TYR .
1 59 TYR .
1 60 GLY .
1 61 SER .
1 62 GLU .
1 63 PRO .
1 64 ARG .
1 65 ALA .
1 66 ARG .
1 67 GLY .
1 68 LEU .
1 69 ALA .
1 70 GLY .
1 71 ASP .
1 72 LYS .
1 73 GLU .
1 74 PRO .
1 75 ARG .
1 76 ALA .
1 77 GLY .
1 78 PRO .
1 79 LEU .
1 80 PRO .
1 81 PRO .
1 82 PRO .
1 83 ALA .
1 84 PRO .
1 85 PRO .
1 86 LEU .
1 87 PRO .
1 88 PRO .
1 89 PRO .
1 90 GLY .
1 91 ALA .
1 92 LEU .
1 93 ASP .
1 94 ALA .
1 95 LEU .
1 96 SER .
1 97 LEU .
1 98 SER .
1 99 SER .
1 100 SER .
1 101 LEU .
1 102 ASP .
1 103 SER .
1 104 GLY .
1 105 LEU .
1 106 ARG .
1 107 THR .
1 108 PRO .
1 109 GLN .
1 110 CYS .
1 111 ARG .
1 112 ILE .
1 113 CYS .
1 114 PHE .
1 115 GLN .
1 116 GLY .
1 117 PRO .
1 118 GLU .
1 119 GLN .
1 120 GLY .
1 121 GLU .
1 122 LEU .
1 123 LEU .
1 124 SER .
1 125 PRO .
1 126 CYS .
1 127 ARG .
1 128 CYS .
1 129 ASP .
1 130 GLY .
1 131 SER .
1 132 VAL .
1 133 ARG .
1 134 CYS .
1 135 THR .
1 136 HIS .
1 137 GLN .
1 138 PRO .
1 139 CYS .
1 140 LEU .
1 141 ILE .
1 142 ARG .
1 143 TRP .
1 144 ILE .
1 145 SER .
1 146 GLU .
1 147 ARG .
1 148 GLY .
1 149 SER .
1 150 TRP .
1 151 SER .
1 152 CYS .
1 153 GLU .
1 154 LEU .
1 155 CYS .
1 156 TYR .
1 157 PHE .
1 158 LYS .
1 159 TYR .
1 160 GLN .
1 161 VAL .
1 162 LEU .
1 163 ALA .
1 164 ILE .
1 165 SER .
1 166 THR .
1 167 LYS .
1 168 ASN .
1 169 PRO .
1 170 LEU .
1 171 GLN .
1 172 TRP .
1 173 GLN .
1 174 ALA .
1 175 ILE .
1 176 SER .
1 177 LEU .
1 178 THR .
1 179 VAL .
1 180 ILE .
1 181 GLU .
1 182 LYS .
1 183 VAL .
1 184 GLN .
1 185 ILE .
1 186 ALA .
1 187 ALA .
1 188 ILE .
1 189 VAL .
1 190 LEU .
1 191 GLY .
1 192 SER .
1 193 LEU .
1 194 PHE .
1 195 LEU .
1 196 VAL .
1 197 ALA .
1 198 SER .
1 199 ILE .
1 200 SER .
1 201 TRP .
1 202 LEU .
1 203 ILE .
1 204 TRP .
1 205 SER .
1 206 SER .
1 207 LEU .
1 208 SER .
1 209 PRO .
1 210 SER .
1 211 ALA .
1 212 LYS .
1 213 TRP .
1 214 GLN .
1 215 ARG .
1 216 GLN .
1 217 ASP .
1 218 LEU .
1 219 LEU .
1 220 PHE .
1 221 GLN .
1 222 ILE .
1 223 CYS .
1 224 TYR .
1 225 GLY .
1 226 MET .
1 227 TYR .
1 228 GLY .
1 229 PHE .
1 230 MET .
1 231 ASP .
1 232 VAL .
1 233 VAL .
1 234 CYS .
1 235 ILE .
1 236 GLY .
1 237 LEU .
1 238 ILE .
1 239 ILE .
1 240 HIS .
1 241 GLU .
1 242 GLY .
1 243 SER .
1 244 SER .
1 245 VAL .
1 246 TYR .
1 247 ARG .
1 248 ILE .
1 249 PHE .
1 250 LYS .
1 251 ARG .
1 252 TRP .
1 253 GLN .
1 254 ALA .
1 255 VAL .
1 256 ASN .
1 257 GLN .
1 258 GLN .
1 259 TRP .
1 260 LYS .
1 261 VAL .
1 262 LEU .
1 263 ASN .
1 264 TYR .
1 265 ASP .
1 266 LYS .
1 267 THR .
1 268 LYS .
1 269 ASP .
1 270 ILE .
1 271 GLY .
1 272 GLY .
1 273 ASP .
1 274 ALA .
1 275 GLY .
1 276 GLY .
1 277 GLY .
1 278 THR .
1 279 ALA .
1 280 GLY .
1 281 LYS .
1 282 SER .
1 283 GLY .
1 284 PRO .
1 285 ARG .
1 286 ASN .
1 287 SER .
1 288 ARG .
1 289 THR .
1 290 GLY .
1 291 PRO .
1 292 THR .
1 293 SER .
1 294 GLY .
1 295 ALA .
1 296 THR .
1 297 SER .
1 298 ARG .
1 299 PRO .
1 300 PRO .
1 301 ALA .
1 302 ALA .
1 303 GLN .
1 304 ARG .
1 305 MET .
1 306 ARG .
1 307 THR .
1 308 LEU .
1 309 LEU .
1 310 PRO .
1 311 GLN .
1 312 ARG .
1 313 CYS .
1 314 GLY .
1 315 TYR .
1 316 THR .
1 317 ILE .
1 318 LEU .
1 319 HIS .
1 320 LEU .
1 321 LEU .
1 322 GLY .
1 323 GLN .
1 324 LEU .
1 325 ARG .
1 326 PRO .
1 327 PRO .
1 328 ASP .
1 329 ALA .
1 330 ARG .
1 331 SER .
1 332 SER .
1 333 SER .
1 334 HIS .
1 335 SER .
1 336 GLY .
1 337 ARG .
1 338 GLU .
1 339 VAL .
1 340 VAL .
1 341 MET .
1 342 ARG .
1 343 VAL .
1 344 THR .
1 345 THR .
1 346 VAL .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? A .
A 1 2 LEU 2 ? ? ? A .
A 1 3 LYS 3 ? ? ? A .
A 1 4 SER 4 ? ? ? A .
A 1 5 ARG 5 ? ? ? A .
A 1 6 LEU 6 ? ? ? A .
A 1 7 ARG 7 ? ? ? A .
A 1 8 MET 8 ? ? ? A .
A 1 9 PHE 9 ? ? ? A .
A 1 10 LEU 10 ? ? ? A .
A 1 11 ASN 11 ? ? ? A .
A 1 12 GLU 12 ? ? ? A .
A 1 13 LEU 13 ? ? ? A .
A 1 14 LYS 14 ? ? ? A .
A 1 15 LEU 15 ? ? ? A .
A 1 16 LEU 16 ? ? ? A .
A 1 17 VAL 17 ? ? ? A .
A 1 18 LEU 18 ? ? ? A .
A 1 19 THR 19 ? ? ? A .
A 1 20 GLY 20 ? ? ? A .
A 1 21 GLY 21 ? ? ? A .
A 1 22 GLY 22 ? ? ? A .
A 1 23 ARG 23 ? ? ? A .
A 1 24 PRO 24 ? ? ? A .
A 1 25 ARG 25 ? ? ? A .
A 1 26 ALA 26 ? ? ? A .
A 1 27 GLU 27 ? ? ? A .
A 1 28 PRO 28 ? ? ? A .
A 1 29 GLN 29 ? ? ? A .
A 1 30 PRO 30 ? ? ? A .
A 1 31 ARG 31 ? ? ? A .
A 1 32 GLY 32 ? ? ? A .
A 1 33 GLY 33 ? ? ? A .
A 1 34 ARG 34 ? ? ? A .
A 1 35 GLY 35 ? ? ? A .
A 1 36 GLY 36 ? ? ? A .
A 1 37 GLY 37 ? ? ? A .
A 1 38 CYS 38 ? ? ? A .
A 1 39 GLY 39 ? ? ? A .
A 1 40 TRP 40 ? ? ? A .
A 1 41 ALA 41 ? ? ? A .
A 1 42 PRO 42 ? ? ? A .
A 1 43 PHE 43 ? ? ? A .
A 1 44 ALA 44 ? ? ? A .
A 1 45 GLY 45 ? ? ? A .
A 1 46 CYS 46 ? ? ? A .
A 1 47 SER 47 ? ? ? A .
A 1 48 THR 48 ? ? ? A .
A 1 49 ARG 49 ? ? ? A .
A 1 50 ASP 50 ? ? ? A .
A 1 51 GLY 51 ? ? ? A .
A 1 52 ASP 52 ? ? ? A .
A 1 53 GLY 53 ? ? ? A .
A 1 54 ASP 54 ? ? ? A .
A 1 55 GLU 55 ? ? ? A .
A 1 56 GLU 56 ? ? ? A .
A 1 57 GLU 57 ? ? ? A .
A 1 58 TYR 58 ? ? ? A .
A 1 59 TYR 59 ? ? ? A .
A 1 60 GLY 60 ? ? ? A .
A 1 61 SER 61 ? ? ? A .
A 1 62 GLU 62 ? ? ? A .
A 1 63 PRO 63 ? ? ? A .
A 1 64 ARG 64 ? ? ? A .
A 1 65 ALA 65 ? ? ? A .
A 1 66 ARG 66 ? ? ? A .
A 1 67 GLY 67 ? ? ? A .
A 1 68 LEU 68 ? ? ? A .
A 1 69 ALA 69 ? ? ? A .
A 1 70 GLY 70 ? ? ? A .
A 1 71 ASP 71 ? ? ? A .
A 1 72 LYS 72 ? ? ? A .
A 1 73 GLU 73 ? ? ? A .
A 1 74 PRO 74 ? ? ? A .
A 1 75 ARG 75 ? ? ? A .
A 1 76 ALA 76 ? ? ? A .
A 1 77 GLY 77 ? ? ? A .
A 1 78 PRO 78 ? ? ? A .
A 1 79 LEU 79 ? ? ? A .
A 1 80 PRO 80 ? ? ? A .
A 1 81 PRO 81 ? ? ? A .
A 1 82 PRO 82 ? ? ? A .
A 1 83 ALA 83 ? ? ? A .
A 1 84 PRO 84 ? ? ? A .
A 1 85 PRO 85 ? ? ? A .
A 1 86 LEU 86 ? ? ? A .
A 1 87 PRO 87 ? ? ? A .
A 1 88 PRO 88 ? ? ? A .
A 1 89 PRO 89 ? ? ? A .
A 1 90 GLY 90 ? ? ? A .
A 1 91 ALA 91 ? ? ? A .
A 1 92 LEU 92 ? ? ? A .
A 1 93 ASP 93 ? ? ? A .
A 1 94 ALA 94 ? ? ? A .
A 1 95 LEU 95 ? ? ? A .
A 1 96 SER 96 ? ? ? A .
A 1 97 LEU 97 ? ? ? A .
A 1 98 SER 98 ? ? ? A .
A 1 99 SER 99 ? ? ? A .
A 1 100 SER 100 ? ? ? A .
A 1 101 LEU 101 ? ? ? A .
A 1 102 ASP 102 ? ? ? A .
A 1 103 SER 103 ? ? ? A .
A 1 104 GLY 104 ? ? ? A .
A 1 105 LEU 105 ? ? ? A .
A 1 106 ARG 106 ? ? ? A .
A 1 107 THR 107 ? ? ? A .
A 1 108 PRO 108 ? ? ? A .
A 1 109 GLN 109 ? ? ? A .
A 1 110 CYS 110 ? ? ? A .
A 1 111 ARG 111 ? ? ? A .
A 1 112 ILE 112 ? ? ? A .
A 1 113 CYS 113 ? ? ? A .
A 1 114 PHE 114 ? ? ? A .
A 1 115 GLN 115 ? ? ? A .
A 1 116 GLY 116 ? ? ? A .
A 1 117 PRO 117 ? ? ? A .
A 1 118 GLU 118 ? ? ? A .
A 1 119 GLN 119 ? ? ? A .
A 1 120 GLY 120 ? ? ? A .
A 1 121 GLU 121 ? ? ? A .
A 1 122 LEU 122 ? ? ? A .
A 1 123 LEU 123 ? ? ? A .
A 1 124 SER 124 ? ? ? A .
A 1 125 PRO 125 ? ? ? A .
A 1 126 CYS 126 ? ? ? A .
A 1 127 ARG 127 ? ? ? A .
A 1 128 CYS 128 ? ? ? A .
A 1 129 ASP 129 ? ? ? A .
A 1 130 GLY 130 ? ? ? A .
A 1 131 SER 131 ? ? ? A .
A 1 132 VAL 132 ? ? ? A .
A 1 133 ARG 133 ? ? ? A .
A 1 134 CYS 134 ? ? ? A .
A 1 135 THR 135 ? ? ? A .
A 1 136 HIS 136 ? ? ? A .
A 1 137 GLN 137 ? ? ? A .
A 1 138 PRO 138 ? ? ? A .
A 1 139 CYS 139 ? ? ? A .
A 1 140 LEU 140 ? ? ? A .
A 1 141 ILE 141 ? ? ? A .
A 1 142 ARG 142 ? ? ? A .
A 1 143 TRP 143 ? ? ? A .
A 1 144 ILE 144 ? ? ? A .
A 1 145 SER 145 ? ? ? A .
A 1 146 GLU 146 ? ? ? A .
A 1 147 ARG 147 ? ? ? A .
A 1 148 GLY 148 ? ? ? A .
A 1 149 SER 149 ? ? ? A .
A 1 150 TRP 150 ? ? ? A .
A 1 151 SER 151 ? ? ? A .
A 1 152 CYS 152 ? ? ? A .
A 1 153 GLU 153 ? ? ? A .
A 1 154 LEU 154 ? ? ? A .
A 1 155 CYS 155 ? ? ? A .
A 1 156 TYR 156 ? ? ? A .
A 1 157 PHE 157 ? ? ? A .
A 1 158 LYS 158 ? ? ? A .
A 1 159 TYR 159 ? ? ? A .
A 1 160 GLN 160 ? ? ? A .
A 1 161 VAL 161 ? ? ? A .
A 1 162 LEU 162 ? ? ? A .
A 1 163 ALA 163 ? ? ? A .
A 1 164 ILE 164 ? ? ? A .
A 1 165 SER 165 ? ? ? A .
A 1 166 THR 166 ? ? ? A .
A 1 167 LYS 167 ? ? ? A .
A 1 168 ASN 168 ? ? ? A .
A 1 169 PRO 169 ? ? ? A .
A 1 170 LEU 170 ? ? ? A .
A 1 171 GLN 171 ? ? ? A .
A 1 172 TRP 172 ? ? ? A .
A 1 173 GLN 173 ? ? ? A .
A 1 174 ALA 174 ? ? ? A .
A 1 175 ILE 175 175 ILE ILE A .
A 1 176 SER 176 176 SER SER A .
A 1 177 LEU 177 177 LEU LEU A .
A 1 178 THR 178 178 THR THR A .
A 1 179 VAL 179 179 VAL VAL A .
A 1 180 ILE 180 180 ILE ILE A .
A 1 181 GLU 181 181 GLU GLU A .
A 1 182 LYS 182 182 LYS LYS A .
A 1 183 VAL 183 183 VAL VAL A .
A 1 184 GLN 184 184 GLN GLN A .
A 1 185 ILE 185 185 ILE ILE A .
A 1 186 ALA 186 186 ALA ALA A .
A 1 187 ALA 187 187 ALA ALA A .
A 1 188 ILE 188 188 ILE ILE A .
A 1 189 VAL 189 189 VAL VAL A .
A 1 190 LEU 190 ? ? ? A .
A 1 191 GLY 191 ? ? ? A .
A 1 192 SER 192 ? ? ? A .
A 1 193 LEU 193 ? ? ? A .
A 1 194 PHE 194 ? ? ? A .
A 1 195 LEU 195 ? ? ? A .
A 1 196 VAL 196 ? ? ? A .
A 1 197 ALA 197 ? ? ? A .
A 1 198 SER 198 ? ? ? A .
A 1 199 ILE 199 ? ? ? A .
A 1 200 SER 200 ? ? ? A .
A 1 201 TRP 201 ? ? ? A .
A 1 202 LEU 202 ? ? ? A .
A 1 203 ILE 203 ? ? ? A .
A 1 204 TRP 204 ? ? ? A .
A 1 205 SER 205 ? ? ? A .
A 1 206 SER 206 ? ? ? A .
A 1 207 LEU 207 ? ? ? A .
A 1 208 SER 208 ? ? ? A .
A 1 209 PRO 209 ? ? ? A .
A 1 210 SER 210 ? ? ? A .
A 1 211 ALA 211 ? ? ? A .
A 1 212 LYS 212 ? ? ? A .
A 1 213 TRP 213 ? ? ? A .
A 1 214 GLN 214 ? ? ? A .
A 1 215 ARG 215 ? ? ? A .
A 1 216 GLN 216 ? ? ? A .
A 1 217 ASP 217 ? ? ? A .
A 1 218 LEU 218 ? ? ? A .
A 1 219 LEU 219 ? ? ? A .
A 1 220 PHE 220 ? ? ? A .
A 1 221 GLN 221 ? ? ? A .
A 1 222 ILE 222 ? ? ? A .
A 1 223 CYS 223 ? ? ? A .
A 1 224 TYR 224 ? ? ? A .
A 1 225 GLY 225 ? ? ? A .
A 1 226 MET 226 ? ? ? A .
A 1 227 TYR 227 ? ? ? A .
A 1 228 GLY 228 ? ? ? A .
A 1 229 PHE 229 ? ? ? A .
A 1 230 MET 230 ? ? ? A .
A 1 231 ASP 231 ? ? ? A .
A 1 232 VAL 232 ? ? ? A .
A 1 233 VAL 233 ? ? ? A .
A 1 234 CYS 234 ? ? ? A .
A 1 235 ILE 235 ? ? ? A .
A 1 236 GLY 236 ? ? ? A .
A 1 237 LEU 237 ? ? ? A .
A 1 238 ILE 238 ? ? ? A .
A 1 239 ILE 239 ? ? ? A .
A 1 240 HIS 240 ? ? ? A .
A 1 241 GLU 241 ? ? ? A .
A 1 242 GLY 242 ? ? ? A .
A 1 243 SER 243 ? ? ? A .
A 1 244 SER 244 ? ? ? A .
A 1 245 VAL 245 ? ? ? A .
A 1 246 TYR 246 ? ? ? A .
A 1 247 ARG 247 ? ? ? A .
A 1 248 ILE 248 ? ? ? A .
A 1 249 PHE 249 ? ? ? A .
A 1 250 LYS 250 ? ? ? A .
A 1 251 ARG 251 ? ? ? A .
A 1 252 TRP 252 ? ? ? A .
A 1 253 GLN 253 ? ? ? A .
A 1 254 ALA 254 ? ? ? A .
A 1 255 VAL 255 ? ? ? A .
A 1 256 ASN 256 ? ? ? A .
A 1 257 GLN 257 ? ? ? A .
A 1 258 GLN 258 ? ? ? A .
A 1 259 TRP 259 ? ? ? A .
A 1 260 LYS 260 ? ? ? A .
A 1 261 VAL 261 ? ? ? A .
A 1 262 LEU 262 ? ? ? A .
A 1 263 ASN 263 ? ? ? A .
A 1 264 TYR 264 ? ? ? A .
A 1 265 ASP 265 ? ? ? A .
A 1 266 LYS 266 ? ? ? A .
A 1 267 THR 267 ? ? ? A .
A 1 268 LYS 268 ? ? ? A .
A 1 269 ASP 269 ? ? ? A .
A 1 270 ILE 270 ? ? ? A .
A 1 271 GLY 271 ? ? ? A .
A 1 272 GLY 272 ? ? ? A .
A 1 273 ASP 273 ? ? ? A .
A 1 274 ALA 274 ? ? ? A .
A 1 275 GLY 275 ? ? ? A .
A 1 276 GLY 276 ? ? ? A .
A 1 277 GLY 277 ? ? ? A .
A 1 278 THR 278 ? ? ? A .
A 1 279 ALA 279 ? ? ? A .
A 1 280 GLY 280 ? ? ? A .
A 1 281 LYS 281 ? ? ? A .
A 1 282 SER 282 ? ? ? A .
A 1 283 GLY 283 ? ? ? A .
A 1 284 PRO 284 ? ? ? A .
A 1 285 ARG 285 ? ? ? A .
A 1 286 ASN 286 ? ? ? A .
A 1 287 SER 287 ? ? ? A .
A 1 288 ARG 288 ? ? ? A .
A 1 289 THR 289 ? ? ? A .
A 1 290 GLY 290 ? ? ? A .
A 1 291 PRO 291 ? ? ? A .
A 1 292 THR 292 ? ? ? A .
A 1 293 SER 293 ? ? ? A .
A 1 294 GLY 294 ? ? ? A .
A 1 295 ALA 295 ? ? ? A .
A 1 296 THR 296 ? ? ? A .
A 1 297 SER 297 ? ? ? A .
A 1 298 ARG 298 ? ? ? A .
A 1 299 PRO 299 ? ? ? A .
A 1 300 PRO 300 ? ? ? A .
A 1 301 ALA 301 ? ? ? A .
A 1 302 ALA 302 ? ? ? A .
A 1 303 GLN 303 ? ? ? A .
A 1 304 ARG 304 ? ? ? A .
A 1 305 MET 305 ? ? ? A .
A 1 306 ARG 306 ? ? ? A .
A 1 307 THR 307 ? ? ? A .
A 1 308 LEU 308 ? ? ? A .
A 1 309 LEU 309 ? ? ? A .
A 1 310 PRO 310 ? ? ? A .
A 1 311 GLN 311 ? ? ? A .
A 1 312 ARG 312 ? ? ? A .
A 1 313 CYS 313 ? ? ? A .
A 1 314 GLY 314 ? ? ? A .
A 1 315 TYR 315 ? ? ? A .
A 1 316 THR 316 ? ? ? A .
A 1 317 ILE 317 ? ? ? A .
A 1 318 LEU 318 ? ? ? A .
A 1 319 HIS 319 ? ? ? A .
A 1 320 LEU 320 ? ? ? A .
A 1 321 LEU 321 ? ? ? A .
A 1 322 GLY 322 ? ? ? A .
A 1 323 GLN 323 ? ? ? A .
A 1 324 LEU 324 ? ? ? A .
A 1 325 ARG 325 ? ? ? A .
A 1 326 PRO 326 ? ? ? A .
A 1 327 PRO 327 ? ? ? A .
A 1 328 ASP 328 ? ? ? A .
A 1 329 ALA 329 ? ? ? A .
A 1 330 ARG 330 ? ? ? A .
A 1 331 SER 331 ? ? ? A .
A 1 332 SER 332 ? ? ? A .
A 1 333 SER 333 ? ? ? A .
A 1 334 HIS 334 ? ? ? A .
A 1 335 SER 335 ? ? ? A .
A 1 336 GLY 336 ? ? ? A .
A 1 337 ARG 337 ? ? ? A .
A 1 338 GLU 338 ? ? ? A .
A 1 339 VAL 339 ? ? ? A .
A 1 340 VAL 340 ? ? ? A .
A 1 341 MET 341 ? ? ? A .
A 1 342 ARG 342 ? ? ? A .
A 1 343 VAL 343 ? ? ? A .
A 1 344 THR 344 ? ? ? A .
A 1 345 THR 345 ? ? ? A .
A 1 346 VAL 346 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'ERAD-associated E3 ubiquitin-protein ligase DOA10 {PDB ID=8tqm, label_asym_id=A, auth_asym_id=A, SMTL ID=8tqm.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by BLAST to 8tqm, label_asym_id=A'
'target-template alignment' .
4 'model 2' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-07
6 PDB https://www.wwpdb.org . 2024-11-01
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;MDVDSDVNVSRLRDELHKVANEETDTATFNDDAPSGATCRICRGEATEDNPLFHPCKCRGSIKYMHESCL
LEWVASKNIDISKPGADVKCDICHYPIQFKTIYAENMPEKIPFSLLLSKSILTFFEKARLALTIGLAAVL
YIIGVPLVWNMFGKLYTMMLDGSSPYPGDFLKSLIYGYDQSATPELTTRAIFYQLLQNHSFTSLQFIMIV
ILHIALYFQYDMIVREDVFSKMVFHKIGPRLSPKDLKSRLKERFPMMDDRMVEYLAREMRAHDENRQEQG
HDRLNMPAAAADNNNNVINPRNDNVPPQDPNDHRNFENLRHVDELDHDEATEEHENNDSDNSLPSGDDSS
RILPGSSSDNEEDEEAEGQQQQQQPEEEADYRDHIEPNPIDMWANRRAQNEFDDLIAAQQNAINRPNAPV
FIPPPAQNRAGNVDQDEQDFGAAVGVPPAQANPDDQGQGPLVINLKLKLLNVIAYFIIAVVFTAIYLAIS
YLFPTFIGFGLLKIYFGIFKVILRGLCHLYYLSGAHIAYNGLTKLVPKVDVAMSWISDHLIHDIIYLYNG
YTENTMKHSIFIRALPALTTYLTSVSIVCASSNLVSRGYGRENGMSNPTRRLIFQILFALKCTFKVFTLF
FIELAGFPILAGVMLDFSLFCPILASNSRMLWVPSICAIWPPFSLFVYWTIGTLYMYWFAKYIGMIRKNI
IRPGVLFFIRSPEDPNIKILHDSLIHPMSIQLSRLCLSMFIYAIFIVLGFGFHTRIFFPFMLKSNLLSVP
EAYKPTSIISWKFNTILLTLYFTKRILESSSYVKPLLERYWKTIFKLCSRKLRLSSFILGKDTPTERGHI
VYRNLFYKYIAAKNAEWSNQELFTKPKTLEQAEELFGQVRDVHAYFVPDGVLMRVPSSDIVSRNYVQTMF
VPVTKDDKLLKPLDLERIKERNKRAAGEFGYLDEQNTEYDQYYIVYVPPDFRLRYMTLLGLVWLFASILM
LGVTFISQALINFVCSFGFLPVVKLLLGERNKVYVAWKELSDISYSYLNIYYVCVGSVCLSKIAKDILHF
TEGQNTLDEHAVDENEVEEVEHDIPERDINNAPVNNINNVEEGQGIFMAIFNSIFDSMLVKYNLMVFIAI
MIAVIRTMVSWVVLTDGILACYNYLTIRVFGNSSYTIGNSKWFKYDESLLFVVWIISSMVNFGTGYKSLK
LFFRNRNTSKLNFLKTMALELFKQGFLHMVIYVLPIIILSLVFLRDVSTKQIIDISHGSRSFTLSLNESF
PTWTRMQDIYFGLLIALESFTFFFQATVLFIQWFKSTVQNVKDEVYTKGRALENLPDES
;

;MDVDSDVNVSRLRDELHKVANEETDTATFNDDAPSGATCRICRGEATEDNPLFHPCKCRGSIKYMHESCL
LEWVASKNIDISKPGADVKCDICHYPIQFKTIYAENMPEKIPFSLLLSKSILTFFEKARLALTIGLAAVL
YIIGVPLVWNMFGKLYTMMLDGSSPYPGDFLKSLIYGYDQSATPELTTRAIFYQLLQNHSFTSLQFIMIV
ILHIALYFQYDMIVREDVFSKMVFHKIGPRLSPKDLKSRLKERFPMMDDRMVEYLAREMRAHDENRQEQG
HDRLNMPAAAADNNNNVINPRNDNVPPQDPNDHRNFENLRHVDELDHDEATEEHENNDSDNSLPSGDDSS
RILPGSSSDNEEDEEAEGQQQQQQPEEEADYRDHIEPNPIDMWANRRAQNEFDDLIAAQQNAINRPNAPV
FIPPPAQNRAGNVDQDEQDFGAAVGVPPAQANPDDQGQGPLVINLKLKLLNVIAYFIIAVVFTAIYLAIS
YLFPTFIGFGLLKIYFGIFKVILRGLCHLYYLSGAHIAYNGLTKLVPKVDVAMSWISDHLIHDIIYLYNG
YTENTMKHSIFIRALPALTTYLTSVSIVCASSNLVSRGYGRENGMSNPTRRLIFQILFALKCTFKVFTLF
FIELAGFPILAGVMLDFSLFCPILASNSRMLWVPSICAIWPPFSLFVYWTIGTLYMYWFAKYIGMIRKNI
IRPGVLFFIRSPEDPNIKILHDSLIHPMSIQLSRLCLSMFIYAIFIVLGFGFHTRIFFPFMLKSNLLSVP
EAYKPTSIISWKFNTILLTLYFTKRILESSSYVKPLLERYWKTIFKLCSRKLRLSSFILGKDTPTERGHI
VYRNLFYKYIAAKNAEWSNQELFTKPKTLEQAEELFGQVRDVHAYFVPDGVLMRVPSSDIVSRNYVQTMF
VPVTKDDKLLKPLDLERIKERNKRAAGEFGYLDEQNTEYDQYYIVYVPPDFRLRYMTLLGLVWLFASILM
LGVTFISQALINFVCSFGFLPVVKLLLGERNKVYVAWKELSDISYSYLNIYYVCVGSVCLSKIAKDILHF
TEGQNTLDEHAVDENEVEEVEHDIPERDINNAPVNNINNVEEGQGIFMAIFNSIFDSMLVKYNLMVFIAI
MIAVIRTMVSWVVLTDGILACYNYLTIRVFGNSSYTIGNSKWFKYDESLLFVVWIISSMVNFGTGYKSLK
LFFRNRNTSKLNFLKTMALELFKQGFLHMVIYVLPIIILSLVFLRDVSTKQIIDISHGSRSFTLSLNESF
PTWTRMQDIYFGLLIALESFTFFFQATVLFIQWFKSTVQNVKDEVYTKGRALENLPDES
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 39 134
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 8tqm 2024-03-27
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 346
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 362 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'BLAST e-value' . 5.1e-06 32.500
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICF-QGPEQGELLSPCRCDGSVRCTHQPCLIRWISER--------GSWSCELCYFKYQVLAISTKNPLQWQAIS-------LTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAGKSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV
2 1 2
-------------------------------------------------------------------------------------------------------------CRICRGEATEDNPLFHPCKCRGSIKYMHESCLLEWVASKNIDISKPGADVKCDICHYPIQFKTIYAENMPEKIPFSLLLSKSILTFFEKARLALTI-------------------------------------------------------------------------------------------------------------------------------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 8tqm.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 2' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . ILE 175 175 ? A 162.954 168.506 180.881 1 1 A ILE 0.480 1
ATOM 2 C CA . ILE 175 175 ? A 161.944 167.516 180.335 1 1 A ILE 0.480 1
ATOM 3 C C . ILE 175 175 ? A 160.617 168.138 179.975 1 1 A ILE 0.480 1
ATOM 4 O O . ILE 175 175 ? A 160.108 167.878 178.894 1 1 A ILE 0.480 1
ATOM 5 C CB . ILE 175 175 ? A 161.812 166.283 181.229 1 1 A ILE 0.480 1
ATOM 6 C CG1 . ILE 175 175 ? A 163.180 165.567 181.354 1 1 A ILE 0.480 1
ATOM 7 C CG2 . ILE 175 175 ? A 160.749 165.296 180.670 1 1 A ILE 0.480 1
ATOM 8 C CD1 . ILE 175 175 ? A 163.199 164.529 182.478 1 1 A ILE 0.480 1
ATOM 9 N N . SER 176 176 ? A 160.019 169.044 180.775 1 1 A SER 0.510 1
ATOM 10 C CA . SER 176 176 ? A 158.830 169.767 180.324 1 1 A SER 0.510 1
ATOM 11 C C . SER 176 176 ? A 159.016 170.548 179.029 1 1 A SER 0.510 1
ATOM 12 O O . SER 176 176 ? A 158.161 170.509 178.152 1 1 A SER 0.510 1
ATOM 13 C CB . SER 176 176 ? A 158.313 170.701 181.432 1 1 A SER 0.510 1
ATOM 14 O OG . SER 176 176 ? A 158.196 169.951 182.647 1 1 A SER 0.510 1
ATOM 15 N N . LEU 177 177 ? A 160.181 171.203 178.840 1 1 A LEU 0.600 1
ATOM 16 C CA . LEU 177 177 ? A 160.586 171.802 177.572 1 1 A LEU 0.600 1
ATOM 17 C C . LEU 177 177 ? A 160.657 170.804 176.404 1 1 A LEU 0.600 1
ATOM 18 O O . LEU 177 177 ? A 160.106 171.065 175.342 1 1 A LEU 0.600 1
ATOM 19 C CB . LEU 177 177 ? A 161.943 172.535 177.744 1 1 A LEU 0.600 1
ATOM 20 C CG . LEU 177 177 ? A 161.938 173.672 178.794 1 1 A LEU 0.600 1
ATOM 21 C CD1 . LEU 177 177 ? A 163.362 174.212 179.005 1 1 A LEU 0.600 1
ATOM 22 C CD2 . LEU 177 177 ? A 160.998 174.818 178.384 1 1 A LEU 0.600 1
ATOM 23 N N . THR 178 178 ? A 161.248 169.602 176.604 1 1 A THR 0.640 1
ATOM 24 C CA . THR 178 178 ? A 161.358 168.538 175.593 1 1 A THR 0.640 1
ATOM 25 C C . THR 178 178 ? A 160.002 168.003 175.161 1 1 A THR 0.640 1
ATOM 26 O O . THR 178 178 ? A 159.749 167.728 173.987 1 1 A THR 0.640 1
ATOM 27 C CB . THR 178 178 ? A 162.290 167.365 175.951 1 1 A THR 0.640 1
ATOM 28 O OG1 . THR 178 178 ? A 161.861 166.539 177.032 1 1 A THR 0.640 1
ATOM 29 C CG2 . THR 178 178 ? A 163.674 167.867 176.374 1 1 A THR 0.640 1
ATOM 30 N N . VAL 179 179 ? A 159.061 167.870 176.120 1 1 A VAL 0.670 1
ATOM 31 C CA . VAL 179 179 ? A 157.650 167.609 175.851 1 1 A VAL 0.670 1
ATOM 32 C C . VAL 179 179 ? A 157.000 168.726 175.039 1 1 A VAL 0.670 1
ATOM 33 O O . VAL 179 179 ? A 156.313 168.449 174.059 1 1 A VAL 0.670 1
ATOM 34 C CB . VAL 179 179 ? A 156.847 167.338 177.127 1 1 A VAL 0.670 1
ATOM 35 C CG1 . VAL 179 179 ? A 155.340 167.145 176.836 1 1 A VAL 0.670 1
ATOM 36 C CG2 . VAL 179 179 ? A 157.402 166.062 177.788 1 1 A VAL 0.670 1
ATOM 37 N N . ILE 180 180 ? A 157.238 170.016 175.373 1 1 A ILE 0.670 1
ATOM 38 C CA . ILE 180 180 ? A 156.756 171.164 174.598 1 1 A ILE 0.670 1
ATOM 39 C C . ILE 180 180 ? A 157.277 171.126 173.165 1 1 A ILE 0.670 1
ATOM 40 O O . ILE 180 180 ? A 156.483 171.228 172.226 1 1 A ILE 0.670 1
ATOM 41 C CB . ILE 180 180 ? A 157.089 172.507 175.272 1 1 A ILE 0.670 1
ATOM 42 C CG1 . ILE 180 180 ? A 156.309 172.655 176.602 1 1 A ILE 0.670 1
ATOM 43 C CG2 . ILE 180 180 ? A 156.811 173.716 174.340 1 1 A ILE 0.670 1
ATOM 44 C CD1 . ILE 180 180 ? A 156.852 173.769 177.509 1 1 A ILE 0.670 1
ATOM 45 N N . GLU 181 181 ? A 158.587 170.879 172.946 1 1 A GLU 0.680 1
ATOM 46 C CA . GLU 181 181 ? A 159.203 170.721 171.633 1 1 A GLU 0.680 1
ATOM 47 C C . GLU 181 181 ? A 158.558 169.589 170.835 1 1 A GLU 0.680 1
ATOM 48 O O . GLU 181 181 ? A 158.178 169.757 169.679 1 1 A GLU 0.680 1
ATOM 49 C CB . GLU 181 181 ? A 160.722 170.421 171.773 1 1 A GLU 0.680 1
ATOM 50 C CG . GLU 181 181 ? A 161.550 171.555 172.435 1 1 A GLU 0.680 1
ATOM 51 C CD . GLU 181 181 ? A 162.839 171.082 173.120 1 1 A GLU 0.680 1
ATOM 52 O OE1 . GLU 181 181 ? A 163.221 169.892 172.969 1 1 A GLU 0.680 1
ATOM 53 O OE2 . GLU 181 181 ? A 163.430 171.915 173.857 1 1 A GLU 0.680 1
ATOM 54 N N . LYS 182 182 ? A 158.331 168.419 171.473 1 1 A LYS 0.680 1
ATOM 55 C CA . LYS 182 182 ? A 157.606 167.300 170.883 1 1 A LYS 0.680 1
ATOM 56 C C . LYS 182 182 ? A 156.175 167.632 170.465 1 1 A LYS 0.680 1
ATOM 57 O O . LYS 182 182 ? A 155.738 167.245 169.378 1 1 A LYS 0.680 1
ATOM 58 C CB . LYS 182 182 ? A 157.518 166.116 171.886 1 1 A LYS 0.680 1
ATOM 59 C CG . LYS 182 182 ? A 156.676 164.926 171.384 1 1 A LYS 0.680 1
ATOM 60 C CD . LYS 182 182 ? A 156.492 163.821 172.431 1 1 A LYS 0.680 1
ATOM 61 C CE . LYS 182 182 ? A 155.595 162.690 171.922 1 1 A LYS 0.680 1
ATOM 62 N NZ . LYS 182 182 ? A 155.454 161.656 172.968 1 1 A LYS 0.680 1
ATOM 63 N N . VAL 183 183 ? A 155.406 168.340 171.316 1 1 A VAL 0.680 1
ATOM 64 C CA . VAL 183 183 ? A 154.056 168.821 171.026 1 1 A VAL 0.680 1
ATOM 65 C C . VAL 183 183 ? A 154.053 169.818 169.879 1 1 A VAL 0.680 1
ATOM 66 O O . VAL 183 183 ? A 153.237 169.724 168.965 1 1 A VAL 0.680 1
ATOM 67 C CB . VAL 183 183 ? A 153.379 169.433 172.256 1 1 A VAL 0.680 1
ATOM 68 C CG1 . VAL 183 183 ? A 152.020 170.089 171.914 1 1 A VAL 0.680 1
ATOM 69 C CG2 . VAL 183 183 ? A 153.137 168.326 173.300 1 1 A VAL 0.680 1
ATOM 70 N N . GLN 184 184 ? A 155.003 170.778 169.871 1 1 A GLN 0.660 1
ATOM 71 C CA . GLN 184 184 ? A 155.168 171.725 168.783 1 1 A GLN 0.660 1
ATOM 72 C C . GLN 184 184 ? A 155.497 171.053 167.464 1 1 A GLN 0.660 1
ATOM 73 O O . GLN 184 184 ? A 154.850 171.322 166.459 1 1 A GLN 0.660 1
ATOM 74 C CB . GLN 184 184 ? A 156.271 172.757 169.113 1 1 A GLN 0.660 1
ATOM 75 C CG . GLN 184 184 ? A 155.861 173.738 170.232 1 1 A GLN 0.660 1
ATOM 76 C CD . GLN 184 184 ? A 157.025 174.657 170.599 1 1 A GLN 0.660 1
ATOM 77 O OE1 . GLN 184 184 ? A 158.195 174.362 170.379 1 1 A GLN 0.660 1
ATOM 78 N NE2 . GLN 184 184 ? A 156.696 175.833 171.188 1 1 A GLN 0.660 1
ATOM 79 N N . ILE 185 185 ? A 156.457 170.105 167.445 1 1 A ILE 0.620 1
ATOM 80 C CA . ILE 185 185 ? A 156.785 169.321 166.258 1 1 A ILE 0.620 1
ATOM 81 C C . ILE 185 185 ? A 155.593 168.503 165.775 1 1 A ILE 0.620 1
ATOM 82 O O . ILE 185 185 ? A 155.255 168.540 164.598 1 1 A ILE 0.620 1
ATOM 83 C CB . ILE 185 185 ? A 158.005 168.423 166.492 1 1 A ILE 0.620 1
ATOM 84 C CG1 . ILE 185 185 ? A 159.265 169.297 166.710 1 1 A ILE 0.620 1
ATOM 85 C CG2 . ILE 185 185 ? A 158.229 167.434 165.318 1 1 A ILE 0.620 1
ATOM 86 C CD1 . ILE 185 185 ? A 160.457 168.518 167.281 1 1 A ILE 0.620 1
ATOM 87 N N . ALA 186 186 ? A 154.885 167.799 166.683 1 1 A ALA 0.640 1
ATOM 88 C CA . ALA 186 186 ? A 153.711 167.007 166.357 1 1 A ALA 0.640 1
ATOM 89 C C . ALA 186 186 ? A 152.529 167.794 165.789 1 1 A ALA 0.640 1
ATOM 90 O O . ALA 186 186 ? A 151.821 167.296 164.922 1 1 A ALA 0.640 1
ATOM 91 C CB . ALA 186 186 ? A 153.235 166.234 167.606 1 1 A ALA 0.640 1
ATOM 92 N N . ALA 187 187 ? A 152.274 169.014 166.301 1 1 A ALA 0.610 1
ATOM 93 C CA . ALA 187 187 ? A 151.296 169.961 165.781 1 1 A ALA 0.610 1
ATOM 94 C C . ALA 187 187 ? A 151.654 170.638 164.450 1 1 A ALA 0.610 1
ATOM 95 O O . ALA 187 187 ? A 150.758 171.025 163.693 1 1 A ALA 0.610 1
ATOM 96 C CB . ALA 187 187 ? A 151.071 171.080 166.822 1 1 A ALA 0.610 1
ATOM 97 N N . ILE 188 188 ? A 152.951 170.891 164.185 1 1 A ILE 0.480 1
ATOM 98 C CA . ILE 188 188 ? A 153.491 171.390 162.912 1 1 A ILE 0.480 1
ATOM 99 C C . ILE 188 188 ? A 153.437 170.366 161.770 1 1 A ILE 0.480 1
ATOM 100 O O . ILE 188 188 ? A 153.201 170.740 160.616 1 1 A ILE 0.480 1
ATOM 101 C CB . ILE 188 188 ? A 154.926 171.932 163.070 1 1 A ILE 0.480 1
ATOM 102 C CG1 . ILE 188 188 ? A 154.947 173.202 163.959 1 1 A ILE 0.480 1
ATOM 103 C CG2 . ILE 188 188 ? A 155.582 172.251 161.701 1 1 A ILE 0.480 1
ATOM 104 C CD1 . ILE 188 188 ? A 156.358 173.592 164.427 1 1 A ILE 0.480 1
ATOM 105 N N . VAL 189 189 ? A 153.714 169.082 162.064 1 1 A VAL 0.450 1
ATOM 106 C CA . VAL 189 189 ? A 153.640 167.956 161.135 1 1 A VAL 0.450 1
ATOM 107 C C . VAL 189 189 ? A 152.164 167.568 160.794 1 1 A VAL 0.450 1
ATOM 108 O O . VAL 189 189 ? A 151.248 167.837 161.607 1 1 A VAL 0.450 1
ATOM 109 C CB . VAL 189 189 ? A 154.458 166.764 161.683 1 1 A VAL 0.450 1
ATOM 110 C CG1 . VAL 189 189 ? A 154.345 165.498 160.811 1 1 A VAL 0.450 1
ATOM 111 C CG2 . VAL 189 189 ? A 155.954 167.144 161.763 1 1 A VAL 0.450 1
ATOM 112 O OXT . VAL 189 189 ? A 151.954 167.023 159.677 1 1 A VAL 0.450 1
#
#
loop_
_atom_type.symbol
C
N
O
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.605
2 1 3 0.017
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 175 ILE 1 0.480
2 1 A 176 SER 1 0.510
3 1 A 177 LEU 1 0.600
4 1 A 178 THR 1 0.640
5 1 A 179 VAL 1 0.670
6 1 A 180 ILE 1 0.670
7 1 A 181 GLU 1 0.680
8 1 A 182 LYS 1 0.680
9 1 A 183 VAL 1 0.680
10 1 A 184 GLN 1 0.660
11 1 A 185 ILE 1 0.620
12 1 A 186 ALA 1 0.640
13 1 A 187 ALA 1 0.610
14 1 A 188 ILE 1 0.480
15 1 A 189 VAL 1 0.450
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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