data_SMR-0c815d5bd81288f736fdf991691040aa_7
_entry.id SMR-0c815d5bd81288f736fdf991691040aa_7
_struct.entry_id SMR-0c815d5bd81288f736fdf991691040aa_7
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - Q9BY43/ CHM4A_HUMAN, Charged multivesicular body protein 4a

Estimated model accuracy of this model is 0.069, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries Q9BY43'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 34604.069 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP CHM4A_HUMAN Q9BY43 1
;MSRRRPEDGLGKAGPCVMRHHPPRSKAEVWRTLRGGGGRGELAMSGLGRLFGKGKKEKGPTPEEAIQKLK
ETEKILIKKQEFLEQKIQQELQTAKKYGTKNKRAALQALRRKKRFEQQLAQTDGTLSTLEFQREAIENAT
TNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMGFGDDVDEDELLEELEE
LEQEELAQELLNVGDKEEEPSVKLPSVPSTHLPAGPAPKVDEDEEALKQLAEWVS
;
'Charged multivesicular body protein 4a'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 265 1 265
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . CHM4A_HUMAN Q9BY43 Q9BY43-2 1 265 9606 'Homo sapiens (Human)' 2006-02-07
9F8805839882B9D1
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no B
;MSRRRPEDGLGKAGPCVMRHHPPRSKAEVWRTLRGGGGRGELAMSGLGRLFGKGKKEKGPTPEEAIQKLK
ETEKILIKKQEFLEQKIQQELQTAKKYGTKNKRAALQALRRKKRFEQQLAQTDGTLSTLEFQREAIENAT
TNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMGFGDDVDEDELLEELEE
LEQEELAQELLNVGDKEEEPSVKLPSVPSTHLPAGPAPKVDEDEEALKQLAEWVS
;

;MSRRRPEDGLGKAGPCVMRHHPPRSKAEVWRTLRGGGGRGELAMSGLGRLFGKGKKEKGPTPEEAIQKLK
ETEKILIKKQEFLEQKIQQELQTAKKYGTKNKRAALQALRRKKRFEQQLAQTDGTLSTLEFQREAIENAT
TNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMGFGDDVDEDELLEELEE
LEQEELAQELLNVGDKEEEPSVKLPSVPSTHLPAGPAPKVDEDEEALKQLAEWVS
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 SER .
1 3 ARG .
1 4 ARG .
1 5 ARG .
1 6 PRO .
1 7 GLU .
1 8 ASP .
1 9 GLY .
1 10 LEU .
1 11 GLY .
1 12 LYS .
1 13 ALA .
1 14 GLY .
1 15 PRO .
1 16 CYS .
1 17 VAL .
1 18 MET .
1 19 ARG .
1 20 HIS .
1 21 HIS .
1 22 PRO .
1 23 PRO .
1 24 ARG .
1 25 SER .
1 26 LYS .
1 27 ALA .
1 28 GLU .
1 29 VAL .
1 30 TRP .
1 31 ARG .
1 32 THR .
1 33 LEU .
1 34 ARG .
1 35 GLY .
1 36 GLY .
1 37 GLY .
1 38 GLY .
1 39 ARG .
1 40 GLY .
1 41 GLU .
1 42 LEU .
1 43 ALA .
1 44 MET .
1 45 SER .
1 46 GLY .
1 47 LEU .
1 48 GLY .
1 49 ARG .
1 50 LEU .
1 51 PHE .
1 52 GLY .
1 53 LYS .
1 54 GLY .
1 55 LYS .
1 56 LYS .
1 57 GLU .
1 58 LYS .
1 59 GLY .
1 60 PRO .
1 61 THR .
1 62 PRO .
1 63 GLU .
1 64 GLU .
1 65 ALA .
1 66 ILE .
1 67 GLN .
1 68 LYS .
1 69 LEU .
1 70 LYS .
1 71 GLU .
1 72 THR .
1 73 GLU .
1 74 LYS .
1 75 ILE .
1 76 LEU .
1 77 ILE .
1 78 LYS .
1 79 LYS .
1 80 GLN .
1 81 GLU .
1 82 PHE .
1 83 LEU .
1 84 GLU .
1 85 GLN .
1 86 LYS .
1 87 ILE .
1 88 GLN .
1 89 GLN .
1 90 GLU .
1 91 LEU .
1 92 GLN .
1 93 THR .
1 94 ALA .
1 95 LYS .
1 96 LYS .
1 97 TYR .
1 98 GLY .
1 99 THR .
1 100 LYS .
1 101 ASN .
1 102 LYS .
1 103 ARG .
1 104 ALA .
1 105 ALA .
1 106 LEU .
1 107 GLN .
1 108 ALA .
1 109 LEU .
1 110 ARG .
1 111 ARG .
1 112 LYS .
1 113 LYS .
1 114 ARG .
1 115 PHE .
1 116 GLU .
1 117 GLN .
1 118 GLN .
1 119 LEU .
1 120 ALA .
1 121 GLN .
1 122 THR .
1 123 ASP .
1 124 GLY .
1 125 THR .
1 126 LEU .
1 127 SER .
1 128 THR .
1 129 LEU .
1 130 GLU .
1 131 PHE .
1 132 GLN .
1 133 ARG .
1 134 GLU .
1 135 ALA .
1 136 ILE .
1 137 GLU .
1 138 ASN .
1 139 ALA .
1 140 THR .
1 141 THR .
1 142 ASN .
1 143 ALA .
1 144 GLU .
1 145 VAL .
1 146 LEU .
1 147 ARG .
1 148 THR .
1 149 MET .
1 150 GLU .
1 151 LEU .
1 152 ALA .
1 153 ALA .
1 154 GLN .
1 155 SER .
1 156 MET .
1 157 LYS .
1 158 LYS .
1 159 ALA .
1 160 TYR .
1 161 GLN .
1 162 ASP .
1 163 MET .
1 164 ASP .
1 165 ILE .
1 166 ASP .
1 167 LYS .
1 168 VAL .
1 169 ASP .
1 170 GLU .
1 171 LEU .
1 172 MET .
1 173 THR .
1 174 ASP .
1 175 ILE .
1 176 THR .
1 177 GLU .
1 178 GLN .
1 179 GLN .
1 180 GLU .
1 181 VAL .
1 182 ALA .
1 183 GLN .
1 184 GLN .
1 185 ILE .
1 186 SER .
1 187 ASP .
1 188 ALA .
1 189 ILE .
1 190 SER .
1 191 ARG .
1 192 PRO .
1 193 MET .
1 194 GLY .
1 195 PHE .
1 196 GLY .
1 197 ASP .
1 198 ASP .
1 199 VAL .
1 200 ASP .
1 201 GLU .
1 202 ASP .
1 203 GLU .
1 204 LEU .
1 205 LEU .
1 206 GLU .
1 207 GLU .
1 208 LEU .
1 209 GLU .
1 210 GLU .
1 211 LEU .
1 212 GLU .
1 213 GLN .
1 214 GLU .
1 215 GLU .
1 216 LEU .
1 217 ALA .
1 218 GLN .
1 219 GLU .
1 220 LEU .
1 221 LEU .
1 222 ASN .
1 223 VAL .
1 224 GLY .
1 225 ASP .
1 226 LYS .
1 227 GLU .
1 228 GLU .
1 229 GLU .
1 230 PRO .
1 231 SER .
1 232 VAL .
1 233 LYS .
1 234 LEU .
1 235 PRO .
1 236 SER .
1 237 VAL .
1 238 PRO .
1 239 SER .
1 240 THR .
1 241 HIS .
1 242 LEU .
1 243 PRO .
1 244 ALA .
1 245 GLY .
1 246 PRO .
1 247 ALA .
1 248 PRO .
1 249 LYS .
1 250 VAL .
1 251 ASP .
1 252 GLU .
1 253 ASP .
1 254 GLU .
1 255 GLU .
1 256 ALA .
1 257 LEU .
1 258 LYS .
1 259 GLN .
1 260 LEU .
1 261 ALA .
1 262 GLU .
1 263 TRP .
1 264 VAL .
1 265 SER .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? B .
A 1 2 SER 2 ? ? ? B .
A 1 3 ARG 3 ? ? ? B .
A 1 4 ARG 4 ? ? ? B .
A 1 5 ARG 5 ? ? ? B .
A 1 6 PRO 6 ? ? ? B .
A 1 7 GLU 7 ? ? ? B .
A 1 8 ASP 8 ? ? ? B .
A 1 9 GLY 9 ? ? ? B .
A 1 10 LEU 10 ? ? ? B .
A 1 11 GLY 11 ? ? ? B .
A 1 12 LYS 12 ? ? ? B .
A 1 13 ALA 13 ? ? ? B .
A 1 14 GLY 14 ? ? ? B .
A 1 15 PRO 15 ? ? ? B .
A 1 16 CYS 16 ? ? ? B .
A 1 17 VAL 17 ? ? ? B .
A 1 18 MET 18 ? ? ? B .
A 1 19 ARG 19 ? ? ? B .
A 1 20 HIS 20 ? ? ? B .
A 1 21 HIS 21 ? ? ? B .
A 1 22 PRO 22 ? ? ? B .
A 1 23 PRO 23 ? ? ? B .
A 1 24 ARG 24 ? ? ? B .
A 1 25 SER 25 ? ? ? B .
A 1 26 LYS 26 ? ? ? B .
A 1 27 ALA 27 ? ? ? B .
A 1 28 GLU 28 ? ? ? B .
A 1 29 VAL 29 ? ? ? B .
A 1 30 TRP 30 ? ? ? B .
A 1 31 ARG 31 ? ? ? B .
A 1 32 THR 32 ? ? ? B .
A 1 33 LEU 33 ? ? ? B .
A 1 34 ARG 34 ? ? ? B .
A 1 35 GLY 35 ? ? ? B .
A 1 36 GLY 36 ? ? ? B .
A 1 37 GLY 37 ? ? ? B .
A 1 38 GLY 38 ? ? ? B .
A 1 39 ARG 39 ? ? ? B .
A 1 40 GLY 40 ? ? ? B .
A 1 41 GLU 41 ? ? ? B .
A 1 42 LEU 42 ? ? ? B .
A 1 43 ALA 43 ? ? ? B .
A 1 44 MET 44 ? ? ? B .
A 1 45 SER 45 ? ? ? B .
A 1 46 GLY 46 ? ? ? B .
A 1 47 LEU 47 ? ? ? B .
A 1 48 GLY 48 ? ? ? B .
A 1 49 ARG 49 ? ? ? B .
A 1 50 LEU 50 ? ? ? B .
A 1 51 PHE 51 ? ? ? B .
A 1 52 GLY 52 ? ? ? B .
A 1 53 LYS 53 ? ? ? B .
A 1 54 GLY 54 ? ? ? B .
A 1 55 LYS 55 ? ? ? B .
A 1 56 LYS 56 ? ? ? B .
A 1 57 GLU 57 ? ? ? B .
A 1 58 LYS 58 ? ? ? B .
A 1 59 GLY 59 ? ? ? B .
A 1 60 PRO 60 ? ? ? B .
A 1 61 THR 61 ? ? ? B .
A 1 62 PRO 62 ? ? ? B .
A 1 63 GLU 63 ? ? ? B .
A 1 64 GLU 64 ? ? ? B .
A 1 65 ALA 65 ? ? ? B .
A 1 66 ILE 66 ? ? ? B .
A 1 67 GLN 67 ? ? ? B .
A 1 68 LYS 68 ? ? ? B .
A 1 69 LEU 69 ? ? ? B .
A 1 70 LYS 70 ? ? ? B .
A 1 71 GLU 71 ? ? ? B .
A 1 72 THR 72 ? ? ? B .
A 1 73 GLU 73 ? ? ? B .
A 1 74 LYS 74 ? ? ? B .
A 1 75 ILE 75 ? ? ? B .
A 1 76 LEU 76 ? ? ? B .
A 1 77 ILE 77 ? ? ? B .
A 1 78 LYS 78 ? ? ? B .
A 1 79 LYS 79 ? ? ? B .
A 1 80 GLN 80 ? ? ? B .
A 1 81 GLU 81 ? ? ? B .
A 1 82 PHE 82 ? ? ? B .
A 1 83 LEU 83 ? ? ? B .
A 1 84 GLU 84 ? ? ? B .
A 1 85 GLN 85 ? ? ? B .
A 1 86 LYS 86 ? ? ? B .
A 1 87 ILE 87 ? ? ? B .
A 1 88 GLN 88 ? ? ? B .
A 1 89 GLN 89 ? ? ? B .
A 1 90 GLU 90 ? ? ? B .
A 1 91 LEU 91 ? ? ? B .
A 1 92 GLN 92 ? ? ? B .
A 1 93 THR 93 ? ? ? B .
A 1 94 ALA 94 ? ? ? B .
A 1 95 LYS 95 ? ? ? B .
A 1 96 LYS 96 ? ? ? B .
A 1 97 TYR 97 ? ? ? B .
A 1 98 GLY 98 ? ? ? B .
A 1 99 THR 99 ? ? ? B .
A 1 100 LYS 100 ? ? ? B .
A 1 101 ASN 101 ? ? ? B .
A 1 102 LYS 102 ? ? ? B .
A 1 103 ARG 103 ? ? ? B .
A 1 104 ALA 104 ? ? ? B .
A 1 105 ALA 105 ? ? ? B .
A 1 106 LEU 106 ? ? ? B .
A 1 107 GLN 107 ? ? ? B .
A 1 108 ALA 108 ? ? ? B .
A 1 109 LEU 109 ? ? ? B .
A 1 110 ARG 110 ? ? ? B .
A 1 111 ARG 111 ? ? ? B .
A 1 112 LYS 112 ? ? ? B .
A 1 113 LYS 113 ? ? ? B .
A 1 114 ARG 114 ? ? ? B .
A 1 115 PHE 115 ? ? ? B .
A 1 116 GLU 116 ? ? ? B .
A 1 117 GLN 117 ? ? ? B .
A 1 118 GLN 118 ? ? ? B .
A 1 119 LEU 119 ? ? ? B .
A 1 120 ALA 120 ? ? ? B .
A 1 121 GLN 121 ? ? ? B .
A 1 122 THR 122 ? ? ? B .
A 1 123 ASP 123 ? ? ? B .
A 1 124 GLY 124 ? ? ? B .
A 1 125 THR 125 ? ? ? B .
A 1 126 LEU 126 ? ? ? B .
A 1 127 SER 127 ? ? ? B .
A 1 128 THR 128 ? ? ? B .
A 1 129 LEU 129 ? ? ? B .
A 1 130 GLU 130 ? ? ? B .
A 1 131 PHE 131 ? ? ? B .
A 1 132 GLN 132 ? ? ? B .
A 1 133 ARG 133 ? ? ? B .
A 1 134 GLU 134 ? ? ? B .
A 1 135 ALA 135 ? ? ? B .
A 1 136 ILE 136 ? ? ? B .
A 1 137 GLU 137 ? ? ? B .
A 1 138 ASN 138 ? ? ? B .
A 1 139 ALA 139 ? ? ? B .
A 1 140 THR 140 ? ? ? B .
A 1 141 THR 141 ? ? ? B .
A 1 142 ASN 142 ? ? ? B .
A 1 143 ALA 143 ? ? ? B .
A 1 144 GLU 144 ? ? ? B .
A 1 145 VAL 145 ? ? ? B .
A 1 146 LEU 146 ? ? ? B .
A 1 147 ARG 147 ? ? ? B .
A 1 148 THR 148 ? ? ? B .
A 1 149 MET 149 ? ? ? B .
A 1 150 GLU 150 ? ? ? B .
A 1 151 LEU 151 ? ? ? B .
A 1 152 ALA 152 ? ? ? B .
A 1 153 ALA 153 ? ? ? B .
A 1 154 GLN 154 ? ? ? B .
A 1 155 SER 155 ? ? ? B .
A 1 156 MET 156 ? ? ? B .
A 1 157 LYS 157 ? ? ? B .
A 1 158 LYS 158 ? ? ? B .
A 1 159 ALA 159 ? ? ? B .
A 1 160 TYR 160 ? ? ? B .
A 1 161 GLN 161 ? ? ? B .
A 1 162 ASP 162 ? ? ? B .
A 1 163 MET 163 ? ? ? B .
A 1 164 ASP 164 ? ? ? B .
A 1 165 ILE 165 ? ? ? B .
A 1 166 ASP 166 ? ? ? B .
A 1 167 LYS 167 ? ? ? B .
A 1 168 VAL 168 ? ? ? B .
A 1 169 ASP 169 ? ? ? B .
A 1 170 GLU 170 ? ? ? B .
A 1 171 LEU 171 ? ? ? B .
A 1 172 MET 172 ? ? ? B .
A 1 173 THR 173 ? ? ? B .
A 1 174 ASP 174 ? ? ? B .
A 1 175 ILE 175 ? ? ? B .
A 1 176 THR 176 ? ? ? B .
A 1 177 GLU 177 ? ? ? B .
A 1 178 GLN 178 ? ? ? B .
A 1 179 GLN 179 ? ? ? B .
A 1 180 GLU 180 ? ? ? B .
A 1 181 VAL 181 ? ? ? B .
A 1 182 ALA 182 ? ? ? B .
A 1 183 GLN 183 ? ? ? B .
A 1 184 GLN 184 ? ? ? B .
A 1 185 ILE 185 ? ? ? B .
A 1 186 SER 186 ? ? ? B .
A 1 187 ASP 187 ? ? ? B .
A 1 188 ALA 188 ? ? ? B .
A 1 189 ILE 189 ? ? ? B .
A 1 190 SER 190 ? ? ? B .
A 1 191 ARG 191 ? ? ? B .
A 1 192 PRO 192 ? ? ? B .
A 1 193 MET 193 ? ? ? B .
A 1 194 GLY 194 ? ? ? B .
A 1 195 PHE 195 ? ? ? B .
A 1 196 GLY 196 ? ? ? B .
A 1 197 ASP 197 ? ? ? B .
A 1 198 ASP 198 ? ? ? B .
A 1 199 VAL 199 ? ? ? B .
A 1 200 ASP 200 ? ? ? B .
A 1 201 GLU 201 ? ? ? B .
A 1 202 ASP 202 ? ? ? B .
A 1 203 GLU 203 ? ? ? B .
A 1 204 LEU 204 ? ? ? B .
A 1 205 LEU 205 ? ? ? B .
A 1 206 GLU 206 ? ? ? B .
A 1 207 GLU 207 ? ? ? B .
A 1 208 LEU 208 ? ? ? B .
A 1 209 GLU 209 ? ? ? B .
A 1 210 GLU 210 ? ? ? B .
A 1 211 LEU 211 ? ? ? B .
A 1 212 GLU 212 ? ? ? B .
A 1 213 GLN 213 ? ? ? B .
A 1 214 GLU 214 ? ? ? B .
A 1 215 GLU 215 ? ? ? B .
A 1 216 LEU 216 ? ? ? B .
A 1 217 ALA 217 ? ? ? B .
A 1 218 GLN 218 ? ? ? B .
A 1 219 GLU 219 ? ? ? B .
A 1 220 LEU 220 ? ? ? B .
A 1 221 LEU 221 ? ? ? B .
A 1 222 ASN 222 ? ? ? B .
A 1 223 VAL 223 ? ? ? B .
A 1 224 GLY 224 ? ? ? B .
A 1 225 ASP 225 ? ? ? B .
A 1 226 LYS 226 ? ? ? B .
A 1 227 GLU 227 ? ? ? B .
A 1 228 GLU 228 ? ? ? B .
A 1 229 GLU 229 ? ? ? B .
A 1 230 PRO 230 ? ? ? B .
A 1 231 SER 231 ? ? ? B .
A 1 232 VAL 232 ? ? ? B .
A 1 233 LYS 233 ? ? ? B .
A 1 234 LEU 234 ? ? ? B .
A 1 235 PRO 235 ? ? ? B .
A 1 236 SER 236 ? ? ? B .
A 1 237 VAL 237 ? ? ? B .
A 1 238 PRO 238 ? ? ? B .
A 1 239 SER 239 ? ? ? B .
A 1 240 THR 240 ? ? ? B .
A 1 241 HIS 241 ? ? ? B .
A 1 242 LEU 242 ? ? ? B .
A 1 243 PRO 243 ? ? ? B .
A 1 244 ALA 244 ? ? ? B .
A 1 245 GLY 245 ? ? ? B .
A 1 246 PRO 246 ? ? ? B .
A 1 247 ALA 247 ? ? ? B .
A 1 248 PRO 248 ? ? ? B .
A 1 249 LYS 249 ? ? ? B .
A 1 250 VAL 250 250 VAL VAL B .
A 1 251 ASP 251 251 ASP ASP B .
A 1 252 GLU 252 252 GLU GLU B .
A 1 253 ASP 253 253 ASP ASP B .
A 1 254 GLU 254 254 GLU GLU B .
A 1 255 GLU 255 255 GLU GLU B .
A 1 256 ALA 256 256 ALA ALA B .
A 1 257 LEU 257 257 LEU LEU B .
A 1 258 LYS 258 258 LYS LYS B .
A 1 259 GLN 259 259 GLN GLN B .
A 1 260 LEU 260 260 LEU LEU B .
A 1 261 ALA 261 261 ALA ALA B .
A 1 262 GLU 262 262 GLU GLU B .
A 1 263 TRP 263 263 TRP TRP B .
A 1 264 VAL 264 264 VAL VAL B .
A 1 265 SER 265 265 SER SER B .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Charged multivesicular body protein 4b {PDB ID=3um3, label_asym_id=B, auth_asym_id=B, SMTL ID=3um3.1.B}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 3um3, label_asym_id=B'
'target-template alignment' .
4 'model 7' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-07
6 PDB https://www.wwpdb.org . 2024-11-01
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A B 2 1 B
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;DNMDIDKVDELMQDIADQQELAEEISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEISGPETVP
LPNVPSIALPSKPAKKKEEEDDDMKELENWAGSM
;

;DNMDIDKVDELMQDIADQQELAEEISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEISGPETVP
LPNVPSIALPSKPAKKKEEEDDDMKELENWAGSM
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 2 102
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 3um3 2023-09-13
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 265
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 265 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 7.7e-18 57.426
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MSRRRPEDGLGKAGPCVMRHHPPRSKAEVWRTLRGGGGRGELAMSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKRAALQALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMGFGDDVDEDELLEELEELEQEELAQELLNVGDKEEEPSVKLPSVPSTHLPAGPAPKVDEDEEALKQLAEWVS
2 1 2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------NMDIDKVDELMQDIADQQELAEEISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEISGPE---TVPLPNVPSIALPSKPAKKKEEEDDDMKELENWAG
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 3um3.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 7' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . VAL 250 250 ? A -35.488 -71.008 -5.007 1 1 B VAL 0.590 1
ATOM 2 C CA . VAL 250 250 ? A -34.290 -70.557 -5.795 1 1 B VAL 0.590 1
ATOM 3 C C . VAL 250 250 ? A -33.088 -70.911 -4.966 1 1 B VAL 0.590 1
ATOM 4 O O . VAL 250 250 ? A -32.666 -72.057 -5.014 1 1 B VAL 0.590 1
ATOM 5 C CB . VAL 250 250 ? A -34.363 -69.078 -6.212 1 1 B VAL 0.590 1
ATOM 6 C CG1 . VAL 250 250 ? A -33.091 -68.597 -6.966 1 1 B VAL 0.590 1
ATOM 7 C CG2 . VAL 250 250 ? A -35.570 -68.888 -7.156 1 1 B VAL 0.590 1
ATOM 8 N N . ASP 251 251 ? A -32.578 -69.970 -4.144 1 1 B ASP 0.600 1
ATOM 9 C CA . ASP 251 251 ? A -31.942 -70.238 -2.866 1 1 B ASP 0.600 1
ATOM 10 C C . ASP 251 251 ? A -30.522 -70.798 -2.916 1 1 B ASP 0.600 1
ATOM 11 O O . ASP 251 251 ? A -29.814 -70.810 -1.914 1 1 B ASP 0.600 1
ATOM 12 C CB . ASP 251 251 ? A -32.893 -71.069 -1.983 1 1 B ASP 0.600 1
ATOM 13 C CG . ASP 251 251 ? A -34.213 -70.339 -2.018 1 1 B ASP 0.600 1
ATOM 14 O OD1 . ASP 251 251 ? A -34.271 -69.126 -1.727 1 1 B ASP 0.600 1
ATOM 15 O OD2 . ASP 251 251 ? A -35.194 -70.956 -2.514 1 1 B ASP 0.600 1
ATOM 16 N N . GLU 252 252 ? A -30.039 -71.205 -4.112 1 1 B GLU 0.640 1
ATOM 17 C CA . GLU 252 252 ? A -28.762 -71.871 -4.314 1 1 B GLU 0.640 1
ATOM 18 C C . GLU 252 252 ? A -27.575 -71.031 -3.890 1 1 B GLU 0.640 1
ATOM 19 O O . GLU 252 252 ? A -26.627 -71.531 -3.287 1 1 B GLU 0.640 1
ATOM 20 C CB . GLU 252 252 ? A -28.548 -72.267 -5.793 1 1 B GLU 0.640 1
ATOM 21 C CG . GLU 252 252 ? A -27.252 -73.099 -6.020 1 1 B GLU 0.640 1
ATOM 22 C CD . GLU 252 252 ? A -26.846 -73.228 -7.486 1 1 B GLU 0.640 1
ATOM 23 O OE1 . GLU 252 252 ? A -27.446 -72.532 -8.344 1 1 B GLU 0.640 1
ATOM 24 O OE2 . GLU 252 252 ? A -25.910 -74.026 -7.755 1 1 B GLU 0.640 1
ATOM 25 N N . ASP 253 253 ? A -27.629 -69.701 -4.153 1 1 B ASP 0.660 1
ATOM 26 C CA . ASP 253 253 ? A -26.566 -68.761 -3.860 1 1 B ASP 0.660 1
ATOM 27 C C . ASP 253 253 ? A -26.072 -68.883 -2.420 1 1 B ASP 0.660 1
ATOM 28 O O . ASP 253 253 ? A -24.874 -68.970 -2.171 1 1 B ASP 0.660 1
ATOM 29 C CB . ASP 253 253 ? A -27.048 -67.299 -4.106 1 1 B ASP 0.660 1
ATOM 30 C CG . ASP 253 253 ? A -27.255 -66.990 -5.581 1 1 B ASP 0.660 1
ATOM 31 O OD1 . ASP 253 253 ? A -26.771 -67.770 -6.431 1 1 B ASP 0.660 1
ATOM 32 O OD2 . ASP 253 253 ? A -27.906 -65.950 -5.854 1 1 B ASP 0.660 1
ATOM 33 N N . GLU 254 254 ? A -27.004 -68.992 -1.444 1 1 B GLU 0.690 1
ATOM 34 C CA . GLU 254 254 ? A -26.694 -69.146 -0.035 1 1 B GLU 0.690 1
ATOM 35 C C . GLU 254 254 ? A -25.896 -70.398 0.303 1 1 B GLU 0.690 1
ATOM 36 O O . GLU 254 254 ? A -24.926 -70.356 1.061 1 1 B GLU 0.690 1
ATOM 37 C CB . GLU 254 254 ? A -27.979 -69.172 0.816 1 1 B GLU 0.690 1
ATOM 38 C CG . GLU 254 254 ? A -27.679 -69.254 2.336 1 1 B GLU 0.690 1
ATOM 39 C CD . GLU 254 254 ? A -28.929 -69.265 3.205 1 1 B GLU 0.690 1
ATOM 40 O OE1 . GLU 254 254 ? A -30.052 -69.155 2.656 1 1 B GLU 0.690 1
ATOM 41 O OE2 . GLU 254 254 ? A -28.747 -69.393 4.444 1 1 B GLU 0.690 1
ATOM 42 N N . GLU 255 255 ? A -26.258 -71.553 -0.287 1 1 B GLU 0.710 1
ATOM 43 C CA . GLU 255 255 ? A -25.578 -72.818 -0.094 1 1 B GLU 0.710 1
ATOM 44 C C . GLU 255 255 ? A -24.117 -72.772 -0.531 1 1 B GLU 0.710 1
ATOM 45 O O . GLU 255 255 ? A -23.212 -73.197 0.190 1 1 B GLU 0.710 1
ATOM 46 C CB . GLU 255 255 ? A -26.301 -73.916 -0.906 1 1 B GLU 0.710 1
ATOM 47 C CG . GLU 255 255 ? A -25.672 -75.324 -0.761 1 1 B GLU 0.710 1
ATOM 48 C CD . GLU 255 255 ? A -26.419 -76.402 -1.541 1 1 B GLU 0.710 1
ATOM 49 O OE1 . GLU 255 255 ? A -25.957 -77.569 -1.451 1 1 B GLU 0.710 1
ATOM 50 O OE2 . GLU 255 255 ? A -27.445 -76.088 -2.193 1 1 B GLU 0.710 1
ATOM 51 N N . ALA 256 256 ? A -23.859 -72.169 -1.713 1 1 B ALA 0.800 1
ATOM 52 C CA . ALA 256 256 ? A -22.537 -71.953 -2.264 1 1 B ALA 0.800 1
ATOM 53 C C . ALA 256 256 ? A -21.640 -71.064 -1.409 1 1 B ALA 0.800 1
ATOM 54 O O . ALA 256 256 ? A -20.449 -71.338 -1.282 1 1 B ALA 0.800 1
ATOM 55 C CB . ALA 256 256 ? A -22.623 -71.326 -3.668 1 1 B ALA 0.800 1
ATOM 56 N N . LEU 257 257 ? A -22.187 -69.995 -0.776 1 1 B LEU 0.770 1
ATOM 57 C CA . LEU 257 257 ? A -21.465 -69.029 0.057 1 1 B LEU 0.770 1
ATOM 58 C C . LEU 257 257 ? A -20.662 -69.669 1.180 1 1 B LEU 0.770 1
ATOM 59 O O . LEU 257 257 ? A -19.556 -69.244 1.510 1 1 B LEU 0.770 1
ATOM 60 C CB . LEU 257 257 ? A -22.425 -68.000 0.721 1 1 B LEU 0.770 1
ATOM 61 C CG . LEU 257 257 ? A -23.069 -66.979 -0.238 1 1 B LEU 0.770 1
ATOM 62 C CD1 . LEU 257 257 ? A -24.158 -66.167 0.487 1 1 B LEU 0.770 1
ATOM 63 C CD2 . LEU 257 257 ? A -22.042 -66.045 -0.899 1 1 B LEU 0.770 1
ATOM 64 N N . LYS 258 258 ? A -21.204 -70.748 1.772 1 1 B LYS 0.770 1
ATOM 65 C CA . LYS 258 258 ? A -20.519 -71.539 2.768 1 1 B LYS 0.770 1
ATOM 66 C C . LYS 258 258 ? A -19.225 -72.190 2.304 1 1 B LYS 0.770 1
ATOM 67 O O . LYS 258 258 ? A -18.233 -72.162 3.024 1 1 B LYS 0.770 1
ATOM 68 C CB . LYS 258 258 ? A -21.429 -72.682 3.234 1 1 B LYS 0.770 1
ATOM 69 C CG . LYS 258 258 ? A -20.789 -73.537 4.341 1 1 B LYS 0.770 1
ATOM 70 C CD . LYS 258 258 ? A -21.624 -74.765 4.696 1 1 B LYS 0.770 1
ATOM 71 C CE . LYS 258 258 ? A -22.977 -74.389 5.276 1 1 B LYS 0.770 1
ATOM 72 N NZ . LYS 258 258 ? A -23.740 -75.618 5.534 1 1 B LYS 0.770 1
ATOM 73 N N . GLN 259 259 ? A -19.182 -72.776 1.089 1 1 B GLN 0.770 1
ATOM 74 C CA . GLN 259 259 ? A -18.023 -73.479 0.556 1 1 B GLN 0.770 1
ATOM 75 C C . GLN 259 259 ? A -16.804 -72.565 0.449 1 1 B GLN 0.770 1
ATOM 76 O O . GLN 259 259 ? A -15.664 -72.957 0.690 1 1 B GLN 0.770 1
ATOM 77 C CB . GLN 259 259 ? A -18.353 -74.092 -0.838 1 1 B GLN 0.770 1
ATOM 78 C CG . GLN 259 259 ? A -17.213 -74.929 -1.483 1 1 B GLN 0.770 1
ATOM 79 C CD . GLN 259 259 ? A -16.906 -76.178 -0.649 1 1 B GLN 0.770 1
ATOM 80 O OE1 . GLN 259 259 ? A -17.796 -76.949 -0.326 1 1 B GLN 0.770 1
ATOM 81 N NE2 . GLN 259 259 ? A -15.612 -76.398 -0.309 1 1 B GLN 0.770 1
ATOM 82 N N . LEU 260 260 ? A -17.034 -71.282 0.095 1 1 B LEU 0.750 1
ATOM 83 C CA . LEU 260 260 ? A -16.017 -70.250 0.092 1 1 B LEU 0.750 1
ATOM 84 C C . LEU 260 260 ? A -15.585 -69.867 1.480 1 1 B LEU 0.750 1
ATOM 85 O O . LEU 260 260 ? A -14.392 -69.732 1.726 1 1 B LEU 0.750 1
ATOM 86 C CB . LEU 260 260 ? A -16.470 -68.929 -0.561 1 1 B LEU 0.750 1
ATOM 87 C CG . LEU 260 260 ? A -16.760 -69.028 -2.065 1 1 B LEU 0.750 1
ATOM 88 C CD1 . LEU 260 260 ? A -18.150 -69.598 -2.380 1 1 B LEU 0.750 1
ATOM 89 C CD2 . LEU 260 260 ? A -16.623 -67.630 -2.679 1 1 B LEU 0.750 1
ATOM 90 N N . ALA 261 261 ? A -16.549 -69.702 2.417 1 1 B ALA 0.810 1
ATOM 91 C CA . ALA 261 261 ? A -16.297 -69.427 3.815 1 1 B ALA 0.810 1
ATOM 92 C C . ALA 261 261 ? A -15.436 -70.507 4.466 1 1 B ALA 0.810 1
ATOM 93 O O . ALA 261 261 ? A -14.506 -70.205 5.179 1 1 B ALA 0.810 1
ATOM 94 C CB . ALA 261 261 ? A -17.597 -69.238 4.628 1 1 B ALA 0.810 1
ATOM 95 N N . GLU 262 262 ? A -15.692 -71.797 4.191 1 1 B GLU 0.740 1
ATOM 96 C CA . GLU 262 262 ? A -14.845 -72.891 4.629 1 1 B GLU 0.740 1
ATOM 97 C C . GLU 262 262 ? A -13.467 -72.960 3.995 1 1 B GLU 0.740 1
ATOM 98 O O . GLU 262 262 ? A -12.505 -73.355 4.637 1 1 B GLU 0.740 1
ATOM 99 C CB . GLU 262 262 ? A -15.559 -74.224 4.375 1 1 B GLU 0.740 1
ATOM 100 C CG . GLU 262 262 ? A -16.829 -74.359 5.244 1 1 B GLU 0.740 1
ATOM 101 C CD . GLU 262 262 ? A -17.604 -75.640 4.968 1 1 B GLU 0.740 1
ATOM 102 O OE1 . GLU 262 262 ? A -17.206 -76.408 4.058 1 1 B GLU 0.740 1
ATOM 103 O OE2 . GLU 262 262 ? A -18.637 -75.840 5.665 1 1 B GLU 0.740 1
ATOM 104 N N . TRP 263 263 ? A -13.335 -72.617 2.697 1 1 B TRP 0.640 1
ATOM 105 C CA . TRP 263 263 ? A -12.050 -72.527 2.024 1 1 B TRP 0.640 1
ATOM 106 C C . TRP 263 263 ? A -11.152 -71.398 2.541 1 1 B TRP 0.640 1
ATOM 107 O O . TRP 263 263 ? A -9.940 -71.555 2.651 1 1 B TRP 0.640 1
ATOM 108 C CB . TRP 263 263 ? A -12.295 -72.340 0.497 1 1 B TRP 0.640 1
ATOM 109 C CG . TRP 263 263 ? A -11.035 -72.226 -0.356 1 1 B TRP 0.640 1
ATOM 110 C CD1 . TRP 263 263 ? A -10.203 -73.218 -0.792 1 1 B TRP 0.640 1
ATOM 111 C CD2 . TRP 263 263 ? A -10.395 -70.981 -0.722 1 1 B TRP 0.640 1
ATOM 112 N NE1 . TRP 263 263 ? A -9.097 -72.683 -1.428 1 1 B TRP 0.640 1
ATOM 113 C CE2 . TRP 263 263 ? A -9.204 -71.304 -1.382 1 1 B TRP 0.640 1
ATOM 114 C CE3 . TRP 263 263 ? A -10.757 -69.651 -0.493 1 1 B TRP 0.640 1
ATOM 115 C CZ2 . TRP 263 263 ? A -8.342 -70.308 -1.845 1 1 B TRP 0.640 1
ATOM 116 C CZ3 . TRP 263 263 ? A -9.892 -68.645 -0.956 1 1 B TRP 0.640 1
ATOM 117 C CH2 . TRP 263 263 ? A -8.707 -68.966 -1.629 1 1 B TRP 0.640 1
ATOM 118 N N . VAL 264 264 ? A -11.747 -70.211 2.795 1 1 B VAL 0.600 1
ATOM 119 C CA . VAL 264 264 ? A -11.057 -69.029 3.292 1 1 B VAL 0.600 1
ATOM 120 C C . VAL 264 264 ? A -10.721 -69.075 4.785 1 1 B VAL 0.600 1
ATOM 121 O O . VAL 264 264 ? A -9.673 -68.571 5.189 1 1 B VAL 0.600 1
ATOM 122 C CB . VAL 264 264 ? A -11.819 -67.740 2.928 1 1 B VAL 0.600 1
ATOM 123 C CG1 . VAL 264 264 ? A -13.123 -67.571 3.727 1 1 B VAL 0.600 1
ATOM 124 C CG2 . VAL 264 264 ? A -10.920 -66.503 3.108 1 1 B VAL 0.600 1
ATOM 125 N N . SER 265 265 ? A -11.624 -69.636 5.622 1 1 B SER 0.580 1
ATOM 126 C CA . SER 265 265 ? A -11.532 -69.656 7.081 1 1 B SER 0.580 1
ATOM 127 C C . SER 265 265 ? A -10.763 -70.871 7.658 1 1 B SER 0.580 1
ATOM 128 O O . SER 265 265 ? A -10.256 -71.730 6.895 1 1 B SER 0.580 1
ATOM 129 C CB . SER 265 265 ? A -12.925 -69.706 7.781 1 1 B SER 0.580 1
ATOM 130 O OG . SER 265 265 ? A -13.693 -68.511 7.590 1 1 B SER 0.580 1
ATOM 131 O OXT . SER 265 265 ? A -10.697 -70.951 8.919 1 1 B SER 0.580 1
#
#
loop_
_atom_type.symbol
C
N
O
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.695
2 1 3 0.069
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 250 VAL 1 0.590
2 1 A 251 ASP 1 0.600
3 1 A 252 GLU 1 0.640
4 1 A 253 ASP 1 0.660
5 1 A 254 GLU 1 0.690
6 1 A 255 GLU 1 0.710
7 1 A 256 ALA 1 0.800
8 1 A 257 LEU 1 0.770
9 1 A 258 LYS 1 0.770
10 1 A 259 GLN 1 0.770
11 1 A 260 LEU 1 0.750
12 1 A 261 ALA 1 0.810
13 1 A 262 GLU 1 0.740
14 1 A 263 TRP 1 0.640
15 1 A 264 VAL 1 0.600
16 1 A 265 SER 1 0.580
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
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