data_SMR-0dabea2af323523cb5fd8d88a9363e34_2 _entry.id SMR-0dabea2af323523cb5fd8d88a9363e34_2 _struct.entry_id SMR-0dabea2af323523cb5fd8d88a9363e34_2 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q8NEY8/ PPHLN_HUMAN, Periphilin-1 Estimated model accuracy of this model is 0.028, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q8NEY8' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 34469.730 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP PPHLN_HUMAN Q8NEY8 1 ;MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYAR ERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPE RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAG STAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVRV ; Periphilin-1 # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 258 1 258 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . PPHLN_HUMAN Q8NEY8 Q8NEY8-2 1 258 9606 'Homo sapiens (Human)' 2004-04-13 40A8EA59BEE07615 # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no A ;MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYAR ERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPE RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAG STAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVRV ; ;MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYAR ERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPE RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAG STAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVRV ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 ALA . 1 3 TYR . 1 4 ARG . 1 5 ARG . 1 6 ASP . 1 7 GLU . 1 8 MET . 1 9 TRP . 1 10 SER . 1 11 GLU . 1 12 GLY . 1 13 ARG . 1 14 TYR . 1 15 GLU . 1 16 TYR . 1 17 GLU . 1 18 ARG . 1 19 ILE . 1 20 PRO . 1 21 ARG . 1 22 GLU . 1 23 ARG . 1 24 ALA . 1 25 PRO . 1 26 PRO . 1 27 ARG . 1 28 SER . 1 29 HIS . 1 30 PRO . 1 31 SER . 1 32 ASP . 1 33 GLU . 1 34 SER . 1 35 GLY . 1 36 TYR . 1 37 ARG . 1 38 TRP . 1 39 THR . 1 40 ARG . 1 41 ASP . 1 42 ASP . 1 43 HIS . 1 44 SER . 1 45 ALA . 1 46 SER . 1 47 ARG . 1 48 GLN . 1 49 PRO . 1 50 GLU . 1 51 TYR . 1 52 ARG . 1 53 ASP . 1 54 MET . 1 55 ARG . 1 56 ASP . 1 57 GLY . 1 58 PHE . 1 59 ARG . 1 60 ARG . 1 61 LYS . 1 62 SER . 1 63 PHE . 1 64 TYR . 1 65 SER . 1 66 SER . 1 67 HIS . 1 68 TYR . 1 69 ALA . 1 70 ARG . 1 71 GLU . 1 72 ARG . 1 73 SER . 1 74 PRO . 1 75 TYR . 1 76 LYS . 1 77 ARG . 1 78 ASP . 1 79 ASN . 1 80 THR . 1 81 PHE . 1 82 PHE . 1 83 ARG . 1 84 GLU . 1 85 SER . 1 86 PRO . 1 87 VAL . 1 88 GLY . 1 89 ARG . 1 90 LYS . 1 91 ASP . 1 92 SER . 1 93 PRO . 1 94 HIS . 1 95 SER . 1 96 ARG . 1 97 SER . 1 98 GLY . 1 99 SER . 1 100 SER . 1 101 VAL . 1 102 SER . 1 103 SER . 1 104 ARG . 1 105 SER . 1 106 TYR . 1 107 SER . 1 108 PRO . 1 109 GLU . 1 110 ARG . 1 111 SER . 1 112 LYS . 1 113 SER . 1 114 TYR . 1 115 SER . 1 116 PHE . 1 117 HIS . 1 118 GLN . 1 119 SER . 1 120 GLN . 1 121 HIS . 1 122 ARG . 1 123 LYS . 1 124 SER . 1 125 VAL . 1 126 ARG . 1 127 PRO . 1 128 GLY . 1 129 ALA . 1 130 SER . 1 131 TYR . 1 132 LYS . 1 133 ARG . 1 134 GLN . 1 135 ASN . 1 136 GLU . 1 137 GLY . 1 138 ASN . 1 139 PRO . 1 140 GLU . 1 141 ARG . 1 142 ASP . 1 143 LYS . 1 144 GLU . 1 145 ARG . 1 146 PRO . 1 147 VAL . 1 148 GLN . 1 149 SER . 1 150 LEU . 1 151 LYS . 1 152 THR . 1 153 SER . 1 154 ARG . 1 155 ASP . 1 156 THR . 1 157 SER . 1 158 PRO . 1 159 SER . 1 160 SER . 1 161 GLY . 1 162 SER . 1 163 ALA . 1 164 VAL . 1 165 SER . 1 166 SER . 1 167 SER . 1 168 LYS . 1 169 VAL . 1 170 LEU . 1 171 ASP . 1 172 LYS . 1 173 PRO . 1 174 SER . 1 175 ARG . 1 176 LEU . 1 177 THR . 1 178 GLU . 1 179 LYS . 1 180 GLU . 1 181 LEU . 1 182 ALA . 1 183 GLU . 1 184 ALA . 1 185 ALA . 1 186 SER . 1 187 LYS . 1 188 TRP . 1 189 ALA . 1 190 ALA . 1 191 GLU . 1 192 LYS . 1 193 LEU . 1 194 GLU . 1 195 LYS . 1 196 SER . 1 197 ASP . 1 198 GLU . 1 199 SER . 1 200 ASN . 1 201 LEU . 1 202 PRO . 1 203 GLU . 1 204 ILE . 1 205 SER . 1 206 GLU . 1 207 TYR . 1 208 GLU . 1 209 ALA . 1 210 GLY . 1 211 SER . 1 212 THR . 1 213 ALA . 1 214 PRO . 1 215 LEU . 1 216 PHE . 1 217 THR . 1 218 ASP . 1 219 GLN . 1 220 PRO . 1 221 GLU . 1 222 GLU . 1 223 PRO . 1 224 GLU . 1 225 SER . 1 226 ASN . 1 227 THR . 1 228 THR . 1 229 HIS . 1 230 GLY . 1 231 ILE . 1 232 GLU . 1 233 LEU . 1 234 PHE . 1 235 GLU . 1 236 ASP . 1 237 SER . 1 238 GLN . 1 239 LEU . 1 240 THR . 1 241 THR . 1 242 ARG . 1 243 SER . 1 244 LYS . 1 245 ALA . 1 246 ILE . 1 247 ALA . 1 248 SER . 1 249 LYS . 1 250 THR . 1 251 LYS . 1 252 GLU . 1 253 ILE . 1 254 GLU . 1 255 GLN . 1 256 VAL . 1 257 ARG . 1 258 VAL . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? A . A 1 2 ALA 2 ? ? ? A . A 1 3 TYR 3 ? ? ? A . A 1 4 ARG 4 ? ? ? A . A 1 5 ARG 5 ? ? ? A . A 1 6 ASP 6 ? ? ? A . A 1 7 GLU 7 ? ? ? A . A 1 8 MET 8 ? ? ? A . A 1 9 TRP 9 ? ? ? A . A 1 10 SER 10 ? ? ? A . A 1 11 GLU 11 ? ? ? A . A 1 12 GLY 12 ? ? ? A . A 1 13 ARG 13 ? ? ? A . A 1 14 TYR 14 ? ? ? A . A 1 15 GLU 15 ? ? ? A . A 1 16 TYR 16 ? ? ? A . A 1 17 GLU 17 ? ? ? A . A 1 18 ARG 18 ? ? ? A . A 1 19 ILE 19 ? ? ? A . A 1 20 PRO 20 ? ? ? A . A 1 21 ARG 21 ? ? ? A . A 1 22 GLU 22 ? ? ? A . A 1 23 ARG 23 ? ? ? A . A 1 24 ALA 24 ? ? ? A . A 1 25 PRO 25 ? ? ? A . A 1 26 PRO 26 ? ? ? A . A 1 27 ARG 27 ? ? ? A . A 1 28 SER 28 ? ? ? A . A 1 29 HIS 29 ? ? ? A . A 1 30 PRO 30 ? ? ? A . A 1 31 SER 31 ? ? ? A . A 1 32 ASP 32 ? ? ? A . A 1 33 GLU 33 ? ? ? A . A 1 34 SER 34 ? ? ? A . A 1 35 GLY 35 ? ? ? A . A 1 36 TYR 36 ? ? ? A . A 1 37 ARG 37 ? ? ? A . A 1 38 TRP 38 ? ? ? A . A 1 39 THR 39 ? ? ? A . A 1 40 ARG 40 ? ? ? A . A 1 41 ASP 41 ? ? ? A . A 1 42 ASP 42 ? ? ? A . A 1 43 HIS 43 ? ? ? A . A 1 44 SER 44 ? ? ? A . A 1 45 ALA 45 ? ? ? A . A 1 46 SER 46 ? ? ? A . A 1 47 ARG 47 ? ? ? A . A 1 48 GLN 48 ? ? ? A . A 1 49 PRO 49 ? ? ? A . A 1 50 GLU 50 ? ? ? A . A 1 51 TYR 51 ? ? ? A . A 1 52 ARG 52 ? ? ? A . A 1 53 ASP 53 ? ? ? A . A 1 54 MET 54 ? ? ? A . A 1 55 ARG 55 ? ? ? A . A 1 56 ASP 56 ? ? ? A . A 1 57 GLY 57 ? ? ? A . A 1 58 PHE 58 ? ? ? A . A 1 59 ARG 59 ? ? ? A . A 1 60 ARG 60 ? ? ? A . A 1 61 LYS 61 ? ? ? A . A 1 62 SER 62 ? ? ? A . A 1 63 PHE 63 ? ? ? A . A 1 64 TYR 64 ? ? ? A . A 1 65 SER 65 ? ? ? A . A 1 66 SER 66 ? ? ? A . A 1 67 HIS 67 ? ? ? A . A 1 68 TYR 68 ? ? ? A . A 1 69 ALA 69 ? ? ? A . A 1 70 ARG 70 ? ? ? A . A 1 71 GLU 71 ? ? ? A . A 1 72 ARG 72 ? ? ? A . A 1 73 SER 73 ? ? ? A . A 1 74 PRO 74 ? ? ? A . A 1 75 TYR 75 ? ? ? A . A 1 76 LYS 76 ? ? ? A . A 1 77 ARG 77 ? ? ? A . A 1 78 ASP 78 ? ? ? A . A 1 79 ASN 79 ? ? ? A . A 1 80 THR 80 ? ? ? A . A 1 81 PHE 81 ? ? ? A . A 1 82 PHE 82 ? ? ? A . A 1 83 ARG 83 ? ? ? A . A 1 84 GLU 84 ? ? ? A . A 1 85 SER 85 ? ? ? A . A 1 86 PRO 86 ? ? ? A . A 1 87 VAL 87 ? ? ? A . A 1 88 GLY 88 ? ? ? A . A 1 89 ARG 89 ? ? ? A . A 1 90 LYS 90 ? ? ? A . A 1 91 ASP 91 ? ? ? A . A 1 92 SER 92 ? ? ? A . A 1 93 PRO 93 ? ? ? A . A 1 94 HIS 94 ? ? ? A . A 1 95 SER 95 ? ? ? A . A 1 96 ARG 96 ? ? ? A . A 1 97 SER 97 ? ? ? A . A 1 98 GLY 98 ? ? ? A . A 1 99 SER 99 ? ? ? A . A 1 100 SER 100 ? ? ? A . A 1 101 VAL 101 ? ? ? A . A 1 102 SER 102 ? ? ? A . A 1 103 SER 103 ? ? ? A . A 1 104 ARG 104 ? ? ? A . A 1 105 SER 105 ? ? ? A . A 1 106 TYR 106 ? ? ? A . A 1 107 SER 107 ? ? ? A . A 1 108 PRO 108 ? ? ? A . A 1 109 GLU 109 ? ? ? A . A 1 110 ARG 110 ? ? ? A . A 1 111 SER 111 ? ? ? A . A 1 112 LYS 112 ? ? ? A . A 1 113 SER 113 ? ? ? A . A 1 114 TYR 114 ? ? ? A . A 1 115 SER 115 ? ? ? A . A 1 116 PHE 116 ? ? ? A . A 1 117 HIS 117 ? ? ? A . A 1 118 GLN 118 ? ? ? A . A 1 119 SER 119 ? ? ? A . A 1 120 GLN 120 ? ? ? A . A 1 121 HIS 121 ? ? ? A . A 1 122 ARG 122 ? ? ? A . A 1 123 LYS 123 ? ? ? A . A 1 124 SER 124 ? ? ? A . A 1 125 VAL 125 ? ? ? A . A 1 126 ARG 126 ? ? ? A . A 1 127 PRO 127 ? ? ? A . A 1 128 GLY 128 ? ? ? A . A 1 129 ALA 129 ? ? ? A . A 1 130 SER 130 ? ? ? A . A 1 131 TYR 131 ? ? ? A . A 1 132 LYS 132 ? ? ? A . A 1 133 ARG 133 ? ? ? A . A 1 134 GLN 134 ? ? ? A . A 1 135 ASN 135 ? ? ? A . A 1 136 GLU 136 ? ? ? A . A 1 137 GLY 137 ? ? ? A . A 1 138 ASN 138 ? ? ? A . A 1 139 PRO 139 ? ? ? A . A 1 140 GLU 140 ? ? ? A . A 1 141 ARG 141 ? ? ? A . A 1 142 ASP 142 ? ? ? A . A 1 143 LYS 143 ? ? ? A . A 1 144 GLU 144 ? ? ? A . A 1 145 ARG 145 ? ? ? A . A 1 146 PRO 146 ? ? ? A . A 1 147 VAL 147 ? ? ? A . A 1 148 GLN 148 ? ? ? A . A 1 149 SER 149 ? ? ? A . A 1 150 LEU 150 ? ? ? A . A 1 151 LYS 151 ? ? ? A . A 1 152 THR 152 ? ? ? A . A 1 153 SER 153 ? ? ? A . A 1 154 ARG 154 ? ? ? A . A 1 155 ASP 155 ? ? ? A . A 1 156 THR 156 ? ? ? A . A 1 157 SER 157 ? ? ? A . A 1 158 PRO 158 ? ? ? A . A 1 159 SER 159 ? ? ? A . A 1 160 SER 160 ? ? ? A . A 1 161 GLY 161 ? ? ? A . A 1 162 SER 162 ? ? ? A . A 1 163 ALA 163 ? ? ? A . A 1 164 VAL 164 ? ? ? A . A 1 165 SER 165 ? ? ? A . A 1 166 SER 166 ? ? ? A . A 1 167 SER 167 ? ? ? A . A 1 168 LYS 168 ? ? ? A . A 1 169 VAL 169 ? ? ? A . A 1 170 LEU 170 ? ? ? A . A 1 171 ASP 171 ? ? ? A . A 1 172 LYS 172 ? ? ? A . A 1 173 PRO 173 ? ? ? A . A 1 174 SER 174 ? ? ? A . A 1 175 ARG 175 ? ? ? A . A 1 176 LEU 176 176 LEU LEU A . A 1 177 THR 177 177 THR THR A . A 1 178 GLU 178 178 GLU GLU A . A 1 179 LYS 179 179 LYS LYS A . A 1 180 GLU 180 180 GLU GLU A . A 1 181 LEU 181 181 LEU LEU A . A 1 182 ALA 182 182 ALA ALA A . A 1 183 GLU 183 183 GLU GLU A . A 1 184 ALA 184 184 ALA ALA A . A 1 185 ALA 185 185 ALA ALA A . A 1 186 SER 186 186 SER SER A . A 1 187 LYS 187 187 LYS LYS A . A 1 188 TRP 188 188 TRP TRP A . A 1 189 ALA 189 189 ALA ALA A . A 1 190 ALA 190 190 ALA ALA A . A 1 191 GLU 191 191 GLU GLU A . A 1 192 LYS 192 192 LYS LYS A . A 1 193 LEU 193 193 LEU LEU A . A 1 194 GLU 194 194 GLU GLU A . A 1 195 LYS 195 195 LYS LYS A . A 1 196 SER 196 196 SER SER A . A 1 197 ASP 197 197 ASP ASP A . A 1 198 GLU 198 198 GLU GLU A . A 1 199 SER 199 199 SER SER A . A 1 200 ASN 200 200 ASN ASN A . A 1 201 LEU 201 201 LEU LEU A . A 1 202 PRO 202 202 PRO PRO A . A 1 203 GLU 203 ? ? ? A . A 1 204 ILE 204 ? ? ? A . A 1 205 SER 205 ? ? ? A . A 1 206 GLU 206 ? ? ? A . A 1 207 TYR 207 ? ? ? A . A 1 208 GLU 208 ? ? ? A . A 1 209 ALA 209 ? ? ? A . A 1 210 GLY 210 ? ? ? A . A 1 211 SER 211 ? ? ? A . A 1 212 THR 212 ? ? ? A . A 1 213 ALA 213 ? ? ? A . A 1 214 PRO 214 ? ? ? A . A 1 215 LEU 215 ? ? ? A . A 1 216 PHE 216 ? ? ? A . A 1 217 THR 217 ? ? ? A . A 1 218 ASP 218 ? ? ? A . A 1 219 GLN 219 ? ? ? A . A 1 220 PRO 220 ? ? ? A . A 1 221 GLU 221 ? ? ? A . A 1 222 GLU 222 ? ? ? A . A 1 223 PRO 223 ? ? ? A . A 1 224 GLU 224 ? ? ? A . A 1 225 SER 225 ? ? ? A . A 1 226 ASN 226 ? ? ? A . A 1 227 THR 227 ? ? ? A . A 1 228 THR 228 ? ? ? A . A 1 229 HIS 229 ? ? ? A . A 1 230 GLY 230 ? ? ? A . A 1 231 ILE 231 ? ? ? A . A 1 232 GLU 232 ? ? ? A . A 1 233 LEU 233 ? ? ? A . A 1 234 PHE 234 ? ? ? A . A 1 235 GLU 235 ? ? ? A . A 1 236 ASP 236 ? ? ? A . A 1 237 SER 237 ? ? ? A . A 1 238 GLN 238 ? ? ? A . A 1 239 LEU 239 ? ? ? A . A 1 240 THR 240 ? ? ? A . A 1 241 THR 241 ? ? ? A . A 1 242 ARG 242 ? ? ? A . A 1 243 SER 243 ? ? ? A . A 1 244 LYS 244 ? ? ? A . A 1 245 ALA 245 ? ? ? A . A 1 246 ILE 246 ? ? ? A . A 1 247 ALA 247 ? ? ? A . A 1 248 SER 248 ? ? ? A . A 1 249 LYS 249 ? ? ? A . A 1 250 THR 250 ? ? ? A . A 1 251 LYS 251 ? ? ? A . A 1 252 GLU 252 ? ? ? A . A 1 253 ILE 253 ? ? ? A . A 1 254 GLU 254 ? ? ? A . A 1 255 GLN 255 ? ? ? A . A 1 256 VAL 256 ? ? ? A . A 1 257 ARG 257 ? ? ? A . A 1 258 VAL 258 ? ? ? A . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Minor nucleoprotein VP30 {PDB ID=2i8b, label_asym_id=A, auth_asym_id=A, SMTL ID=2i8b.1.A}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 2i8b, label_asym_id=A' 'target-template alignment' . 4 'model 2' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-07 6 PDB https://www.wwpdb.org . 2024-11-01 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A A 1 1 A # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;HHHHHHDYDIPTTENLYFQGAITLLTLIKTAEHWARQDIRTIEDSKLRALLTLCAVMTRKFSKSQLSLLC ETHLRREGLGQDQAEPVLEVYQRLHSDKGGSFEAALWQQWDRQSLIMFITAFLNIALQLPCESSAVVVSG LRTLVPQSDNEE ; ;HHHHHHDYDIPTTENLYFQGAITLLTLIKTAEHWARQDIRTIEDSKLRALLTLCAVMTRKFSKSQLSLLC ETHLRREGLGQDQAEPVLEVYQRLHSDKGGSFEAALWQQWDRQSLIMFITAFLNIALQLPCESSAVVVSG LRTLVPQSDNEE ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 22 48 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 2i8b 2024-10-09 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 258 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 258 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 3400.000 25.926 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVRV 2 1 2 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITLLTLIKTAEHWARQDIRTIEDSKLR-------------------------------------------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 2i8b.1, oligomeric state (monomer) as predicted' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 2' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . LEU 176 176 ? A 16.687 45.309 7.419 1 1 A LEU 0.530 1 ATOM 2 C CA . LEU 176 176 ? A 16.195 43.989 7.945 1 1 A LEU 0.530 1 ATOM 3 C C . LEU 176 176 ? A 17.073 42.883 7.425 1 1 A LEU 0.530 1 ATOM 4 O O . LEU 176 176 ? A 17.343 42.849 6.231 1 1 A LEU 0.530 1 ATOM 5 C CB . LEU 176 176 ? A 14.731 43.775 7.472 1 1 A LEU 0.530 1 ATOM 6 C CG . LEU 176 176 ? A 13.704 44.718 8.129 1 1 A LEU 0.530 1 ATOM 7 C CD1 . LEU 176 176 ? A 12.319 44.499 7.497 1 1 A LEU 0.530 1 ATOM 8 C CD2 . LEU 176 176 ? A 13.636 44.494 9.651 1 1 A LEU 0.530 1 ATOM 9 N N . THR 177 177 ? A 17.593 42.002 8.301 1 1 A THR 0.620 1 ATOM 10 C CA . THR 177 177 ? A 18.505 40.937 7.905 1 1 A THR 0.620 1 ATOM 11 C C . THR 177 177 ? A 17.748 39.644 7.706 1 1 A THR 0.620 1 ATOM 12 O O . THR 177 177 ? A 16.592 39.520 8.100 1 1 A THR 0.620 1 ATOM 13 C CB . THR 177 177 ? A 19.636 40.697 8.910 1 1 A THR 0.620 1 ATOM 14 O OG1 . THR 177 177 ? A 19.176 40.186 10.155 1 1 A THR 0.620 1 ATOM 15 C CG2 . THR 177 177 ? A 20.348 42.027 9.198 1 1 A THR 0.620 1 ATOM 16 N N . GLU 178 178 ? A 18.406 38.625 7.112 1 1 A GLU 0.650 1 ATOM 17 C CA . GLU 178 178 ? A 17.893 37.268 7.052 1 1 A GLU 0.650 1 ATOM 18 C C . GLU 178 178 ? A 17.607 36.656 8.425 1 1 A GLU 0.650 1 ATOM 19 O O . GLU 178 178 ? A 16.554 36.062 8.652 1 1 A GLU 0.650 1 ATOM 20 C CB . GLU 178 178 ? A 18.920 36.372 6.332 1 1 A GLU 0.650 1 ATOM 21 C CG . GLU 178 178 ? A 18.470 34.898 6.187 1 1 A GLU 0.650 1 ATOM 22 C CD . GLU 178 178 ? A 19.504 34.037 5.473 1 1 A GLU 0.650 1 ATOM 23 O OE1 . GLU 178 178 ? A 19.207 32.828 5.307 1 1 A GLU 0.650 1 ATOM 24 O OE2 . GLU 178 178 ? A 20.585 34.571 5.120 1 1 A GLU 0.650 1 ATOM 25 N N . LYS 179 179 ? A 18.523 36.844 9.406 1 1 A LYS 0.680 1 ATOM 26 C CA . LYS 179 179 ? A 18.322 36.385 10.772 1 1 A LYS 0.680 1 ATOM 27 C C . LYS 179 179 ? A 17.117 37.003 11.466 1 1 A LYS 0.680 1 ATOM 28 O O . LYS 179 179 ? A 16.282 36.271 11.988 1 1 A LYS 0.680 1 ATOM 29 C CB . LYS 179 179 ? A 19.582 36.623 11.639 1 1 A LYS 0.680 1 ATOM 30 C CG . LYS 179 179 ? A 20.733 35.671 11.286 1 1 A LYS 0.680 1 ATOM 31 C CD . LYS 179 179 ? A 21.967 35.894 12.173 1 1 A LYS 0.680 1 ATOM 32 C CE . LYS 179 179 ? A 23.116 34.940 11.831 1 1 A LYS 0.680 1 ATOM 33 N NZ . LYS 179 179 ? A 24.300 35.236 12.666 1 1 A LYS 0.680 1 ATOM 34 N N . GLU 180 180 ? A 16.942 38.346 11.420 1 1 A GLU 0.650 1 ATOM 35 C CA . GLU 180 180 ? A 15.792 38.999 12.026 1 1 A GLU 0.650 1 ATOM 36 C C . GLU 180 180 ? A 14.485 38.626 11.354 1 1 A GLU 0.650 1 ATOM 37 O O . GLU 180 180 ? A 13.465 38.454 12.016 1 1 A GLU 0.650 1 ATOM 38 C CB . GLU 180 180 ? A 15.928 40.532 12.056 1 1 A GLU 0.650 1 ATOM 39 C CG . GLU 180 180 ? A 17.018 41.040 13.026 1 1 A GLU 0.650 1 ATOM 40 C CD . GLU 180 180 ? A 17.169 42.557 12.954 1 1 A GLU 0.650 1 ATOM 41 O OE1 . GLU 180 180 ? A 16.599 43.176 12.009 1 1 A GLU 0.650 1 ATOM 42 O OE2 . GLU 180 180 ? A 17.915 43.102 13.804 1 1 A GLU 0.650 1 ATOM 43 N N . LEU 181 181 ? A 14.485 38.440 10.011 1 1 A LEU 0.630 1 ATOM 44 C CA . LEU 181 181 ? A 13.335 37.917 9.292 1 1 A LEU 0.630 1 ATOM 45 C C . LEU 181 181 ? A 12.895 36.545 9.784 1 1 A LEU 0.630 1 ATOM 46 O O . LEU 181 181 ? A 11.715 36.323 10.057 1 1 A LEU 0.630 1 ATOM 47 C CB . LEU 181 181 ? A 13.647 37.764 7.776 1 1 A LEU 0.630 1 ATOM 48 C CG . LEU 181 181 ? A 13.356 38.972 6.862 1 1 A LEU 0.630 1 ATOM 49 C CD1 . LEU 181 181 ? A 13.542 38.520 5.401 1 1 A LEU 0.630 1 ATOM 50 C CD2 . LEU 181 181 ? A 11.936 39.546 7.042 1 1 A LEU 0.630 1 ATOM 51 N N . ALA 182 182 ? A 13.841 35.599 9.945 1 1 A ALA 0.730 1 ATOM 52 C CA . ALA 182 182 ? A 13.546 34.284 10.464 1 1 A ALA 0.730 1 ATOM 53 C C . ALA 182 182 ? A 13.122 34.278 11.930 1 1 A ALA 0.730 1 ATOM 54 O O . ALA 182 182 ? A 12.136 33.636 12.281 1 1 A ALA 0.730 1 ATOM 55 C CB . ALA 182 182 ? A 14.740 33.344 10.227 1 1 A ALA 0.730 1 ATOM 56 N N . GLU 183 183 ? A 13.803 35.035 12.822 1 1 A GLU 0.660 1 ATOM 57 C CA . GLU 183 183 ? A 13.412 35.171 14.217 1 1 A GLU 0.660 1 ATOM 58 C C . GLU 183 183 ? A 12.034 35.789 14.396 1 1 A GLU 0.660 1 ATOM 59 O O . GLU 183 183 ? A 11.227 35.320 15.200 1 1 A GLU 0.660 1 ATOM 60 C CB . GLU 183 183 ? A 14.446 35.993 15.013 1 1 A GLU 0.660 1 ATOM 61 C CG . GLU 183 183 ? A 15.794 35.256 15.205 1 1 A GLU 0.660 1 ATOM 62 C CD . GLU 183 183 ? A 16.832 36.094 15.946 1 1 A GLU 0.660 1 ATOM 63 O OE1 . GLU 183 183 ? A 16.536 37.270 16.272 1 1 A GLU 0.660 1 ATOM 64 O OE2 . GLU 183 183 ? A 17.940 35.543 16.183 1 1 A GLU 0.660 1 ATOM 65 N N . ALA 184 184 ? A 11.699 36.831 13.603 1 1 A ALA 0.690 1 ATOM 66 C CA . ALA 184 184 ? A 10.377 37.411 13.585 1 1 A ALA 0.690 1 ATOM 67 C C . ALA 184 184 ? A 9.307 36.432 13.104 1 1 A ALA 0.690 1 ATOM 68 O O . ALA 184 184 ? A 8.271 36.273 13.747 1 1 A ALA 0.690 1 ATOM 69 C CB . ALA 184 184 ? A 10.376 38.684 12.713 1 1 A ALA 0.690 1 ATOM 70 N N . ALA 185 185 ? A 9.554 35.682 12.006 1 1 A ALA 0.650 1 ATOM 71 C CA . ALA 185 185 ? A 8.651 34.638 11.557 1 1 A ALA 0.650 1 ATOM 72 C C . ALA 185 185 ? A 8.454 33.530 12.585 1 1 A ALA 0.650 1 ATOM 73 O O . ALA 185 185 ? A 7.326 33.118 12.837 1 1 A ALA 0.650 1 ATOM 74 C CB . ALA 185 185 ? A 9.166 34.000 10.251 1 1 A ALA 0.650 1 ATOM 75 N N . SER 186 186 ? A 9.535 33.058 13.244 1 1 A SER 0.590 1 ATOM 76 C CA . SER 186 186 ? A 9.473 32.046 14.293 1 1 A SER 0.590 1 ATOM 77 C C . SER 186 186 ? A 8.657 32.458 15.486 1 1 A SER 0.590 1 ATOM 78 O O . SER 186 186 ? A 7.871 31.670 15.998 1 1 A SER 0.590 1 ATOM 79 C CB . SER 186 186 ? A 10.858 31.661 14.864 1 1 A SER 0.590 1 ATOM 80 O OG . SER 186 186 ? A 11.621 30.970 13.879 1 1 A SER 0.590 1 ATOM 81 N N . LYS 187 187 ? A 8.814 33.722 15.942 1 1 A LYS 0.540 1 ATOM 82 C CA . LYS 187 187 ? A 7.975 34.289 16.976 1 1 A LYS 0.540 1 ATOM 83 C C . LYS 187 187 ? A 6.503 34.312 16.596 1 1 A LYS 0.540 1 ATOM 84 O O . LYS 187 187 ? A 5.676 33.757 17.305 1 1 A LYS 0.540 1 ATOM 85 C CB . LYS 187 187 ? A 8.443 35.737 17.283 1 1 A LYS 0.540 1 ATOM 86 C CG . LYS 187 187 ? A 7.640 36.446 18.387 1 1 A LYS 0.540 1 ATOM 87 C CD . LYS 187 187 ? A 8.163 37.857 18.688 1 1 A LYS 0.540 1 ATOM 88 C CE . LYS 187 187 ? A 7.326 38.561 19.759 1 1 A LYS 0.540 1 ATOM 89 N NZ . LYS 187 187 ? A 7.877 39.906 20.031 1 1 A LYS 0.540 1 ATOM 90 N N . TRP 188 188 ? A 6.135 34.882 15.429 1 1 A TRP 0.400 1 ATOM 91 C CA . TRP 188 188 ? A 4.737 35.093 15.098 1 1 A TRP 0.400 1 ATOM 92 C C . TRP 188 188 ? A 4.038 33.869 14.526 1 1 A TRP 0.400 1 ATOM 93 O O . TRP 188 188 ? A 2.814 33.814 14.504 1 1 A TRP 0.400 1 ATOM 94 C CB . TRP 188 188 ? A 4.587 36.306 14.148 1 1 A TRP 0.400 1 ATOM 95 C CG . TRP 188 188 ? A 4.891 37.633 14.851 1 1 A TRP 0.400 1 ATOM 96 C CD1 . TRP 188 188 ? A 6.062 38.333 14.915 1 1 A TRP 0.400 1 ATOM 97 C CD2 . TRP 188 188 ? A 3.956 38.358 15.670 1 1 A TRP 0.400 1 ATOM 98 N NE1 . TRP 188 188 ? A 5.930 39.442 15.729 1 1 A TRP 0.400 1 ATOM 99 C CE2 . TRP 188 188 ? A 4.629 39.480 16.190 1 1 A TRP 0.400 1 ATOM 100 C CE3 . TRP 188 188 ? A 2.628 38.119 15.981 1 1 A TRP 0.400 1 ATOM 101 C CZ2 . TRP 188 188 ? A 3.965 40.396 17.003 1 1 A TRP 0.400 1 ATOM 102 C CZ3 . TRP 188 188 ? A 1.956 39.030 16.807 1 1 A TRP 0.400 1 ATOM 103 C CH2 . TRP 188 188 ? A 2.612 40.163 17.306 1 1 A TRP 0.400 1 ATOM 104 N N . ALA 189 189 ? A 4.785 32.831 14.093 1 1 A ALA 0.450 1 ATOM 105 C CA . ALA 189 189 ? A 4.243 31.562 13.648 1 1 A ALA 0.450 1 ATOM 106 C C . ALA 189 189 ? A 3.460 30.793 14.710 1 1 A ALA 0.450 1 ATOM 107 O O . ALA 189 189 ? A 2.471 30.134 14.400 1 1 A ALA 0.450 1 ATOM 108 C CB . ALA 189 189 ? A 5.383 30.660 13.125 1 1 A ALA 0.450 1 ATOM 109 N N . ALA 190 190 ? A 3.893 30.848 15.989 1 1 A ALA 0.370 1 ATOM 110 C CA . ALA 190 190 ? A 3.231 30.145 17.067 1 1 A ALA 0.370 1 ATOM 111 C C . ALA 190 190 ? A 2.338 31.049 17.908 1 1 A ALA 0.370 1 ATOM 112 O O . ALA 190 190 ? A 1.669 30.576 18.825 1 1 A ALA 0.370 1 ATOM 113 C CB . ALA 190 190 ? A 4.289 29.464 17.959 1 1 A ALA 0.370 1 ATOM 114 N N . GLU 191 191 ? A 2.256 32.360 17.602 1 1 A GLU 0.360 1 ATOM 115 C CA . GLU 191 191 ? A 1.305 33.241 18.247 1 1 A GLU 0.360 1 ATOM 116 C C . GLU 191 191 ? A -0.118 32.997 17.776 1 1 A GLU 0.360 1 ATOM 117 O O . GLU 191 191 ? A -0.398 32.638 16.635 1 1 A GLU 0.360 1 ATOM 118 C CB . GLU 191 191 ? A 1.637 34.736 18.024 1 1 A GLU 0.360 1 ATOM 119 C CG . GLU 191 191 ? A 2.979 35.197 18.637 1 1 A GLU 0.360 1 ATOM 120 C CD . GLU 191 191 ? A 3.009 35.208 20.160 1 1 A GLU 0.360 1 ATOM 121 O OE1 . GLU 191 191 ? A 1.978 35.589 20.768 1 1 A GLU 0.360 1 ATOM 122 O OE2 . GLU 191 191 ? A 4.091 34.887 20.718 1 1 A GLU 0.360 1 ATOM 123 N N . LYS 192 192 ? A -1.100 33.246 18.655 1 1 A LYS 0.390 1 ATOM 124 C CA . LYS 192 192 ? A -2.476 33.316 18.223 1 1 A LYS 0.390 1 ATOM 125 C C . LYS 192 192 ? A -2.798 34.745 17.798 1 1 A LYS 0.390 1 ATOM 126 O O . LYS 192 192 ? A -2.923 35.645 18.622 1 1 A LYS 0.390 1 ATOM 127 C CB . LYS 192 192 ? A -3.413 32.866 19.361 1 1 A LYS 0.390 1 ATOM 128 C CG . LYS 192 192 ? A -4.891 32.804 18.965 1 1 A LYS 0.390 1 ATOM 129 C CD . LYS 192 192 ? A -5.756 32.274 20.115 1 1 A LYS 0.390 1 ATOM 130 C CE . LYS 192 192 ? A -7.223 32.226 19.714 1 1 A LYS 0.390 1 ATOM 131 N NZ . LYS 192 192 ? A -8.101 31.739 20.792 1 1 A LYS 0.390 1 ATOM 132 N N . LEU 193 193 ? A -2.962 34.992 16.479 1 1 A LEU 0.410 1 ATOM 133 C CA . LEU 193 193 ? A -3.104 36.339 15.938 1 1 A LEU 0.410 1 ATOM 134 C C . LEU 193 193 ? A -4.544 36.712 15.653 1 1 A LEU 0.410 1 ATOM 135 O O . LEU 193 193 ? A -4.813 37.761 15.082 1 1 A LEU 0.410 1 ATOM 136 C CB . LEU 193 193 ? A -2.296 36.528 14.631 1 1 A LEU 0.410 1 ATOM 137 C CG . LEU 193 193 ? A -0.809 36.836 14.856 1 1 A LEU 0.410 1 ATOM 138 C CD1 . LEU 193 193 ? A -0.037 35.521 14.974 1 1 A LEU 0.410 1 ATOM 139 C CD2 . LEU 193 193 ? A -0.266 37.729 13.728 1 1 A LEU 0.410 1 ATOM 140 N N . GLU 194 194 ? A -5.515 35.891 16.100 1 1 A GLU 0.440 1 ATOM 141 C CA . GLU 194 194 ? A -6.943 36.075 15.870 1 1 A GLU 0.440 1 ATOM 142 C C . GLU 194 194 ? A -7.494 37.451 16.263 1 1 A GLU 0.440 1 ATOM 143 O O . GLU 194 194 ? A -8.374 38.002 15.609 1 1 A GLU 0.440 1 ATOM 144 C CB . GLU 194 194 ? A -7.712 34.982 16.662 1 1 A GLU 0.440 1 ATOM 145 C CG . GLU 194 194 ? A -9.257 35.015 16.508 1 1 A GLU 0.440 1 ATOM 146 C CD . GLU 194 194 ? A -9.995 33.977 17.353 1 1 A GLU 0.440 1 ATOM 147 O OE1 . GLU 194 194 ? A -11.248 33.994 17.326 1 1 A GLU 0.440 1 ATOM 148 O OE2 . GLU 194 194 ? A -9.333 33.203 18.094 1 1 A GLU 0.440 1 ATOM 149 N N . LYS 195 195 ? A -6.972 38.041 17.357 1 1 A LYS 0.490 1 ATOM 150 C CA . LYS 195 195 ? A -7.462 39.293 17.892 1 1 A LYS 0.490 1 ATOM 151 C C . LYS 195 195 ? A -6.437 40.407 17.855 1 1 A LYS 0.490 1 ATOM 152 O O . LYS 195 195 ? A -6.651 41.444 18.473 1 1 A LYS 0.490 1 ATOM 153 C CB . LYS 195 195 ? A -7.857 39.096 19.370 1 1 A LYS 0.490 1 ATOM 154 C CG . LYS 195 195 ? A -9.012 38.108 19.550 1 1 A LYS 0.490 1 ATOM 155 C CD . LYS 195 195 ? A -9.443 38.008 21.017 1 1 A LYS 0.490 1 ATOM 156 C CE . LYS 195 195 ? A -10.638 37.072 21.201 1 1 A LYS 0.490 1 ATOM 157 N NZ . LYS 195 195 ? A -11.008 36.991 22.630 1 1 A LYS 0.490 1 ATOM 158 N N . SER 196 196 ? A -5.280 40.243 17.173 1 1 A SER 0.490 1 ATOM 159 C CA . SER 196 196 ? A -4.307 41.329 17.086 1 1 A SER 0.490 1 ATOM 160 C C . SER 196 196 ? A -4.807 42.501 16.272 1 1 A SER 0.490 1 ATOM 161 O O . SER 196 196 ? A -5.647 42.349 15.387 1 1 A SER 0.490 1 ATOM 162 C CB . SER 196 196 ? A -2.895 40.891 16.603 1 1 A SER 0.490 1 ATOM 163 O OG . SER 196 196 ? A -2.898 40.409 15.258 1 1 A SER 0.490 1 ATOM 164 N N . ASP 197 197 ? A -4.325 43.724 16.584 1 1 A ASP 0.500 1 ATOM 165 C CA . ASP 197 197 ? A -4.770 44.919 15.903 1 1 A ASP 0.500 1 ATOM 166 C C . ASP 197 197 ? A -4.523 44.931 14.422 1 1 A ASP 0.500 1 ATOM 167 O O . ASP 197 197 ? A -3.565 44.350 13.907 1 1 A ASP 0.500 1 ATOM 168 C CB . ASP 197 197 ? A -4.139 46.222 16.462 1 1 A ASP 0.500 1 ATOM 169 C CG . ASP 197 197 ? A -4.772 46.579 17.787 1 1 A ASP 0.500 1 ATOM 170 O OD1 . ASP 197 197 ? A -5.847 46.015 18.095 1 1 A ASP 0.500 1 ATOM 171 O OD2 . ASP 197 197 ? A -4.193 47.453 18.475 1 1 A ASP 0.500 1 ATOM 172 N N . GLU 198 198 ? A -5.370 45.706 13.712 1 1 A GLU 0.470 1 ATOM 173 C CA . GLU 198 198 ? A -5.174 45.982 12.302 1 1 A GLU 0.470 1 ATOM 174 C C . GLU 198 198 ? A -3.845 46.677 12.019 1 1 A GLU 0.470 1 ATOM 175 O O . GLU 198 198 ? A -3.441 46.745 10.930 1 1 A GLU 0.470 1 ATOM 176 C CB . GLU 198 198 ? A -6.277 46.828 11.560 1 1 A GLU 0.470 1 ATOM 177 C CG . GLU 198 198 ? A -6.159 46.923 9.995 1 1 A GLU 0.470 1 ATOM 178 C CD . GLU 198 198 ? A -7.094 47.944 9.347 1 1 A GLU 0.470 1 ATOM 179 O OE1 . GLU 198 198 ? A -6.997 48.085 8.100 1 1 A GLU 0.470 1 ATOM 180 O OE2 . GLU 198 198 ? A -7.860 48.613 10.085 1 1 A GLU 0.470 1 ATOM 181 N N . SER 199 199 ? A -3.071 47.265 12.959 1 1 A SER 0.500 1 ATOM 182 C CA . SER 199 199 ? A -1.732 47.619 12.496 1 1 A SER 0.500 1 ATOM 183 C C . SER 199 199 ? A -0.688 46.511 12.372 1 1 A SER 0.500 1 ATOM 184 O O . SER 199 199 ? A 0.153 46.601 11.491 1 1 A SER 0.500 1 ATOM 185 C CB . SER 199 199 ? A -1.191 48.674 13.430 1 1 A SER 0.500 1 ATOM 186 O OG . SER 199 199 ? A -1.289 48.165 14.762 1 1 A SER 0.500 1 ATOM 187 N N . ASN 200 200 ? A -0.707 45.472 13.239 1 1 A ASN 0.470 1 ATOM 188 C CA . ASN 200 200 ? A 0.279 44.389 13.266 1 1 A ASN 0.470 1 ATOM 189 C C . ASN 200 200 ? A -0.038 43.227 12.322 1 1 A ASN 0.470 1 ATOM 190 O O . ASN 200 200 ? A 0.830 42.421 12.016 1 1 A ASN 0.470 1 ATOM 191 C CB . ASN 200 200 ? A 0.337 43.786 14.699 1 1 A ASN 0.470 1 ATOM 192 C CG . ASN 200 200 ? A 1.037 44.736 15.658 1 1 A ASN 0.470 1 ATOM 193 O OD1 . ASN 200 200 ? A 1.913 45.519 15.301 1 1 A ASN 0.470 1 ATOM 194 N ND2 . ASN 200 200 ? A 0.686 44.651 16.963 1 1 A ASN 0.470 1 ATOM 195 N N . LEU 201 201 ? A -1.308 43.084 11.891 1 1 A LEU 0.570 1 ATOM 196 C CA . LEU 201 201 ? A -1.705 42.221 10.777 1 1 A LEU 0.570 1 ATOM 197 C C . LEU 201 201 ? A -1.201 42.573 9.316 1 1 A LEU 0.570 1 ATOM 198 O O . LEU 201 201 ? A -0.894 41.636 8.583 1 1 A LEU 0.570 1 ATOM 199 C CB . LEU 201 201 ? A -3.246 41.967 10.875 1 1 A LEU 0.570 1 ATOM 200 C CG . LEU 201 201 ? A -3.793 40.902 9.904 1 1 A LEU 0.570 1 ATOM 201 C CD1 . LEU 201 201 ? A -3.263 39.497 10.241 1 1 A LEU 0.570 1 ATOM 202 C CD2 . LEU 201 201 ? A -5.330 40.913 9.885 1 1 A LEU 0.570 1 ATOM 203 N N . PRO 202 202 ? A -1.152 43.833 8.858 1 1 A PRO 0.550 1 ATOM 204 C CA . PRO 202 202 ? A -0.504 44.384 7.633 1 1 A PRO 0.550 1 ATOM 205 C C . PRO 202 202 ? A 1.015 44.318 7.569 1 1 A PRO 0.550 1 ATOM 206 O O . PRO 202 202 ? A 1.644 43.842 8.546 1 1 A PRO 0.550 1 ATOM 207 C CB . PRO 202 202 ? A -0.849 45.883 7.669 1 1 A PRO 0.550 1 ATOM 208 C CG . PRO 202 202 ? A -2.091 46.005 8.507 1 1 A PRO 0.550 1 ATOM 209 C CD . PRO 202 202 ? A -2.117 44.752 9.382 1 1 A PRO 0.550 1 ATOM 210 O OXT . PRO 202 202 ? A 1.592 44.793 6.542 1 1 A PRO 0.550 1 # # loop_ _atom_type.symbol C N O # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.536 2 1 3 0.028 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 176 LEU 1 0.530 2 1 A 177 THR 1 0.620 3 1 A 178 GLU 1 0.650 4 1 A 179 LYS 1 0.680 5 1 A 180 GLU 1 0.650 6 1 A 181 LEU 1 0.630 7 1 A 182 ALA 1 0.730 8 1 A 183 GLU 1 0.660 9 1 A 184 ALA 1 0.690 10 1 A 185 ALA 1 0.650 11 1 A 186 SER 1 0.590 12 1 A 187 LYS 1 0.540 13 1 A 188 TRP 1 0.400 14 1 A 189 ALA 1 0.450 15 1 A 190 ALA 1 0.370 16 1 A 191 GLU 1 0.360 17 1 A 192 LYS 1 0.390 18 1 A 193 LEU 1 0.410 19 1 A 194 GLU 1 0.440 20 1 A 195 LYS 1 0.490 21 1 A 196 SER 1 0.490 22 1 A 197 ASP 1 0.500 23 1 A 198 GLU 1 0.470 24 1 A 199 SER 1 0.500 25 1 A 200 ASN 1 0.470 26 1 A 201 LEU 1 0.570 27 1 A 202 PRO 1 0.550 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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