data_SMR-f822e7217970635ee2476b294ff55993_3 _entry.id SMR-f822e7217970635ee2476b294ff55993_3 _struct.entry_id SMR-f822e7217970635ee2476b294ff55993_3 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - A0A6P5R9F0/ A0A6P5R9F0_MUSCR, Vesicle-associated membrane protein-associated protein A - Q9WV55/ VAPA_MOUSE, Vesicle-associated membrane protein-associated protein A Estimated model accuracy of this model is 0.035, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries A0A6P5R9F0, Q9WV55' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 32363.365 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP VAPA_MOUSE Q9WV55 1 ;MASASGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDP GSIVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLN DMEPSKAVPLNASKQDGPLPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSD KPGSTSAVSFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL ; 'Vesicle-associated membrane protein-associated protein A' 2 1 UNP A0A6P5R9F0_MUSCR A0A6P5R9F0 1 ;MASASGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDP GSIVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLN DMEPSKAVPLNASKQDGPLPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSD KPGSTSAVSFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL ; 'Vesicle-associated membrane protein-associated protein A' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 249 1 249 2 2 1 249 1 249 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . VAPA_MOUSE Q9WV55 . 1 249 10090 'Mus musculus (Mouse)' 2007-01-09 FE8F956C1F2C71CA 1 UNP . A0A6P5R9F0_MUSCR A0A6P5R9F0 . 1 249 10089 'Mus caroli (Ryukyu mouse) (Ricefield mouse)' 2020-12-02 FE8F956C1F2C71CA # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no B ;MASASGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDP GSIVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLN DMEPSKAVPLNASKQDGPLPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSD KPGSTSAVSFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL ; ;MASASGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDP GSIVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLN DMEPSKAVPLNASKQDGPLPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSD KPGSTSAVSFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 ALA . 1 3 SER . 1 4 ALA . 1 5 SER . 1 6 GLY . 1 7 ALA . 1 8 MET . 1 9 ALA . 1 10 LYS . 1 11 HIS . 1 12 GLU . 1 13 GLN . 1 14 ILE . 1 15 LEU . 1 16 VAL . 1 17 LEU . 1 18 ASP . 1 19 PRO . 1 20 PRO . 1 21 SER . 1 22 ASP . 1 23 LEU . 1 24 LYS . 1 25 PHE . 1 26 LYS . 1 27 GLY . 1 28 PRO . 1 29 PHE . 1 30 THR . 1 31 ASP . 1 32 VAL . 1 33 VAL . 1 34 THR . 1 35 THR . 1 36 ASN . 1 37 LEU . 1 38 LYS . 1 39 LEU . 1 40 GLN . 1 41 ASN . 1 42 PRO . 1 43 SER . 1 44 ASP . 1 45 ARG . 1 46 LYS . 1 47 VAL . 1 48 CYS . 1 49 PHE . 1 50 LYS . 1 51 VAL . 1 52 LYS . 1 53 THR . 1 54 THR . 1 55 ALA . 1 56 PRO . 1 57 ARG . 1 58 ARG . 1 59 TYR . 1 60 CYS . 1 61 VAL . 1 62 ARG . 1 63 PRO . 1 64 ASN . 1 65 SER . 1 66 GLY . 1 67 ILE . 1 68 ILE . 1 69 ASP . 1 70 PRO . 1 71 GLY . 1 72 SER . 1 73 ILE . 1 74 VAL . 1 75 THR . 1 76 VAL . 1 77 SER . 1 78 VAL . 1 79 MET . 1 80 LEU . 1 81 GLN . 1 82 PRO . 1 83 PHE . 1 84 ASP . 1 85 TYR . 1 86 ASP . 1 87 PRO . 1 88 ASN . 1 89 GLU . 1 90 LYS . 1 91 SER . 1 92 LYS . 1 93 HIS . 1 94 LYS . 1 95 PHE . 1 96 MET . 1 97 VAL . 1 98 GLN . 1 99 THR . 1 100 ILE . 1 101 PHE . 1 102 ALA . 1 103 PRO . 1 104 PRO . 1 105 ASN . 1 106 ILE . 1 107 SER . 1 108 ASP . 1 109 MET . 1 110 GLU . 1 111 ALA . 1 112 VAL . 1 113 TRP . 1 114 LYS . 1 115 GLU . 1 116 ALA . 1 117 LYS . 1 118 PRO . 1 119 ASP . 1 120 GLU . 1 121 LEU . 1 122 MET . 1 123 ASP . 1 124 SER . 1 125 LYS . 1 126 LEU . 1 127 ARG . 1 128 CYS . 1 129 VAL . 1 130 PHE . 1 131 GLU . 1 132 MET . 1 133 PRO . 1 134 ASN . 1 135 GLU . 1 136 ASN . 1 137 ASP . 1 138 LYS . 1 139 LEU . 1 140 ASN . 1 141 ASP . 1 142 MET . 1 143 GLU . 1 144 PRO . 1 145 SER . 1 146 LYS . 1 147 ALA . 1 148 VAL . 1 149 PRO . 1 150 LEU . 1 151 ASN . 1 152 ALA . 1 153 SER . 1 154 LYS . 1 155 GLN . 1 156 ASP . 1 157 GLY . 1 158 PRO . 1 159 LEU . 1 160 PRO . 1 161 LYS . 1 162 PRO . 1 163 HIS . 1 164 SER . 1 165 VAL . 1 166 SER . 1 167 LEU . 1 168 ASN . 1 169 ASP . 1 170 THR . 1 171 GLU . 1 172 THR . 1 173 ARG . 1 174 LYS . 1 175 LEU . 1 176 MET . 1 177 GLU . 1 178 GLU . 1 179 CYS . 1 180 LYS . 1 181 ARG . 1 182 LEU . 1 183 GLN . 1 184 GLY . 1 185 GLU . 1 186 MET . 1 187 MET . 1 188 LYS . 1 189 LEU . 1 190 SER . 1 191 GLU . 1 192 GLU . 1 193 ASN . 1 194 ARG . 1 195 HIS . 1 196 LEU . 1 197 ARG . 1 198 ASP . 1 199 GLU . 1 200 GLY . 1 201 LEU . 1 202 ARG . 1 203 LEU . 1 204 ARG . 1 205 LYS . 1 206 VAL . 1 207 ALA . 1 208 HIS . 1 209 SER . 1 210 ASP . 1 211 LYS . 1 212 PRO . 1 213 GLY . 1 214 SER . 1 215 THR . 1 216 SER . 1 217 ALA . 1 218 VAL . 1 219 SER . 1 220 PHE . 1 221 ARG . 1 222 ASP . 1 223 ASN . 1 224 VAL . 1 225 THR . 1 226 SER . 1 227 PRO . 1 228 LEU . 1 229 PRO . 1 230 SER . 1 231 LEU . 1 232 LEU . 1 233 VAL . 1 234 VAL . 1 235 ILE . 1 236 ALA . 1 237 ALA . 1 238 ILE . 1 239 PHE . 1 240 ILE . 1 241 GLY . 1 242 PHE . 1 243 PHE . 1 244 LEU . 1 245 GLY . 1 246 LYS . 1 247 PHE . 1 248 ILE . 1 249 LEU . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? B . A 1 2 ALA 2 ? ? ? B . A 1 3 SER 3 ? ? ? B . A 1 4 ALA 4 ? ? ? B . A 1 5 SER 5 ? ? ? B . A 1 6 GLY 6 ? ? ? B . A 1 7 ALA 7 ? ? ? B . A 1 8 MET 8 ? ? ? B . A 1 9 ALA 9 ? ? ? B . A 1 10 LYS 10 ? ? ? B . A 1 11 HIS 11 ? ? ? B . A 1 12 GLU 12 ? ? ? B . A 1 13 GLN 13 ? ? ? B . A 1 14 ILE 14 ? ? ? B . A 1 15 LEU 15 ? ? ? B . A 1 16 VAL 16 ? ? ? B . A 1 17 LEU 17 ? ? ? B . A 1 18 ASP 18 ? ? ? B . A 1 19 PRO 19 ? ? ? B . A 1 20 PRO 20 ? ? ? B . A 1 21 SER 21 ? ? ? B . A 1 22 ASP 22 ? ? ? B . A 1 23 LEU 23 ? ? ? B . A 1 24 LYS 24 ? ? ? B . A 1 25 PHE 25 ? ? ? B . A 1 26 LYS 26 ? ? ? B . A 1 27 GLY 27 ? ? ? B . A 1 28 PRO 28 ? ? ? B . A 1 29 PHE 29 ? ? ? B . A 1 30 THR 30 ? ? ? B . A 1 31 ASP 31 ? ? ? B . A 1 32 VAL 32 ? ? ? B . A 1 33 VAL 33 ? ? ? B . A 1 34 THR 34 ? ? ? B . A 1 35 THR 35 ? ? ? B . A 1 36 ASN 36 ? ? ? B . A 1 37 LEU 37 ? ? ? B . A 1 38 LYS 38 ? ? ? B . A 1 39 LEU 39 ? ? ? B . A 1 40 GLN 40 ? ? ? B . A 1 41 ASN 41 ? ? ? B . A 1 42 PRO 42 ? ? ? B . A 1 43 SER 43 ? ? ? B . A 1 44 ASP 44 ? ? ? B . A 1 45 ARG 45 ? ? ? B . A 1 46 LYS 46 ? ? ? B . A 1 47 VAL 47 ? ? ? B . A 1 48 CYS 48 ? ? ? B . A 1 49 PHE 49 ? ? ? B . A 1 50 LYS 50 ? ? ? B . A 1 51 VAL 51 ? ? ? B . A 1 52 LYS 52 ? ? ? B . A 1 53 THR 53 ? ? ? B . A 1 54 THR 54 ? ? ? B . A 1 55 ALA 55 ? ? ? B . A 1 56 PRO 56 ? ? ? B . A 1 57 ARG 57 ? ? ? B . A 1 58 ARG 58 ? ? ? B . A 1 59 TYR 59 ? ? ? B . A 1 60 CYS 60 ? ? ? B . A 1 61 VAL 61 ? ? ? B . A 1 62 ARG 62 ? ? ? B . A 1 63 PRO 63 ? ? ? B . A 1 64 ASN 64 ? ? ? B . A 1 65 SER 65 ? ? ? B . A 1 66 GLY 66 ? ? ? B . A 1 67 ILE 67 ? ? ? B . A 1 68 ILE 68 ? ? ? B . A 1 69 ASP 69 ? ? ? B . A 1 70 PRO 70 ? ? ? B . A 1 71 GLY 71 ? ? ? B . A 1 72 SER 72 ? ? ? B . A 1 73 ILE 73 ? ? ? B . A 1 74 VAL 74 ? ? ? B . A 1 75 THR 75 ? ? ? B . A 1 76 VAL 76 ? ? ? B . A 1 77 SER 77 ? ? ? B . A 1 78 VAL 78 ? ? ? B . A 1 79 MET 79 ? ? ? B . A 1 80 LEU 80 ? ? ? B . A 1 81 GLN 81 ? ? ? B . A 1 82 PRO 82 ? ? ? B . A 1 83 PHE 83 ? ? ? B . A 1 84 ASP 84 ? ? ? B . A 1 85 TYR 85 ? ? ? B . A 1 86 ASP 86 ? ? ? B . A 1 87 PRO 87 ? ? ? B . A 1 88 ASN 88 ? ? ? B . A 1 89 GLU 89 ? ? ? B . A 1 90 LYS 90 ? ? ? B . A 1 91 SER 91 ? ? ? B . A 1 92 LYS 92 ? ? ? B . A 1 93 HIS 93 ? ? ? B . A 1 94 LYS 94 ? ? ? B . A 1 95 PHE 95 ? ? ? B . A 1 96 MET 96 ? ? ? B . A 1 97 VAL 97 ? ? ? B . A 1 98 GLN 98 ? ? ? B . A 1 99 THR 99 ? ? ? B . A 1 100 ILE 100 ? ? ? B . A 1 101 PHE 101 ? ? ? B . A 1 102 ALA 102 ? ? ? B . A 1 103 PRO 103 ? ? ? B . A 1 104 PRO 104 ? ? ? B . A 1 105 ASN 105 ? ? ? B . A 1 106 ILE 106 ? ? ? B . A 1 107 SER 107 ? ? ? B . A 1 108 ASP 108 ? ? ? B . A 1 109 MET 109 ? ? ? B . A 1 110 GLU 110 ? ? ? B . A 1 111 ALA 111 ? ? ? B . A 1 112 VAL 112 ? ? ? B . A 1 113 TRP 113 ? ? ? B . A 1 114 LYS 114 ? ? ? B . A 1 115 GLU 115 ? ? ? B . A 1 116 ALA 116 ? ? ? B . A 1 117 LYS 117 ? ? ? B . A 1 118 PRO 118 ? ? ? B . A 1 119 ASP 119 ? ? ? B . A 1 120 GLU 120 ? ? ? B . A 1 121 LEU 121 ? ? ? B . A 1 122 MET 122 ? ? ? B . A 1 123 ASP 123 ? ? ? B . A 1 124 SER 124 ? ? ? B . A 1 125 LYS 125 ? ? ? B . A 1 126 LEU 126 ? ? ? B . A 1 127 ARG 127 ? ? ? B . A 1 128 CYS 128 ? ? ? B . A 1 129 VAL 129 ? ? ? B . A 1 130 PHE 130 ? ? ? B . A 1 131 GLU 131 ? ? ? B . A 1 132 MET 132 ? ? ? B . A 1 133 PRO 133 ? ? ? B . A 1 134 ASN 134 ? ? ? B . A 1 135 GLU 135 ? ? ? B . A 1 136 ASN 136 ? ? ? B . A 1 137 ASP 137 ? ? ? B . A 1 138 LYS 138 ? ? ? B . A 1 139 LEU 139 ? ? ? B . A 1 140 ASN 140 ? ? ? B . A 1 141 ASP 141 ? ? ? B . A 1 142 MET 142 ? ? ? B . A 1 143 GLU 143 ? ? ? B . A 1 144 PRO 144 ? ? ? B . A 1 145 SER 145 ? ? ? B . A 1 146 LYS 146 ? ? ? B . A 1 147 ALA 147 ? ? ? B . A 1 148 VAL 148 ? ? ? B . A 1 149 PRO 149 ? ? ? B . A 1 150 LEU 150 ? ? ? B . A 1 151 ASN 151 ? ? ? B . A 1 152 ALA 152 ? ? ? B . A 1 153 SER 153 ? ? ? B . A 1 154 LYS 154 ? ? ? B . A 1 155 GLN 155 ? ? ? B . A 1 156 ASP 156 ? ? ? B . A 1 157 GLY 157 ? ? ? B . A 1 158 PRO 158 ? ? ? B . A 1 159 LEU 159 ? ? ? B . A 1 160 PRO 160 ? ? ? B . A 1 161 LYS 161 ? ? ? B . A 1 162 PRO 162 ? ? ? B . A 1 163 HIS 163 ? ? ? B . A 1 164 SER 164 ? ? ? B . A 1 165 VAL 165 ? ? ? B . A 1 166 SER 166 ? ? ? B . A 1 167 LEU 167 ? ? ? B . A 1 168 ASN 168 ? ? ? B . A 1 169 ASP 169 ? ? ? B . A 1 170 THR 170 ? ? ? B . A 1 171 GLU 171 ? ? ? B . A 1 172 THR 172 ? ? ? B . A 1 173 ARG 173 ? ? ? B . A 1 174 LYS 174 ? ? ? B . A 1 175 LEU 175 ? ? ? B . A 1 176 MET 176 ? ? ? B . A 1 177 GLU 177 ? ? ? B . A 1 178 GLU 178 178 GLU GLU B . A 1 179 CYS 179 179 CYS CYS B . A 1 180 LYS 180 180 LYS LYS B . A 1 181 ARG 181 181 ARG ARG B . A 1 182 LEU 182 182 LEU LEU B . A 1 183 GLN 183 183 GLN GLN B . A 1 184 GLY 184 184 GLY GLY B . A 1 185 GLU 185 185 GLU GLU B . A 1 186 MET 186 186 MET MET B . A 1 187 MET 187 187 MET MET B . A 1 188 LYS 188 188 LYS LYS B . A 1 189 LEU 189 189 LEU LEU B . A 1 190 SER 190 190 SER SER B . A 1 191 GLU 191 191 GLU GLU B . A 1 192 GLU 192 192 GLU GLU B . A 1 193 ASN 193 193 ASN ASN B . A 1 194 ARG 194 194 ARG ARG B . A 1 195 HIS 195 195 HIS HIS B . A 1 196 LEU 196 196 LEU LEU B . A 1 197 ARG 197 197 ARG ARG B . A 1 198 ASP 198 198 ASP ASP B . A 1 199 GLU 199 199 GLU GLU B . A 1 200 GLY 200 200 GLY GLY B . A 1 201 LEU 201 201 LEU LEU B . A 1 202 ARG 202 202 ARG ARG B . A 1 203 LEU 203 203 LEU LEU B . A 1 204 ARG 204 204 ARG ARG B . A 1 205 LYS 205 205 LYS LYS B . A 1 206 VAL 206 206 VAL VAL B . A 1 207 ALA 207 207 ALA ALA B . A 1 208 HIS 208 208 HIS HIS B . A 1 209 SER 209 ? ? ? B . A 1 210 ASP 210 ? ? ? B . A 1 211 LYS 211 ? ? ? B . A 1 212 PRO 212 ? ? ? B . A 1 213 GLY 213 ? ? ? B . A 1 214 SER 214 ? ? ? B . A 1 215 THR 215 ? ? ? B . A 1 216 SER 216 ? ? ? B . A 1 217 ALA 217 ? ? ? B . A 1 218 VAL 218 ? ? ? B . A 1 219 SER 219 ? ? ? B . A 1 220 PHE 220 ? ? ? B . A 1 221 ARG 221 ? ? ? B . A 1 222 ASP 222 ? ? ? B . A 1 223 ASN 223 ? ? ? B . A 1 224 VAL 224 ? ? ? B . A 1 225 THR 225 ? ? ? B . A 1 226 SER 226 ? ? ? B . A 1 227 PRO 227 ? ? ? B . A 1 228 LEU 228 ? ? ? B . A 1 229 PRO 229 ? ? ? B . A 1 230 SER 230 ? ? ? B . A 1 231 LEU 231 ? ? ? B . A 1 232 LEU 232 ? ? ? B . A 1 233 VAL 233 ? ? ? B . A 1 234 VAL 234 ? ? ? B . A 1 235 ILE 235 ? ? ? B . A 1 236 ALA 236 ? ? ? B . A 1 237 ALA 237 ? ? ? B . A 1 238 ILE 238 ? ? ? B . A 1 239 PHE 239 ? ? ? B . A 1 240 ILE 240 ? ? ? B . A 1 241 GLY 241 ? ? ? B . A 1 242 PHE 242 ? ? ? B . A 1 243 PHE 243 ? ? ? B . A 1 244 LEU 244 ? ? ? B . A 1 245 GLY 245 ? ? ? B . A 1 246 LYS 246 ? ? ? B . A 1 247 PHE 247 ? ? ? B . A 1 248 ILE 248 ? ? ? B . A 1 249 LEU 249 ? ? ? B . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'BONE MARROW STROMAL ANTIGEN 2 {PDB ID=2xg7, label_asym_id=B, auth_asym_id=C, SMTL ID=2xg7.1.B}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 2xg7, label_asym_id=B' 'target-template alignment' . 4 'model 3' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-07 6 PDB https://www.wwpdb.org . 2024-11-01 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A B 1 1 C # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;EACRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEI TTLNHKLQDASAEVERLRRENQVLSVRIADKGT ; ;EACRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEI TTLNHKLQDASAEVERLRRENQVLSVRIADKGT ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 62 92 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 2xg7 2024-10-09 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 249 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 249 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 13.000 25.806 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MASASGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL 2 1 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVEELEGEITTLNHKLQDASAEVERLRRENQ----------------------------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.076}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 2xg7.1, oligomeric state (monomer) as predicted' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 3' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . GLU 178 178 ? A -7.762 -29.578 43.409 1 1 B GLU 0.660 1 ATOM 2 C CA . GLU 178 178 ? A -8.537 -28.309 43.270 1 1 B GLU 0.660 1 ATOM 3 C C . GLU 178 178 ? A -7.715 -27.109 42.863 1 1 B GLU 0.660 1 ATOM 4 O O . GLU 178 178 ? A -7.941 -26.547 41.805 1 1 B GLU 0.660 1 ATOM 5 C CB . GLU 178 178 ? A -9.278 -27.995 44.571 1 1 B GLU 0.660 1 ATOM 6 C CG . GLU 178 178 ? A -10.151 -26.745 44.358 1 1 B GLU 0.660 1 ATOM 7 C CD . GLU 178 178 ? A -11.108 -26.432 45.496 1 1 B GLU 0.660 1 ATOM 8 O OE1 . GLU 178 178 ? A -10.787 -26.767 46.655 1 1 B GLU 0.660 1 ATOM 9 O OE2 . GLU 178 178 ? A -12.184 -25.897 45.123 1 1 B GLU 0.660 1 ATOM 10 N N . CYS 179 179 ? A -6.684 -26.734 43.652 1 1 B CYS 0.730 1 ATOM 11 C CA . CYS 179 179 ? A -5.772 -25.642 43.340 1 1 B CYS 0.730 1 ATOM 12 C C . CYS 179 179 ? A -5.189 -25.703 41.927 1 1 B CYS 0.730 1 ATOM 13 O O . CYS 179 179 ? A -5.188 -24.717 41.218 1 1 B CYS 0.730 1 ATOM 14 C CB . CYS 179 179 ? A -4.645 -25.632 44.402 1 1 B CYS 0.730 1 ATOM 15 S SG . CYS 179 179 ? A -5.306 -25.408 46.087 1 1 B CYS 0.730 1 ATOM 16 N N . LYS 180 180 ? A -4.792 -26.905 41.449 1 1 B LYS 0.550 1 ATOM 17 C CA . LYS 180 180 ? A -4.370 -27.143 40.071 1 1 B LYS 0.550 1 ATOM 18 C C . LYS 180 180 ? A -5.388 -26.820 38.995 1 1 B LYS 0.550 1 ATOM 19 O O . LYS 180 180 ? A -5.045 -26.297 37.941 1 1 B LYS 0.550 1 ATOM 20 C CB . LYS 180 180 ? A -3.980 -28.622 39.880 1 1 B LYS 0.550 1 ATOM 21 C CG . LYS 180 180 ? A -2.740 -29.005 40.689 1 1 B LYS 0.550 1 ATOM 22 C CD . LYS 180 180 ? A -2.322 -30.461 40.439 1 1 B LYS 0.550 1 ATOM 23 C CE . LYS 180 180 ? A -1.053 -30.843 41.204 1 1 B LYS 0.550 1 ATOM 24 N NZ . LYS 180 180 ? A -0.718 -32.264 40.967 1 1 B LYS 0.550 1 ATOM 25 N N . ARG 181 181 ? A -6.682 -27.125 39.238 1 1 B ARG 0.550 1 ATOM 26 C CA . ARG 181 181 ? A -7.749 -26.740 38.338 1 1 B ARG 0.550 1 ATOM 27 C C . ARG 181 181 ? A -7.830 -25.225 38.255 1 1 B ARG 0.550 1 ATOM 28 O O . ARG 181 181 ? A -7.756 -24.658 37.176 1 1 B ARG 0.550 1 ATOM 29 C CB . ARG 181 181 ? A -9.107 -27.296 38.852 1 1 B ARG 0.550 1 ATOM 30 C CG . ARG 181 181 ? A -10.305 -26.998 37.928 1 1 B ARG 0.550 1 ATOM 31 C CD . ARG 181 181 ? A -11.714 -27.154 38.530 1 1 B ARG 0.550 1 ATOM 32 N NE . ARG 181 181 ? A -11.868 -26.166 39.659 1 1 B ARG 0.550 1 ATOM 33 C CZ . ARG 181 181 ? A -11.947 -26.457 40.966 1 1 B ARG 0.550 1 ATOM 34 N NH1 . ARG 181 181 ? A -11.773 -27.714 41.386 1 1 B ARG 0.550 1 ATOM 35 N NH2 . ARG 181 181 ? A -12.223 -25.539 41.891 1 1 B ARG 0.550 1 ATOM 36 N N . LEU 182 182 ? A -7.861 -24.540 39.420 1 1 B LEU 0.570 1 ATOM 37 C CA . LEU 182 182 ? A -7.930 -23.092 39.492 1 1 B LEU 0.570 1 ATOM 38 C C . LEU 182 182 ? A -6.744 -22.410 38.840 1 1 B LEU 0.570 1 ATOM 39 O O . LEU 182 182 ? A -6.906 -21.471 38.070 1 1 B LEU 0.570 1 ATOM 40 C CB . LEU 182 182 ? A -8.120 -22.602 40.951 1 1 B LEU 0.570 1 ATOM 41 C CG . LEU 182 182 ? A -9.396 -23.135 41.631 1 1 B LEU 0.570 1 ATOM 42 C CD1 . LEU 182 182 ? A -9.634 -22.465 42.991 1 1 B LEU 0.570 1 ATOM 43 C CD2 . LEU 182 182 ? A -10.613 -22.914 40.724 1 1 B LEU 0.570 1 ATOM 44 N N . GLN 183 183 ? A -5.517 -22.926 39.045 1 1 B GLN 0.550 1 ATOM 45 C CA . GLN 183 183 ? A -4.345 -22.475 38.319 1 1 B GLN 0.550 1 ATOM 46 C C . GLN 183 183 ? A -4.520 -22.558 36.807 1 1 B GLN 0.550 1 ATOM 47 O O . GLN 183 183 ? A -4.274 -21.583 36.104 1 1 B GLN 0.550 1 ATOM 48 C CB . GLN 183 183 ? A -3.117 -23.328 38.721 1 1 B GLN 0.550 1 ATOM 49 C CG . GLN 183 183 ? A -2.626 -23.079 40.165 1 1 B GLN 0.550 1 ATOM 50 C CD . GLN 183 183 ? A -1.568 -24.104 40.583 1 1 B GLN 0.550 1 ATOM 51 O OE1 . GLN 183 183 ? A -1.511 -25.240 40.125 1 1 B GLN 0.550 1 ATOM 52 N NE2 . GLN 183 183 ? A -0.694 -23.690 41.533 1 1 B GLN 0.550 1 ATOM 53 N N . GLY 184 184 ? A -5.036 -23.684 36.275 1 1 B GLY 0.600 1 ATOM 54 C CA . GLY 184 184 ? A -5.291 -23.832 34.846 1 1 B GLY 0.600 1 ATOM 55 C C . GLY 184 184 ? A -6.376 -22.931 34.292 1 1 B GLY 0.600 1 ATOM 56 O O . GLY 184 184 ? A -6.260 -22.430 33.172 1 1 B GLY 0.600 1 ATOM 57 N N . GLU 185 185 ? A -7.451 -22.670 35.070 1 1 B GLU 0.580 1 ATOM 58 C CA . GLU 185 185 ? A -8.484 -21.711 34.713 1 1 B GLU 0.580 1 ATOM 59 C C . GLU 185 185 ? A -7.905 -20.292 34.631 1 1 B GLU 0.580 1 ATOM 60 O O . GLU 185 185 ? A -8.111 -19.588 33.653 1 1 B GLU 0.580 1 ATOM 61 C CB . GLU 185 185 ? A -9.712 -21.760 35.670 1 1 B GLU 0.580 1 ATOM 62 C CG . GLU 185 185 ? A -10.412 -23.144 35.776 1 1 B GLU 0.580 1 ATOM 63 C CD . GLU 185 185 ? A -11.607 -23.132 36.740 1 1 B GLU 0.580 1 ATOM 64 O OE1 . GLU 185 185 ? A -12.376 -22.141 36.689 1 1 B GLU 0.580 1 ATOM 65 O OE2 . GLU 185 185 ? A -11.765 -24.105 37.533 1 1 B GLU 0.580 1 ATOM 66 N N . MET 186 186 ? A -7.076 -19.882 35.625 1 1 B MET 0.560 1 ATOM 67 C CA . MET 186 186 ? A -6.343 -18.620 35.643 1 1 B MET 0.560 1 ATOM 68 C C . MET 186 186 ? A -5.399 -18.455 34.448 1 1 B MET 0.560 1 ATOM 69 O O . MET 186 186 ? A -5.285 -17.370 33.880 1 1 B MET 0.560 1 ATOM 70 C CB . MET 186 186 ? A -5.543 -18.435 36.969 1 1 B MET 0.560 1 ATOM 71 C CG . MET 186 186 ? A -6.400 -18.289 38.249 1 1 B MET 0.560 1 ATOM 72 S SD . MET 186 186 ? A -7.680 -16.999 38.214 1 1 B MET 0.560 1 ATOM 73 C CE . MET 186 186 ? A -6.525 -15.603 38.206 1 1 B MET 0.560 1 ATOM 74 N N . MET 187 187 ? A -4.702 -19.528 34.023 1 1 B MET 0.570 1 ATOM 75 C CA . MET 187 187 ? A -3.844 -19.518 32.848 1 1 B MET 0.570 1 ATOM 76 C C . MET 187 187 ? A -4.574 -19.311 31.531 1 1 B MET 0.570 1 ATOM 77 O O . MET 187 187 ? A -4.174 -18.491 30.708 1 1 B MET 0.570 1 ATOM 78 C CB . MET 187 187 ? A -3.074 -20.848 32.720 1 1 B MET 0.570 1 ATOM 79 C CG . MET 187 187 ? A -2.056 -21.103 33.841 1 1 B MET 0.570 1 ATOM 80 S SD . MET 187 187 ? A -1.353 -22.777 33.796 1 1 B MET 0.570 1 ATOM 81 C CE . MET 187 187 ? A -0.336 -22.477 32.324 1 1 B MET 0.570 1 ATOM 82 N N . LYS 188 188 ? A -5.686 -20.036 31.304 1 1 B LYS 0.590 1 ATOM 83 C CA . LYS 188 188 ? A -6.523 -19.826 30.138 1 1 B LYS 0.590 1 ATOM 84 C C . LYS 188 188 ? A -7.208 -18.459 30.135 1 1 B LYS 0.590 1 ATOM 85 O O . LYS 188 188 ? A -7.224 -17.768 29.120 1 1 B LYS 0.590 1 ATOM 86 C CB . LYS 188 188 ? A -7.545 -20.966 29.969 1 1 B LYS 0.590 1 ATOM 87 C CG . LYS 188 188 ? A -8.356 -20.823 28.676 1 1 B LYS 0.590 1 ATOM 88 C CD . LYS 188 188 ? A -9.361 -21.958 28.483 1 1 B LYS 0.590 1 ATOM 89 C CE . LYS 188 188 ? A -10.206 -21.742 27.230 1 1 B LYS 0.590 1 ATOM 90 N NZ . LYS 188 188 ? A -11.174 -22.841 27.093 1 1 B LYS 0.590 1 ATOM 91 N N . LEU 189 189 ? A -7.713 -18.004 31.303 1 1 B LEU 0.590 1 ATOM 92 C CA . LEU 189 189 ? A -8.241 -16.661 31.514 1 1 B LEU 0.590 1 ATOM 93 C C . LEU 189 189 ? A -7.243 -15.565 31.147 1 1 B LEU 0.590 1 ATOM 94 O O . LEU 189 189 ? A -7.557 -14.577 30.491 1 1 B LEU 0.590 1 ATOM 95 C CB . LEU 189 189 ? A -8.559 -16.482 33.026 1 1 B LEU 0.590 1 ATOM 96 C CG . LEU 189 189 ? A -10.025 -16.682 33.440 1 1 B LEU 0.590 1 ATOM 97 C CD1 . LEU 189 189 ? A -10.141 -16.824 34.969 1 1 B LEU 0.590 1 ATOM 98 C CD2 . LEU 189 189 ? A -10.837 -15.481 32.940 1 1 B LEU 0.590 1 ATOM 99 N N . SER 190 190 ? A -5.980 -15.746 31.570 1 1 B SER 0.600 1 ATOM 100 C CA . SER 190 190 ? A -4.869 -14.876 31.220 1 1 B SER 0.600 1 ATOM 101 C C . SER 190 190 ? A -4.561 -14.836 29.723 1 1 B SER 0.600 1 ATOM 102 O O . SER 190 190 ? A -4.366 -13.764 29.167 1 1 B SER 0.600 1 ATOM 103 C CB . SER 190 190 ? A -3.579 -15.255 31.983 1 1 B SER 0.600 1 ATOM 104 O OG . SER 190 190 ? A -2.522 -14.305 31.811 1 1 B SER 0.600 1 ATOM 105 N N . GLU 191 191 ? A -4.570 -15.988 29.005 1 1 B GLU 0.610 1 ATOM 106 C CA . GLU 191 191 ? A -4.374 -16.009 27.552 1 1 B GLU 0.610 1 ATOM 107 C C . GLU 191 191 ? A -5.490 -15.300 26.784 1 1 B GLU 0.610 1 ATOM 108 O O . GLU 191 191 ? A -5.243 -14.509 25.875 1 1 B GLU 0.610 1 ATOM 109 C CB . GLU 191 191 ? A -4.133 -17.437 26.992 1 1 B GLU 0.610 1 ATOM 110 C CG . GLU 191 191 ? A -3.835 -17.544 25.455 1 1 B GLU 0.610 1 ATOM 111 C CD . GLU 191 191 ? A -2.672 -16.733 24.863 1 1 B GLU 0.610 1 ATOM 112 O OE1 . GLU 191 191 ? A -1.910 -16.068 25.605 1 1 B GLU 0.610 1 ATOM 113 O OE2 . GLU 191 191 ? A -2.535 -16.738 23.609 1 1 B GLU 0.610 1 ATOM 114 N N . GLU 192 192 ? A -6.769 -15.497 27.178 1 1 B GLU 0.610 1 ATOM 115 C CA . GLU 192 192 ? A -7.902 -14.760 26.636 1 1 B GLU 0.610 1 ATOM 116 C C . GLU 192 192 ? A -7.790 -13.244 26.872 1 1 B GLU 0.610 1 ATOM 117 O O . GLU 192 192 ? A -8.047 -12.434 25.983 1 1 B GLU 0.610 1 ATOM 118 C CB . GLU 192 192 ? A -9.224 -15.367 27.175 1 1 B GLU 0.610 1 ATOM 119 C CG . GLU 192 192 ? A -9.450 -16.818 26.660 1 1 B GLU 0.610 1 ATOM 120 C CD . GLU 192 192 ? A -10.715 -17.520 27.167 1 1 B GLU 0.610 1 ATOM 121 O OE1 . GLU 192 192 ? A -11.467 -16.945 27.989 1 1 B GLU 0.610 1 ATOM 122 O OE2 . GLU 192 192 ? A -10.920 -18.683 26.720 1 1 B GLU 0.610 1 ATOM 123 N N . ASN 193 193 ? A -7.313 -12.823 28.064 1 1 B ASN 0.610 1 ATOM 124 C CA . ASN 193 193 ? A -6.994 -11.435 28.383 1 1 B ASN 0.610 1 ATOM 125 C C . ASN 193 193 ? A -5.821 -10.856 27.593 1 1 B ASN 0.610 1 ATOM 126 O O . ASN 193 193 ? A -5.797 -9.664 27.284 1 1 B ASN 0.610 1 ATOM 127 C CB . ASN 193 193 ? A -6.697 -11.230 29.888 1 1 B ASN 0.610 1 ATOM 128 C CG . ASN 193 193 ? A -7.981 -11.383 30.697 1 1 B ASN 0.610 1 ATOM 129 O OD1 . ASN 193 193 ? A -9.082 -11.121 30.231 1 1 B ASN 0.610 1 ATOM 130 N ND2 . ASN 193 193 ? A -7.830 -11.745 31.995 1 1 B ASN 0.610 1 ATOM 131 N N . ARG 194 194 ? A -4.799 -11.677 27.268 1 1 B ARG 0.570 1 ATOM 132 C CA . ARG 194 194 ? A -3.733 -11.289 26.358 1 1 B ARG 0.570 1 ATOM 133 C C . ARG 194 194 ? A -4.256 -11.026 24.954 1 1 B ARG 0.570 1 ATOM 134 O O . ARG 194 194 ? A -4.075 -9.936 24.419 1 1 B ARG 0.570 1 ATOM 135 C CB . ARG 194 194 ? A -2.612 -12.355 26.302 1 1 B ARG 0.570 1 ATOM 136 C CG . ARG 194 194 ? A -1.400 -11.921 25.450 1 1 B ARG 0.570 1 ATOM 137 C CD . ARG 194 194 ? A -0.287 -12.966 25.375 1 1 B ARG 0.570 1 ATOM 138 N NE . ARG 194 194 ? A -0.740 -14.012 24.418 1 1 B ARG 0.570 1 ATOM 139 C CZ . ARG 194 194 ? A -0.594 -13.958 23.090 1 1 B ARG 0.570 1 ATOM 140 N NH1 . ARG 194 194 ? A -0.089 -12.872 22.490 1 1 B ARG 0.570 1 ATOM 141 N NH2 . ARG 194 194 ? A -0.997 -14.988 22.349 1 1 B ARG 0.570 1 ATOM 142 N N . HIS 195 195 ? A -5.049 -11.972 24.395 1 1 B HIS 0.580 1 ATOM 143 C CA . HIS 195 195 ? A -5.716 -11.845 23.103 1 1 B HIS 0.580 1 ATOM 144 C C . HIS 195 195 ? A -6.568 -10.578 23.014 1 1 B HIS 0.580 1 ATOM 145 O O . HIS 195 195 ? A -6.560 -9.847 22.031 1 1 B HIS 0.580 1 ATOM 146 C CB . HIS 195 195 ? A -6.632 -13.080 22.873 1 1 B HIS 0.580 1 ATOM 147 C CG . HIS 195 195 ? A -7.422 -13.052 21.602 1 1 B HIS 0.580 1 ATOM 148 N ND1 . HIS 195 195 ? A -6.784 -13.343 20.413 1 1 B HIS 0.580 1 ATOM 149 C CD2 . HIS 195 195 ? A -8.697 -12.650 21.365 1 1 B HIS 0.580 1 ATOM 150 C CE1 . HIS 195 195 ? A -7.677 -13.106 19.479 1 1 B HIS 0.580 1 ATOM 151 N NE2 . HIS 195 195 ? A -8.860 -12.686 19.996 1 1 B HIS 0.580 1 ATOM 152 N N . LEU 196 196 ? A -7.308 -10.280 24.098 1 1 B LEU 0.570 1 ATOM 153 C CA . LEU 196 196 ? A -8.076 -9.062 24.231 1 1 B LEU 0.570 1 ATOM 154 C C . LEU 196 196 ? A -7.288 -7.746 24.225 1 1 B LEU 0.570 1 ATOM 155 O O . LEU 196 196 ? A -7.619 -6.805 23.517 1 1 B LEU 0.570 1 ATOM 156 C CB . LEU 196 196 ? A -8.820 -9.097 25.581 1 1 B LEU 0.570 1 ATOM 157 C CG . LEU 196 196 ? A -9.674 -7.849 25.878 1 1 B LEU 0.570 1 ATOM 158 C CD1 . LEU 196 196 ? A -10.767 -7.671 24.814 1 1 B LEU 0.570 1 ATOM 159 C CD2 . LEU 196 196 ? A -10.241 -7.906 27.300 1 1 B LEU 0.570 1 ATOM 160 N N . ARG 197 197 ? A -6.222 -7.636 25.049 1 1 B ARG 0.550 1 ATOM 161 C CA . ARG 197 197 ? A -5.400 -6.440 25.119 1 1 B ARG 0.550 1 ATOM 162 C C . ARG 197 197 ? A -4.621 -6.203 23.834 1 1 B ARG 0.550 1 ATOM 163 O O . ARG 197 197 ? A -4.517 -5.062 23.383 1 1 B ARG 0.550 1 ATOM 164 C CB . ARG 197 197 ? A -4.435 -6.463 26.326 1 1 B ARG 0.550 1 ATOM 165 C CG . ARG 197 197 ? A -5.109 -6.304 27.707 1 1 B ARG 0.550 1 ATOM 166 C CD . ARG 197 197 ? A -4.070 -6.390 28.828 1 1 B ARG 0.550 1 ATOM 167 N NE . ARG 197 197 ? A -4.774 -6.214 30.143 1 1 B ARG 0.550 1 ATOM 168 C CZ . ARG 197 197 ? A -4.172 -6.381 31.329 1 1 B ARG 0.550 1 ATOM 169 N NH1 . ARG 197 197 ? A -2.887 -6.717 31.403 1 1 B ARG 0.550 1 ATOM 170 N NH2 . ARG 197 197 ? A -4.853 -6.210 32.460 1 1 B ARG 0.550 1 ATOM 171 N N . ASP 198 198 ? A -4.100 -7.280 23.206 1 1 B ASP 0.650 1 ATOM 172 C CA . ASP 198 198 ? A -3.416 -7.258 21.924 1 1 B ASP 0.650 1 ATOM 173 C C . ASP 198 198 ? A -4.315 -6.690 20.818 1 1 B ASP 0.650 1 ATOM 174 O O . ASP 198 198 ? A -3.913 -5.785 20.080 1 1 B ASP 0.650 1 ATOM 175 C CB . ASP 198 198 ? A -2.936 -8.701 21.557 1 1 B ASP 0.650 1 ATOM 176 C CG . ASP 198 198 ? A -1.754 -9.199 22.400 1 1 B ASP 0.650 1 ATOM 177 O OD1 . ASP 198 198 ? A -1.218 -8.411 23.217 1 1 B ASP 0.650 1 ATOM 178 O OD2 . ASP 198 198 ? A -1.352 -10.385 22.219 1 1 B ASP 0.650 1 ATOM 179 N N . GLU 199 199 ? A -5.596 -7.133 20.748 1 1 B GLU 0.660 1 ATOM 180 C CA . GLU 199 199 ? A -6.603 -6.589 19.844 1 1 B GLU 0.660 1 ATOM 181 C C . GLU 199 199 ? A -6.888 -5.115 20.118 1 1 B GLU 0.660 1 ATOM 182 O O . GLU 199 199 ? A -6.969 -4.276 19.223 1 1 B GLU 0.660 1 ATOM 183 C CB . GLU 199 199 ? A -7.928 -7.394 19.910 1 1 B GLU 0.660 1 ATOM 184 C CG . GLU 199 199 ? A -8.934 -7.096 18.773 1 1 B GLU 0.660 1 ATOM 185 C CD . GLU 199 199 ? A -8.514 -7.480 17.364 1 1 B GLU 0.660 1 ATOM 186 O OE1 . GLU 199 199 ? A -7.322 -7.716 17.064 1 1 B GLU 0.660 1 ATOM 187 O OE2 . GLU 199 199 ? A -9.433 -7.446 16.508 1 1 B GLU 0.660 1 ATOM 188 N N . GLY 200 200 ? A -6.980 -4.746 21.413 1 1 B GLY 0.690 1 ATOM 189 C CA . GLY 200 200 ? A -7.224 -3.374 21.840 1 1 B GLY 0.690 1 ATOM 190 C C . GLY 200 200 ? A -6.112 -2.389 21.529 1 1 B GLY 0.690 1 ATOM 191 O O . GLY 200 200 ? A -6.367 -1.283 21.056 1 1 B GLY 0.690 1 ATOM 192 N N . LEU 201 201 ? A -4.836 -2.755 21.762 1 1 B LEU 0.620 1 ATOM 193 C CA . LEU 201 201 ? A -3.670 -1.972 21.368 1 1 B LEU 0.620 1 ATOM 194 C C . LEU 201 201 ? A -3.504 -1.851 19.869 1 1 B LEU 0.620 1 ATOM 195 O O . LEU 201 201 ? A -3.125 -0.802 19.357 1 1 B LEU 0.620 1 ATOM 196 C CB . LEU 201 201 ? A -2.352 -2.549 21.923 1 1 B LEU 0.620 1 ATOM 197 C CG . LEU 201 201 ? A -2.205 -2.481 23.452 1 1 B LEU 0.620 1 ATOM 198 C CD1 . LEU 201 201 ? A -0.953 -3.260 23.880 1 1 B LEU 0.620 1 ATOM 199 C CD2 . LEU 201 201 ? A -2.151 -1.036 23.972 1 1 B LEU 0.620 1 ATOM 200 N N . ARG 202 202 ? A -3.787 -2.932 19.124 1 1 B ARG 0.550 1 ATOM 201 C CA . ARG 202 202 ? A -3.829 -2.918 17.678 1 1 B ARG 0.550 1 ATOM 202 C C . ARG 202 202 ? A -4.839 -1.929 17.099 1 1 B ARG 0.550 1 ATOM 203 O O . ARG 202 202 ? A -4.506 -1.128 16.231 1 1 B ARG 0.550 1 ATOM 204 C CB . ARG 202 202 ? A -4.195 -4.344 17.217 1 1 B ARG 0.550 1 ATOM 205 C CG . ARG 202 202 ? A -4.188 -4.583 15.699 1 1 B ARG 0.550 1 ATOM 206 C CD . ARG 202 202 ? A -4.610 -6.012 15.318 1 1 B ARG 0.550 1 ATOM 207 N NE . ARG 202 202 ? A -6.094 -6.137 15.443 1 1 B ARG 0.550 1 ATOM 208 C CZ . ARG 202 202 ? A -7.000 -5.713 14.557 1 1 B ARG 0.550 1 ATOM 209 N NH1 . ARG 202 202 ? A -6.642 -5.019 13.485 1 1 B ARG 0.550 1 ATOM 210 N NH2 . ARG 202 202 ? A -8.284 -5.998 14.684 1 1 B ARG 0.550 1 ATOM 211 N N . LEU 203 203 ? A -6.087 -1.915 17.610 1 1 B LEU 0.580 1 ATOM 212 C CA . LEU 203 203 ? A -7.117 -0.972 17.200 1 1 B LEU 0.580 1 ATOM 213 C C . LEU 203 203 ? A -6.810 0.466 17.536 1 1 B LEU 0.580 1 ATOM 214 O O . LEU 203 203 ? A -7.045 1.363 16.732 1 1 B LEU 0.580 1 ATOM 215 C CB . LEU 203 203 ? A -8.476 -1.321 17.825 1 1 B LEU 0.580 1 ATOM 216 C CG . LEU 203 203 ? A -9.078 -2.629 17.295 1 1 B LEU 0.580 1 ATOM 217 C CD1 . LEU 203 203 ? A -10.279 -3.010 18.169 1 1 B LEU 0.580 1 ATOM 218 C CD2 . LEU 203 203 ? A -9.454 -2.538 15.807 1 1 B LEU 0.580 1 ATOM 219 N N . ARG 204 204 ? A -6.232 0.722 18.724 1 1 B ARG 0.540 1 ATOM 220 C CA . ARG 204 204 ? A -5.759 2.041 19.094 1 1 B ARG 0.540 1 ATOM 221 C C . ARG 204 204 ? A -4.728 2.608 18.126 1 1 B ARG 0.540 1 ATOM 222 O O . ARG 204 204 ? A -4.764 3.781 17.788 1 1 B ARG 0.540 1 ATOM 223 C CB . ARG 204 204 ? A -5.100 2.022 20.493 1 1 B ARG 0.540 1 ATOM 224 C CG . ARG 204 204 ? A -6.082 1.996 21.678 1 1 B ARG 0.540 1 ATOM 225 C CD . ARG 204 204 ? A -5.404 2.484 22.962 1 1 B ARG 0.540 1 ATOM 226 N NE . ARG 204 204 ? A -6.458 3.114 23.824 1 1 B ARG 0.540 1 ATOM 227 C CZ . ARG 204 204 ? A -7.140 2.506 24.803 1 1 B ARG 0.540 1 ATOM 228 N NH1 . ARG 204 204 ? A -6.918 1.239 25.130 1 1 B ARG 0.540 1 ATOM 229 N NH2 . ARG 204 204 ? A -8.073 3.190 25.466 1 1 B ARG 0.540 1 ATOM 230 N N . LYS 205 205 ? A -3.788 1.766 17.664 1 1 B LYS 0.570 1 ATOM 231 C CA . LYS 205 205 ? A -2.831 2.128 16.640 1 1 B LYS 0.570 1 ATOM 232 C C . LYS 205 205 ? A -3.400 2.371 15.249 1 1 B LYS 0.570 1 ATOM 233 O O . LYS 205 205 ? A -2.963 3.284 14.568 1 1 B LYS 0.570 1 ATOM 234 C CB . LYS 205 205 ? A -1.772 1.023 16.504 1 1 B LYS 0.570 1 ATOM 235 C CG . LYS 205 205 ? A -0.870 0.905 17.734 1 1 B LYS 0.570 1 ATOM 236 C CD . LYS 205 205 ? A 0.131 -0.246 17.582 1 1 B LYS 0.570 1 ATOM 237 C CE . LYS 205 205 ? A 1.018 -0.405 18.815 1 1 B LYS 0.570 1 ATOM 238 N NZ . LYS 205 205 ? A 1.960 -1.528 18.623 1 1 B LYS 0.570 1 ATOM 239 N N . VAL 206 206 ? A -4.345 1.526 14.783 1 1 B VAL 0.540 1 ATOM 240 C CA . VAL 206 206 ? A -5.011 1.683 13.489 1 1 B VAL 0.540 1 ATOM 241 C C . VAL 206 206 ? A -5.943 2.897 13.435 1 1 B VAL 0.540 1 ATOM 242 O O . VAL 206 206 ? A -6.093 3.534 12.399 1 1 B VAL 0.540 1 ATOM 243 C CB . VAL 206 206 ? A -5.761 0.407 13.081 1 1 B VAL 0.540 1 ATOM 244 C CG1 . VAL 206 206 ? A -6.504 0.568 11.737 1 1 B VAL 0.540 1 ATOM 245 C CG2 . VAL 206 206 ? A -4.762 -0.759 12.936 1 1 B VAL 0.540 1 ATOM 246 N N . ALA 207 207 ? A -6.633 3.204 14.558 1 1 B ALA 0.540 1 ATOM 247 C CA . ALA 207 207 ? A -7.521 4.344 14.686 1 1 B ALA 0.540 1 ATOM 248 C C . ALA 207 207 ? A -6.835 5.706 14.890 1 1 B ALA 0.540 1 ATOM 249 O O . ALA 207 207 ? A -7.440 6.736 14.608 1 1 B ALA 0.540 1 ATOM 250 C CB . ALA 207 207 ? A -8.446 4.090 15.897 1 1 B ALA 0.540 1 ATOM 251 N N . HIS 208 208 ? A -5.594 5.718 15.416 1 1 B HIS 0.480 1 ATOM 252 C CA . HIS 208 208 ? A -4.720 6.884 15.521 1 1 B HIS 0.480 1 ATOM 253 C C . HIS 208 208 ? A -4.053 7.324 14.175 1 1 B HIS 0.480 1 ATOM 254 O O . HIS 208 208 ? A -4.133 6.580 13.166 1 1 B HIS 0.480 1 ATOM 255 C CB . HIS 208 208 ? A -3.588 6.569 16.537 1 1 B HIS 0.480 1 ATOM 256 C CG . HIS 208 208 ? A -2.686 7.713 16.873 1 1 B HIS 0.480 1 ATOM 257 N ND1 . HIS 208 208 ? A -3.092 8.689 17.773 1 1 B HIS 0.480 1 ATOM 258 C CD2 . HIS 208 208 ? A -1.497 8.051 16.318 1 1 B HIS 0.480 1 ATOM 259 C CE1 . HIS 208 208 ? A -2.150 9.602 17.720 1 1 B HIS 0.480 1 ATOM 260 N NE2 . HIS 208 208 ? A -1.151 9.270 16.863 1 1 B HIS 0.480 1 ATOM 261 O OXT . HIS 208 208 ? A -3.431 8.423 14.168 1 1 B HIS 0.480 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.588 2 1 3 0.035 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 178 GLU 1 0.660 2 1 A 179 CYS 1 0.730 3 1 A 180 LYS 1 0.550 4 1 A 181 ARG 1 0.550 5 1 A 182 LEU 1 0.570 6 1 A 183 GLN 1 0.550 7 1 A 184 GLY 1 0.600 8 1 A 185 GLU 1 0.580 9 1 A 186 MET 1 0.560 10 1 A 187 MET 1 0.570 11 1 A 188 LYS 1 0.590 12 1 A 189 LEU 1 0.590 13 1 A 190 SER 1 0.600 14 1 A 191 GLU 1 0.610 15 1 A 192 GLU 1 0.610 16 1 A 193 ASN 1 0.610 17 1 A 194 ARG 1 0.570 18 1 A 195 HIS 1 0.580 19 1 A 196 LEU 1 0.570 20 1 A 197 ARG 1 0.550 21 1 A 198 ASP 1 0.650 22 1 A 199 GLU 1 0.660 23 1 A 200 GLY 1 0.690 24 1 A 201 LEU 1 0.620 25 1 A 202 ARG 1 0.550 26 1 A 203 LEU 1 0.580 27 1 A 204 ARG 1 0.540 28 1 A 205 LYS 1 0.570 29 1 A 206 VAL 1 0.540 30 1 A 207 ALA 1 0.540 31 1 A 208 HIS 1 0.480 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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