data_SMR-6693a3fb1875b1313b8ad41ec013931e_2
_entry.id SMR-6693a3fb1875b1313b8ad41ec013931e_2
_struct.entry_id SMR-6693a3fb1875b1313b8ad41ec013931e_2
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - Q9H1K0/ RBNS5_HUMAN, Rabenosyn-5

Estimated model accuracy of this model is 0.067, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries Q9H1K0'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
ZN non-polymer 'ZINC ION' Zn 65.380 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 27565.633 1 .
2 non-polymer man 'ZINC ION' 65.380 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP RBNS5_HUMAN Q9H1K0 1
;MASLDDPGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGEDRDVKGQIKSLVQKAKKAKDRLLKREGDDR
AESGTQGYESFSYGGVDPYMWEPQELGAVRSHLSDFKKHRAARIDHYVVEVNKLIIRLEKLTAFDRTNTE
SAKIRAIEKSVVPWVNDQDVPFCPDCGNKFSIRNRRHHCRLCGSIMCKKCMELISLPLAKITTLHGES
;
Rabenosyn-5
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 208 1 208
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . RBNS5_HUMAN Q9H1K0 Q9H1K0-2 1 208 9606 'Homo sapiens (Human)' 2006-06-13
B416981A82661172
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no B
;MASLDDPGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGEDRDVKGQIKSLVQKAKKAKDRLLKREGDDR
AESGTQGYESFSYGGVDPYMWEPQELGAVRSHLSDFKKHRAARIDHYVVEVNKLIIRLEKLTAFDRTNTE
SAKIRAIEKSVVPWVNDQDVPFCPDCGNKFSIRNRRHHCRLCGSIMCKKCMELISLPLAKITTLHGES
;

;MASLDDPGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGEDRDVKGQIKSLVQKAKKAKDRLLKREGDDR
AESGTQGYESFSYGGVDPYMWEPQELGAVRSHLSDFKKHRAARIDHYVVEVNKLIIRLEKLTAFDRTNTE
SAKIRAIEKSVVPWVNDQDVPFCPDCGNKFSIRNRRHHCRLCGSIMCKKCMELISLPLAKITTLHGES
;

#
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
_pdbx_entity_nonpoly.ma_model_mode
2 'ZINC ION' ZN implicit
#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 ALA .
1 3 SER .
1 4 LEU .
1 5 ASP .
1 6 ASP .
1 7 PRO .
1 8 GLY .
1 9 GLU .
1 10 VAL .
1 11 ARG .
1 12 GLU .
1 13 GLY .
1 14 PHE .
1 15 LEU .
1 16 CYS .
1 17 PRO .
1 18 LEU .
1 19 CYS .
1 20 LEU .
1 21 LYS .
1 22 ASP .
1 23 LEU .
1 24 GLN .
1 25 SER .
1 26 PHE .
1 27 TYR .
1 28 GLN .
1 29 LEU .
1 30 HIS .
1 31 SER .
1 32 HIS .
1 33 TYR .
1 34 GLU .
1 35 GLU .
1 36 GLU .
1 37 HIS .
1 38 SER .
1 39 GLY .
1 40 GLU .
1 41 ASP .
1 42 ARG .
1 43 ASP .
1 44 VAL .
1 45 LYS .
1 46 GLY .
1 47 GLN .
1 48 ILE .
1 49 LYS .
1 50 SER .
1 51 LEU .
1 52 VAL .
1 53 GLN .
1 54 LYS .
1 55 ALA .
1 56 LYS .
1 57 LYS .
1 58 ALA .
1 59 LYS .
1 60 ASP .
1 61 ARG .
1 62 LEU .
1 63 LEU .
1 64 LYS .
1 65 ARG .
1 66 GLU .
1 67 GLY .
1 68 ASP .
1 69 ASP .
1 70 ARG .
1 71 ALA .
1 72 GLU .
1 73 SER .
1 74 GLY .
1 75 THR .
1 76 GLN .
1 77 GLY .
1 78 TYR .
1 79 GLU .
1 80 SER .
1 81 PHE .
1 82 SER .
1 83 TYR .
1 84 GLY .
1 85 GLY .
1 86 VAL .
1 87 ASP .
1 88 PRO .
1 89 TYR .
1 90 MET .
1 91 TRP .
1 92 GLU .
1 93 PRO .
1 94 GLN .
1 95 GLU .
1 96 LEU .
1 97 GLY .
1 98 ALA .
1 99 VAL .
1 100 ARG .
1 101 SER .
1 102 HIS .
1 103 LEU .
1 104 SER .
1 105 ASP .
1 106 PHE .
1 107 LYS .
1 108 LYS .
1 109 HIS .
1 110 ARG .
1 111 ALA .
1 112 ALA .
1 113 ARG .
1 114 ILE .
1 115 ASP .
1 116 HIS .
1 117 TYR .
1 118 VAL .
1 119 VAL .
1 120 GLU .
1 121 VAL .
1 122 ASN .
1 123 LYS .
1 124 LEU .
1 125 ILE .
1 126 ILE .
1 127 ARG .
1 128 LEU .
1 129 GLU .
1 130 LYS .
1 131 LEU .
1 132 THR .
1 133 ALA .
1 134 PHE .
1 135 ASP .
1 136 ARG .
1 137 THR .
1 138 ASN .
1 139 THR .
1 140 GLU .
1 141 SER .
1 142 ALA .
1 143 LYS .
1 144 ILE .
1 145 ARG .
1 146 ALA .
1 147 ILE .
1 148 GLU .
1 149 LYS .
1 150 SER .
1 151 VAL .
1 152 VAL .
1 153 PRO .
1 154 TRP .
1 155 VAL .
1 156 ASN .
1 157 ASP .
1 158 GLN .
1 159 ASP .
1 160 VAL .
1 161 PRO .
1 162 PHE .
1 163 CYS .
1 164 PRO .
1 165 ASP .
1 166 CYS .
1 167 GLY .
1 168 ASN .
1 169 LYS .
1 170 PHE .
1 171 SER .
1 172 ILE .
1 173 ARG .
1 174 ASN .
1 175 ARG .
1 176 ARG .
1 177 HIS .
1 178 HIS .
1 179 CYS .
1 180 ARG .
1 181 LEU .
1 182 CYS .
1 183 GLY .
1 184 SER .
1 185 ILE .
1 186 MET .
1 187 CYS .
1 188 LYS .
1 189 LYS .
1 190 CYS .
1 191 MET .
1 192 GLU .
1 193 LEU .
1 194 ILE .
1 195 SER .
1 196 LEU .
1 197 PRO .
1 198 LEU .
1 199 ALA .
1 200 LYS .
1 201 ILE .
1 202 THR .
1 203 THR .
1 204 LEU .
1 205 HIS .
1 206 GLY .
1 207 GLU .
1 208 SER .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
B 2 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? B .
A 1 2 ALA 2 ? ? ? B .
A 1 3 SER 3 ? ? ? B .
A 1 4 LEU 4 ? ? ? B .
A 1 5 ASP 5 ? ? ? B .
A 1 6 ASP 6 ? ? ? B .
A 1 7 PRO 7 ? ? ? B .
A 1 8 GLY 8 ? ? ? B .
A 1 9 GLU 9 ? ? ? B .
A 1 10 VAL 10 ? ? ? B .
A 1 11 ARG 11 11 ARG ARG B .
A 1 12 GLU 12 12 GLU GLU B .
A 1 13 GLY 13 13 GLY GLY B .
A 1 14 PHE 14 14 PHE PHE B .
A 1 15 LEU 15 15 LEU LEU B .
A 1 16 CYS 16 16 CYS CYS B .
A 1 17 PRO 17 17 PRO PRO B .
A 1 18 LEU 18 18 LEU LEU B .
A 1 19 CYS 19 19 CYS CYS B .
A 1 20 LEU 20 20 LEU LEU B .
A 1 21 LYS 21 21 LYS LYS B .
A 1 22 ASP 22 22 ASP ASP B .
A 1 23 LEU 23 23 LEU LEU B .
A 1 24 GLN 24 24 GLN GLN B .
A 1 25 SER 25 25 SER SER B .
A 1 26 PHE 26 26 PHE PHE B .
A 1 27 TYR 27 27 TYR TYR B .
A 1 28 GLN 28 28 GLN GLN B .
A 1 29 LEU 29 29 LEU LEU B .
A 1 30 HIS 30 30 HIS HIS B .
A 1 31 SER 31 31 SER SER B .
A 1 32 HIS 32 32 HIS HIS B .
A 1 33 TYR 33 33 TYR TYR B .
A 1 34 GLU 34 34 GLU GLU B .
A 1 35 GLU 35 35 GLU GLU B .
A 1 36 GLU 36 36 GLU GLU B .
A 1 37 HIS 37 37 HIS HIS B .
A 1 38 SER 38 38 SER SER B .
A 1 39 GLY 39 39 GLY GLY B .
A 1 40 GLU 40 40 GLU GLU B .
A 1 41 ASP 41 ? ? ? B .
A 1 42 ARG 42 ? ? ? B .
A 1 43 ASP 43 ? ? ? B .
A 1 44 VAL 44 ? ? ? B .
A 1 45 LYS 45 ? ? ? B .
A 1 46 GLY 46 ? ? ? B .
A 1 47 GLN 47 ? ? ? B .
A 1 48 ILE 48 ? ? ? B .
A 1 49 LYS 49 ? ? ? B .
A 1 50 SER 50 ? ? ? B .
A 1 51 LEU 51 ? ? ? B .
A 1 52 VAL 52 ? ? ? B .
A 1 53 GLN 53 ? ? ? B .
A 1 54 LYS 54 ? ? ? B .
A 1 55 ALA 55 ? ? ? B .
A 1 56 LYS 56 ? ? ? B .
A 1 57 LYS 57 ? ? ? B .
A 1 58 ALA 58 ? ? ? B .
A 1 59 LYS 59 ? ? ? B .
A 1 60 ASP 60 ? ? ? B .
A 1 61 ARG 61 ? ? ? B .
A 1 62 LEU 62 ? ? ? B .
A 1 63 LEU 63 ? ? ? B .
A 1 64 LYS 64 ? ? ? B .
A 1 65 ARG 65 ? ? ? B .
A 1 66 GLU 66 ? ? ? B .
A 1 67 GLY 67 ? ? ? B .
A 1 68 ASP 68 ? ? ? B .
A 1 69 ASP 69 ? ? ? B .
A 1 70 ARG 70 ? ? ? B .
A 1 71 ALA 71 ? ? ? B .
A 1 72 GLU 72 ? ? ? B .
A 1 73 SER 73 ? ? ? B .
A 1 74 GLY 74 ? ? ? B .
A 1 75 THR 75 ? ? ? B .
A 1 76 GLN 76 ? ? ? B .
A 1 77 GLY 77 ? ? ? B .
A 1 78 TYR 78 ? ? ? B .
A 1 79 GLU 79 ? ? ? B .
A 1 80 SER 80 ? ? ? B .
A 1 81 PHE 81 ? ? ? B .
A 1 82 SER 82 ? ? ? B .
A 1 83 TYR 83 ? ? ? B .
A 1 84 GLY 84 ? ? ? B .
A 1 85 GLY 85 ? ? ? B .
A 1 86 VAL 86 ? ? ? B .
A 1 87 ASP 87 ? ? ? B .
A 1 88 PRO 88 ? ? ? B .
A 1 89 TYR 89 ? ? ? B .
A 1 90 MET 90 ? ? ? B .
A 1 91 TRP 91 ? ? ? B .
A 1 92 GLU 92 ? ? ? B .
A 1 93 PRO 93 ? ? ? B .
A 1 94 GLN 94 ? ? ? B .
A 1 95 GLU 95 ? ? ? B .
A 1 96 LEU 96 ? ? ? B .
A 1 97 GLY 97 ? ? ? B .
A 1 98 ALA 98 ? ? ? B .
A 1 99 VAL 99 ? ? ? B .
A 1 100 ARG 100 ? ? ? B .
A 1 101 SER 101 ? ? ? B .
A 1 102 HIS 102 ? ? ? B .
A 1 103 LEU 103 ? ? ? B .
A 1 104 SER 104 ? ? ? B .
A 1 105 ASP 105 ? ? ? B .
A 1 106 PHE 106 ? ? ? B .
A 1 107 LYS 107 ? ? ? B .
A 1 108 LYS 108 ? ? ? B .
A 1 109 HIS 109 ? ? ? B .
A 1 110 ARG 110 ? ? ? B .
A 1 111 ALA 111 ? ? ? B .
A 1 112 ALA 112 ? ? ? B .
A 1 113 ARG 113 ? ? ? B .
A 1 114 ILE 114 ? ? ? B .
A 1 115 ASP 115 ? ? ? B .
A 1 116 HIS 116 ? ? ? B .
A 1 117 TYR 117 ? ? ? B .
A 1 118 VAL 118 ? ? ? B .
A 1 119 VAL 119 ? ? ? B .
A 1 120 GLU 120 ? ? ? B .
A 1 121 VAL 121 ? ? ? B .
A 1 122 ASN 122 ? ? ? B .
A 1 123 LYS 123 ? ? ? B .
A 1 124 LEU 124 ? ? ? B .
A 1 125 ILE 125 ? ? ? B .
A 1 126 ILE 126 ? ? ? B .
A 1 127 ARG 127 ? ? ? B .
A 1 128 LEU 128 ? ? ? B .
A 1 129 GLU 129 ? ? ? B .
A 1 130 LYS 130 ? ? ? B .
A 1 131 LEU 131 ? ? ? B .
A 1 132 THR 132 ? ? ? B .
A 1 133 ALA 133 ? ? ? B .
A 1 134 PHE 134 ? ? ? B .
A 1 135 ASP 135 ? ? ? B .
A 1 136 ARG 136 ? ? ? B .
A 1 137 THR 137 ? ? ? B .
A 1 138 ASN 138 ? ? ? B .
A 1 139 THR 139 ? ? ? B .
A 1 140 GLU 140 ? ? ? B .
A 1 141 SER 141 ? ? ? B .
A 1 142 ALA 142 ? ? ? B .
A 1 143 LYS 143 ? ? ? B .
A 1 144 ILE 144 ? ? ? B .
A 1 145 ARG 145 ? ? ? B .
A 1 146 ALA 146 ? ? ? B .
A 1 147 ILE 147 ? ? ? B .
A 1 148 GLU 148 ? ? ? B .
A 1 149 LYS 149 ? ? ? B .
A 1 150 SER 150 ? ? ? B .
A 1 151 VAL 151 ? ? ? B .
A 1 152 VAL 152 ? ? ? B .
A 1 153 PRO 153 ? ? ? B .
A 1 154 TRP 154 ? ? ? B .
A 1 155 VAL 155 ? ? ? B .
A 1 156 ASN 156 ? ? ? B .
A 1 157 ASP 157 ? ? ? B .
A 1 158 GLN 158 ? ? ? B .
A 1 159 ASP 159 ? ? ? B .
A 1 160 VAL 160 ? ? ? B .
A 1 161 PRO 161 ? ? ? B .
A 1 162 PHE 162 ? ? ? B .
A 1 163 CYS 163 ? ? ? B .
A 1 164 PRO 164 ? ? ? B .
A 1 165 ASP 165 ? ? ? B .
A 1 166 CYS 166 ? ? ? B .
A 1 167 GLY 167 ? ? ? B .
A 1 168 ASN 168 ? ? ? B .
A 1 169 LYS 169 ? ? ? B .
A 1 170 PHE 170 ? ? ? B .
A 1 171 SER 171 ? ? ? B .
A 1 172 ILE 172 ? ? ? B .
A 1 173 ARG 173 ? ? ? B .
A 1 174 ASN 174 ? ? ? B .
A 1 175 ARG 175 ? ? ? B .
A 1 176 ARG 176 ? ? ? B .
A 1 177 HIS 177 ? ? ? B .
A 1 178 HIS 178 ? ? ? B .
A 1 179 CYS 179 ? ? ? B .
A 1 180 ARG 180 ? ? ? B .
A 1 181 LEU 181 ? ? ? B .
A 1 182 CYS 182 ? ? ? B .
A 1 183 GLY 183 ? ? ? B .
A 1 184 SER 184 ? ? ? B .
A 1 185 ILE 185 ? ? ? B .
A 1 186 MET 186 ? ? ? B .
A 1 187 CYS 187 ? ? ? B .
A 1 188 LYS 188 ? ? ? B .
A 1 189 LYS 189 ? ? ? B .
A 1 190 CYS 190 ? ? ? B .
A 1 191 MET 191 ? ? ? B .
A 1 192 GLU 192 ? ? ? B .
A 1 193 LEU 193 ? ? ? B .
A 1 194 ILE 194 ? ? ? B .
A 1 195 SER 195 ? ? ? B .
A 1 196 LEU 196 ? ? ? B .
A 1 197 PRO 197 ? ? ? B .
A 1 198 LEU 198 ? ? ? B .
A 1 199 ALA 199 ? ? ? B .
A 1 200 LYS 200 ? ? ? B .
A 1 201 ILE 201 ? ? ? B .
A 1 202 THR 202 ? ? ? B .
A 1 203 THR 203 ? ? ? B .
A 1 204 LEU 204 ? ? ? B .
A 1 205 HIS 205 ? ? ? B .
A 1 206 GLY 206 ? ? ? B .
A 1 207 GLU 207 ? ? ? B .
A 1 208 SER 208 ? ? ? B .
#
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN 1 3 3 ZN '_' .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Early endosome antigen 1 {PDB ID=3mjh, label_asym_id=B, auth_asym_id=B, SMTL ID=3mjh.1.B}'
'template structure' .
2 'ZINC ION {PDB ID=3mjh, label_asym_id=G, auth_asym_id=B, SMTL ID=3mjh.1._.3}'
'template structure' .
3 . target .
4 'ZINC ION' target .
5 'Target-template alignment by HHblits to 3mjh, label_asym_id=B'
'target-template alignment' .
6 'model 2' 'model coordinates' .
7 SMTL 'reference database' .
8 PDB 'reference database' .
9 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 3
2 1 7
3 1 8
4 2 9
5 3 3
6 3 4
7 3 1
8 3 2
9 3 5
10 4 1
11 4 2
12 4 5
13 4 4
14 5 6
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
7 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-14
8 PDB https://www.wwpdb.org . 2024-11-08
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 3 'reference database'
2 4 .
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
B 2 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A B 2 1 B
2 2 'reference database' non-polymer 1 2 B G 5 1 B
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 SSSEGFICPQCMKSLGSADELFKHYEAVHDAGND SSSEGFICPQCMKSLGSADELFKHYEAVHDAGND
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 3 32
#
#
loop_
_ma_template_non_poly.template_id
_ma_template_non_poly.comp_id
_ma_template_non_poly.details
2 ZN 'ZINC ION'
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 3mjh 2024-02-21
2 PDB . 3mjh 2024-02-21
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 208
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 5 1 208 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 1.4e-06 46.667
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MASLDDPGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGEDRDVKGQIKSLVQKAKKAKDRLLKREGDDRAESGTQGYESFSYGGVDPYMWEPQELGAVRSHLSDFKKHRAARIDHYVVEVNKLIIRLEKLTAFDRTNTESAKIRAIEKSVVPWVNDQDVPFCPDCGNKFSIRNRRHHCRLCGSIMCKKCMELISLPLAKITTLHGES
2 1 2
----------SEGFICPQCMKSLGSADELFKHYEAVHDAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 3mjh.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 2' . 6 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . ARG 11 11 ? A 33.693 39.288 7.894 1 1 B ARG 0.420 1
ATOM 2 C CA . ARG 11 11 ? A 32.462 40.140 8.037 1 1 B ARG 0.420 1
ATOM 3 C C . ARG 11 11 ? A 31.131 39.456 7.769 1 1 B ARG 0.420 1
ATOM 4 O O . ARG 11 11 ? A 30.093 40.092 7.879 1 1 B ARG 0.420 1
ATOM 5 C CB . ARG 11 11 ? A 32.547 41.409 7.134 1 1 B ARG 0.420 1
ATOM 6 C CG . ARG 11 11 ? A 33.669 42.428 7.448 1 1 B ARG 0.420 1
ATOM 7 C CD . ARG 11 11 ? A 33.671 43.637 6.491 1 1 B ARG 0.420 1
ATOM 8 N NE . ARG 11 11 ? A 34.826 44.521 6.869 1 1 B ARG 0.420 1
ATOM 9 C CZ . ARG 11 11 ? A 35.188 45.609 6.168 1 1 B ARG 0.420 1
ATOM 10 N NH1 . ARG 11 11 ? A 34.537 45.968 5.066 1 1 B ARG 0.420 1
ATOM 11 N NH2 . ARG 11 11 ? A 36.213 46.359 6.572 1 1 B ARG 0.420 1
ATOM 12 N N . GLU 12 12 ? A 31.112 38.153 7.456 1 1 B GLU 0.620 1
ATOM 13 C CA . GLU 12 12 ? A 29.896 37.432 7.203 1 1 B GLU 0.620 1
ATOM 14 C C . GLU 12 12 ? A 30.214 36.088 7.807 1 1 B GLU 0.620 1
ATOM 15 O O . GLU 12 12 ? A 31.389 35.715 7.815 1 1 B GLU 0.620 1
ATOM 16 C CB . GLU 12 12 ? A 29.665 37.238 5.693 1 1 B GLU 0.620 1
ATOM 17 C CG . GLU 12 12 ? A 28.321 36.560 5.356 1 1 B GLU 0.620 1
ATOM 18 C CD . GLU 12 12 ? A 28.334 36.033 3.924 1 1 B GLU 0.620 1
ATOM 19 O OE1 . GLU 12 12 ? A 28.669 36.829 3.011 1 1 B GLU 0.620 1
ATOM 20 O OE2 . GLU 12 12 ? A 28.033 34.826 3.747 1 1 B GLU 0.620 1
ATOM 21 N N . GLY 13 13 ? A 29.208 35.388 8.349 1 1 B GLY 0.590 1
ATOM 22 C CA . GLY 13 13 ? A 29.321 34.064 8.935 1 1 B GLY 0.590 1
ATOM 23 C C . GLY 13 13 ? A 28.504 34.079 10.192 1 1 B GLY 0.590 1
ATOM 24 O O . GLY 13 13 ? A 27.636 34.936 10.375 1 1 B GLY 0.590 1
ATOM 25 N N . PHE 14 14 ? A 28.743 33.136 11.115 1 1 B PHE 0.540 1
ATOM 26 C CA . PHE 14 14 ? A 28.040 33.062 12.385 1 1 B PHE 0.540 1
ATOM 27 C C . PHE 14 14 ? A 28.681 34.006 13.398 1 1 B PHE 0.540 1
ATOM 28 O O . PHE 14 14 ? A 29.166 33.610 14.457 1 1 B PHE 0.540 1
ATOM 29 C CB . PHE 14 14 ? A 27.969 31.612 12.918 1 1 B PHE 0.540 1
ATOM 30 C CG . PHE 14 14 ? A 27.341 30.700 11.908 1 1 B PHE 0.540 1
ATOM 31 C CD1 . PHE 14 14 ? A 25.960 30.753 11.672 1 1 B PHE 0.540 1
ATOM 32 C CD2 . PHE 14 14 ? A 28.129 29.802 11.168 1 1 B PHE 0.540 1
ATOM 33 C CE1 . PHE 14 14 ? A 25.373 29.920 10.711 1 1 B PHE 0.540 1
ATOM 34 C CE2 . PHE 14 14 ? A 27.543 28.963 10.212 1 1 B PHE 0.540 1
ATOM 35 C CZ . PHE 14 14 ? A 26.162 29.018 9.987 1 1 B PHE 0.540 1
ATOM 36 N N . LEU 15 15 ? A 28.673 35.312 13.065 1 1 B LEU 0.550 1
ATOM 37 C CA . LEU 15 15 ? A 29.166 36.381 13.901 1 1 B LEU 0.550 1
ATOM 38 C C . LEU 15 15 ? A 28.215 36.672 15.047 1 1 B LEU 0.550 1
ATOM 39 O O . LEU 15 15 ? A 27.003 36.801 14.873 1 1 B LEU 0.550 1
ATOM 40 C CB . LEU 15 15 ? A 29.358 37.708 13.114 1 1 B LEU 0.550 1
ATOM 41 C CG . LEU 15 15 ? A 30.414 37.661 11.996 1 1 B LEU 0.550 1
ATOM 42 C CD1 . LEU 15 15 ? A 30.473 38.985 11.227 1 1 B LEU 0.550 1
ATOM 43 C CD2 . LEU 15 15 ? A 31.798 37.358 12.563 1 1 B LEU 0.550 1
ATOM 44 N N . CYS 16 16 ? A 28.741 36.828 16.273 1 1 B CYS 0.650 1
ATOM 45 C CA . CYS 16 16 ? A 27.953 37.355 17.368 1 1 B CYS 0.650 1
ATOM 46 C C . CYS 16 16 ? A 27.734 38.866 17.216 1 1 B CYS 0.650 1
ATOM 47 O O . CYS 16 16 ? A 28.725 39.591 17.154 1 1 B CYS 0.650 1
ATOM 48 C CB . CYS 16 16 ? A 28.633 37.065 18.729 1 1 B CYS 0.650 1
ATOM 49 S SG . CYS 16 16 ? A 27.651 37.636 20.159 1 1 B CYS 0.650 1
ATOM 50 N N . PRO 17 17 ? A 26.509 39.417 17.196 1 1 B PRO 0.590 1
ATOM 51 C CA . PRO 17 17 ? A 26.295 40.844 16.963 1 1 B PRO 0.590 1
ATOM 52 C C . PRO 17 17 ? A 26.721 41.680 18.142 1 1 B PRO 0.590 1
ATOM 53 O O . PRO 17 17 ? A 26.917 42.877 17.981 1 1 B PRO 0.590 1
ATOM 54 C CB . PRO 17 17 ? A 24.788 40.985 16.668 1 1 B PRO 0.590 1
ATOM 55 C CG . PRO 17 17 ? A 24.159 39.704 17.217 1 1 B PRO 0.590 1
ATOM 56 C CD . PRO 17 17 ? A 25.264 38.664 17.047 1 1 B PRO 0.590 1
ATOM 57 N N . LEU 18 18 ? A 26.840 41.083 19.340 1 1 B LEU 0.560 1
ATOM 58 C CA . LEU 18 18 ? A 27.223 41.830 20.522 1 1 B LEU 0.560 1
ATOM 59 C C . LEU 18 18 ? A 28.712 42.167 20.607 1 1 B LEU 0.560 1
ATOM 60 O O . LEU 18 18 ? A 29.092 43.304 20.867 1 1 B LEU 0.560 1
ATOM 61 C CB . LEU 18 18 ? A 26.741 41.079 21.779 1 1 B LEU 0.560 1
ATOM 62 C CG . LEU 18 18 ? A 26.466 41.981 22.996 1 1 B LEU 0.560 1
ATOM 63 C CD1 . LEU 18 18 ? A 25.418 41.308 23.879 1 1 B LEU 0.560 1
ATOM 64 C CD2 . LEU 18 18 ? A 27.700 42.278 23.850 1 1 B LEU 0.560 1
ATOM 65 N N . CYS 19 19 ? A 29.594 41.167 20.359 1 1 B CYS 0.580 1
ATOM 66 C CA . CYS 19 19 ? A 31.034 41.304 20.551 1 1 B CYS 0.580 1
ATOM 67 C C . CYS 19 19 ? A 31.847 41.055 19.281 1 1 B CYS 0.580 1
ATOM 68 O O . CYS 19 19 ? A 33.074 41.072 19.301 1 1 B CYS 0.580 1
ATOM 69 C CB . CYS 19 19 ? A 31.546 40.370 21.691 1 1 B CYS 0.580 1
ATOM 70 S SG . CYS 19 19 ? A 31.136 38.601 21.496 1 1 B CYS 0.580 1
ATOM 71 N N . LEU 20 20 ? A 31.171 40.797 18.145 1 1 B LEU 0.520 1
ATOM 72 C CA . LEU 20 20 ? A 31.751 40.532 16.829 1 1 B LEU 0.520 1
ATOM 73 C C . LEU 20 20 ? A 32.579 39.255 16.727 1 1 B LEU 0.520 1
ATOM 74 O O . LEU 20 20 ? A 33.265 38.998 15.741 1 1 B LEU 0.520 1
ATOM 75 C CB . LEU 20 20 ? A 32.500 41.740 16.225 1 1 B LEU 0.520 1
ATOM 76 C CG . LEU 20 20 ? A 31.663 43.027 16.114 1 1 B LEU 0.520 1
ATOM 77 C CD1 . LEU 20 20 ? A 32.582 44.162 15.652 1 1 B LEU 0.520 1
ATOM 78 C CD2 . LEU 20 20 ? A 30.451 42.882 15.180 1 1 B LEU 0.520 1
ATOM 79 N N . LYS 21 21 ? A 32.488 38.375 17.739 1 1 B LYS 0.580 1
ATOM 80 C CA . LYS 21 21 ? A 33.157 37.091 17.733 1 1 B LYS 0.580 1
ATOM 81 C C . LYS 21 21 ? A 32.624 36.148 16.658 1 1 B LYS 0.580 1
ATOM 82 O O . LYS 21 21 ? A 31.432 35.840 16.624 1 1 B LYS 0.580 1
ATOM 83 C CB . LYS 21 21 ? A 33.056 36.430 19.129 1 1 B LYS 0.580 1
ATOM 84 C CG . LYS 21 21 ? A 33.904 35.156 19.295 1 1 B LYS 0.580 1
ATOM 85 C CD . LYS 21 21 ? A 33.997 34.733 20.772 1 1 B LYS 0.580 1
ATOM 86 C CE . LYS 21 21 ? A 34.628 33.364 21.051 1 1 B LYS 0.580 1
ATOM 87 N NZ . LYS 21 21 ? A 36.030 33.350 20.583 1 1 B LYS 0.580 1
ATOM 88 N N . ASP 22 22 ? A 33.521 35.671 15.771 1 1 B ASP 0.560 1
ATOM 89 C CA . ASP 22 22 ? A 33.218 34.729 14.720 1 1 B ASP 0.560 1
ATOM 90 C C . ASP 22 22 ? A 33.284 33.332 15.318 1 1 B ASP 0.560 1
ATOM 91 O O . ASP 22 22 ? A 34.194 32.989 16.083 1 1 B ASP 0.560 1
ATOM 92 C CB . ASP 22 22 ? A 34.183 34.983 13.527 1 1 B ASP 0.560 1
ATOM 93 C CG . ASP 22 22 ? A 33.701 34.410 12.194 1 1 B ASP 0.560 1
ATOM 94 O OD1 . ASP 22 22 ? A 32.712 33.645 12.179 1 1 B ASP 0.560 1
ATOM 95 O OD2 . ASP 22 22 ? A 34.325 34.801 11.164 1 1 B ASP 0.560 1
ATOM 96 N N . LEU 23 23 ? A 32.234 32.536 15.074 1 1 B LEU 0.560 1
ATOM 97 C CA . LEU 23 23 ? A 32.104 31.206 15.615 1 1 B LEU 0.560 1
ATOM 98 C C . LEU 23 23 ? A 31.776 30.276 14.471 1 1 B LEU 0.560 1
ATOM 99 O O . LEU 23 23 ? A 31.121 30.629 13.497 1 1 B LEU 0.560 1
ATOM 100 C CB . LEU 23 23 ? A 31.048 31.151 16.755 1 1 B LEU 0.560 1
ATOM 101 C CG . LEU 23 23 ? A 31.429 32.023 17.973 1 1 B LEU 0.560 1
ATOM 102 C CD1 . LEU 23 23 ? A 30.328 33.036 18.327 1 1 B LEU 0.560 1
ATOM 103 C CD2 . LEU 23 23 ? A 31.846 31.150 19.167 1 1 B LEU 0.560 1
ATOM 104 N N . GLN 24 24 ? A 32.264 29.027 14.529 1 1 B GLN 0.570 1
ATOM 105 C CA . GLN 24 24 ? A 32.358 28.178 13.355 1 1 B GLN 0.570 1
ATOM 106 C C . GLN 24 24 ? A 31.034 27.582 12.893 1 1 B GLN 0.570 1
ATOM 107 O O . GLN 24 24 ? A 30.911 27.057 11.789 1 1 B GLN 0.570 1
ATOM 108 C CB . GLN 24 24 ? A 33.325 27.028 13.677 1 1 B GLN 0.570 1
ATOM 109 C CG . GLN 24 24 ? A 34.760 27.489 14.007 1 1 B GLN 0.570 1
ATOM 110 C CD . GLN 24 24 ? A 35.592 26.284 14.446 1 1 B GLN 0.570 1
ATOM 111 O OE1 . GLN 24 24 ? A 35.077 25.284 14.941 1 1 B GLN 0.570 1
ATOM 112 N NE2 . GLN 24 24 ? A 36.930 26.383 14.249 1 1 B GLN 0.570 1
ATOM 113 N N . SER 25 25 ? A 29.998 27.654 13.742 1 1 B SER 0.600 1
ATOM 114 C CA . SER 25 25 ? A 28.698 27.092 13.447 1 1 B SER 0.600 1
ATOM 115 C C . SER 25 25 ? A 27.619 27.875 14.154 1 1 B SER 0.600 1
ATOM 116 O O . SER 25 25 ? A 27.874 28.611 15.108 1 1 B SER 0.600 1
ATOM 117 C CB . SER 25 25 ? A 28.563 25.573 13.773 1 1 B SER 0.600 1
ATOM 118 O OG . SER 25 25 ? A 28.386 25.270 15.172 1 1 B SER 0.600 1
ATOM 119 N N . PHE 26 26 ? A 26.357 27.712 13.707 1 1 B PHE 0.570 1
ATOM 120 C CA . PHE 26 26 ? A 25.182 28.267 14.359 1 1 B PHE 0.570 1
ATOM 121 C C . PHE 26 26 ? A 25.025 27.776 15.797 1 1 B PHE 0.570 1
ATOM 122 O O . PHE 26 26 ? A 24.708 28.544 16.699 1 1 B PHE 0.570 1
ATOM 123 C CB . PHE 26 26 ? A 23.922 27.920 13.524 1 1 B PHE 0.570 1
ATOM 124 C CG . PHE 26 26 ? A 22.669 28.476 14.144 1 1 B PHE 0.570 1
ATOM 125 C CD1 . PHE 26 26 ? A 21.865 27.655 14.953 1 1 B PHE 0.570 1
ATOM 126 C CD2 . PHE 26 26 ? A 22.344 29.835 14.010 1 1 B PHE 0.570 1
ATOM 127 C CE1 . PHE 26 26 ? A 20.751 28.183 15.615 1 1 B PHE 0.570 1
ATOM 128 C CE2 . PHE 26 26 ? A 21.221 30.361 14.663 1 1 B PHE 0.570 1
ATOM 129 C CZ . PHE 26 26 ? A 20.422 29.534 15.462 1 1 B PHE 0.570 1
ATOM 130 N N . TYR 27 27 ? A 25.277 26.472 16.044 1 1 B TYR 0.590 1
ATOM 131 C CA . TYR 27 27 ? A 25.251 25.906 17.381 1 1 B TYR 0.590 1
ATOM 132 C C . TYR 27 27 ? A 26.295 26.554 18.289 1 1 B TYR 0.590 1
ATOM 133 O O . TYR 27 27 ? A 25.985 26.969 19.398 1 1 B TYR 0.590 1
ATOM 134 C CB . TYR 27 27 ? A 25.408 24.364 17.305 1 1 B TYR 0.590 1
ATOM 135 C CG . TYR 27 27 ? A 25.328 23.722 18.666 1 1 B TYR 0.590 1
ATOM 136 C CD1 . TYR 27 27 ? A 26.501 23.328 19.329 1 1 B TYR 0.590 1
ATOM 137 C CD2 . TYR 27 27 ? A 24.092 23.551 19.311 1 1 B TYR 0.590 1
ATOM 138 C CE1 . TYR 27 27 ? A 26.440 22.770 20.611 1 1 B TYR 0.590 1
ATOM 139 C CE2 . TYR 27 27 ? A 24.030 22.992 20.597 1 1 B TYR 0.590 1
ATOM 140 C CZ . TYR 27 27 ? A 25.208 22.591 21.242 1 1 B TYR 0.590 1
ATOM 141 O OH . TYR 27 27 ? A 25.178 22.010 22.524 1 1 B TYR 0.590 1
ATOM 142 N N . GLN 28 28 ? A 27.540 26.737 17.804 1 1 B GLN 0.610 1
ATOM 143 C CA . GLN 28 28 ? A 28.574 27.447 18.541 1 1 B GLN 0.610 1
ATOM 144 C C . GLN 28 28 ? A 28.218 28.905 18.824 1 1 B GLN 0.610 1
ATOM 145 O O . GLN 28 28 ? A 28.496 29.429 19.899 1 1 B GLN 0.610 1
ATOM 146 C CB . GLN 28 28 ? A 29.930 27.324 17.822 1 1 B GLN 0.610 1
ATOM 147 C CG . GLN 28 28 ? A 30.513 25.890 17.838 1 1 B GLN 0.610 1
ATOM 148 C CD . GLN 28 28 ? A 31.825 25.884 17.048 1 1 B GLN 0.610 1
ATOM 149 O OE1 . GLN 28 28 ? A 32.533 26.889 17.000 1 1 B GLN 0.610 1
ATOM 150 N NE2 . GLN 28 28 ? A 32.159 24.750 16.385 1 1 B GLN 0.610 1
ATOM 151 N N . LEU 29 29 ? A 27.553 29.588 17.875 1 1 B LEU 0.630 1
ATOM 152 C CA . LEU 29 29 ? A 27.000 30.908 18.109 1 1 B LEU 0.630 1
ATOM 153 C C . LEU 29 29 ? A 25.902 30.975 19.169 1 1 B LEU 0.630 1
ATOM 154 O O . LEU 29 29 ? A 25.958 31.814 20.068 1 1 B LEU 0.630 1
ATOM 155 C CB . LEU 29 29 ? A 26.549 31.530 16.778 1 1 B LEU 0.630 1
ATOM 156 C CG . LEU 29 29 ? A 25.887 32.916 16.869 1 1 B LEU 0.630 1
ATOM 157 C CD1 . LEU 29 29 ? A 26.722 33.949 17.635 1 1 B LEU 0.630 1
ATOM 158 C CD2 . LEU 29 29 ? A 25.629 33.447 15.458 1 1 B LEU 0.630 1
ATOM 159 N N . HIS 30 30 ? A 24.913 30.055 19.142 1 1 B HIS 0.600 1
ATOM 160 C CA . HIS 30 30 ? A 23.891 29.951 20.176 1 1 B HIS 0.600 1
ATOM 161 C C . HIS 30 30 ? A 24.498 29.659 21.544 1 1 B HIS 0.600 1
ATOM 162 O O . HIS 30 30 ? A 24.205 30.329 22.528 1 1 B HIS 0.600 1
ATOM 163 C CB . HIS 30 30 ? A 22.864 28.856 19.796 1 1 B HIS 0.600 1
ATOM 164 C CG . HIS 30 30 ? A 21.766 28.669 20.795 1 1 B HIS 0.600 1
ATOM 165 N ND1 . HIS 30 30 ? A 20.772 29.622 20.865 1 1 B HIS 0.600 1
ATOM 166 C CD2 . HIS 30 30 ? A 21.625 27.764 21.796 1 1 B HIS 0.600 1
ATOM 167 C CE1 . HIS 30 30 ? A 20.049 29.289 21.914 1 1 B HIS 0.600 1
ATOM 168 N NE2 . HIS 30 30 ? A 20.518 28.165 22.515 1 1 B HIS 0.600 1
ATOM 169 N N . SER 31 31 ? A 25.443 28.697 21.603 1 1 B SER 0.630 1
ATOM 170 C CA . SER 31 31 ? A 26.182 28.369 22.819 1 1 B SER 0.630 1
ATOM 171 C C . SER 31 31 ? A 26.970 29.545 23.391 1 1 B SER 0.630 1
ATOM 172 O O . SER 31 31 ? A 26.809 29.920 24.545 1 1 B SER 0.630 1
ATOM 173 C CB . SER 31 31 ? A 27.153 27.185 22.578 1 1 B SER 0.630 1
ATOM 174 O OG . SER 31 31 ? A 26.432 25.995 22.243 1 1 B SER 0.630 1
ATOM 175 N N . HIS 32 32 ? A 27.761 30.241 22.549 1 1 B HIS 0.600 1
ATOM 176 C CA . HIS 32 32 ? A 28.508 31.432 22.928 1 1 B HIS 0.600 1
ATOM 177 C C . HIS 32 32 ? A 27.620 32.566 23.414 1 1 B HIS 0.600 1
ATOM 178 O O . HIS 32 32 ? A 27.915 33.238 24.398 1 1 B HIS 0.600 1
ATOM 179 C CB . HIS 32 32 ? A 29.328 31.921 21.703 1 1 B HIS 0.600 1
ATOM 180 C CG . HIS 32 32 ? A 29.807 33.339 21.755 1 1 B HIS 0.600 1
ATOM 181 N ND1 . HIS 32 32 ? A 30.910 33.668 22.516 1 1 B HIS 0.600 1
ATOM 182 C CD2 . HIS 32 32 ? A 29.158 34.462 21.358 1 1 B HIS 0.600 1
ATOM 183 C CE1 . HIS 32 32 ? A 30.896 34.979 22.589 1 1 B HIS 0.600 1
ATOM 184 N NE2 . HIS 32 32 ? A 29.864 35.513 21.894 1 1 B HIS 0.600 1
ATOM 185 N N . TYR 33 33 ? A 26.490 32.825 22.726 1 1 B TYR 0.610 1
ATOM 186 C CA . TYR 33 33 ? A 25.595 33.902 23.112 1 1 B TYR 0.610 1
ATOM 187 C C . TYR 33 33 ? A 24.952 33.690 24.481 1 1 B TYR 0.610 1
ATOM 188 O O . TYR 33 33 ? A 24.931 34.590 25.319 1 1 B TYR 0.610 1
ATOM 189 C CB . TYR 33 33 ? A 24.519 34.113 22.019 1 1 B TYR 0.610 1
ATOM 190 C CG . TYR 33 33 ? A 23.836 35.447 22.166 1 1 B TYR 0.610 1
ATOM 191 C CD1 . TYR 33 33 ? A 24.249 36.541 21.390 1 1 B TYR 0.610 1
ATOM 192 C CD2 . TYR 33 33 ? A 22.795 35.626 23.093 1 1 B TYR 0.610 1
ATOM 193 C CE1 . TYR 33 33 ? A 23.649 37.797 21.550 1 1 B TYR 0.610 1
ATOM 194 C CE2 . TYR 33 33 ? A 22.196 36.883 23.259 1 1 B TYR 0.610 1
ATOM 195 C CZ . TYR 33 33 ? A 22.623 37.966 22.482 1 1 B TYR 0.610 1
ATOM 196 O OH . TYR 33 33 ? A 22.015 39.226 22.623 1 1 B TYR 0.610 1
ATOM 197 N N . GLU 34 34 ? A 24.449 32.470 24.738 1 1 B GLU 0.590 1
ATOM 198 C CA . GLU 34 34 ? A 23.850 32.105 26.008 1 1 B GLU 0.590 1
ATOM 199 C C . GLU 34 34 ? A 24.835 32.083 27.171 1 1 B GLU 0.590 1
ATOM 200 O O . GLU 34 34 ? A 24.494 32.461 28.284 1 1 B GLU 0.590 1
ATOM 201 C CB . GLU 34 34 ? A 23.059 30.780 25.904 1 1 B GLU 0.590 1
ATOM 202 C CG . GLU 34 34 ? A 21.774 30.878 25.037 1 1 B GLU 0.590 1
ATOM 203 C CD . GLU 34 34 ? A 20.813 31.964 25.525 1 1 B GLU 0.590 1
ATOM 204 O OE1 . GLU 34 34 ? A 20.481 32.852 24.702 1 1 B GLU 0.590 1
ATOM 205 O OE2 . GLU 34 34 ? A 20.411 31.931 26.719 1 1 B GLU 0.590 1
ATOM 206 N N . GLU 35 35 ? A 26.096 31.661 26.946 1 1 B GLU 0.590 1
ATOM 207 C CA . GLU 35 35 ? A 27.109 31.632 27.991 1 1 B GLU 0.590 1
ATOM 208 C C . GLU 35 35 ? A 27.625 33.005 28.437 1 1 B GLU 0.590 1
ATOM 209 O O . GLU 35 35 ? A 28.013 33.185 29.587 1 1 B GLU 0.590 1
ATOM 210 C CB . GLU 35 35 ? A 28.295 30.738 27.559 1 1 B GLU 0.590 1
ATOM 211 C CG . GLU 35 35 ? A 27.914 29.235 27.470 1 1 B GLU 0.590 1
ATOM 212 C CD . GLU 35 35 ? A 29.011 28.299 26.949 1 1 B GLU 0.590 1
ATOM 213 O OE1 . GLU 35 35 ? A 30.110 28.765 26.563 1 1 B GLU 0.590 1
ATOM 214 O OE2 . GLU 35 35 ? A 28.727 27.070 26.926 1 1 B GLU 0.590 1
ATOM 215 N N . GLU 36 36 ? A 27.636 34.001 27.520 1 1 B GLU 0.560 1
ATOM 216 C CA . GLU 36 36 ? A 28.282 35.286 27.767 1 1 B GLU 0.560 1
ATOM 217 C C . GLU 36 36 ? A 27.317 36.481 27.842 1 1 B GLU 0.560 1
ATOM 218 O O . GLU 36 36 ? A 27.560 37.448 28.566 1 1 B GLU 0.560 1
ATOM 219 C CB . GLU 36 36 ? A 29.326 35.529 26.640 1 1 B GLU 0.560 1
ATOM 220 C CG . GLU 36 36 ? A 30.485 34.490 26.617 1 1 B GLU 0.560 1
ATOM 221 C CD . GLU 36 36 ? A 31.478 34.621 27.779 1 1 B GLU 0.560 1
ATOM 222 O OE1 . GLU 36 36 ? A 31.470 35.669 28.474 1 1 B GLU 0.560 1
ATOM 223 O OE2 . GLU 36 36 ? A 32.315 33.692 27.925 1 1 B GLU 0.560 1
ATOM 224 N N . HIS 37 37 ? A 26.163 36.451 27.128 1 1 B HIS 0.500 1
ATOM 225 C CA . HIS 37 37 ? A 25.362 37.652 26.889 1 1 B HIS 0.500 1
ATOM 226 C C . HIS 37 37 ? A 23.907 37.583 27.344 1 1 B HIS 0.500 1
ATOM 227 O O . HIS 37 37 ? A 23.170 38.572 27.261 1 1 B HIS 0.500 1
ATOM 228 C CB . HIS 37 37 ? A 25.322 37.933 25.369 1 1 B HIS 0.500 1
ATOM 229 C CG . HIS 37 37 ? A 26.679 38.061 24.753 1 1 B HIS 0.500 1
ATOM 230 N ND1 . HIS 37 37 ? A 27.617 38.848 25.387 1 1 B HIS 0.500 1
ATOM 231 C CD2 . HIS 37 37 ? A 27.174 37.600 23.577 1 1 B HIS 0.500 1
ATOM 232 C CE1 . HIS 37 37 ? A 28.666 38.844 24.609 1 1 B HIS 0.500 1
ATOM 233 N NE2 . HIS 37 37 ? A 28.456 38.114 23.484 1 1 B HIS 0.500 1
ATOM 234 N N . SER 38 38 ? A 23.434 36.429 27.845 1 1 B SER 0.530 1
ATOM 235 C CA . SER 38 38 ? A 22.020 36.210 28.141 1 1 B SER 0.530 1
ATOM 236 C C . SER 38 38 ? A 21.733 36.297 29.630 1 1 B SER 0.530 1
ATOM 237 O O . SER 38 38 ? A 21.628 35.307 30.330 1 1 B SER 0.530 1
ATOM 238 C CB . SER 38 38 ? A 21.477 34.841 27.643 1 1 B SER 0.530 1
ATOM 239 O OG . SER 38 38 ? A 20.053 34.708 27.800 1 1 B SER 0.530 1
ATOM 240 N N . GLY 39 39 ? A 21.539 37.519 30.157 1 1 B GLY 0.590 1
ATOM 241 C CA . GLY 39 39 ? A 21.008 37.664 31.515 1 1 B GLY 0.590 1
ATOM 242 C C . GLY 39 39 ? A 21.683 36.997 32.724 1 1 B GLY 0.590 1
ATOM 243 O O . GLY 39 39 ? A 20.955 36.597 33.628 1 1 B GLY 0.590 1
ATOM 244 N N . GLU 40 40 ? A 23.040 36.941 32.750 1 1 B GLU 0.410 1
ATOM 245 C CA . GLU 40 40 ? A 23.912 36.283 33.739 1 1 B GLU 0.410 1
ATOM 246 C C . GLU 40 40 ? A 24.345 34.857 33.256 1 1 B GLU 0.410 1
ATOM 247 O O . GLU 40 40 ? A 23.646 34.299 32.350 1 1 B GLU 0.410 1
ATOM 248 C CB . GLU 40 40 ? A 23.450 36.399 35.235 1 1 B GLU 0.410 1
ATOM 249 C CG . GLU 40 40 ? A 24.442 35.961 36.364 1 1 B GLU 0.410 1
ATOM 250 C CD . GLU 40 40 ? A 25.696 36.821 36.602 1 1 B GLU 0.410 1
ATOM 251 O OE1 . GLU 40 40 ? A 26.581 36.319 37.349 1 1 B GLU 0.410 1
ATOM 252 O OE2 . GLU 40 40 ? A 25.747 38.000 36.155 1 1 B GLU 0.410 1
ATOM 253 O OXT . GLU 40 40 ? A 25.389 34.349 33.724 1 1 B GLU 0.410 1
HETATM 254 ZN ZN . ZN . 3 ? B 29.541 37.591 21.668 1 2 '_' ZN . 1
#
#
loop_
_atom_type.symbol
C
N
O
S
ZN
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.570
2 1 3 0.067
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 11 ARG 1 0.420
2 1 A 12 GLU 1 0.620
3 1 A 13 GLY 1 0.590
4 1 A 14 PHE 1 0.540
5 1 A 15 LEU 1 0.550
6 1 A 16 CYS 1 0.650
7 1 A 17 PRO 1 0.590
8 1 A 18 LEU 1 0.560
9 1 A 19 CYS 1 0.580
10 1 A 20 LEU 1 0.520
11 1 A 21 LYS 1 0.580
12 1 A 22 ASP 1 0.560
13 1 A 23 LEU 1 0.560
14 1 A 24 GLN 1 0.570
15 1 A 25 SER 1 0.600
16 1 A 26 PHE 1 0.570
17 1 A 27 TYR 1 0.590
18 1 A 28 GLN 1 0.610
19 1 A 29 LEU 1 0.630
20 1 A 30 HIS 1 0.600
21 1 A 31 SER 1 0.630
22 1 A 32 HIS 1 0.600
23 1 A 33 TYR 1 0.610
24 1 A 34 GLU 1 0.590
25 1 A 35 GLU 1 0.590
26 1 A 36 GLU 1 0.560
27 1 A 37 HIS 1 0.500
28 1 A 38 SER 1 0.530
29 1 A 39 GLY 1 0.590
30 1 A 40 GLU 1 0.410
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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