data_SMR-edb371379da2f0cac105404fa694e683_2 _entry.id SMR-edb371379da2f0cac105404fa694e683_2 _struct.entry_id SMR-edb371379da2f0cac105404fa694e683_2 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q9BPX7/ CG025_HUMAN, UPF0415 protein C7orf25 Estimated model accuracy of this model is 0.0, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q9BPX7' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 54079.897 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP CG025_HUMAN Q9BPX7 1 ;MSAHSMLCERIAIAKELIKRAESLSRSRKGGIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTNLT HLRAIVESAENLEEVVSVLHVFGYTDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDK SIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSVSSPMAEKLKEMGISVRGDIVAVNALLDHPEELQPSES ESDDEGPELLQVTRVDRENILASVAFPTEIKVDVCKRVNLDITTLITYVSALSYGGCHFIFKEKVLTEQA EQERKEQVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERATVLIKRINVVPDQPSERALRLVA SSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEALATPLPKDYTTDSE H ; 'UPF0415 protein C7orf25' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 421 1 421 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . CG025_HUMAN Q9BPX7 . 1 421 9606 'Homo sapiens (Human)' 2001-06-01 D7C421DC4CA80E9C # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no E ;MSAHSMLCERIAIAKELIKRAESLSRSRKGGIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTNLT HLRAIVESAENLEEVVSVLHVFGYTDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDK SIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSVSSPMAEKLKEMGISVRGDIVAVNALLDHPEELQPSES ESDDEGPELLQVTRVDRENILASVAFPTEIKVDVCKRVNLDITTLITYVSALSYGGCHFIFKEKVLTEQA EQERKEQVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERATVLIKRINVVPDQPSERALRLVA SSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEALATPLPKDYTTDSE H ; ;MSAHSMLCERIAIAKELIKRAESLSRSRKGGIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTNLT HLRAIVESAENLEEVVSVLHVFGYTDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDK SIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSVSSPMAEKLKEMGISVRGDIVAVNALLDHPEELQPSES ESDDEGPELLQVTRVDRENILASVAFPTEIKVDVCKRVNLDITTLITYVSALSYGGCHFIFKEKVLTEQA EQERKEQVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERATVLIKRINVVPDQPSERALRLVA SSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEALATPLPKDYTTDSE H ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 SER . 1 3 ALA . 1 4 HIS . 1 5 SER . 1 6 MET . 1 7 LEU . 1 8 CYS . 1 9 GLU . 1 10 ARG . 1 11 ILE . 1 12 ALA . 1 13 ILE . 1 14 ALA . 1 15 LYS . 1 16 GLU . 1 17 LEU . 1 18 ILE . 1 19 LYS . 1 20 ARG . 1 21 ALA . 1 22 GLU . 1 23 SER . 1 24 LEU . 1 25 SER . 1 26 ARG . 1 27 SER . 1 28 ARG . 1 29 LYS . 1 30 GLY . 1 31 GLY . 1 32 ILE . 1 33 GLU . 1 34 GLY . 1 35 GLY . 1 36 ALA . 1 37 LYS . 1 38 LEU . 1 39 CYS . 1 40 SER . 1 41 LYS . 1 42 LEU . 1 43 LYS . 1 44 ALA . 1 45 GLU . 1 46 LEU . 1 47 LYS . 1 48 PHE . 1 49 LEU . 1 50 GLN . 1 51 LYS . 1 52 VAL . 1 53 GLU . 1 54 ALA . 1 55 GLY . 1 56 LYS . 1 57 VAL . 1 58 ALA . 1 59 ILE . 1 60 LYS . 1 61 GLU . 1 62 SER . 1 63 HIS . 1 64 LEU . 1 65 GLN . 1 66 SER . 1 67 THR . 1 68 ASN . 1 69 LEU . 1 70 THR . 1 71 HIS . 1 72 LEU . 1 73 ARG . 1 74 ALA . 1 75 ILE . 1 76 VAL . 1 77 GLU . 1 78 SER . 1 79 ALA . 1 80 GLU . 1 81 ASN . 1 82 LEU . 1 83 GLU . 1 84 GLU . 1 85 VAL . 1 86 VAL . 1 87 SER . 1 88 VAL . 1 89 LEU . 1 90 HIS . 1 91 VAL . 1 92 PHE . 1 93 GLY . 1 94 TYR . 1 95 THR . 1 96 ASP . 1 97 THR . 1 98 LEU . 1 99 GLY . 1 100 GLU . 1 101 LYS . 1 102 GLN . 1 103 THR . 1 104 LEU . 1 105 VAL . 1 106 VAL . 1 107 ASP . 1 108 VAL . 1 109 VAL . 1 110 ALA . 1 111 ASN . 1 112 GLY . 1 113 GLY . 1 114 HIS . 1 115 THR . 1 116 TRP . 1 117 VAL . 1 118 LYS . 1 119 ALA . 1 120 ILE . 1 121 GLY . 1 122 ARG . 1 123 LYS . 1 124 ALA . 1 125 GLU . 1 126 ALA . 1 127 LEU . 1 128 HIS . 1 129 ASN . 1 130 ILE . 1 131 TRP . 1 132 LEU . 1 133 GLY . 1 134 ARG . 1 135 GLY . 1 136 GLN . 1 137 TYR . 1 138 GLY . 1 139 ASP . 1 140 LYS . 1 141 SER . 1 142 ILE . 1 143 ILE . 1 144 GLU . 1 145 GLN . 1 146 ALA . 1 147 GLU . 1 148 ASP . 1 149 PHE . 1 150 LEU . 1 151 GLN . 1 152 ALA . 1 153 SER . 1 154 HIS . 1 155 GLN . 1 156 GLN . 1 157 PRO . 1 158 VAL . 1 159 GLN . 1 160 TYR . 1 161 SER . 1 162 ASN . 1 163 PRO . 1 164 HIS . 1 165 ILE . 1 166 ILE . 1 167 PHE . 1 168 ALA . 1 169 PHE . 1 170 TYR . 1 171 ASN . 1 172 SER . 1 173 VAL . 1 174 SER . 1 175 SER . 1 176 PRO . 1 177 MET . 1 178 ALA . 1 179 GLU . 1 180 LYS . 1 181 LEU . 1 182 LYS . 1 183 GLU . 1 184 MET . 1 185 GLY . 1 186 ILE . 1 187 SER . 1 188 VAL . 1 189 ARG . 1 190 GLY . 1 191 ASP . 1 192 ILE . 1 193 VAL . 1 194 ALA . 1 195 VAL . 1 196 ASN . 1 197 ALA . 1 198 LEU . 1 199 LEU . 1 200 ASP . 1 201 HIS . 1 202 PRO . 1 203 GLU . 1 204 GLU . 1 205 LEU . 1 206 GLN . 1 207 PRO . 1 208 SER . 1 209 GLU . 1 210 SER . 1 211 GLU . 1 212 SER . 1 213 ASP . 1 214 ASP . 1 215 GLU . 1 216 GLY . 1 217 PRO . 1 218 GLU . 1 219 LEU . 1 220 LEU . 1 221 GLN . 1 222 VAL . 1 223 THR . 1 224 ARG . 1 225 VAL . 1 226 ASP . 1 227 ARG . 1 228 GLU . 1 229 ASN . 1 230 ILE . 1 231 LEU . 1 232 ALA . 1 233 SER . 1 234 VAL . 1 235 ALA . 1 236 PHE . 1 237 PRO . 1 238 THR . 1 239 GLU . 1 240 ILE . 1 241 LYS . 1 242 VAL . 1 243 ASP . 1 244 VAL . 1 245 CYS . 1 246 LYS . 1 247 ARG . 1 248 VAL . 1 249 ASN . 1 250 LEU . 1 251 ASP . 1 252 ILE . 1 253 THR . 1 254 THR . 1 255 LEU . 1 256 ILE . 1 257 THR . 1 258 TYR . 1 259 VAL . 1 260 SER . 1 261 ALA . 1 262 LEU . 1 263 SER . 1 264 TYR . 1 265 GLY . 1 266 GLY . 1 267 CYS . 1 268 HIS . 1 269 PHE . 1 270 ILE . 1 271 PHE . 1 272 LYS . 1 273 GLU . 1 274 LYS . 1 275 VAL . 1 276 LEU . 1 277 THR . 1 278 GLU . 1 279 GLN . 1 280 ALA . 1 281 GLU . 1 282 GLN . 1 283 GLU . 1 284 ARG . 1 285 LYS . 1 286 GLU . 1 287 GLN . 1 288 VAL . 1 289 LEU . 1 290 PRO . 1 291 GLN . 1 292 LEU . 1 293 GLU . 1 294 ALA . 1 295 PHE . 1 296 MET . 1 297 LYS . 1 298 ASP . 1 299 LYS . 1 300 GLU . 1 301 LEU . 1 302 PHE . 1 303 ALA . 1 304 CYS . 1 305 GLU . 1 306 SER . 1 307 ALA . 1 308 VAL . 1 309 LYS . 1 310 ASP . 1 311 PHE . 1 312 GLN . 1 313 SER . 1 314 ILE . 1 315 LEU . 1 316 ASP . 1 317 THR . 1 318 LEU . 1 319 GLY . 1 320 GLY . 1 321 PRO . 1 322 GLY . 1 323 GLU . 1 324 ARG . 1 325 GLU . 1 326 ARG . 1 327 ALA . 1 328 THR . 1 329 VAL . 1 330 LEU . 1 331 ILE . 1 332 LYS . 1 333 ARG . 1 334 ILE . 1 335 ASN . 1 336 VAL . 1 337 VAL . 1 338 PRO . 1 339 ASP . 1 340 GLN . 1 341 PRO . 1 342 SER . 1 343 GLU . 1 344 ARG . 1 345 ALA . 1 346 LEU . 1 347 ARG . 1 348 LEU . 1 349 VAL . 1 350 ALA . 1 351 SER . 1 352 SER . 1 353 LYS . 1 354 ILE . 1 355 ASN . 1 356 SER . 1 357 ARG . 1 358 SER . 1 359 LEU . 1 360 THR . 1 361 ILE . 1 362 PHE . 1 363 GLY . 1 364 THR . 1 365 GLY . 1 366 ASP . 1 367 THR . 1 368 LEU . 1 369 LYS . 1 370 ALA . 1 371 ILE . 1 372 THR . 1 373 MET . 1 374 THR . 1 375 ALA . 1 376 ASN . 1 377 SER . 1 378 GLY . 1 379 PHE . 1 380 VAL . 1 381 ARG . 1 382 ALA . 1 383 ALA . 1 384 ASN . 1 385 ASN . 1 386 GLN . 1 387 GLY . 1 388 VAL . 1 389 LYS . 1 390 PHE . 1 391 SER . 1 392 VAL . 1 393 PHE . 1 394 ILE . 1 395 HIS . 1 396 GLN . 1 397 PRO . 1 398 ARG . 1 399 ALA . 1 400 LEU . 1 401 THR . 1 402 GLU . 1 403 SER . 1 404 LYS . 1 405 GLU . 1 406 ALA . 1 407 LEU . 1 408 ALA . 1 409 THR . 1 410 PRO . 1 411 LEU . 1 412 PRO . 1 413 LYS . 1 414 ASP . 1 415 TYR . 1 416 THR . 1 417 THR . 1 418 ASP . 1 419 SER . 1 420 GLU . 1 421 HIS . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? E . A 1 2 SER 2 ? ? ? E . A 1 3 ALA 3 ? ? ? E . A 1 4 HIS 4 ? ? ? E . A 1 5 SER 5 ? ? ? E . A 1 6 MET 6 6 MET MET E . A 1 7 LEU 7 7 LEU LEU E . A 1 8 CYS 8 8 CYS CYS E . A 1 9 GLU 9 9 GLU GLU E . A 1 10 ARG 10 10 ARG ARG E . A 1 11 ILE 11 11 ILE ILE E . A 1 12 ALA 12 12 ALA ALA E . A 1 13 ILE 13 13 ILE ILE E . A 1 14 ALA 14 14 ALA ALA E . A 1 15 LYS 15 15 LYS LYS E . A 1 16 GLU 16 16 GLU GLU E . A 1 17 LEU 17 17 LEU LEU E . A 1 18 ILE 18 18 ILE ILE E . A 1 19 LYS 19 19 LYS LYS E . A 1 20 ARG 20 20 ARG ARG E . A 1 21 ALA 21 21 ALA ALA E . A 1 22 GLU 22 ? ? ? E . A 1 23 SER 23 ? ? ? E . A 1 24 LEU 24 ? ? ? E . A 1 25 SER 25 ? ? ? E . A 1 26 ARG 26 ? ? ? E . A 1 27 SER 27 ? ? ? E . A 1 28 ARG 28 ? ? ? E . A 1 29 LYS 29 ? ? ? E . A 1 30 GLY 30 ? ? ? E . A 1 31 GLY 31 ? ? ? E . A 1 32 ILE 32 ? ? ? E . A 1 33 GLU 33 ? ? ? E . A 1 34 GLY 34 ? ? ? E . A 1 35 GLY 35 ? ? ? E . A 1 36 ALA 36 ? ? ? E . A 1 37 LYS 37 ? ? ? E . A 1 38 LEU 38 ? ? ? E . A 1 39 CYS 39 ? ? ? E . A 1 40 SER 40 ? ? ? E . A 1 41 LYS 41 ? ? ? E . A 1 42 LEU 42 ? ? ? E . A 1 43 LYS 43 ? ? ? E . A 1 44 ALA 44 ? ? ? E . A 1 45 GLU 45 ? ? ? E . A 1 46 LEU 46 ? ? ? E . A 1 47 LYS 47 ? ? ? E . A 1 48 PHE 48 ? ? ? E . A 1 49 LEU 49 ? ? ? E . A 1 50 GLN 50 ? ? ? E . A 1 51 LYS 51 ? ? ? E . A 1 52 VAL 52 ? ? ? E . A 1 53 GLU 53 ? ? ? E . A 1 54 ALA 54 ? ? ? E . A 1 55 GLY 55 ? ? ? E . A 1 56 LYS 56 ? ? ? E . A 1 57 VAL 57 ? ? ? E . A 1 58 ALA 58 ? ? ? E . A 1 59 ILE 59 ? ? ? E . A 1 60 LYS 60 ? ? ? E . A 1 61 GLU 61 ? ? ? E . A 1 62 SER 62 ? ? ? E . A 1 63 HIS 63 ? ? ? E . A 1 64 LEU 64 ? ? ? E . A 1 65 GLN 65 ? ? ? E . A 1 66 SER 66 ? ? ? E . A 1 67 THR 67 ? ? ? E . A 1 68 ASN 68 ? ? ? E . A 1 69 LEU 69 ? ? ? E . A 1 70 THR 70 ? ? ? E . A 1 71 HIS 71 ? ? ? E . A 1 72 LEU 72 ? ? ? E . A 1 73 ARG 73 ? ? ? E . A 1 74 ALA 74 ? ? ? E . A 1 75 ILE 75 ? ? ? E . A 1 76 VAL 76 ? ? ? E . A 1 77 GLU 77 ? ? ? E . A 1 78 SER 78 ? ? ? E . A 1 79 ALA 79 ? ? ? E . A 1 80 GLU 80 ? ? ? E . A 1 81 ASN 81 ? ? ? E . A 1 82 LEU 82 ? ? ? E . A 1 83 GLU 83 ? ? ? E . A 1 84 GLU 84 ? ? ? E . A 1 85 VAL 85 ? ? ? E . A 1 86 VAL 86 ? ? ? E . A 1 87 SER 87 ? ? ? E . A 1 88 VAL 88 ? ? ? E . A 1 89 LEU 89 ? ? ? E . A 1 90 HIS 90 ? ? ? E . A 1 91 VAL 91 ? ? ? E . A 1 92 PHE 92 ? ? ? E . A 1 93 GLY 93 ? ? ? E . A 1 94 TYR 94 ? ? ? E . A 1 95 THR 95 ? ? ? E . A 1 96 ASP 96 ? ? ? E . A 1 97 THR 97 ? ? ? E . A 1 98 LEU 98 ? ? ? E . A 1 99 GLY 99 ? ? ? E . A 1 100 GLU 100 ? ? ? E . A 1 101 LYS 101 ? ? ? E . A 1 102 GLN 102 ? ? ? E . A 1 103 THR 103 ? ? ? E . A 1 104 LEU 104 ? ? ? E . A 1 105 VAL 105 ? ? ? E . A 1 106 VAL 106 ? ? ? E . A 1 107 ASP 107 ? ? ? E . A 1 108 VAL 108 ? ? ? E . A 1 109 VAL 109 ? ? ? E . A 1 110 ALA 110 ? ? ? E . A 1 111 ASN 111 ? ? ? E . A 1 112 GLY 112 ? ? ? E . A 1 113 GLY 113 ? ? ? E . A 1 114 HIS 114 ? ? ? E . A 1 115 THR 115 ? ? ? E . A 1 116 TRP 116 ? ? ? E . A 1 117 VAL 117 ? ? ? E . A 1 118 LYS 118 ? ? ? E . A 1 119 ALA 119 ? ? ? E . A 1 120 ILE 120 ? ? ? E . A 1 121 GLY 121 ? ? ? E . A 1 122 ARG 122 ? ? ? E . A 1 123 LYS 123 ? ? ? E . A 1 124 ALA 124 ? ? ? E . A 1 125 GLU 125 ? ? ? E . A 1 126 ALA 126 ? ? ? E . A 1 127 LEU 127 ? ? ? E . A 1 128 HIS 128 ? ? ? E . A 1 129 ASN 129 ? ? ? E . A 1 130 ILE 130 ? ? ? E . A 1 131 TRP 131 ? ? ? E . A 1 132 LEU 132 ? ? ? E . A 1 133 GLY 133 ? ? ? E . A 1 134 ARG 134 ? ? ? E . A 1 135 GLY 135 ? ? ? E . A 1 136 GLN 136 ? ? ? E . A 1 137 TYR 137 ? ? ? E . A 1 138 GLY 138 ? ? ? E . A 1 139 ASP 139 ? ? ? E . A 1 140 LYS 140 ? ? ? E . A 1 141 SER 141 ? ? ? E . A 1 142 ILE 142 ? ? ? E . A 1 143 ILE 143 ? ? ? E . A 1 144 GLU 144 ? ? ? E . A 1 145 GLN 145 ? ? ? E . A 1 146 ALA 146 ? ? ? E . A 1 147 GLU 147 ? ? ? E . A 1 148 ASP 148 ? ? ? E . A 1 149 PHE 149 ? ? ? E . A 1 150 LEU 150 ? ? ? E . A 1 151 GLN 151 ? ? ? E . A 1 152 ALA 152 ? ? ? E . A 1 153 SER 153 ? ? ? E . A 1 154 HIS 154 ? ? ? E . A 1 155 GLN 155 ? ? ? E . A 1 156 GLN 156 ? ? ? E . A 1 157 PRO 157 ? ? ? E . A 1 158 VAL 158 ? ? ? E . A 1 159 GLN 159 ? ? ? E . A 1 160 TYR 160 ? ? ? E . A 1 161 SER 161 ? ? ? E . A 1 162 ASN 162 ? ? ? E . A 1 163 PRO 163 ? ? ? E . A 1 164 HIS 164 ? ? ? E . A 1 165 ILE 165 ? ? ? E . A 1 166 ILE 166 ? ? ? E . A 1 167 PHE 167 ? ? ? E . A 1 168 ALA 168 ? ? ? E . A 1 169 PHE 169 ? ? ? E . A 1 170 TYR 170 ? ? ? E . A 1 171 ASN 171 ? ? ? E . A 1 172 SER 172 ? ? ? E . A 1 173 VAL 173 ? ? ? E . A 1 174 SER 174 ? ? ? E . A 1 175 SER 175 ? ? ? E . A 1 176 PRO 176 ? ? ? E . A 1 177 MET 177 ? ? ? E . A 1 178 ALA 178 ? ? ? E . A 1 179 GLU 179 ? ? ? E . A 1 180 LYS 180 ? ? ? E . A 1 181 LEU 181 ? ? ? E . A 1 182 LYS 182 ? ? ? E . A 1 183 GLU 183 ? ? ? E . A 1 184 MET 184 ? ? ? E . A 1 185 GLY 185 ? ? ? E . A 1 186 ILE 186 ? ? ? E . A 1 187 SER 187 ? ? ? E . A 1 188 VAL 188 ? ? ? E . A 1 189 ARG 189 ? ? ? E . A 1 190 GLY 190 ? ? ? E . A 1 191 ASP 191 ? ? ? E . A 1 192 ILE 192 ? ? ? E . A 1 193 VAL 193 ? ? ? E . A 1 194 ALA 194 ? ? ? E . A 1 195 VAL 195 ? ? ? E . A 1 196 ASN 196 ? ? ? E . A 1 197 ALA 197 ? ? ? E . A 1 198 LEU 198 ? ? ? E . A 1 199 LEU 199 ? ? ? E . A 1 200 ASP 200 ? ? ? E . A 1 201 HIS 201 ? ? ? E . A 1 202 PRO 202 ? ? ? E . A 1 203 GLU 203 ? ? ? E . A 1 204 GLU 204 ? ? ? E . A 1 205 LEU 205 ? ? ? E . A 1 206 GLN 206 ? ? ? E . A 1 207 PRO 207 ? ? ? E . A 1 208 SER 208 ? ? ? E . A 1 209 GLU 209 ? ? ? E . A 1 210 SER 210 ? ? ? E . A 1 211 GLU 211 ? ? ? E . A 1 212 SER 212 ? ? ? E . A 1 213 ASP 213 ? ? ? E . A 1 214 ASP 214 ? ? ? E . A 1 215 GLU 215 ? ? ? E . A 1 216 GLY 216 ? ? ? E . A 1 217 PRO 217 ? ? ? E . A 1 218 GLU 218 ? ? ? E . A 1 219 LEU 219 ? ? ? E . A 1 220 LEU 220 ? ? ? E . A 1 221 GLN 221 ? ? ? E . A 1 222 VAL 222 ? ? ? E . A 1 223 THR 223 ? ? ? E . A 1 224 ARG 224 ? ? ? E . A 1 225 VAL 225 ? ? ? E . A 1 226 ASP 226 ? ? ? E . A 1 227 ARG 227 ? ? ? E . A 1 228 GLU 228 ? ? ? E . A 1 229 ASN 229 ? ? ? E . A 1 230 ILE 230 ? ? ? E . A 1 231 LEU 231 ? ? ? E . A 1 232 ALA 232 ? ? ? E . A 1 233 SER 233 ? ? ? E . A 1 234 VAL 234 ? ? ? E . A 1 235 ALA 235 ? ? ? E . A 1 236 PHE 236 ? ? ? E . A 1 237 PRO 237 ? ? ? E . A 1 238 THR 238 ? ? ? E . A 1 239 GLU 239 ? ? ? E . A 1 240 ILE 240 ? ? ? E . A 1 241 LYS 241 ? ? ? E . A 1 242 VAL 242 ? ? ? E . A 1 243 ASP 243 ? ? ? E . A 1 244 VAL 244 ? ? ? E . A 1 245 CYS 245 ? ? ? E . A 1 246 LYS 246 ? ? ? E . A 1 247 ARG 247 ? ? ? E . A 1 248 VAL 248 ? ? ? E . A 1 249 ASN 249 ? ? ? E . A 1 250 LEU 250 ? ? ? E . A 1 251 ASP 251 ? ? ? E . A 1 252 ILE 252 ? ? ? E . A 1 253 THR 253 ? ? ? E . A 1 254 THR 254 ? ? ? E . A 1 255 LEU 255 ? ? ? E . A 1 256 ILE 256 ? ? ? E . A 1 257 THR 257 ? ? ? E . A 1 258 TYR 258 ? ? ? E . A 1 259 VAL 259 ? ? ? E . A 1 260 SER 260 ? ? ? E . A 1 261 ALA 261 ? ? ? E . A 1 262 LEU 262 ? ? ? E . A 1 263 SER 263 ? ? ? E . A 1 264 TYR 264 ? ? ? E . A 1 265 GLY 265 ? ? ? E . A 1 266 GLY 266 ? ? ? E . A 1 267 CYS 267 ? ? ? E . A 1 268 HIS 268 ? ? ? E . A 1 269 PHE 269 ? ? ? E . A 1 270 ILE 270 ? ? ? E . A 1 271 PHE 271 ? ? ? E . A 1 272 LYS 272 ? ? ? E . A 1 273 GLU 273 ? ? ? E . A 1 274 LYS 274 ? ? ? E . A 1 275 VAL 275 ? ? ? E . A 1 276 LEU 276 ? ? ? E . A 1 277 THR 277 ? ? ? E . A 1 278 GLU 278 ? ? ? E . A 1 279 GLN 279 ? ? ? E . A 1 280 ALA 280 ? ? ? E . A 1 281 GLU 281 ? ? ? E . A 1 282 GLN 282 ? ? ? E . A 1 283 GLU 283 ? ? ? E . A 1 284 ARG 284 ? ? ? E . A 1 285 LYS 285 ? ? ? E . A 1 286 GLU 286 ? ? ? E . A 1 287 GLN 287 ? ? ? E . A 1 288 VAL 288 ? ? ? E . A 1 289 LEU 289 ? ? ? E . A 1 290 PRO 290 ? ? ? E . A 1 291 GLN 291 ? ? ? E . A 1 292 LEU 292 ? ? ? E . A 1 293 GLU 293 ? ? ? E . A 1 294 ALA 294 ? ? ? E . A 1 295 PHE 295 ? ? ? E . A 1 296 MET 296 ? ? ? E . A 1 297 LYS 297 ? ? ? E . A 1 298 ASP 298 ? ? ? E . A 1 299 LYS 299 ? ? ? E . A 1 300 GLU 300 ? ? ? E . A 1 301 LEU 301 ? ? ? E . A 1 302 PHE 302 ? ? ? E . A 1 303 ALA 303 ? ? ? E . A 1 304 CYS 304 ? ? ? E . A 1 305 GLU 305 ? ? ? E . A 1 306 SER 306 ? ? ? E . A 1 307 ALA 307 ? ? ? E . A 1 308 VAL 308 ? ? ? E . A 1 309 LYS 309 ? ? ? E . A 1 310 ASP 310 ? ? ? E . A 1 311 PHE 311 ? ? ? E . A 1 312 GLN 312 ? ? ? E . A 1 313 SER 313 ? ? ? E . A 1 314 ILE 314 ? ? ? E . A 1 315 LEU 315 ? ? ? E . A 1 316 ASP 316 ? ? ? E . A 1 317 THR 317 ? ? ? E . A 1 318 LEU 318 ? ? ? E . A 1 319 GLY 319 ? ? ? E . A 1 320 GLY 320 ? ? ? E . A 1 321 PRO 321 ? ? ? E . A 1 322 GLY 322 ? ? ? E . A 1 323 GLU 323 ? ? ? E . A 1 324 ARG 324 ? ? ? E . A 1 325 GLU 325 ? ? ? E . A 1 326 ARG 326 ? ? ? E . A 1 327 ALA 327 ? ? ? E . A 1 328 THR 328 ? ? ? E . A 1 329 VAL 329 ? ? ? E . A 1 330 LEU 330 ? ? ? E . A 1 331 ILE 331 ? ? ? E . A 1 332 LYS 332 ? ? ? E . A 1 333 ARG 333 ? ? ? E . A 1 334 ILE 334 ? ? ? E . A 1 335 ASN 335 ? ? ? E . A 1 336 VAL 336 ? ? ? E . A 1 337 VAL 337 ? ? ? E . A 1 338 PRO 338 ? ? ? E . A 1 339 ASP 339 ? ? ? E . A 1 340 GLN 340 ? ? ? E . A 1 341 PRO 341 ? ? ? E . A 1 342 SER 342 ? ? ? E . A 1 343 GLU 343 ? ? ? E . A 1 344 ARG 344 ? ? ? E . A 1 345 ALA 345 ? ? ? E . A 1 346 LEU 346 ? ? ? E . A 1 347 ARG 347 ? ? ? E . A 1 348 LEU 348 ? ? ? E . A 1 349 VAL 349 ? ? ? E . A 1 350 ALA 350 ? ? ? E . A 1 351 SER 351 ? ? ? E . A 1 352 SER 352 ? ? ? E . A 1 353 LYS 353 ? ? ? E . A 1 354 ILE 354 ? ? ? E . A 1 355 ASN 355 ? ? ? E . A 1 356 SER 356 ? ? ? E . A 1 357 ARG 357 ? ? ? E . A 1 358 SER 358 ? ? ? E . A 1 359 LEU 359 ? ? ? E . A 1 360 THR 360 ? ? ? E . A 1 361 ILE 361 ? ? ? E . A 1 362 PHE 362 ? ? ? E . A 1 363 GLY 363 ? ? ? E . A 1 364 THR 364 ? ? ? E . A 1 365 GLY 365 ? ? ? E . A 1 366 ASP 366 ? ? ? E . A 1 367 THR 367 ? ? ? E . A 1 368 LEU 368 ? ? ? E . A 1 369 LYS 369 ? ? ? E . A 1 370 ALA 370 ? ? ? E . A 1 371 ILE 371 ? ? ? E . A 1 372 THR 372 ? ? ? E . A 1 373 MET 373 ? ? ? E . A 1 374 THR 374 ? ? ? E . A 1 375 ALA 375 ? ? ? E . A 1 376 ASN 376 ? ? ? E . A 1 377 SER 377 ? ? ? E . A 1 378 GLY 378 ? ? ? E . A 1 379 PHE 379 ? ? ? E . A 1 380 VAL 380 ? ? ? E . A 1 381 ARG 381 ? ? ? E . A 1 382 ALA 382 ? ? ? E . A 1 383 ALA 383 ? ? ? E . A 1 384 ASN 384 ? ? ? E . A 1 385 ASN 385 ? ? ? E . A 1 386 GLN 386 ? ? ? E . A 1 387 GLY 387 ? ? ? E . A 1 388 VAL 388 ? ? ? E . A 1 389 LYS 389 ? ? ? E . A 1 390 PHE 390 ? ? ? E . A 1 391 SER 391 ? ? ? E . A 1 392 VAL 392 ? ? ? E . A 1 393 PHE 393 ? ? ? E . A 1 394 ILE 394 ? ? ? E . A 1 395 HIS 395 ? ? ? E . A 1 396 GLN 396 ? ? ? E . A 1 397 PRO 397 ? ? ? E . A 1 398 ARG 398 ? ? ? E . A 1 399 ALA 399 ? ? ? E . A 1 400 LEU 400 ? ? ? E . A 1 401 THR 401 ? ? ? E . A 1 402 GLU 402 ? ? ? E . A 1 403 SER 403 ? ? ? E . A 1 404 LYS 404 ? ? ? E . A 1 405 GLU 405 ? ? ? E . A 1 406 ALA 406 ? ? ? E . A 1 407 LEU 407 ? ? ? E . A 1 408 ALA 408 ? ? ? E . A 1 409 THR 409 ? ? ? E . A 1 410 PRO 410 ? ? ? E . A 1 411 LEU 411 ? ? ? E . A 1 412 PRO 412 ? ? ? E . A 1 413 LYS 413 ? ? ? E . A 1 414 ASP 414 ? ? ? E . A 1 415 TYR 415 ? ? ? E . A 1 416 THR 416 ? ? ? E . A 1 417 THR 417 ? ? ? E . A 1 418 ASP 418 ? ? ? E . A 1 419 SER 419 ? ? ? E . A 1 420 GLU 420 ? ? ? E . A 1 421 HIS 421 ? ? ? E . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Mediator of RNA polymerase II transcription subunit 9 {PDB ID=6xp5, label_asym_id=E, auth_asym_id=I, SMTL ID=6xp5.1.E}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 6xp5, label_asym_id=E' 'target-template alignment' . 4 'model 2' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-14 6 PDB https://www.wwpdb.org . 2024-11-08 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A E 5 1 I # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;MTAPLPEGLTPDAVDTLTELSAIIKKLRAAQQQQAANPSSQAAAGGPGTTGAPGSQPSSSGPNATAAGGA IGTTSLPSSATTGPTPSNALHSVKELPATTDPIKHKLQRARAAVRLLGDMSRTMAQQEAELARLEERRRK QAAMLAKAQEEGARLSKGFGEVGETPVVLVETGDKMAME ; ;MTAPLPEGLTPDAVDTLTELSAIIKKLRAAQQQQAANPSSQAAAGGPGTTGAPGSQPSSSGPNATAAGGA IGTTSLPSSATTGPTPSNALHSVKELPATTDPIKHKLQRARAAVRLLGDMSRTMAQQEAELARLEERRRK QAAMLAKAQEEGARLSKGFGEVGETPVVLVETGDKMAME ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 102 150 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 6xp5 2024-05-15 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 421 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 421 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 57.000 14.286 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MSAHSMLCERIAIAKELIKRAESLSRSRKGGIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTNLTHLRAIVESAENLEEVVSVLHVFGYTDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDKSIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSVSSPMAEKLKEMGISVRGDIVAVNALLDHPEELQPSESESDDEGPELLQVTRVDRENILASVAFPTEIKVDVCKRVNLDITTLITYVSALSYGGCHFIFKEKVLTEQAEQERKEQVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERATVLIKRINVVPDQPSERALRLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEALATPLPKDYTTDSEH 2 1 2 -----PIKHKLQRARAAVRLLGDMSRTMAQQEAELARLEERRRKQAAMLAKAQE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 6xp5.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 2' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . MET 6 6 ? A 293.537 234.702 267.118 1 1 E MET 0.720 1 ATOM 2 C CA . MET 6 6 ? A 293.456 235.880 268.050 1 1 E MET 0.720 1 ATOM 3 C C . MET 6 6 ? A 292.684 235.672 269.353 1 1 E MET 0.720 1 ATOM 4 O O . MET 6 6 ? A 293.162 236.048 270.408 1 1 E MET 0.720 1 ATOM 5 C CB . MET 6 6 ? A 292.855 237.101 267.310 1 1 E MET 0.720 1 ATOM 6 C CG . MET 6 6 ? A 293.671 237.617 266.108 1 1 E MET 0.720 1 ATOM 7 S SD . MET 6 6 ? A 292.803 238.928 265.192 1 1 E MET 0.720 1 ATOM 8 C CE . MET 6 6 ? A 292.977 240.281 266.395 1 1 E MET 0.720 1 ATOM 9 N N . LEU 7 7 ? A 291.464 235.069 269.342 1 1 E LEU 0.780 1 ATOM 10 C CA . LEU 7 7 ? A 290.721 234.828 270.582 1 1 E LEU 0.780 1 ATOM 11 C C . LEU 7 7 ? A 291.456 233.948 271.595 1 1 E LEU 0.780 1 ATOM 12 O O . LEU 7 7 ? A 291.630 234.335 272.749 1 1 E LEU 0.780 1 ATOM 13 C CB . LEU 7 7 ? A 289.349 234.207 270.226 1 1 E LEU 0.780 1 ATOM 14 C CG . LEU 7 7 ? A 288.404 233.955 271.420 1 1 E LEU 0.780 1 ATOM 15 C CD1 . LEU 7 7 ? A 288.066 235.234 272.203 1 1 E LEU 0.780 1 ATOM 16 C CD2 . LEU 7 7 ? A 287.120 233.263 270.942 1 1 E LEU 0.780 1 ATOM 17 N N . CYS 8 8 ? A 292.001 232.795 271.160 1 1 E CYS 0.830 1 ATOM 18 C CA . CYS 8 8 ? A 292.806 231.900 271.982 1 1 E CYS 0.830 1 ATOM 19 C C . CYS 8 8 ? A 294.062 232.543 272.567 1 1 E CYS 0.830 1 ATOM 20 O O . CYS 8 8 ? A 294.409 232.312 273.714 1 1 E CYS 0.830 1 ATOM 21 C CB . CYS 8 8 ? A 293.191 230.629 271.185 1 1 E CYS 0.830 1 ATOM 22 S SG . CYS 8 8 ? A 291.718 229.684 270.668 1 1 E CYS 0.830 1 ATOM 23 N N . GLU 9 9 ? A 294.746 233.406 271.782 1 1 E GLU 0.770 1 ATOM 24 C CA . GLU 9 9 ? A 295.860 234.212 272.257 1 1 E GLU 0.770 1 ATOM 25 C C . GLU 9 9 ? A 295.463 235.195 273.357 1 1 E GLU 0.770 1 ATOM 26 O O . GLU 9 9 ? A 296.066 235.227 274.422 1 1 E GLU 0.770 1 ATOM 27 C CB . GLU 9 9 ? A 296.449 234.985 271.067 1 1 E GLU 0.770 1 ATOM 28 C CG . GLU 9 9 ? A 297.707 235.819 271.396 1 1 E GLU 0.770 1 ATOM 29 C CD . GLU 9 9 ? A 298.198 236.543 270.144 1 1 E GLU 0.770 1 ATOM 30 O OE1 . GLU 9 9 ? A 297.513 236.427 269.091 1 1 E GLU 0.770 1 ATOM 31 O OE2 . GLU 9 9 ? A 299.245 237.232 270.252 1 1 E GLU 0.770 1 ATOM 32 N N . ARG 10 10 ? A 294.358 235.959 273.170 1 1 E ARG 0.760 1 ATOM 33 C CA . ARG 10 10 ? A 293.827 236.858 274.187 1 1 E ARG 0.760 1 ATOM 34 C C . ARG 10 10 ? A 293.429 236.150 275.477 1 1 E ARG 0.760 1 ATOM 35 O O . ARG 10 10 ? A 293.683 236.630 276.574 1 1 E ARG 0.760 1 ATOM 36 C CB . ARG 10 10 ? A 292.581 237.638 273.691 1 1 E ARG 0.760 1 ATOM 37 C CG . ARG 10 10 ? A 292.897 238.717 272.639 1 1 E ARG 0.760 1 ATOM 38 C CD . ARG 10 10 ? A 291.733 239.683 272.388 1 1 E ARG 0.760 1 ATOM 39 N NE . ARG 10 10 ? A 290.580 238.887 271.833 1 1 E ARG 0.760 1 ATOM 40 C CZ . ARG 10 10 ? A 290.341 238.701 270.526 1 1 E ARG 0.760 1 ATOM 41 N NH1 . ARG 10 10 ? A 291.166 239.175 269.596 1 1 E ARG 0.760 1 ATOM 42 N NH2 . ARG 10 10 ? A 289.253 238.039 270.129 1 1 E ARG 0.760 1 ATOM 43 N N . ILE 11 11 ? A 292.795 234.964 275.350 1 1 E ILE 0.820 1 ATOM 44 C CA . ILE 11 11 ? A 292.472 234.096 276.470 1 1 E ILE 0.820 1 ATOM 45 C C . ILE 11 11 ? A 293.718 233.614 277.206 1 1 E ILE 0.820 1 ATOM 46 O O . ILE 11 11 ? A 293.777 233.670 278.426 1 1 E ILE 0.820 1 ATOM 47 C CB . ILE 11 11 ? A 291.643 232.896 276.008 1 1 E ILE 0.820 1 ATOM 48 C CG1 . ILE 11 11 ? A 290.246 233.347 275.526 1 1 E ILE 0.820 1 ATOM 49 C CG2 . ILE 11 11 ? A 291.484 231.861 277.143 1 1 E ILE 0.820 1 ATOM 50 C CD1 . ILE 11 11 ? A 289.484 232.240 274.788 1 1 E ILE 0.820 1 ATOM 51 N N . ALA 12 12 ? A 294.762 233.146 276.480 1 1 E ALA 0.840 1 ATOM 52 C CA . ALA 12 12 ? A 296.013 232.719 277.086 1 1 E ALA 0.840 1 ATOM 53 C C . ALA 12 12 ? A 296.725 233.852 277.820 1 1 E ALA 0.840 1 ATOM 54 O O . ALA 12 12 ? A 297.084 233.697 278.987 1 1 E ALA 0.840 1 ATOM 55 C CB . ALA 12 12 ? A 296.936 232.083 276.021 1 1 E ALA 0.840 1 ATOM 56 N N . ILE 13 13 ? A 296.834 235.046 277.205 1 1 E ILE 0.810 1 ATOM 57 C CA . ILE 13 13 ? A 297.398 236.251 277.810 1 1 E ILE 0.810 1 ATOM 58 C C . ILE 13 13 ? A 296.645 236.682 279.073 1 1 E ILE 0.810 1 ATOM 59 O O . ILE 13 13 ? A 297.232 236.966 280.105 1 1 E ILE 0.810 1 ATOM 60 C CB . ILE 13 13 ? A 297.438 237.404 276.800 1 1 E ILE 0.810 1 ATOM 61 C CG1 . ILE 13 13 ? A 298.417 237.069 275.649 1 1 E ILE 0.810 1 ATOM 62 C CG2 . ILE 13 13 ? A 297.852 238.736 277.476 1 1 E ILE 0.810 1 ATOM 63 C CD1 . ILE 13 13 ? A 298.305 238.020 274.450 1 1 E ILE 0.810 1 ATOM 64 N N . ALA 14 14 ? A 295.289 236.686 279.044 1 1 E ALA 0.820 1 ATOM 65 C CA . ALA 14 14 ? A 294.478 236.956 280.221 1 1 E ALA 0.820 1 ATOM 66 C C . ALA 14 14 ? A 294.701 235.928 281.338 1 1 E ALA 0.820 1 ATOM 67 O O . ALA 14 14 ? A 294.782 236.267 282.518 1 1 E ALA 0.820 1 ATOM 68 C CB . ALA 14 14 ? A 292.985 237.036 279.828 1 1 E ALA 0.820 1 ATOM 69 N N . LYS 15 15 ? A 294.852 234.639 280.971 1 1 E LYS 0.770 1 ATOM 70 C CA . LYS 15 15 ? A 295.249 233.551 281.867 1 1 E LYS 0.770 1 ATOM 71 C C . LYS 15 15 ? A 296.657 233.613 282.467 1 1 E LYS 0.770 1 ATOM 72 O O . LYS 15 15 ? A 296.875 233.042 283.547 1 1 E LYS 0.770 1 ATOM 73 C CB . LYS 15 15 ? A 295.096 232.146 281.247 1 1 E LYS 0.770 1 ATOM 74 C CG . LYS 15 15 ? A 293.643 231.741 281.022 1 1 E LYS 0.770 1 ATOM 75 C CD . LYS 15 15 ? A 293.594 230.361 280.363 1 1 E LYS 0.770 1 ATOM 76 C CE . LYS 15 15 ? A 292.172 229.898 280.067 1 1 E LYS 0.770 1 ATOM 77 N NZ . LYS 15 15 ? A 292.203 228.635 279.298 1 1 E LYS 0.770 1 ATOM 78 N N . GLU 16 16 ? A 297.629 234.221 281.765 1 1 E GLU 0.750 1 ATOM 79 C CA . GLU 16 16 ? A 298.958 234.576 282.251 1 1 E GLU 0.750 1 ATOM 80 C C . GLU 16 16 ? A 298.969 235.802 283.165 1 1 E GLU 0.750 1 ATOM 81 O O . GLU 16 16 ? A 299.708 235.868 284.144 1 1 E GLU 0.750 1 ATOM 82 C CB . GLU 16 16 ? A 299.893 234.833 281.052 1 1 E GLU 0.750 1 ATOM 83 C CG . GLU 16 16 ? A 300.210 233.545 280.258 1 1 E GLU 0.750 1 ATOM 84 C CD . GLU 16 16 ? A 301.063 233.814 279.019 1 1 E GLU 0.750 1 ATOM 85 O OE1 . GLU 16 16 ? A 301.340 235.002 278.714 1 1 E GLU 0.750 1 ATOM 86 O OE2 . GLU 16 16 ? A 301.442 232.807 278.364 1 1 E GLU 0.750 1 ATOM 87 N N . LEU 17 17 ? A 298.159 236.839 282.851 1 1 E LEU 0.760 1 ATOM 88 C CA . LEU 17 17 ? A 297.963 238.009 283.698 1 1 E LEU 0.760 1 ATOM 89 C C . LEU 17 17 ? A 297.264 237.720 285.030 1 1 E LEU 0.760 1 ATOM 90 O O . LEU 17 17 ? A 297.570 238.344 286.046 1 1 E LEU 0.760 1 ATOM 91 C CB . LEU 17 17 ? A 297.168 239.123 282.970 1 1 E LEU 0.760 1 ATOM 92 C CG . LEU 17 17 ? A 297.911 239.784 281.791 1 1 E LEU 0.760 1 ATOM 93 C CD1 . LEU 17 17 ? A 296.962 240.730 281.041 1 1 E LEU 0.760 1 ATOM 94 C CD2 . LEU 17 17 ? A 299.181 240.531 282.234 1 1 E LEU 0.760 1 ATOM 95 N N . ILE 18 18 ? A 296.278 236.790 285.024 1 1 E ILE 0.640 1 ATOM 96 C CA . ILE 18 18 ? A 295.624 236.209 286.201 1 1 E ILE 0.640 1 ATOM 97 C C . ILE 18 18 ? A 296.541 235.160 286.860 1 1 E ILE 0.640 1 ATOM 98 O O . ILE 18 18 ? A 297.704 235.010 286.494 1 1 E ILE 0.640 1 ATOM 99 C CB . ILE 18 18 ? A 294.190 235.706 285.899 1 1 E ILE 0.640 1 ATOM 100 C CG1 . ILE 18 18 ? A 293.173 235.733 287.072 1 1 E ILE 0.640 1 ATOM 101 C CG2 . ILE 18 18 ? A 294.197 234.296 285.272 1 1 E ILE 0.640 1 ATOM 102 C CD1 . ILE 18 18 ? A 292.766 237.155 287.457 1 1 E ILE 0.640 1 ATOM 103 N N . LYS 19 19 ? A 296.088 234.478 287.937 1 1 E LYS 0.310 1 ATOM 104 C CA . LYS 19 19 ? A 296.827 233.439 288.665 1 1 E LYS 0.310 1 ATOM 105 C C . LYS 19 19 ? A 297.962 233.997 289.506 1 1 E LYS 0.310 1 ATOM 106 O O . LYS 19 19 ? A 298.868 233.283 289.920 1 1 E LYS 0.310 1 ATOM 107 C CB . LYS 19 19 ? A 297.341 232.225 287.821 1 1 E LYS 0.310 1 ATOM 108 C CG . LYS 19 19 ? A 296.238 231.446 287.092 1 1 E LYS 0.310 1 ATOM 109 C CD . LYS 19 19 ? A 296.781 230.249 286.291 1 1 E LYS 0.310 1 ATOM 110 C CE . LYS 19 19 ? A 295.675 229.601 285.463 1 1 E LYS 0.310 1 ATOM 111 N NZ . LYS 19 19 ? A 296.240 228.454 284.728 1 1 E LYS 0.310 1 ATOM 112 N N . ARG 20 20 ? A 297.901 235.308 289.799 1 1 E ARG 0.370 1 ATOM 113 C CA . ARG 20 20 ? A 298.841 235.997 290.660 1 1 E ARG 0.370 1 ATOM 114 C C . ARG 20 20 ? A 298.749 235.573 292.119 1 1 E ARG 0.370 1 ATOM 115 O O . ARG 20 20 ? A 299.770 235.445 292.800 1 1 E ARG 0.370 1 ATOM 116 C CB . ARG 20 20 ? A 298.627 237.528 290.573 1 1 E ARG 0.370 1 ATOM 117 C CG . ARG 20 20 ? A 298.998 238.152 289.214 1 1 E ARG 0.370 1 ATOM 118 C CD . ARG 20 20 ? A 298.746 239.662 289.212 1 1 E ARG 0.370 1 ATOM 119 N NE . ARG 20 20 ? A 299.163 240.193 287.875 1 1 E ARG 0.370 1 ATOM 120 C CZ . ARG 20 20 ? A 298.959 241.466 287.498 1 1 E ARG 0.370 1 ATOM 121 N NH1 . ARG 20 20 ? A 298.393 242.349 288.321 1 1 E ARG 0.370 1 ATOM 122 N NH2 . ARG 20 20 ? A 299.304 241.860 286.277 1 1 E ARG 0.370 1 ATOM 123 N N . ALA 21 21 ? A 297.527 235.370 292.629 1 1 E ALA 0.400 1 ATOM 124 C CA . ALA 21 21 ? A 297.274 234.944 293.973 1 1 E ALA 0.400 1 ATOM 125 C C . ALA 21 21 ? A 295.800 234.456 293.988 1 1 E ALA 0.400 1 ATOM 126 O O . ALA 21 21 ? A 295.118 234.604 292.932 1 1 E ALA 0.400 1 ATOM 127 C CB . ALA 21 21 ? A 297.467 236.113 294.968 1 1 E ALA 0.400 1 ATOM 128 O OXT . ALA 21 21 ? A 295.349 233.934 295.045 1 1 E ALA 0.400 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.697 2 1 3 0.000454 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 6 MET 1 0.720 2 1 A 7 LEU 1 0.780 3 1 A 8 CYS 1 0.830 4 1 A 9 GLU 1 0.770 5 1 A 10 ARG 1 0.760 6 1 A 11 ILE 1 0.820 7 1 A 12 ALA 1 0.840 8 1 A 13 ILE 1 0.810 9 1 A 14 ALA 1 0.820 10 1 A 15 LYS 1 0.770 11 1 A 16 GLU 1 0.750 12 1 A 17 LEU 1 0.760 13 1 A 18 ILE 1 0.640 14 1 A 19 LYS 1 0.310 15 1 A 20 ARG 1 0.370 16 1 A 21 ALA 1 0.400 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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