data_SMR-db7b8e729d013a494f7e1fb15f213080_2 _entry.id SMR-db7b8e729d013a494f7e1fb15f213080_2 _struct.entry_id SMR-db7b8e729d013a494f7e1fb15f213080_2 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - A0A2K5PJI7/ A0A2K5PJI7_CEBIM, YY1 associated factor 2 - A0A2R9AZB3/ A0A2R9AZB3_PANPA, YY1 associated factor 2 - A0A6D2YCH6/ A0A6D2YCH6_PANTR, YAF2 isoform 9 - A0A6J3FG53/ A0A6J3FG53_SAPAP, YY1-associated factor 2 isoform X1 - F7GJE4/ F7GJE4_CALJA, YY1-associated factor 2 isoform 1 - G1S8G1/ G1S8G1_NOMLE, YY1 associated factor 2 - H2Q5Q7/ H2Q5Q7_PANTR, YY1 associated factor 2 - Q8IY57/ YAF2_HUMAN, YY1-associated factor 2 Estimated model accuracy of this model is 0.109, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries A0A2K5PJI7, A0A2R9AZB3, A0A6D2YCH6, A0A6J3FG53, F7GJE4, G1S8G1, H2Q5Q7, Q8IY57' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 26246.732 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP F7GJE4_CALJA F7GJE4 1 ;MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKF PISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHL EVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH ; 'YY1-associated factor 2 isoform 1' 2 1 UNP A0A2K5PJI7_CEBIM A0A2K5PJI7 1 ;MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKF PISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHL EVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH ; 'YY1 associated factor 2' 3 1 UNP H2Q5Q7_PANTR H2Q5Q7 1 ;MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKF PISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHL EVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH ; 'YY1 associated factor 2' 4 1 UNP A0A6D2YCH6_PANTR A0A6D2YCH6 1 ;MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKF PISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHL EVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH ; 'YAF2 isoform 9' 5 1 UNP A0A2R9AZB3_PANPA A0A2R9AZB3 1 ;MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKF PISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHL EVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH ; 'YY1 associated factor 2' 6 1 UNP G1S8G1_NOMLE G1S8G1 1 ;MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKF PISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHL EVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH ; 'YY1 associated factor 2' 7 1 UNP A0A6J3FG53_SAPAP A0A6J3FG53 1 ;MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKF PISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHL EVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH ; 'YY1-associated factor 2 isoform X1' 8 1 UNP YAF2_HUMAN Q8IY57 1 ;MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKF PISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHL EVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH ; 'YY1-associated factor 2' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 204 1 204 2 2 1 204 1 204 3 3 1 204 1 204 4 4 1 204 1 204 5 5 1 204 1 204 6 6 1 204 1 204 7 7 1 204 1 204 8 8 1 204 1 204 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . F7GJE4_CALJA F7GJE4 . 1 204 9483 'Callithrix jacchus (White-tufted-ear marmoset)' 2018-06-20 16C4D290C18BD880 1 UNP . A0A2K5PJI7_CEBIM A0A2K5PJI7 . 1 204 2715852 'Cebus imitator (Panamanian white-faced capuchin) (Cebus capucinusimitator)' 2018-03-28 16C4D290C18BD880 1 UNP . H2Q5Q7_PANTR H2Q5Q7 . 1 204 9598 'Pan troglodytes (Chimpanzee)' 2012-03-21 16C4D290C18BD880 1 UNP . A0A6D2YCH6_PANTR A0A6D2YCH6 . 1 204 9598 'Pan troglodytes (Chimpanzee)' 2020-06-17 16C4D290C18BD880 1 UNP . A0A2R9AZB3_PANPA A0A2R9AZB3 . 1 204 9597 'Pan paniscus (Pygmy chimpanzee) (Bonobo)' 2018-06-20 16C4D290C18BD880 1 UNP . G1S8G1_NOMLE G1S8G1 . 1 204 61853 'Nomascus leucogenys (Northern white-cheeked gibbon) (Hylobates leucogenys)' 2011-10-19 16C4D290C18BD880 1 UNP . A0A6J3FG53_SAPAP A0A6J3FG53 . 1 204 9515 'Sapajus apella (Brown-capped capuchin) (Cebus apella)' 2020-10-07 16C4D290C18BD880 1 UNP . YAF2_HUMAN Q8IY57 Q8IY57-5 1 204 9606 'Homo sapiens (Human)' 2008-11-25 16C4D290C18BD880 # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no B ;MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKF PISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHL EVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH ; ;MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKF PISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHL EVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 GLY . 1 3 ASP . 1 4 LYS . 1 5 LYS . 1 6 SER . 1 7 PRO . 1 8 THR . 1 9 ARG . 1 10 PRO . 1 11 LYS . 1 12 ARG . 1 13 GLN . 1 14 PRO . 1 15 LYS . 1 16 PRO . 1 17 SER . 1 18 SER . 1 19 ASP . 1 20 GLU . 1 21 GLY . 1 22 TYR . 1 23 TRP . 1 24 ASP . 1 25 CYS . 1 26 SER . 1 27 VAL . 1 28 CYS . 1 29 THR . 1 30 PHE . 1 31 ARG . 1 32 ASN . 1 33 SER . 1 34 ALA . 1 35 GLU . 1 36 ALA . 1 37 PHE . 1 38 LYS . 1 39 CYS . 1 40 MET . 1 41 MET . 1 42 CYS . 1 43 ASP . 1 44 VAL . 1 45 ARG . 1 46 LYS . 1 47 GLY . 1 48 THR . 1 49 SER . 1 50 THR . 1 51 ARG . 1 52 SER . 1 53 THR . 1 54 LEU . 1 55 PHE . 1 56 GLU . 1 57 VAL . 1 58 ILE . 1 59 VAL . 1 60 SER . 1 61 ALA . 1 62 SER . 1 63 ARG . 1 64 THR . 1 65 LYS . 1 66 GLU . 1 67 PRO . 1 68 LEU . 1 69 LYS . 1 70 PHE . 1 71 PRO . 1 72 ILE . 1 73 SER . 1 74 GLY . 1 75 ARG . 1 76 LYS . 1 77 PRO . 1 78 ARG . 1 79 PRO . 1 80 VAL . 1 81 SER . 1 82 GLN . 1 83 LEU . 1 84 VAL . 1 85 ALA . 1 86 GLN . 1 87 GLN . 1 88 VAL . 1 89 THR . 1 90 GLN . 1 91 GLN . 1 92 PHE . 1 93 VAL . 1 94 PRO . 1 95 PRO . 1 96 THR . 1 97 GLN . 1 98 SER . 1 99 LYS . 1 100 LYS . 1 101 GLU . 1 102 LYS . 1 103 LYS . 1 104 ASP . 1 105 LYS . 1 106 VAL . 1 107 GLU . 1 108 LYS . 1 109 GLU . 1 110 LYS . 1 111 SER . 1 112 GLU . 1 113 LYS . 1 114 GLU . 1 115 THR . 1 116 THR . 1 117 SER . 1 118 LYS . 1 119 LYS . 1 120 ASN . 1 121 SER . 1 122 HIS . 1 123 LYS . 1 124 LYS . 1 125 THR . 1 126 ARG . 1 127 PRO . 1 128 ARG . 1 129 LEU . 1 130 LYS . 1 131 ASN . 1 132 VAL . 1 133 ASP . 1 134 ARG . 1 135 SER . 1 136 SER . 1 137 ALA . 1 138 GLN . 1 139 HIS . 1 140 LEU . 1 141 GLU . 1 142 VAL . 1 143 THR . 1 144 VAL . 1 145 GLY . 1 146 ASP . 1 147 LEU . 1 148 THR . 1 149 VAL . 1 150 ILE . 1 151 ILE . 1 152 THR . 1 153 ASP . 1 154 PHE . 1 155 LYS . 1 156 GLU . 1 157 LYS . 1 158 THR . 1 159 LYS . 1 160 SER . 1 161 PRO . 1 162 PRO . 1 163 ALA . 1 164 SER . 1 165 SER . 1 166 ALA . 1 167 ALA . 1 168 SER . 1 169 ALA . 1 170 ASP . 1 171 GLN . 1 172 HIS . 1 173 SER . 1 174 GLN . 1 175 SER . 1 176 GLY . 1 177 SER . 1 178 SER . 1 179 SER . 1 180 ASP . 1 181 ASN . 1 182 THR . 1 183 GLU . 1 184 ARG . 1 185 GLY . 1 186 MET . 1 187 SER . 1 188 ARG . 1 189 SER . 1 190 SER . 1 191 SER . 1 192 PRO . 1 193 ARG . 1 194 GLY . 1 195 GLU . 1 196 ALA . 1 197 SER . 1 198 SER . 1 199 LEU . 1 200 ASN . 1 201 GLY . 1 202 GLU . 1 203 SER . 1 204 HIS . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? B . A 1 2 GLY 2 ? ? ? B . A 1 3 ASP 3 ? ? ? B . A 1 4 LYS 4 ? ? ? B . A 1 5 LYS 5 ? ? ? B . A 1 6 SER 6 ? ? ? B . A 1 7 PRO 7 ? ? ? B . A 1 8 THR 8 ? ? ? B . A 1 9 ARG 9 ? ? ? B . A 1 10 PRO 10 ? ? ? B . A 1 11 LYS 11 ? ? ? B . A 1 12 ARG 12 ? ? ? B . A 1 13 GLN 13 ? ? ? B . A 1 14 PRO 14 ? ? ? B . A 1 15 LYS 15 ? ? ? B . A 1 16 PRO 16 ? ? ? B . A 1 17 SER 17 ? ? ? B . A 1 18 SER 18 ? ? ? B . A 1 19 ASP 19 ? ? ? B . A 1 20 GLU 20 ? ? ? B . A 1 21 GLY 21 ? ? ? B . A 1 22 TYR 22 ? ? ? B . A 1 23 TRP 23 ? ? ? B . A 1 24 ASP 24 ? ? ? B . A 1 25 CYS 25 ? ? ? B . A 1 26 SER 26 ? ? ? B . A 1 27 VAL 27 ? ? ? B . A 1 28 CYS 28 ? ? ? B . A 1 29 THR 29 ? ? ? B . A 1 30 PHE 30 ? ? ? B . A 1 31 ARG 31 ? ? ? B . A 1 32 ASN 32 ? ? ? B . A 1 33 SER 33 ? ? ? B . A 1 34 ALA 34 ? ? ? B . A 1 35 GLU 35 ? ? ? B . A 1 36 ALA 36 ? ? ? B . A 1 37 PHE 37 ? ? ? B . A 1 38 LYS 38 ? ? ? B . A 1 39 CYS 39 ? ? ? B . A 1 40 MET 40 ? ? ? B . A 1 41 MET 41 ? ? ? B . A 1 42 CYS 42 ? ? ? B . A 1 43 ASP 43 ? ? ? B . A 1 44 VAL 44 ? ? ? B . A 1 45 ARG 45 ? ? ? B . A 1 46 LYS 46 ? ? ? B . A 1 47 GLY 47 ? ? ? B . A 1 48 THR 48 ? ? ? B . A 1 49 SER 49 ? ? ? B . A 1 50 THR 50 ? ? ? B . A 1 51 ARG 51 ? ? ? B . A 1 52 SER 52 ? ? ? B . A 1 53 THR 53 ? ? ? B . A 1 54 LEU 54 ? ? ? B . A 1 55 PHE 55 ? ? ? B . A 1 56 GLU 56 ? ? ? B . A 1 57 VAL 57 ? ? ? B . A 1 58 ILE 58 ? ? ? B . A 1 59 VAL 59 ? ? ? B . A 1 60 SER 60 ? ? ? B . A 1 61 ALA 61 ? ? ? B . A 1 62 SER 62 ? ? ? B . A 1 63 ARG 63 ? ? ? B . A 1 64 THR 64 ? ? ? B . A 1 65 LYS 65 ? ? ? B . A 1 66 GLU 66 ? ? ? B . A 1 67 PRO 67 ? ? ? B . A 1 68 LEU 68 ? ? ? B . A 1 69 LYS 69 ? ? ? B . A 1 70 PHE 70 ? ? ? B . A 1 71 PRO 71 ? ? ? B . A 1 72 ILE 72 ? ? ? B . A 1 73 SER 73 ? ? ? B . A 1 74 GLY 74 ? ? ? B . A 1 75 ARG 75 ? ? ? B . A 1 76 LYS 76 ? ? ? B . A 1 77 PRO 77 ? ? ? B . A 1 78 ARG 78 ? ? ? B . A 1 79 PRO 79 ? ? ? B . A 1 80 VAL 80 ? ? ? B . A 1 81 SER 81 ? ? ? B . A 1 82 GLN 82 ? ? ? B . A 1 83 LEU 83 ? ? ? B . A 1 84 VAL 84 ? ? ? B . A 1 85 ALA 85 ? ? ? B . A 1 86 GLN 86 ? ? ? B . A 1 87 GLN 87 ? ? ? B . A 1 88 VAL 88 ? ? ? B . A 1 89 THR 89 ? ? ? B . A 1 90 GLN 90 ? ? ? B . A 1 91 GLN 91 ? ? ? B . A 1 92 PHE 92 ? ? ? B . A 1 93 VAL 93 ? ? ? B . A 1 94 PRO 94 ? ? ? B . A 1 95 PRO 95 ? ? ? B . A 1 96 THR 96 ? ? ? B . A 1 97 GLN 97 ? ? ? B . A 1 98 SER 98 ? ? ? B . A 1 99 LYS 99 ? ? ? B . A 1 100 LYS 100 ? ? ? B . A 1 101 GLU 101 ? ? ? B . A 1 102 LYS 102 ? ? ? B . A 1 103 LYS 103 ? ? ? B . A 1 104 ASP 104 ? ? ? B . A 1 105 LYS 105 ? ? ? B . A 1 106 VAL 106 ? ? ? B . A 1 107 GLU 107 ? ? ? B . A 1 108 LYS 108 ? ? ? B . A 1 109 GLU 109 ? ? ? B . A 1 110 LYS 110 ? ? ? B . A 1 111 SER 111 ? ? ? B . A 1 112 GLU 112 ? ? ? B . A 1 113 LYS 113 ? ? ? B . A 1 114 GLU 114 ? ? ? B . A 1 115 THR 115 ? ? ? B . A 1 116 THR 116 ? ? ? B . A 1 117 SER 117 ? ? ? B . A 1 118 LYS 118 ? ? ? B . A 1 119 LYS 119 ? ? ? B . A 1 120 ASN 120 ? ? ? B . A 1 121 SER 121 ? ? ? B . A 1 122 HIS 122 ? ? ? B . A 1 123 LYS 123 ? ? ? B . A 1 124 LYS 124 ? ? ? B . A 1 125 THR 125 ? ? ? B . A 1 126 ARG 126 126 ARG ARG B . A 1 127 PRO 127 127 PRO PRO B . A 1 128 ARG 128 128 ARG ARG B . A 1 129 LEU 129 129 LEU LEU B . A 1 130 LYS 130 130 LYS LYS B . A 1 131 ASN 131 131 ASN ASN B . A 1 132 VAL 132 132 VAL VAL B . A 1 133 ASP 133 133 ASP ASP B . A 1 134 ARG 134 134 ARG ARG B . A 1 135 SER 135 135 SER SER B . A 1 136 SER 136 136 SER SER B . A 1 137 ALA 137 137 ALA ALA B . A 1 138 GLN 138 138 GLN GLN B . A 1 139 HIS 139 139 HIS HIS B . A 1 140 LEU 140 140 LEU LEU B . A 1 141 GLU 141 141 GLU GLU B . A 1 142 VAL 142 142 VAL VAL B . A 1 143 THR 143 143 THR THR B . A 1 144 VAL 144 144 VAL VAL B . A 1 145 GLY 145 145 GLY GLY B . A 1 146 ASP 146 146 ASP ASP B . A 1 147 LEU 147 147 LEU LEU B . A 1 148 THR 148 148 THR THR B . A 1 149 VAL 149 149 VAL VAL B . A 1 150 ILE 150 150 ILE ILE B . A 1 151 ILE 151 151 ILE ILE B . A 1 152 THR 152 152 THR THR B . A 1 153 ASP 153 153 ASP ASP B . A 1 154 PHE 154 154 PHE PHE B . A 1 155 LYS 155 155 LYS LYS B . A 1 156 GLU 156 156 GLU GLU B . A 1 157 LYS 157 157 LYS LYS B . A 1 158 THR 158 ? ? ? B . A 1 159 LYS 159 ? ? ? B . A 1 160 SER 160 ? ? ? B . A 1 161 PRO 161 ? ? ? B . A 1 162 PRO 162 ? ? ? B . A 1 163 ALA 163 ? ? ? B . A 1 164 SER 164 ? ? ? B . A 1 165 SER 165 ? ? ? B . A 1 166 ALA 166 ? ? ? B . A 1 167 ALA 167 ? ? ? B . A 1 168 SER 168 ? ? ? B . A 1 169 ALA 169 ? ? ? B . A 1 170 ASP 170 ? ? ? B . A 1 171 GLN 171 ? ? ? B . A 1 172 HIS 172 ? ? ? B . A 1 173 SER 173 ? ? ? B . A 1 174 GLN 174 ? ? ? B . A 1 175 SER 175 ? ? ? B . A 1 176 GLY 176 ? ? ? B . A 1 177 SER 177 ? ? ? B . A 1 178 SER 178 ? ? ? B . A 1 179 SER 179 ? ? ? B . A 1 180 ASP 180 ? ? ? B . A 1 181 ASN 181 ? ? ? B . A 1 182 THR 182 ? ? ? B . A 1 183 GLU 183 ? ? ? B . A 1 184 ARG 184 ? ? ? B . A 1 185 GLY 185 ? ? ? B . A 1 186 MET 186 ? ? ? B . A 1 187 SER 187 ? ? ? B . A 1 188 ARG 188 ? ? ? B . A 1 189 SER 189 ? ? ? B . A 1 190 SER 190 ? ? ? B . A 1 191 SER 191 ? ? ? B . A 1 192 PRO 192 ? ? ? B . A 1 193 ARG 193 ? ? ? B . A 1 194 GLY 194 ? ? ? B . A 1 195 GLU 195 ? ? ? B . A 1 196 ALA 196 ? ? ? B . A 1 197 SER 197 ? ? ? B . A 1 198 SER 198 ? ? ? B . A 1 199 LEU 199 ? ? ? B . A 1 200 ASN 200 ? ? ? B . A 1 201 GLY 201 ? ? ? B . A 1 202 GLU 202 ? ? ? B . A 1 203 SER 203 ? ? ? B . A 1 204 HIS 204 ? ? ? B . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'RING1 and YY1-binding protein {PDB ID=3ixs, label_asym_id=F, auth_asym_id=F, SMTL ID=3ixs.3.B}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 3ixs, label_asym_id=F' 'target-template alignment' . 4 'model 2' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-14 6 PDB https://www.wwpdb.org . 2024-11-08 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A F 2 1 F # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 GTRPRLKNVDRSTAQQLAVTVGNVTVIITDFKEKTRS GTRPRLKNVDRSTAQQLAVTVGNVTVIITDFKEKTRS # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 3 37 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 3ixs 2024-02-21 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 204 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 204 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 1.6e-19 82.857 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRSTLFEVIVSASRTKEPLKFPISGRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHLEVTVGDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH 2 1 2 -----------------------------------------------------------------------------------------------------------------------------RPRLKNVDRSTAQQLAVTVGNVTVIITDFKEKTRS-------------------------------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 3ixs.3' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 2' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . ARG 126 126 ? A 15.777 30.676 80.855 1 1 B ARG 0.510 1 ATOM 2 C CA . ARG 126 126 ? A 16.655 31.889 81.039 1 1 B ARG 0.510 1 ATOM 3 C C . ARG 126 126 ? A 18.024 31.711 80.396 1 1 B ARG 0.510 1 ATOM 4 O O . ARG 126 126 ? A 18.273 30.585 79.982 1 1 B ARG 0.510 1 ATOM 5 C CB . ARG 126 126 ? A 16.903 32.092 82.550 1 1 B ARG 0.510 1 ATOM 6 C CG . ARG 126 126 ? A 15.698 32.440 83.438 1 1 B ARG 0.510 1 ATOM 7 C CD . ARG 126 126 ? A 16.199 32.949 84.796 1 1 B ARG 0.510 1 ATOM 8 N NE . ARG 126 126 ? A 15.048 32.991 85.743 1 1 B ARG 0.510 1 ATOM 9 C CZ . ARG 126 126 ? A 15.176 33.406 87.012 1 1 B ARG 0.510 1 ATOM 10 N NH1 . ARG 126 126 ? A 16.326 33.899 87.464 1 1 B ARG 0.510 1 ATOM 11 N NH2 . ARG 126 126 ? A 14.148 33.313 87.851 1 1 B ARG 0.510 1 ATOM 12 N N . PRO 127 127 ? A 18.928 32.686 80.279 1 1 B PRO 0.650 1 ATOM 13 C CA . PRO 127 127 ? A 18.731 34.119 80.442 1 1 B PRO 0.650 1 ATOM 14 C C . PRO 127 127 ? A 18.387 34.656 79.068 1 1 B PRO 0.650 1 ATOM 15 O O . PRO 127 127 ? A 19.183 34.599 78.139 1 1 B PRO 0.650 1 ATOM 16 C CB . PRO 127 127 ? A 20.082 34.645 80.982 1 1 B PRO 0.650 1 ATOM 17 C CG . PRO 127 127 ? A 20.981 33.407 81.130 1 1 B PRO 0.650 1 ATOM 18 C CD . PRO 127 127 ? A 20.349 32.377 80.198 1 1 B PRO 0.650 1 ATOM 19 N N . ARG 128 128 ? A 17.150 35.140 78.905 1 1 B ARG 0.490 1 ATOM 20 C CA . ARG 128 128 ? A 16.612 35.490 77.620 1 1 B ARG 0.490 1 ATOM 21 C C . ARG 128 128 ? A 16.422 36.978 77.620 1 1 B ARG 0.490 1 ATOM 22 O O . ARG 128 128 ? A 16.033 37.566 78.627 1 1 B ARG 0.490 1 ATOM 23 C CB . ARG 128 128 ? A 15.244 34.796 77.391 1 1 B ARG 0.490 1 ATOM 24 C CG . ARG 128 128 ? A 15.388 33.291 77.094 1 1 B ARG 0.490 1 ATOM 25 C CD . ARG 128 128 ? A 14.082 32.496 77.176 1 1 B ARG 0.490 1 ATOM 26 N NE . ARG 128 128 ? A 13.130 33.046 76.163 1 1 B ARG 0.490 1 ATOM 27 C CZ . ARG 128 128 ? A 12.965 32.595 74.911 1 1 B ARG 0.490 1 ATOM 28 N NH1 . ARG 128 128 ? A 13.718 31.634 74.389 1 1 B ARG 0.490 1 ATOM 29 N NH2 . ARG 128 128 ? A 11.989 33.108 74.165 1 1 B ARG 0.490 1 ATOM 30 N N . LEU 129 129 ? A 16.694 37.612 76.467 1 1 B LEU 0.590 1 ATOM 31 C CA . LEU 129 129 ? A 16.329 38.984 76.190 1 1 B LEU 0.590 1 ATOM 32 C C . LEU 129 129 ? A 14.830 39.211 76.346 1 1 B LEU 0.590 1 ATOM 33 O O . LEU 129 129 ? A 14.018 38.446 75.810 1 1 B LEU 0.590 1 ATOM 34 C CB . LEU 129 129 ? A 16.733 39.359 74.746 1 1 B LEU 0.590 1 ATOM 35 C CG . LEU 129 129 ? A 18.227 39.183 74.412 1 1 B LEU 0.590 1 ATOM 36 C CD1 . LEU 129 129 ? A 18.440 39.144 72.890 1 1 B LEU 0.590 1 ATOM 37 C CD2 . LEU 129 129 ? A 19.067 40.295 75.055 1 1 B LEU 0.590 1 ATOM 38 N N . LYS 130 130 ? A 14.491 40.270 77.111 1 1 B LYS 0.560 1 ATOM 39 C CA . LYS 130 130 ? A 13.163 40.639 77.550 1 1 B LYS 0.560 1 ATOM 40 C C . LYS 130 130 ? A 12.521 41.739 76.708 1 1 B LYS 0.560 1 ATOM 41 O O . LYS 130 130 ? A 11.313 41.941 76.754 1 1 B LYS 0.560 1 ATOM 42 C CB . LYS 130 130 ? A 13.264 41.163 79.021 1 1 B LYS 0.560 1 ATOM 43 C CG . LYS 130 130 ? A 14.205 42.369 79.254 1 1 B LYS 0.560 1 ATOM 44 C CD . LYS 130 130 ? A 14.373 42.764 80.739 1 1 B LYS 0.560 1 ATOM 45 C CE . LYS 130 130 ? A 15.242 41.787 81.540 1 1 B LYS 0.560 1 ATOM 46 N NZ . LYS 130 130 ? A 15.475 42.293 82.915 1 1 B LYS 0.560 1 ATOM 47 N N . ASN 131 131 ? A 13.331 42.463 75.912 1 1 B ASN 0.680 1 ATOM 48 C CA . ASN 131 131 ? A 13.007 43.705 75.236 1 1 B ASN 0.680 1 ATOM 49 C C . ASN 131 131 ? A 13.010 43.558 73.715 1 1 B ASN 0.680 1 ATOM 50 O O . ASN 131 131 ? A 13.270 44.516 72.989 1 1 B ASN 0.680 1 ATOM 51 C CB . ASN 131 131 ? A 13.985 44.841 75.699 1 1 B ASN 0.680 1 ATOM 52 C CG . ASN 131 131 ? A 15.483 44.525 75.579 1 1 B ASN 0.680 1 ATOM 53 O OD1 . ASN 131 131 ? A 15.920 43.370 75.574 1 1 B ASN 0.680 1 ATOM 54 N ND2 . ASN 131 131 ? A 16.306 45.607 75.557 1 1 B ASN 0.680 1 ATOM 55 N N . VAL 132 132 ? A 12.773 42.330 73.208 1 1 B VAL 0.710 1 ATOM 56 C CA . VAL 132 132 ? A 12.890 42.020 71.801 1 1 B VAL 0.710 1 ATOM 57 C C . VAL 132 132 ? A 11.628 41.410 71.264 1 1 B VAL 0.710 1 ATOM 58 O O . VAL 132 132 ? A 11.031 40.507 71.863 1 1 B VAL 0.710 1 ATOM 59 C CB . VAL 132 132 ? A 14.060 41.091 71.445 1 1 B VAL 0.710 1 ATOM 60 C CG1 . VAL 132 132 ? A 15.379 41.775 71.841 1 1 B VAL 0.710 1 ATOM 61 C CG2 . VAL 132 132 ? A 13.949 39.675 72.058 1 1 B VAL 0.710 1 ATOM 62 N N . ASP 133 133 ? A 11.233 41.844 70.056 1 1 B ASP 0.740 1 ATOM 63 C CA . ASP 133 133 ? A 10.215 41.165 69.310 1 1 B ASP 0.740 1 ATOM 64 C C . ASP 133 133 ? A 10.801 39.854 68.793 1 1 B ASP 0.740 1 ATOM 65 O O . ASP 133 133 ? A 11.799 39.810 68.078 1 1 B ASP 0.740 1 ATOM 66 C CB . ASP 133 133 ? A 9.605 42.101 68.238 1 1 B ASP 0.740 1 ATOM 67 C CG . ASP 133 133 ? A 8.343 41.530 67.603 1 1 B ASP 0.740 1 ATOM 68 O OD1 . ASP 133 133 ? A 7.932 40.405 68.000 1 1 B ASP 0.740 1 ATOM 69 O OD2 . ASP 133 133 ? A 7.829 42.181 66.663 1 1 B ASP 0.740 1 ATOM 70 N N . ARG 134 134 ? A 10.210 38.728 69.226 1 1 B ARG 0.660 1 ATOM 71 C CA . ARG 134 134 ? A 10.585 37.401 68.813 1 1 B ARG 0.660 1 ATOM 72 C C . ARG 134 134 ? A 10.083 37.033 67.427 1 1 B ARG 0.660 1 ATOM 73 O O . ARG 134 134 ? A 10.631 36.117 66.818 1 1 B ARG 0.660 1 ATOM 74 C CB . ARG 134 134 ? A 10.096 36.352 69.842 1 1 B ARG 0.660 1 ATOM 75 C CG . ARG 134 134 ? A 10.769 36.468 71.225 1 1 B ARG 0.660 1 ATOM 76 C CD . ARG 134 134 ? A 12.233 36.041 71.189 1 1 B ARG 0.660 1 ATOM 77 N NE . ARG 134 134 ? A 12.777 36.234 72.566 1 1 B ARG 0.660 1 ATOM 78 C CZ . ARG 134 134 ? A 13.958 35.752 72.962 1 1 B ARG 0.660 1 ATOM 79 N NH1 . ARG 134 134 ? A 14.665 34.942 72.180 1 1 B ARG 0.660 1 ATOM 80 N NH2 . ARG 134 134 ? A 14.481 36.136 74.122 1 1 B ARG 0.660 1 ATOM 81 N N . SER 135 135 ? A 9.064 37.737 66.873 1 1 B SER 0.680 1 ATOM 82 C CA . SER 135 135 ? A 8.600 37.453 65.520 1 1 B SER 0.680 1 ATOM 83 C C . SER 135 135 ? A 9.467 38.133 64.473 1 1 B SER 0.680 1 ATOM 84 O O . SER 135 135 ? A 9.470 37.748 63.305 1 1 B SER 0.680 1 ATOM 85 C CB . SER 135 135 ? A 7.098 37.793 65.237 1 1 B SER 0.680 1 ATOM 86 O OG . SER 135 135 ? A 6.798 39.173 65.015 1 1 B SER 0.680 1 ATOM 87 N N . SER 136 136 ? A 10.293 39.125 64.902 1 1 B SER 0.760 1 ATOM 88 C CA . SER 136 136 ? A 11.148 39.894 64.007 1 1 B SER 0.760 1 ATOM 89 C C . SER 136 136 ? A 12.466 39.198 63.715 1 1 B SER 0.760 1 ATOM 90 O O . SER 136 136 ? A 13.277 39.702 62.942 1 1 B SER 0.760 1 ATOM 91 C CB . SER 136 136 ? A 11.417 41.392 64.406 1 1 B SER 0.760 1 ATOM 92 O OG . SER 136 136 ? A 12.326 41.587 65.496 1 1 B SER 0.760 1 ATOM 93 N N . ALA 137 137 ? A 12.665 37.992 64.301 1 1 B ALA 0.750 1 ATOM 94 C CA . ALA 137 137 ? A 13.857 37.169 64.223 1 1 B ALA 0.750 1 ATOM 95 C C . ALA 137 137 ? A 14.413 36.928 62.823 1 1 B ALA 0.750 1 ATOM 96 O O . ALA 137 137 ? A 13.846 36.191 62.014 1 1 B ALA 0.750 1 ATOM 97 C CB . ALA 137 137 ? A 13.615 35.809 64.918 1 1 B ALA 0.750 1 ATOM 98 N N . GLN 138 138 ? A 15.581 37.525 62.527 1 1 B GLN 0.640 1 ATOM 99 C CA . GLN 138 138 ? A 16.252 37.380 61.263 1 1 B GLN 0.640 1 ATOM 100 C C . GLN 138 138 ? A 17.430 36.490 61.552 1 1 B GLN 0.640 1 ATOM 101 O O . GLN 138 138 ? A 18.070 36.582 62.595 1 1 B GLN 0.640 1 ATOM 102 C CB . GLN 138 138 ? A 16.677 38.732 60.632 1 1 B GLN 0.640 1 ATOM 103 C CG . GLN 138 138 ? A 15.462 39.561 60.150 1 1 B GLN 0.640 1 ATOM 104 C CD . GLN 138 138 ? A 15.865 40.782 59.325 1 1 B GLN 0.640 1 ATOM 105 O OE1 . GLN 138 138 ? A 16.974 41.304 59.353 1 1 B GLN 0.640 1 ATOM 106 N NE2 . GLN 138 138 ? A 14.911 41.275 58.492 1 1 B GLN 0.640 1 ATOM 107 N N . HIS 139 139 ? A 17.698 35.539 60.643 1 1 B HIS 0.670 1 ATOM 108 C CA . HIS 139 139 ? A 18.759 34.579 60.818 1 1 B HIS 0.670 1 ATOM 109 C C . HIS 139 139 ? A 19.781 34.835 59.753 1 1 B HIS 0.670 1 ATOM 110 O O . HIS 139 139 ? A 19.432 35.015 58.586 1 1 B HIS 0.670 1 ATOM 111 C CB . HIS 139 139 ? A 18.308 33.115 60.605 1 1 B HIS 0.670 1 ATOM 112 C CG . HIS 139 139 ? A 17.110 32.753 61.403 1 1 B HIS 0.670 1 ATOM 113 N ND1 . HIS 139 139 ? A 17.232 32.752 62.771 1 1 B HIS 0.670 1 ATOM 114 C CD2 . HIS 139 139 ? A 15.835 32.458 61.041 1 1 B HIS 0.670 1 ATOM 115 C CE1 . HIS 139 139 ? A 16.035 32.468 63.222 1 1 B HIS 0.670 1 ATOM 116 N NE2 . HIS 139 139 ? A 15.146 32.275 62.219 1 1 B HIS 0.670 1 ATOM 117 N N . LEU 140 140 ? A 21.068 34.820 60.111 1 1 B LEU 0.710 1 ATOM 118 C CA . LEU 140 140 ? A 22.128 34.945 59.148 1 1 B LEU 0.710 1 ATOM 119 C C . LEU 140 140 ? A 23.213 33.940 59.498 1 1 B LEU 0.710 1 ATOM 120 O O . LEU 140 140 ? A 23.471 33.648 60.666 1 1 B LEU 0.710 1 ATOM 121 C CB . LEU 140 140 ? A 22.598 36.430 59.041 1 1 B LEU 0.710 1 ATOM 122 C CG . LEU 140 140 ? A 23.166 37.085 60.325 1 1 B LEU 0.710 1 ATOM 123 C CD1 . LEU 140 140 ? A 24.682 36.909 60.425 1 1 B LEU 0.710 1 ATOM 124 C CD2 . LEU 140 140 ? A 22.811 38.579 60.446 1 1 B LEU 0.710 1 ATOM 125 N N . GLU 141 141 ? A 23.844 33.323 58.476 1 1 B GLU 0.690 1 ATOM 126 C CA . GLU 141 141 ? A 24.935 32.387 58.640 1 1 B GLU 0.690 1 ATOM 127 C C . GLU 141 141 ? A 26.254 33.148 58.644 1 1 B GLU 0.690 1 ATOM 128 O O . GLU 141 141 ? A 26.447 34.092 57.878 1 1 B GLU 0.690 1 ATOM 129 C CB . GLU 141 141 ? A 24.893 31.272 57.552 1 1 B GLU 0.690 1 ATOM 130 C CG . GLU 141 141 ? A 25.110 31.696 56.076 1 1 B GLU 0.690 1 ATOM 131 C CD . GLU 141 141 ? A 25.068 30.508 55.105 1 1 B GLU 0.690 1 ATOM 132 O OE1 . GLU 141 141 ? A 25.423 30.722 53.918 1 1 B GLU 0.690 1 ATOM 133 O OE2 . GLU 141 141 ? A 24.678 29.392 55.537 1 1 B GLU 0.690 1 ATOM 134 N N . VAL 142 142 ? A 27.182 32.793 59.559 1 1 B VAL 0.710 1 ATOM 135 C CA . VAL 142 142 ? A 28.507 33.388 59.646 1 1 B VAL 0.710 1 ATOM 136 C C . VAL 142 142 ? A 29.503 32.269 59.717 1 1 B VAL 0.710 1 ATOM 137 O O . VAL 142 142 ? A 29.404 31.373 60.556 1 1 B VAL 0.710 1 ATOM 138 C CB . VAL 142 142 ? A 28.702 34.322 60.841 1 1 B VAL 0.710 1 ATOM 139 C CG1 . VAL 142 142 ? A 30.146 34.846 61.011 1 1 B VAL 0.710 1 ATOM 140 C CG2 . VAL 142 142 ? A 27.772 35.508 60.596 1 1 B VAL 0.710 1 ATOM 141 N N . THR 143 143 ? A 30.496 32.316 58.818 1 1 B THR 0.720 1 ATOM 142 C CA . THR 143 143 ? A 31.553 31.331 58.721 1 1 B THR 0.720 1 ATOM 143 C C . THR 143 143 ? A 32.867 31.990 59.044 1 1 B THR 0.720 1 ATOM 144 O O . THR 143 143 ? A 33.223 33.012 58.457 1 1 B THR 0.720 1 ATOM 145 C CB . THR 143 143 ? A 31.710 30.725 57.340 1 1 B THR 0.720 1 ATOM 146 O OG1 . THR 143 143 ? A 30.456 30.256 56.875 1 1 B THR 0.720 1 ATOM 147 C CG2 . THR 143 143 ? A 32.635 29.507 57.405 1 1 B THR 0.720 1 ATOM 148 N N . VAL 144 144 ? A 33.632 31.416 59.984 1 1 B VAL 0.730 1 ATOM 149 C CA . VAL 144 144 ? A 34.985 31.837 60.298 1 1 B VAL 0.730 1 ATOM 150 C C . VAL 144 144 ? A 35.822 30.570 60.265 1 1 B VAL 0.730 1 ATOM 151 O O . VAL 144 144 ? A 35.540 29.598 60.962 1 1 B VAL 0.730 1 ATOM 152 C CB . VAL 144 144 ? A 35.127 32.528 61.657 1 1 B VAL 0.730 1 ATOM 153 C CG1 . VAL 144 144 ? A 36.606 32.871 61.946 1 1 B VAL 0.730 1 ATOM 154 C CG2 . VAL 144 144 ? A 34.270 33.809 61.676 1 1 B VAL 0.730 1 ATOM 155 N N . GLY 145 145 ? A 36.876 30.519 59.422 1 1 B GLY 0.720 1 ATOM 156 C CA . GLY 145 145 ? A 37.589 29.275 59.122 1 1 B GLY 0.720 1 ATOM 157 C C . GLY 145 145 ? A 36.703 28.233 58.464 1 1 B GLY 0.720 1 ATOM 158 O O . GLY 145 145 ? A 36.096 28.511 57.432 1 1 B GLY 0.720 1 ATOM 159 N N . ASP 146 146 ? A 36.613 27.018 59.031 1 1 B ASP 0.710 1 ATOM 160 C CA . ASP 146 146 ? A 35.734 25.955 58.605 1 1 B ASP 0.710 1 ATOM 161 C C . ASP 146 146 ? A 34.502 25.853 59.527 1 1 B ASP 0.710 1 ATOM 162 O O . ASP 146 146 ? A 33.672 24.954 59.390 1 1 B ASP 0.710 1 ATOM 163 C CB . ASP 146 146 ? A 36.560 24.629 58.501 1 1 B ASP 0.710 1 ATOM 164 C CG . ASP 146 146 ? A 37.303 24.213 59.770 1 1 B ASP 0.710 1 ATOM 165 O OD1 . ASP 146 146 ? A 37.413 25.041 60.711 1 1 B ASP 0.710 1 ATOM 166 O OD2 . ASP 146 146 ? A 37.818 23.065 59.770 1 1 B ASP 0.710 1 ATOM 167 N N . LEU 147 147 ? A 34.311 26.817 60.464 1 1 B LEU 0.710 1 ATOM 168 C CA . LEU 147 147 ? A 33.219 26.785 61.415 1 1 B LEU 0.710 1 ATOM 169 C C . LEU 147 147 ? A 32.150 27.799 61.042 1 1 B LEU 0.710 1 ATOM 170 O O . LEU 147 147 ? A 32.390 29.004 60.954 1 1 B LEU 0.710 1 ATOM 171 C CB . LEU 147 147 ? A 33.696 27.055 62.863 1 1 B LEU 0.710 1 ATOM 172 C CG . LEU 147 147 ? A 32.589 27.017 63.942 1 1 B LEU 0.710 1 ATOM 173 C CD1 . LEU 147 147 ? A 31.910 25.642 64.064 1 1 B LEU 0.710 1 ATOM 174 C CD2 . LEU 147 147 ? A 33.143 27.480 65.297 1 1 B LEU 0.710 1 ATOM 175 N N . THR 148 148 ? A 30.917 27.297 60.846 1 1 B THR 0.700 1 ATOM 176 C CA . THR 148 148 ? A 29.736 28.063 60.476 1 1 B THR 0.700 1 ATOM 177 C C . THR 148 148 ? A 28.763 28.018 61.622 1 1 B THR 0.700 1 ATOM 178 O O . THR 148 148 ? A 28.433 26.945 62.129 1 1 B THR 0.700 1 ATOM 179 C CB . THR 148 148 ? A 28.969 27.502 59.281 1 1 B THR 0.700 1 ATOM 180 O OG1 . THR 148 148 ? A 29.799 27.397 58.139 1 1 B THR 0.700 1 ATOM 181 C CG2 . THR 148 148 ? A 27.817 28.419 58.852 1 1 B THR 0.700 1 ATOM 182 N N . VAL 149 149 ? A 28.260 29.187 62.053 1 1 B VAL 0.700 1 ATOM 183 C CA . VAL 149 149 ? A 27.236 29.313 63.070 1 1 B VAL 0.700 1 ATOM 184 C C . VAL 149 149 ? A 26.097 30.129 62.496 1 1 B VAL 0.700 1 ATOM 185 O O . VAL 149 149 ? A 26.272 30.911 61.561 1 1 B VAL 0.700 1 ATOM 186 C CB . VAL 149 149 ? A 27.707 29.950 64.386 1 1 B VAL 0.700 1 ATOM 187 C CG1 . VAL 149 149 ? A 28.755 29.033 65.046 1 1 B VAL 0.700 1 ATOM 188 C CG2 . VAL 149 149 ? A 28.247 31.383 64.188 1 1 B VAL 0.700 1 ATOM 189 N N . ILE 150 150 ? A 24.883 29.958 63.052 1 1 B ILE 0.740 1 ATOM 190 C CA . ILE 150 150 ? A 23.718 30.739 62.682 1 1 B ILE 0.740 1 ATOM 191 C C . ILE 150 150 ? A 23.514 31.725 63.805 1 1 B ILE 0.740 1 ATOM 192 O O . ILE 150 150 ? A 23.419 31.363 64.978 1 1 B ILE 0.740 1 ATOM 193 C CB . ILE 150 150 ? A 22.455 29.902 62.454 1 1 B ILE 0.740 1 ATOM 194 C CG1 . ILE 150 150 ? A 22.680 28.817 61.370 1 1 B ILE 0.740 1 ATOM 195 C CG2 . ILE 150 150 ? A 21.235 30.799 62.127 1 1 B ILE 0.740 1 ATOM 196 C CD1 . ILE 150 150 ? A 23.102 29.351 60.001 1 1 B ILE 0.740 1 ATOM 197 N N . ILE 151 151 ? A 23.478 33.016 63.456 1 1 B ILE 0.740 1 ATOM 198 C CA . ILE 151 151 ? A 23.222 34.086 64.384 1 1 B ILE 0.740 1 ATOM 199 C C . ILE 151 151 ? A 21.832 34.559 64.048 1 1 B ILE 0.740 1 ATOM 200 O O . ILE 151 151 ? A 21.510 34.869 62.902 1 1 B ILE 0.740 1 ATOM 201 C CB . ILE 151 151 ? A 24.243 35.216 64.297 1 1 B ILE 0.740 1 ATOM 202 C CG1 . ILE 151 151 ? A 25.656 34.686 64.626 1 1 B ILE 0.740 1 ATOM 203 C CG2 . ILE 151 151 ? A 23.860 36.378 65.244 1 1 B ILE 0.740 1 ATOM 204 C CD1 . ILE 151 151 ? A 26.755 35.623 64.124 1 1 B ILE 0.740 1 ATOM 205 N N . THR 152 152 ? A 20.977 34.555 65.076 1 1 B THR 0.720 1 ATOM 206 C CA . THR 152 152 ? A 19.636 35.095 65.083 1 1 B THR 0.720 1 ATOM 207 C C . THR 152 152 ? A 19.691 36.444 65.750 1 1 B THR 0.720 1 ATOM 208 O O . THR 152 152 ? A 20.154 36.542 66.890 1 1 B THR 0.720 1 ATOM 209 C CB . THR 152 152 ? A 18.669 34.303 65.957 1 1 B THR 0.720 1 ATOM 210 O OG1 . THR 152 152 ? A 18.727 32.909 65.705 1 1 B THR 0.720 1 ATOM 211 C CG2 . THR 152 152 ? A 17.229 34.761 65.702 1 1 B THR 0.720 1 ATOM 212 N N . ASP 153 153 ? A 19.198 37.506 65.102 1 1 B ASP 0.720 1 ATOM 213 C CA . ASP 153 153 ? A 19.060 38.799 65.719 1 1 B ASP 0.720 1 ATOM 214 C C . ASP 153 153 ? A 17.598 39.194 65.714 1 1 B ASP 0.720 1 ATOM 215 O O . ASP 153 153 ? A 16.738 38.527 65.136 1 1 B ASP 0.720 1 ATOM 216 C CB . ASP 153 153 ? A 20.056 39.872 65.173 1 1 B ASP 0.720 1 ATOM 217 C CG . ASP 153 153 ? A 19.903 40.298 63.719 1 1 B ASP 0.720 1 ATOM 218 O OD1 . ASP 153 153 ? A 19.036 39.753 63.000 1 1 B ASP 0.720 1 ATOM 219 O OD2 . ASP 153 153 ? A 20.685 41.208 63.334 1 1 B ASP 0.720 1 ATOM 220 N N . PHE 154 154 ? A 17.274 40.254 66.470 1 1 B PHE 0.760 1 ATOM 221 C CA . PHE 154 154 ? A 15.921 40.664 66.742 1 1 B PHE 0.760 1 ATOM 222 C C . PHE 154 154 ? A 15.942 42.166 66.760 1 1 B PHE 0.760 1 ATOM 223 O O . PHE 154 154 ? A 16.927 42.789 67.163 1 1 B PHE 0.760 1 ATOM 224 C CB . PHE 154 154 ? A 15.385 40.245 68.141 1 1 B PHE 0.760 1 ATOM 225 C CG . PHE 154 154 ? A 15.601 38.794 68.456 1 1 B PHE 0.760 1 ATOM 226 C CD1 . PHE 154 154 ? A 14.657 37.827 68.086 1 1 B PHE 0.760 1 ATOM 227 C CD2 . PHE 154 154 ? A 16.775 38.377 69.104 1 1 B PHE 0.760 1 ATOM 228 C CE1 . PHE 154 154 ? A 14.888 36.469 68.339 1 1 B PHE 0.760 1 ATOM 229 C CE2 . PHE 154 154 ? A 17.020 37.019 69.334 1 1 B PHE 0.760 1 ATOM 230 C CZ . PHE 154 154 ? A 16.075 36.063 68.955 1 1 B PHE 0.760 1 ATOM 231 N N . LYS 155 155 ? A 14.837 42.795 66.341 1 1 B LYS 0.650 1 ATOM 232 C CA . LYS 155 155 ? A 14.610 44.197 66.579 1 1 B LYS 0.650 1 ATOM 233 C C . LYS 155 155 ? A 14.191 44.419 68.025 1 1 B LYS 0.650 1 ATOM 234 O O . LYS 155 155 ? A 13.515 43.585 68.632 1 1 B LYS 0.650 1 ATOM 235 C CB . LYS 155 155 ? A 13.606 44.817 65.574 1 1 B LYS 0.650 1 ATOM 236 C CG . LYS 155 155 ? A 14.121 44.690 64.129 1 1 B LYS 0.650 1 ATOM 237 C CD . LYS 155 155 ? A 13.496 45.701 63.154 1 1 B LYS 0.650 1 ATOM 238 C CE . LYS 155 155 ? A 14.182 45.715 61.782 1 1 B LYS 0.650 1 ATOM 239 N NZ . LYS 155 155 ? A 13.580 46.763 60.925 1 1 B LYS 0.650 1 ATOM 240 N N . GLU 156 156 ? A 14.611 45.563 68.597 1 1 B GLU 0.580 1 ATOM 241 C CA . GLU 156 156 ? A 14.230 46.030 69.909 1 1 B GLU 0.580 1 ATOM 242 C C . GLU 156 156 ? A 12.832 46.600 69.806 1 1 B GLU 0.580 1 ATOM 243 O O . GLU 156 156 ? A 12.624 47.467 68.950 1 1 B GLU 0.580 1 ATOM 244 C CB . GLU 156 156 ? A 15.179 47.171 70.386 1 1 B GLU 0.580 1 ATOM 245 C CG . GLU 156 156 ? A 14.845 47.756 71.786 1 1 B GLU 0.580 1 ATOM 246 C CD . GLU 156 156 ? A 15.524 49.088 72.128 1 1 B GLU 0.580 1 ATOM 247 O OE1 . GLU 156 156 ? A 15.930 49.833 71.202 1 1 B GLU 0.580 1 ATOM 248 O OE2 . GLU 156 156 ? A 15.584 49.378 73.353 1 1 B GLU 0.580 1 ATOM 249 N N . LYS 157 157 ? A 11.887 46.125 70.639 1 1 B LYS 0.550 1 ATOM 250 C CA . LYS 157 157 ? A 10.602 46.713 70.996 1 1 B LYS 0.550 1 ATOM 251 C C . LYS 157 157 ? A 9.727 45.630 71.681 1 1 B LYS 0.550 1 ATOM 252 O O . LYS 157 157 ? A 10.149 44.442 71.682 1 1 B LYS 0.550 1 ATOM 253 C CB . LYS 157 157 ? A 9.778 47.528 69.936 1 1 B LYS 0.550 1 ATOM 254 C CG . LYS 157 157 ? A 8.942 48.660 70.568 1 1 B LYS 0.550 1 ATOM 255 C CD . LYS 157 157 ? A 9.847 49.772 71.122 1 1 B LYS 0.550 1 ATOM 256 C CE . LYS 157 157 ? A 9.211 50.632 72.202 1 1 B LYS 0.550 1 ATOM 257 N NZ . LYS 157 157 ? A 9.038 49.756 73.377 1 1 B LYS 0.550 1 ATOM 258 O OXT . LYS 157 157 ? A 8.678 46.011 72.271 1 1 B LYS 0.550 1 # # loop_ _atom_type.symbol C N O # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.677 2 1 3 0.109 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 126 ARG 1 0.510 2 1 A 127 PRO 1 0.650 3 1 A 128 ARG 1 0.490 4 1 A 129 LEU 1 0.590 5 1 A 130 LYS 1 0.560 6 1 A 131 ASN 1 0.680 7 1 A 132 VAL 1 0.710 8 1 A 133 ASP 1 0.740 9 1 A 134 ARG 1 0.660 10 1 A 135 SER 1 0.680 11 1 A 136 SER 1 0.760 12 1 A 137 ALA 1 0.750 13 1 A 138 GLN 1 0.640 14 1 A 139 HIS 1 0.670 15 1 A 140 LEU 1 0.710 16 1 A 141 GLU 1 0.690 17 1 A 142 VAL 1 0.710 18 1 A 143 THR 1 0.720 19 1 A 144 VAL 1 0.730 20 1 A 145 GLY 1 0.720 21 1 A 146 ASP 1 0.710 22 1 A 147 LEU 1 0.710 23 1 A 148 THR 1 0.700 24 1 A 149 VAL 1 0.700 25 1 A 150 ILE 1 0.740 26 1 A 151 ILE 1 0.740 27 1 A 152 THR 1 0.720 28 1 A 153 ASP 1 0.720 29 1 A 154 PHE 1 0.760 30 1 A 155 LYS 1 0.650 31 1 A 156 GLU 1 0.580 32 1 A 157 LYS 1 0.550 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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