data_SMR-f9ac0778e09082b5b9d05b97f519549b_2
_entry.id SMR-f9ac0778e09082b5b9d05b97f519549b_2
_struct.entry_id SMR-f9ac0778e09082b5b9d05b97f519549b_2
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - P34900/ SDC2_RAT, Syndecan-2

Estimated model accuracy of this model is 0.054, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries P34900'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 25774.019 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP SDC2_RAT P34900 1
;MQRAWILLTLGLMACVSAETRAELTSDKDMYLDSSSIEEASGLYPIDDDDYSSASGSGAYEDKGSPDLTT
SQLIPRISLTSAAPEVETMTLKTQSITPTQTESPEETDKKEFEISEAEEKQDPAVKSTDVYTEKHSDNLF
KRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA
;
Syndecan-2
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 201 1 201
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . SDC2_RAT P34900 . 1 201 10116 'Rattus norvegicus (Rat)' 1995-11-01
02E08455754C5E5A
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A
;MQRAWILLTLGLMACVSAETRAELTSDKDMYLDSSSIEEASGLYPIDDDDYSSASGSGAYEDKGSPDLTT
SQLIPRISLTSAAPEVETMTLKTQSITPTQTESPEETDKKEFEISEAEEKQDPAVKSTDVYTEKHSDNLF
KRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA
;

;MQRAWILLTLGLMACVSAETRAELTSDKDMYLDSSSIEEASGLYPIDDDDYSSASGSGAYEDKGSPDLTT
SQLIPRISLTSAAPEVETMTLKTQSITPTQTESPEETDKKEFEISEAEEKQDPAVKSTDVYTEKHSDNLF
KRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 GLN .
1 3 ARG .
1 4 ALA .
1 5 TRP .
1 6 ILE .
1 7 LEU .
1 8 LEU .
1 9 THR .
1 10 LEU .
1 11 GLY .
1 12 LEU .
1 13 MET .
1 14 ALA .
1 15 CYS .
1 16 VAL .
1 17 SER .
1 18 ALA .
1 19 GLU .
1 20 THR .
1 21 ARG .
1 22 ALA .
1 23 GLU .
1 24 LEU .
1 25 THR .
1 26 SER .
1 27 ASP .
1 28 LYS .
1 29 ASP .
1 30 MET .
1 31 TYR .
1 32 LEU .
1 33 ASP .
1 34 SER .
1 35 SER .
1 36 SER .
1 37 ILE .
1 38 GLU .
1 39 GLU .
1 40 ALA .
1 41 SER .
1 42 GLY .
1 43 LEU .
1 44 TYR .
1 45 PRO .
1 46 ILE .
1 47 ASP .
1 48 ASP .
1 49 ASP .
1 50 ASP .
1 51 TYR .
1 52 SER .
1 53 SER .
1 54 ALA .
1 55 SER .
1 56 GLY .
1 57 SER .
1 58 GLY .
1 59 ALA .
1 60 TYR .
1 61 GLU .
1 62 ASP .
1 63 LYS .
1 64 GLY .
1 65 SER .
1 66 PRO .
1 67 ASP .
1 68 LEU .
1 69 THR .
1 70 THR .
1 71 SER .
1 72 GLN .
1 73 LEU .
1 74 ILE .
1 75 PRO .
1 76 ARG .
1 77 ILE .
1 78 SER .
1 79 LEU .
1 80 THR .
1 81 SER .
1 82 ALA .
1 83 ALA .
1 84 PRO .
1 85 GLU .
1 86 VAL .
1 87 GLU .
1 88 THR .
1 89 MET .
1 90 THR .
1 91 LEU .
1 92 LYS .
1 93 THR .
1 94 GLN .
1 95 SER .
1 96 ILE .
1 97 THR .
1 98 PRO .
1 99 THR .
1 100 GLN .
1 101 THR .
1 102 GLU .
1 103 SER .
1 104 PRO .
1 105 GLU .
1 106 GLU .
1 107 THR .
1 108 ASP .
1 109 LYS .
1 110 LYS .
1 111 GLU .
1 112 PHE .
1 113 GLU .
1 114 ILE .
1 115 SER .
1 116 GLU .
1 117 ALA .
1 118 GLU .
1 119 GLU .
1 120 LYS .
1 121 GLN .
1 122 ASP .
1 123 PRO .
1 124 ALA .
1 125 VAL .
1 126 LYS .
1 127 SER .
1 128 THR .
1 129 ASP .
1 130 VAL .
1 131 TYR .
1 132 THR .
1 133 GLU .
1 134 LYS .
1 135 HIS .
1 136 SER .
1 137 ASP .
1 138 ASN .
1 139 LEU .
1 140 PHE .
1 141 LYS .
1 142 ARG .
1 143 THR .
1 144 GLU .
1 145 VAL .
1 146 LEU .
1 147 ALA .
1 148 ALA .
1 149 VAL .
1 150 ILE .
1 151 ALA .
1 152 GLY .
1 153 GLY .
1 154 VAL .
1 155 ILE .
1 156 GLY .
1 157 PHE .
1 158 LEU .
1 159 PHE .
1 160 ALA .
1 161 ILE .
1 162 PHE .
1 163 LEU .
1 164 ILE .
1 165 LEU .
1 166 LEU .
1 167 LEU .
1 168 VAL .
1 169 TYR .
1 170 ARG .
1 171 MET .
1 172 ARG .
1 173 LYS .
1 174 LYS .
1 175 ASP .
1 176 GLU .
1 177 GLY .
1 178 SER .
1 179 TYR .
1 180 ASP .
1 181 LEU .
1 182 GLY .
1 183 GLU .
1 184 ARG .
1 185 LYS .
1 186 PRO .
1 187 SER .
1 188 SER .
1 189 ALA .
1 190 ALA .
1 191 TYR .
1 192 GLN .
1 193 LYS .
1 194 ALA .
1 195 PRO .
1 196 THR .
1 197 LYS .
1 198 GLU .
1 199 PHE .
1 200 TYR .
1 201 ALA .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? A .
A 1 2 GLN 2 ? ? ? A .
A 1 3 ARG 3 ? ? ? A .
A 1 4 ALA 4 ? ? ? A .
A 1 5 TRP 5 ? ? ? A .
A 1 6 ILE 6 ? ? ? A .
A 1 7 LEU 7 ? ? ? A .
A 1 8 LEU 8 ? ? ? A .
A 1 9 THR 9 ? ? ? A .
A 1 10 LEU 10 ? ? ? A .
A 1 11 GLY 11 ? ? ? A .
A 1 12 LEU 12 ? ? ? A .
A 1 13 MET 13 ? ? ? A .
A 1 14 ALA 14 ? ? ? A .
A 1 15 CYS 15 ? ? ? A .
A 1 16 VAL 16 ? ? ? A .
A 1 17 SER 17 ? ? ? A .
A 1 18 ALA 18 ? ? ? A .
A 1 19 GLU 19 ? ? ? A .
A 1 20 THR 20 ? ? ? A .
A 1 21 ARG 21 ? ? ? A .
A 1 22 ALA 22 ? ? ? A .
A 1 23 GLU 23 ? ? ? A .
A 1 24 LEU 24 ? ? ? A .
A 1 25 THR 25 ? ? ? A .
A 1 26 SER 26 ? ? ? A .
A 1 27 ASP 27 ? ? ? A .
A 1 28 LYS 28 ? ? ? A .
A 1 29 ASP 29 ? ? ? A .
A 1 30 MET 30 ? ? ? A .
A 1 31 TYR 31 ? ? ? A .
A 1 32 LEU 32 ? ? ? A .
A 1 33 ASP 33 ? ? ? A .
A 1 34 SER 34 ? ? ? A .
A 1 35 SER 35 ? ? ? A .
A 1 36 SER 36 ? ? ? A .
A 1 37 ILE 37 ? ? ? A .
A 1 38 GLU 38 ? ? ? A .
A 1 39 GLU 39 ? ? ? A .
A 1 40 ALA 40 ? ? ? A .
A 1 41 SER 41 ? ? ? A .
A 1 42 GLY 42 ? ? ? A .
A 1 43 LEU 43 ? ? ? A .
A 1 44 TYR 44 ? ? ? A .
A 1 45 PRO 45 ? ? ? A .
A 1 46 ILE 46 ? ? ? A .
A 1 47 ASP 47 ? ? ? A .
A 1 48 ASP 48 ? ? ? A .
A 1 49 ASP 49 ? ? ? A .
A 1 50 ASP 50 ? ? ? A .
A 1 51 TYR 51 ? ? ? A .
A 1 52 SER 52 ? ? ? A .
A 1 53 SER 53 ? ? ? A .
A 1 54 ALA 54 ? ? ? A .
A 1 55 SER 55 ? ? ? A .
A 1 56 GLY 56 ? ? ? A .
A 1 57 SER 57 ? ? ? A .
A 1 58 GLY 58 ? ? ? A .
A 1 59 ALA 59 ? ? ? A .
A 1 60 TYR 60 ? ? ? A .
A 1 61 GLU 61 ? ? ? A .
A 1 62 ASP 62 ? ? ? A .
A 1 63 LYS 63 ? ? ? A .
A 1 64 GLY 64 ? ? ? A .
A 1 65 SER 65 ? ? ? A .
A 1 66 PRO 66 ? ? ? A .
A 1 67 ASP 67 ? ? ? A .
A 1 68 LEU 68 ? ? ? A .
A 1 69 THR 69 ? ? ? A .
A 1 70 THR 70 ? ? ? A .
A 1 71 SER 71 ? ? ? A .
A 1 72 GLN 72 ? ? ? A .
A 1 73 LEU 73 ? ? ? A .
A 1 74 ILE 74 ? ? ? A .
A 1 75 PRO 75 ? ? ? A .
A 1 76 ARG 76 ? ? ? A .
A 1 77 ILE 77 ? ? ? A .
A 1 78 SER 78 ? ? ? A .
A 1 79 LEU 79 ? ? ? A .
A 1 80 THR 80 ? ? ? A .
A 1 81 SER 81 ? ? ? A .
A 1 82 ALA 82 ? ? ? A .
A 1 83 ALA 83 ? ? ? A .
A 1 84 PRO 84 ? ? ? A .
A 1 85 GLU 85 ? ? ? A .
A 1 86 VAL 86 ? ? ? A .
A 1 87 GLU 87 ? ? ? A .
A 1 88 THR 88 ? ? ? A .
A 1 89 MET 89 ? ? ? A .
A 1 90 THR 90 ? ? ? A .
A 1 91 LEU 91 ? ? ? A .
A 1 92 LYS 92 ? ? ? A .
A 1 93 THR 93 ? ? ? A .
A 1 94 GLN 94 ? ? ? A .
A 1 95 SER 95 ? ? ? A .
A 1 96 ILE 96 ? ? ? A .
A 1 97 THR 97 ? ? ? A .
A 1 98 PRO 98 ? ? ? A .
A 1 99 THR 99 ? ? ? A .
A 1 100 GLN 100 ? ? ? A .
A 1 101 THR 101 ? ? ? A .
A 1 102 GLU 102 ? ? ? A .
A 1 103 SER 103 ? ? ? A .
A 1 104 PRO 104 ? ? ? A .
A 1 105 GLU 105 ? ? ? A .
A 1 106 GLU 106 ? ? ? A .
A 1 107 THR 107 ? ? ? A .
A 1 108 ASP 108 ? ? ? A .
A 1 109 LYS 109 ? ? ? A .
A 1 110 LYS 110 ? ? ? A .
A 1 111 GLU 111 ? ? ? A .
A 1 112 PHE 112 ? ? ? A .
A 1 113 GLU 113 ? ? ? A .
A 1 114 ILE 114 ? ? ? A .
A 1 115 SER 115 ? ? ? A .
A 1 116 GLU 116 ? ? ? A .
A 1 117 ALA 117 ? ? ? A .
A 1 118 GLU 118 ? ? ? A .
A 1 119 GLU 119 ? ? ? A .
A 1 120 LYS 120 ? ? ? A .
A 1 121 GLN 121 ? ? ? A .
A 1 122 ASP 122 ? ? ? A .
A 1 123 PRO 123 ? ? ? A .
A 1 124 ALA 124 ? ? ? A .
A 1 125 VAL 125 ? ? ? A .
A 1 126 LYS 126 ? ? ? A .
A 1 127 SER 127 ? ? ? A .
A 1 128 THR 128 ? ? ? A .
A 1 129 ASP 129 ? ? ? A .
A 1 130 VAL 130 ? ? ? A .
A 1 131 TYR 131 ? ? ? A .
A 1 132 THR 132 ? ? ? A .
A 1 133 GLU 133 ? ? ? A .
A 1 134 LYS 134 ? ? ? A .
A 1 135 HIS 135 ? ? ? A .
A 1 136 SER 136 ? ? ? A .
A 1 137 ASP 137 ? ? ? A .
A 1 138 ASN 138 ? ? ? A .
A 1 139 LEU 139 139 LEU LEU A .
A 1 140 PHE 140 140 PHE PHE A .
A 1 141 LYS 141 141 LYS LYS A .
A 1 142 ARG 142 142 ARG ARG A .
A 1 143 THR 143 143 THR THR A .
A 1 144 GLU 144 144 GLU GLU A .
A 1 145 VAL 145 145 VAL VAL A .
A 1 146 LEU 146 146 LEU LEU A .
A 1 147 ALA 147 147 ALA ALA A .
A 1 148 ALA 148 148 ALA ALA A .
A 1 149 VAL 149 149 VAL VAL A .
A 1 150 ILE 150 150 ILE ILE A .
A 1 151 ALA 151 151 ALA ALA A .
A 1 152 GLY 152 152 GLY GLY A .
A 1 153 GLY 153 153 GLY GLY A .
A 1 154 VAL 154 154 VAL VAL A .
A 1 155 ILE 155 155 ILE ILE A .
A 1 156 GLY 156 156 GLY GLY A .
A 1 157 PHE 157 157 PHE PHE A .
A 1 158 LEU 158 158 LEU LEU A .
A 1 159 PHE 159 159 PHE PHE A .
A 1 160 ALA 160 160 ALA ALA A .
A 1 161 ILE 161 161 ILE ILE A .
A 1 162 PHE 162 162 PHE PHE A .
A 1 163 LEU 163 163 LEU LEU A .
A 1 164 ILE 164 164 ILE ILE A .
A 1 165 LEU 165 165 LEU LEU A .
A 1 166 LEU 166 166 LEU LEU A .
A 1 167 LEU 167 167 LEU LEU A .
A 1 168 VAL 168 168 VAL VAL A .
A 1 169 TYR 169 169 TYR TYR A .
A 1 170 ARG 170 170 ARG ARG A .
A 1 171 MET 171 171 MET MET A .
A 1 172 ARG 172 172 ARG ARG A .
A 1 173 LYS 173 173 LYS LYS A .
A 1 174 LYS 174 174 LYS LYS A .
A 1 175 ASP 175 ? ? ? A .
A 1 176 GLU 176 ? ? ? A .
A 1 177 GLY 177 ? ? ? A .
A 1 178 SER 178 ? ? ? A .
A 1 179 TYR 179 ? ? ? A .
A 1 180 ASP 180 ? ? ? A .
A 1 181 LEU 181 ? ? ? A .
A 1 182 GLY 182 ? ? ? A .
A 1 183 GLU 183 ? ? ? A .
A 1 184 ARG 184 ? ? ? A .
A 1 185 LYS 185 ? ? ? A .
A 1 186 PRO 186 ? ? ? A .
A 1 187 SER 187 ? ? ? A .
A 1 188 SER 188 ? ? ? A .
A 1 189 ALA 189 ? ? ? A .
A 1 190 ALA 190 ? ? ? A .
A 1 191 TYR 191 ? ? ? A .
A 1 192 GLN 192 ? ? ? A .
A 1 193 LYS 193 ? ? ? A .
A 1 194 ALA 194 ? ? ? A .
A 1 195 PRO 195 ? ? ? A .
A 1 196 THR 196 ? ? ? A .
A 1 197 LYS 197 ? ? ? A .
A 1 198 GLU 198 ? ? ? A .
A 1 199 PHE 199 ? ? ? A .
A 1 200 TYR 200 ? ? ? A .
A 1 201 ALA 201 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'CD81 antigen {PDB ID=5tcx, label_asym_id=A, auth_asym_id=A, SMTL ID=5tcx.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 5tcx, label_asym_id=A'
'target-template alignment' .
4 'model 2' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-14
6 PDB https://www.wwpdb.org . 2024-11-08
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;RGVEGSTKSIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYVGIYILIAVGA
VMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDA
NNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAI
VVAVIMIFEMILSMVLSSGIRNSSVYVPHHHHHHHH
;

;RGVEGSTKSIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYVGIYILIAVGA
VMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDA
NNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAI
VVAVIMIFEMILSMVLSSGIRNSSVYVPHHHHHHHH
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 197 233
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 5tcx 2023-10-04
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 201
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 201 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 27.000 13.514
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MQRAWILLTLGLMACVSAETRAELTSDKDMYLDSSSIEEASGLYPIDDDDYSSASGSGAYEDKGSPDLTTSQLIPRISLTSAAPEVETMTLKTQSITPTQTESPEETDKKEFEISEAEEKQDPAVKSTDVYTEKHSDNLFKRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA
2 1 2
------------------------------------------------------------------------------------------------------------------------------------------LFSGKLYLIGIAAIVVAVIMIFEMILSMVLSSGIRNS--------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 5tcx.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 2' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . LEU 139 139 ? A 14.315 39.101 1.653 1 1 A LEU 0.640 1
ATOM 2 C CA . LEU 139 139 ? A 14.616 39.001 3.119 1 1 A LEU 0.640 1
ATOM 3 C C . LEU 139 139 ? A 15.041 40.306 3.794 1 1 A LEU 0.640 1
ATOM 4 O O . LEU 139 139 ? A 14.428 40.721 4.754 1 1 A LEU 0.640 1
ATOM 5 C CB . LEU 139 139 ? A 15.280 37.688 3.593 1 1 A LEU 0.640 1
ATOM 6 C CG . LEU 139 139 ? A 15.148 37.417 5.129 1 1 A LEU 0.640 1
ATOM 7 C CD1 . LEU 139 139 ? A 16.274 38.107 5.919 1 1 A LEU 0.640 1
ATOM 8 C CD2 . LEU 139 139 ? A 13.777 37.698 5.802 1 1 A LEU 0.640 1
ATOM 9 N N . PHE 140 140 ? A 16.028 41.032 3.241 1 1 A PHE 0.570 1
ATOM 10 C CA . PHE 140 140 ? A 16.529 42.255 3.844 1 1 A PHE 0.570 1
ATOM 11 C C . PHE 140 140 ? A 15.912 43.552 3.351 1 1 A PHE 0.570 1
ATOM 12 O O . PHE 140 140 ? A 16.096 44.584 3.961 1 1 A PHE 0.570 1
ATOM 13 C CB . PHE 140 140 ? A 18.015 42.315 3.454 1 1 A PHE 0.570 1
ATOM 14 C CG . PHE 140 140 ? A 18.799 41.419 4.352 1 1 A PHE 0.570 1
ATOM 15 C CD1 . PHE 140 140 ? A 19.145 41.906 5.616 1 1 A PHE 0.570 1
ATOM 16 C CD2 . PHE 140 140 ? A 19.218 40.134 3.973 1 1 A PHE 0.570 1
ATOM 17 C CE1 . PHE 140 140 ? A 19.936 41.147 6.479 1 1 A PHE 0.570 1
ATOM 18 C CE2 . PHE 140 140 ? A 20.005 39.366 4.842 1 1 A PHE 0.570 1
ATOM 19 C CZ . PHE 140 140 ? A 20.372 39.878 6.091 1 1 A PHE 0.570 1
ATOM 20 N N . LYS 141 141 ? A 15.167 43.523 2.228 1 1 A LYS 0.550 1
ATOM 21 C CA . LYS 141 141 ? A 14.519 44.707 1.695 1 1 A LYS 0.550 1
ATOM 22 C C . LYS 141 141 ? A 13.084 44.827 2.205 1 1 A LYS 0.550 1
ATOM 23 O O . LYS 141 141 ? A 12.789 45.508 3.163 1 1 A LYS 0.550 1
ATOM 24 C CB . LYS 141 141 ? A 14.596 44.709 0.145 1 1 A LYS 0.550 1
ATOM 25 C CG . LYS 141 141 ? A 14.012 45.976 -0.504 1 1 A LYS 0.550 1
ATOM 26 C CD . LYS 141 141 ? A 14.153 45.989 -2.036 1 1 A LYS 0.550 1
ATOM 27 C CE . LYS 141 141 ? A 13.558 47.250 -2.675 1 1 A LYS 0.550 1
ATOM 28 N NZ . LYS 141 141 ? A 13.755 47.230 -4.144 1 1 A LYS 0.550 1
ATOM 29 N N . ARG 142 142 ? A 12.116 44.153 1.550 1 1 A ARG 0.510 1
ATOM 30 C CA . ARG 142 142 ? A 10.706 44.261 1.902 1 1 A ARG 0.510 1
ATOM 31 C C . ARG 142 142 ? A 10.319 43.723 3.272 1 1 A ARG 0.510 1
ATOM 32 O O . ARG 142 142 ? A 9.427 44.222 3.947 1 1 A ARG 0.510 1
ATOM 33 C CB . ARG 142 142 ? A 9.872 43.529 0.833 1 1 A ARG 0.510 1
ATOM 34 C CG . ARG 142 142 ? A 9.887 44.239 -0.531 1 1 A ARG 0.510 1
ATOM 35 C CD . ARG 142 142 ? A 9.065 43.464 -1.557 1 1 A ARG 0.510 1
ATOM 36 N NE . ARG 142 142 ? A 9.112 44.221 -2.848 1 1 A ARG 0.510 1
ATOM 37 C CZ . ARG 142 142 ? A 8.592 43.737 -3.988 1 1 A ARG 0.510 1
ATOM 38 N NH1 . ARG 142 142 ? A 8.029 42.535 -4.031 1 1 A ARG 0.510 1
ATOM 39 N NH2 . ARG 142 142 ? A 8.602 44.474 -5.097 1 1 A ARG 0.510 1
ATOM 40 N N . THR 143 143 ? A 10.985 42.639 3.686 1 1 A THR 0.760 1
ATOM 41 C CA . THR 143 143 ? A 10.675 41.867 4.858 1 1 A THR 0.760 1
ATOM 42 C C . THR 143 143 ? A 11.647 42.204 5.988 1 1 A THR 0.760 1
ATOM 43 O O . THR 143 143 ? A 11.769 41.446 6.947 1 1 A THR 0.760 1
ATOM 44 C CB . THR 143 143 ? A 10.721 40.370 4.546 1 1 A THR 0.760 1
ATOM 45 O OG1 . THR 143 143 ? A 11.821 40.061 3.724 1 1 A THR 0.760 1
ATOM 46 C CG2 . THR 143 143 ? A 9.508 39.822 3.762 1 1 A THR 0.760 1
ATOM 47 N N . GLU 144 144 ? A 12.303 43.399 5.960 1 1 A GLU 0.730 1
ATOM 48 C CA . GLU 144 144 ? A 13.126 43.939 7.041 1 1 A GLU 0.730 1
ATOM 49 C C . GLU 144 144 ? A 12.313 44.170 8.303 1 1 A GLU 0.730 1
ATOM 50 O O . GLU 144 144 ? A 12.809 44.111 9.423 1 1 A GLU 0.730 1
ATOM 51 C CB . GLU 144 144 ? A 13.811 45.268 6.628 1 1 A GLU 0.730 1
ATOM 52 C CG . GLU 144 144 ? A 12.860 46.464 6.356 1 1 A GLU 0.730 1
ATOM 53 C CD . GLU 144 144 ? A 13.594 47.736 5.914 1 1 A GLU 0.730 1
ATOM 54 O OE1 . GLU 144 144 ? A 14.849 47.735 5.868 1 1 A GLU 0.730 1
ATOM 55 O OE2 . GLU 144 144 ? A 12.874 48.736 5.654 1 1 A GLU 0.730 1
ATOM 56 N N . VAL 145 145 ? A 10.980 44.333 8.116 1 1 A VAL 0.740 1
ATOM 57 C CA . VAL 145 145 ? A 9.986 44.374 9.169 1 1 A VAL 0.740 1
ATOM 58 C C . VAL 145 145 ? A 10.047 43.121 10.045 1 1 A VAL 0.740 1
ATOM 59 O O . VAL 145 145 ? A 9.944 43.199 11.263 1 1 A VAL 0.740 1
ATOM 60 C CB . VAL 145 145 ? A 8.561 44.632 8.635 1 1 A VAL 0.740 1
ATOM 61 C CG1 . VAL 145 145 ? A 8.531 46.003 7.924 1 1 A VAL 0.740 1
ATOM 62 C CG2 . VAL 145 145 ? A 8.031 43.521 7.702 1 1 A VAL 0.740 1
ATOM 63 N N . LEU 146 146 ? A 10.292 41.927 9.461 1 1 A LEU 0.730 1
ATOM 64 C CA . LEU 146 146 ? A 10.397 40.677 10.191 1 1 A LEU 0.730 1
ATOM 65 C C . LEU 146 146 ? A 11.611 40.625 11.102 1 1 A LEU 0.730 1
ATOM 66 O O . LEU 146 146 ? A 11.526 40.234 12.263 1 1 A LEU 0.730 1
ATOM 67 C CB . LEU 146 146 ? A 10.431 39.466 9.230 1 1 A LEU 0.730 1
ATOM 68 C CG . LEU 146 146 ? A 9.229 39.366 8.268 1 1 A LEU 0.730 1
ATOM 69 C CD1 . LEU 146 146 ? A 9.358 38.094 7.417 1 1 A LEU 0.730 1
ATOM 70 C CD2 . LEU 146 146 ? A 7.878 39.385 9.001 1 1 A LEU 0.730 1
ATOM 71 N N . ALA 147 147 ? A 12.774 41.082 10.589 1 1 A ALA 0.780 1
ATOM 72 C CA . ALA 147 147 ? A 13.994 41.214 11.356 1 1 A ALA 0.780 1
ATOM 73 C C . ALA 147 147 ? A 13.862 42.236 12.487 1 1 A ALA 0.780 1
ATOM 74 O O . ALA 147 147 ? A 14.329 42.004 13.595 1 1 A ALA 0.780 1
ATOM 75 C CB . ALA 147 147 ? A 15.183 41.553 10.435 1 1 A ALA 0.780 1
ATOM 76 N N . ALA 148 148 ? A 13.163 43.370 12.232 1 1 A ALA 0.810 1
ATOM 77 C CA . ALA 148 148 ? A 12.812 44.367 13.229 1 1 A ALA 0.810 1
ATOM 78 C C . ALA 148 148 ? A 11.967 43.799 14.379 1 1 A ALA 0.810 1
ATOM 79 O O . ALA 148 148 ? A 12.248 44.056 15.546 1 1 A ALA 0.810 1
ATOM 80 C CB . ALA 148 148 ? A 12.077 45.553 12.554 1 1 A ALA 0.810 1
ATOM 81 N N . VAL 149 149 ? A 10.941 42.963 14.068 1 1 A VAL 0.820 1
ATOM 82 C CA . VAL 149 149 ? A 10.121 42.274 15.068 1 1 A VAL 0.820 1
ATOM 83 C C . VAL 149 149 ? A 10.925 41.309 15.921 1 1 A VAL 0.820 1
ATOM 84 O O . VAL 149 149 ? A 10.842 41.324 17.145 1 1 A VAL 0.820 1
ATOM 85 C CB . VAL 149 149 ? A 8.966 41.488 14.439 1 1 A VAL 0.820 1
ATOM 86 C CG1 . VAL 149 149 ? A 8.202 40.629 15.477 1 1 A VAL 0.820 1
ATOM 87 C CG2 . VAL 149 149 ? A 7.973 42.475 13.805 1 1 A VAL 0.820 1
ATOM 88 N N . ILE 150 150 ? A 11.763 40.456 15.283 1 1 A ILE 0.810 1
ATOM 89 C CA . ILE 150 150 ? A 12.627 39.514 15.988 1 1 A ILE 0.810 1
ATOM 90 C C . ILE 150 150 ? A 13.628 40.239 16.865 1 1 A ILE 0.810 1
ATOM 91 O O . ILE 150 150 ? A 13.775 39.915 18.037 1 1 A ILE 0.810 1
ATOM 92 C CB . ILE 150 150 ? A 13.335 38.542 15.040 1 1 A ILE 0.810 1
ATOM 93 C CG1 . ILE 150 150 ? A 12.285 37.616 14.383 1 1 A ILE 0.810 1
ATOM 94 C CG2 . ILE 150 150 ? A 14.417 37.704 15.774 1 1 A ILE 0.810 1
ATOM 95 C CD1 . ILE 150 150 ? A 12.832 36.803 13.203 1 1 A ILE 0.810 1
ATOM 96 N N . ALA 151 151 ? A 14.282 41.302 16.340 1 1 A ALA 0.870 1
ATOM 97 C CA . ALA 151 151 ? A 15.213 42.100 17.107 1 1 A ALA 0.870 1
ATOM 98 C C . ALA 151 151 ? A 14.554 42.740 18.327 1 1 A ALA 0.870 1
ATOM 99 O O . ALA 151 151 ? A 15.033 42.605 19.447 1 1 A ALA 0.870 1
ATOM 100 C CB . ALA 151 151 ? A 15.840 43.184 16.202 1 1 A ALA 0.870 1
ATOM 101 N N . GLY 152 152 ? A 13.372 43.374 18.153 1 1 A GLY 0.880 1
ATOM 102 C CA . GLY 152 152 ? A 12.613 43.956 19.257 1 1 A GLY 0.880 1
ATOM 103 C C . GLY 152 152 ? A 12.068 42.968 20.262 1 1 A GLY 0.880 1
ATOM 104 O O . GLY 152 152 ? A 11.923 43.281 21.438 1 1 A GLY 0.880 1
ATOM 105 N N . GLY 153 153 ? A 11.795 41.723 19.829 1 1 A GLY 0.880 1
ATOM 106 C CA . GLY 153 153 ? A 11.447 40.626 20.723 1 1 A GLY 0.880 1
ATOM 107 C C . GLY 153 153 ? A 12.589 40.195 21.611 1 1 A GLY 0.880 1
ATOM 108 O O . GLY 153 153 ? A 12.413 39.995 22.806 1 1 A GLY 0.880 1
ATOM 109 N N . VAL 154 154 ? A 13.819 40.104 21.057 1 1 A VAL 0.890 1
ATOM 110 C CA . VAL 154 154 ? A 15.043 39.881 21.824 1 1 A VAL 0.890 1
ATOM 111 C C . VAL 154 154 ? A 15.308 41.032 22.793 1 1 A VAL 0.890 1
ATOM 112 O O . VAL 154 154 ? A 15.647 40.819 23.952 1 1 A VAL 0.890 1
ATOM 113 C CB . VAL 154 154 ? A 16.255 39.628 20.923 1 1 A VAL 0.890 1
ATOM 114 C CG1 . VAL 154 154 ? A 17.539 39.402 21.751 1 1 A VAL 0.890 1
ATOM 115 C CG2 . VAL 154 154 ? A 15.991 38.374 20.065 1 1 A VAL 0.890 1
ATOM 116 N N . ILE 155 155 ? A 15.097 42.296 22.345 1 1 A ILE 0.840 1
ATOM 117 C CA . ILE 155 155 ? A 15.234 43.493 23.172 1 1 A ILE 0.840 1
ATOM 118 C C . ILE 155 155 ? A 14.268 43.474 24.363 1 1 A ILE 0.840 1
ATOM 119 O O . ILE 155 155 ? A 14.662 43.645 25.507 1 1 A ILE 0.840 1
ATOM 120 C CB . ILE 155 155 ? A 15.065 44.772 22.331 1 1 A ILE 0.840 1
ATOM 121 C CG1 . ILE 155 155 ? A 16.224 44.895 21.310 1 1 A ILE 0.840 1
ATOM 122 C CG2 . ILE 155 155 ? A 15.040 46.037 23.213 1 1 A ILE 0.840 1
ATOM 123 C CD1 . ILE 155 155 ? A 16.027 45.959 20.218 1 1 A ILE 0.840 1
ATOM 124 N N . GLY 156 156 ? A 12.967 43.175 24.126 1 1 A GLY 0.910 1
ATOM 125 C CA . GLY 156 156 ? A 11.957 43.158 25.182 1 1 A GLY 0.910 1
ATOM 126 C C . GLY 156 156 ? A 12.122 42.061 26.193 1 1 A GLY 0.910 1
ATOM 127 O O . GLY 156 156 ? A 11.900 42.267 27.383 1 1 A GLY 0.910 1
ATOM 128 N N . PHE 157 157 ? A 12.578 40.873 25.760 1 1 A PHE 0.850 1
ATOM 129 C CA . PHE 157 157 ? A 12.945 39.807 26.668 1 1 A PHE 0.850 1
ATOM 130 C C . PHE 157 157 ? A 14.189 40.132 27.474 1 1 A PHE 0.850 1
ATOM 131 O O . PHE 157 157 ? A 14.285 39.760 28.634 1 1 A PHE 0.850 1
ATOM 132 C CB . PHE 157 157 ? A 13.070 38.431 25.969 1 1 A PHE 0.850 1
ATOM 133 C CG . PHE 157 157 ? A 11.729 37.926 25.493 1 1 A PHE 0.850 1
ATOM 134 C CD1 . PHE 157 157 ? A 10.612 37.881 26.346 1 1 A PHE 0.850 1
ATOM 135 C CD2 . PHE 157 157 ? A 11.583 37.442 24.184 1 1 A PHE 0.850 1
ATOM 136 C CE1 . PHE 157 157 ? A 9.377 37.408 25.890 1 1 A PHE 0.850 1
ATOM 137 C CE2 . PHE 157 157 ? A 10.350 36.968 23.723 1 1 A PHE 0.850 1
ATOM 138 C CZ . PHE 157 157 ? A 9.244 36.953 24.576 1 1 A PHE 0.850 1
ATOM 139 N N . LEU 158 158 ? A 15.159 40.883 26.910 1 1 A LEU 0.870 1
ATOM 140 C CA . LEU 158 158 ? A 16.317 41.306 27.671 1 1 A LEU 0.870 1
ATOM 141 C C . LEU 158 158 ? A 15.985 42.275 28.799 1 1 A LEU 0.870 1
ATOM 142 O O . LEU 158 158 ? A 16.390 42.076 29.938 1 1 A LEU 0.870 1
ATOM 143 C CB . LEU 158 158 ? A 17.368 41.958 26.753 1 1 A LEU 0.870 1
ATOM 144 C CG . LEU 158 158 ? A 18.663 42.399 27.463 1 1 A LEU 0.870 1
ATOM 145 C CD1 . LEU 158 158 ? A 19.397 41.225 28.132 1 1 A LEU 0.870 1
ATOM 146 C CD2 . LEU 158 158 ? A 19.572 43.128 26.466 1 1 A LEU 0.870 1
ATOM 147 N N . PHE 159 159 ? A 15.189 43.333 28.522 1 1 A PHE 0.850 1
ATOM 148 C CA . PHE 159 159 ? A 14.729 44.266 29.542 1 1 A PHE 0.850 1
ATOM 149 C C . PHE 159 159 ? A 13.815 43.616 30.576 1 1 A PHE 0.850 1
ATOM 150 O O . PHE 159 159 ? A 13.909 43.910 31.765 1 1 A PHE 0.850 1
ATOM 151 C CB . PHE 159 159 ? A 14.051 45.524 28.945 1 1 A PHE 0.850 1
ATOM 152 C CG . PHE 159 159 ? A 15.069 46.437 28.317 1 1 A PHE 0.850 1
ATOM 153 C CD1 . PHE 159 159 ? A 15.942 47.196 29.116 1 1 A PHE 0.850 1
ATOM 154 C CD2 . PHE 159 159 ? A 15.145 46.580 26.925 1 1 A PHE 0.850 1
ATOM 155 C CE1 . PHE 159 159 ? A 16.878 48.061 28.536 1 1 A PHE 0.850 1
ATOM 156 C CE2 . PHE 159 159 ? A 16.087 47.437 26.342 1 1 A PHE 0.850 1
ATOM 157 C CZ . PHE 159 159 ? A 16.957 48.173 27.147 1 1 A PHE 0.850 1
ATOM 158 N N . ALA 160 160 ? A 12.937 42.679 30.147 1 1 A ALA 0.900 1
ATOM 159 C CA . ALA 160 160 ? A 12.124 41.876 31.041 1 1 A ALA 0.900 1
ATOM 160 C C . ALA 160 160 ? A 12.972 41.011 31.984 1 1 A ALA 0.900 1
ATOM 161 O O . ALA 160 160 ? A 12.756 41.009 33.193 1 1 A ALA 0.900 1
ATOM 162 C CB . ALA 160 160 ? A 11.149 41.000 30.218 1 1 A ALA 0.900 1
ATOM 163 N N . ILE 161 161 ? A 14.016 40.322 31.450 1 1 A ILE 0.860 1
ATOM 164 C CA . ILE 161 161 ? A 15.009 39.587 32.235 1 1 A ILE 0.860 1
ATOM 165 C C . ILE 161 161 ? A 15.836 40.499 33.142 1 1 A ILE 0.860 1
ATOM 166 O O . ILE 161 161 ? A 16.111 40.177 34.291 1 1 A ILE 0.860 1
ATOM 167 C CB . ILE 161 161 ? A 15.878 38.625 31.423 1 1 A ILE 0.860 1
ATOM 168 C CG1 . ILE 161 161 ? A 14.980 37.522 30.814 1 1 A ILE 0.860 1
ATOM 169 C CG2 . ILE 161 161 ? A 16.962 37.966 32.315 1 1 A ILE 0.860 1
ATOM 170 C CD1 . ILE 161 161 ? A 15.694 36.694 29.740 1 1 A ILE 0.860 1
ATOM 171 N N . PHE 162 162 ? A 16.240 41.694 32.679 1 1 A PHE 0.840 1
ATOM 172 C CA . PHE 162 162 ? A 16.974 42.647 33.489 1 1 A PHE 0.840 1
ATOM 173 C C . PHE 162 162 ? A 16.205 43.155 34.709 1 1 A PHE 0.840 1
ATOM 174 O O . PHE 162 162 ? A 16.709 43.140 35.831 1 1 A PHE 0.840 1
ATOM 175 C CB . PHE 162 162 ? A 17.381 43.830 32.577 1 1 A PHE 0.840 1
ATOM 176 C CG . PHE 162 162 ? A 18.199 44.856 33.303 1 1 A PHE 0.840 1
ATOM 177 C CD1 . PHE 162 162 ? A 17.602 46.037 33.769 1 1 A PHE 0.840 1
ATOM 178 C CD2 . PHE 162 162 ? A 19.546 44.613 33.595 1 1 A PHE 0.840 1
ATOM 179 C CE1 . PHE 162 162 ? A 18.346 46.970 34.498 1 1 A PHE 0.840 1
ATOM 180 C CE2 . PHE 162 162 ? A 20.295 45.546 34.320 1 1 A PHE 0.840 1
ATOM 181 C CZ . PHE 162 162 ? A 19.698 46.730 34.764 1 1 A PHE 0.840 1
ATOM 182 N N . LEU 163 163 ? A 14.937 43.582 34.520 1 1 A LEU 0.850 1
ATOM 183 C CA . LEU 163 163 ? A 14.099 44.024 35.620 1 1 A LEU 0.850 1
ATOM 184 C C . LEU 163 163 ? A 13.800 42.909 36.597 1 1 A LEU 0.850 1
ATOM 185 O O . LEU 163 163 ? A 13.976 43.071 37.800 1 1 A LEU 0.850 1
ATOM 186 C CB . LEU 163 163 ? A 12.778 44.646 35.116 1 1 A LEU 0.850 1
ATOM 187 C CG . LEU 163 163 ? A 12.949 45.995 34.390 1 1 A LEU 0.850 1
ATOM 188 C CD1 . LEU 163 163 ? A 11.616 46.427 33.761 1 1 A LEU 0.850 1
ATOM 189 C CD2 . LEU 163 163 ? A 13.480 47.098 35.323 1 1 A LEU 0.850 1
ATOM 190 N N . ILE 164 164 ? A 13.432 41.707 36.101 1 1 A ILE 0.820 1
ATOM 191 C CA . ILE 164 164 ? A 13.199 40.553 36.953 1 1 A ILE 0.820 1
ATOM 192 C C . ILE 164 164 ? A 14.450 40.137 37.724 1 1 A ILE 0.820 1
ATOM 193 O O . ILE 164 164 ? A 14.363 39.719 38.863 1 1 A ILE 0.820 1
ATOM 194 C CB . ILE 164 164 ? A 12.520 39.389 36.230 1 1 A ILE 0.820 1
ATOM 195 C CG1 . ILE 164 164 ? A 11.791 38.407 37.171 1 1 A ILE 0.820 1
ATOM 196 C CG2 . ILE 164 164 ? A 13.521 38.658 35.330 1 1 A ILE 0.820 1
ATOM 197 C CD1 . ILE 164 164 ? A 10.886 37.440 36.392 1 1 A ILE 0.820 1
ATOM 198 N N . LEU 165 165 ? A 15.665 40.306 37.144 1 1 A LEU 0.810 1
ATOM 199 C CA . LEU 165 165 ? A 16.909 39.965 37.804 1 1 A LEU 0.810 1
ATOM 200 C C . LEU 165 165 ? A 17.204 40.830 39.020 1 1 A LEU 0.810 1
ATOM 201 O O . LEU 165 165 ? A 17.532 40.337 40.099 1 1 A LEU 0.810 1
ATOM 202 C CB . LEU 165 165 ? A 18.089 40.039 36.809 1 1 A LEU 0.810 1
ATOM 203 C CG . LEU 165 165 ? A 19.446 39.572 37.368 1 1 A LEU 0.810 1
ATOM 204 C CD1 . LEU 165 165 ? A 19.394 38.112 37.851 1 1 A LEU 0.810 1
ATOM 205 C CD2 . LEU 165 165 ? A 20.539 39.762 36.307 1 1 A LEU 0.810 1
ATOM 206 N N . LEU 166 166 ? A 17.037 42.162 38.893 1 1 A LEU 0.800 1
ATOM 207 C CA . LEU 166 166 ? A 17.165 43.078 40.012 1 1 A LEU 0.800 1
ATOM 208 C C . LEU 166 166 ? A 16.047 42.935 41.024 1 1 A LEU 0.800 1
ATOM 209 O O . LEU 166 166 ? A 16.260 43.084 42.225 1 1 A LEU 0.800 1
ATOM 210 C CB . LEU 166 166 ? A 17.287 44.543 39.557 1 1 A LEU 0.800 1
ATOM 211 C CG . LEU 166 166 ? A 18.586 44.850 38.787 1 1 A LEU 0.800 1
ATOM 212 C CD1 . LEU 166 166 ? A 18.536 46.290 38.259 1 1 A LEU 0.800 1
ATOM 213 C CD2 . LEU 166 166 ? A 19.851 44.637 39.640 1 1 A LEU 0.800 1
ATOM 214 N N . LEU 167 167 ? A 14.824 42.601 40.567 1 1 A LEU 0.790 1
ATOM 215 C CA . LEU 167 167 ? A 13.740 42.205 41.449 1 1 A LEU 0.790 1
ATOM 216 C C . LEU 167 167 ? A 14.054 40.943 42.230 1 1 A LEU 0.790 1
ATOM 217 O O . LEU 167 167 ? A 13.833 40.895 43.433 1 1 A LEU 0.790 1
ATOM 218 C CB . LEU 167 167 ? A 12.409 42.019 40.693 1 1 A LEU 0.790 1
ATOM 219 C CG . LEU 167 167 ? A 11.821 43.327 40.131 1 1 A LEU 0.790 1
ATOM 220 C CD1 . LEU 167 167 ? A 10.631 43.017 39.210 1 1 A LEU 0.790 1
ATOM 221 C CD2 . LEU 167 167 ? A 11.428 44.323 41.234 1 1 A LEU 0.790 1
ATOM 222 N N . VAL 168 168 ? A 14.643 39.916 41.585 1 1 A VAL 0.790 1
ATOM 223 C CA . VAL 168 168 ? A 15.150 38.725 42.244 1 1 A VAL 0.790 1
ATOM 224 C C . VAL 168 168 ? A 16.234 39.047 43.264 1 1 A VAL 0.790 1
ATOM 225 O O . VAL 168 168 ? A 16.180 38.567 44.387 1 1 A VAL 0.790 1
ATOM 226 C CB . VAL 168 168 ? A 15.628 37.683 41.231 1 1 A VAL 0.790 1
ATOM 227 C CG1 . VAL 168 168 ? A 16.505 36.592 41.866 1 1 A VAL 0.790 1
ATOM 228 C CG2 . VAL 168 168 ? A 14.399 36.996 40.609 1 1 A VAL 0.790 1
ATOM 229 N N . TYR 169 169 ? A 17.217 39.917 42.940 1 1 A TYR 0.690 1
ATOM 230 C CA . TYR 169 169 ? A 18.245 40.342 43.880 1 1 A TYR 0.690 1
ATOM 231 C C . TYR 169 169 ? A 17.681 41.054 45.115 1 1 A TYR 0.690 1
ATOM 232 O O . TYR 169 169 ? A 18.052 40.758 46.246 1 1 A TYR 0.690 1
ATOM 233 C CB . TYR 169 169 ? A 19.291 41.217 43.137 1 1 A TYR 0.690 1
ATOM 234 C CG . TYR 169 169 ? A 20.445 41.600 44.024 1 1 A TYR 0.690 1
ATOM 235 C CD1 . TYR 169 169 ? A 20.519 42.889 44.572 1 1 A TYR 0.690 1
ATOM 236 C CD2 . TYR 169 169 ? A 21.435 40.666 44.360 1 1 A TYR 0.690 1
ATOM 237 C CE1 . TYR 169 169 ? A 21.566 43.237 45.435 1 1 A TYR 0.690 1
ATOM 238 C CE2 . TYR 169 169 ? A 22.485 41.015 45.223 1 1 A TYR 0.690 1
ATOM 239 C CZ . TYR 169 169 ? A 22.550 42.305 45.760 1 1 A TYR 0.690 1
ATOM 240 O OH . TYR 169 169 ? A 23.594 42.678 46.628 1 1 A TYR 0.690 1
ATOM 241 N N . ARG 170 170 ? A 16.712 41.971 44.920 1 1 A ARG 0.610 1
ATOM 242 C CA . ARG 170 170 ? A 16.048 42.661 46.010 1 1 A ARG 0.610 1
ATOM 243 C C . ARG 170 170 ? A 15.086 41.777 46.808 1 1 A ARG 0.610 1
ATOM 244 O O . ARG 170 170 ? A 14.789 42.068 47.960 1 1 A ARG 0.610 1
ATOM 245 C CB . ARG 170 170 ? A 15.272 43.881 45.463 1 1 A ARG 0.610 1
ATOM 246 C CG . ARG 170 170 ? A 16.167 45.016 44.924 1 1 A ARG 0.610 1
ATOM 247 C CD . ARG 170 170 ? A 15.326 46.173 44.385 1 1 A ARG 0.610 1
ATOM 248 N NE . ARG 170 170 ? A 16.262 47.230 43.877 1 1 A ARG 0.610 1
ATOM 249 C CZ . ARG 170 170 ? A 15.848 48.346 43.259 1 1 A ARG 0.610 1
ATOM 250 N NH1 . ARG 170 170 ? A 14.554 48.581 43.066 1 1 A ARG 0.610 1
ATOM 251 N NH2 . ARG 170 170 ? A 16.732 49.244 42.828 1 1 A ARG 0.610 1
ATOM 252 N N . MET 171 171 ? A 14.599 40.669 46.210 1 1 A MET 0.690 1
ATOM 253 C CA . MET 171 171 ? A 13.711 39.713 46.845 1 1 A MET 0.690 1
ATOM 254 C C . MET 171 171 ? A 14.430 38.582 47.569 1 1 A MET 0.690 1
ATOM 255 O O . MET 171 171 ? A 13.940 38.037 48.552 1 1 A MET 0.690 1
ATOM 256 C CB . MET 171 171 ? A 12.806 39.077 45.767 1 1 A MET 0.690 1
ATOM 257 C CG . MET 171 171 ? A 11.684 38.178 46.319 1 1 A MET 0.690 1
ATOM 258 S SD . MET 171 171 ? A 10.604 37.452 45.051 1 1 A MET 0.690 1
ATOM 259 C CE . MET 171 171 ? A 9.844 39.010 44.515 1 1 A MET 0.690 1
ATOM 260 N N . ARG 172 172 ? A 15.632 38.193 47.097 1 1 A ARG 0.590 1
ATOM 261 C CA . ARG 172 172 ? A 16.442 37.153 47.710 1 1 A ARG 0.590 1
ATOM 262 C C . ARG 172 172 ? A 17.151 37.627 48.963 1 1 A ARG 0.590 1
ATOM 263 O O . ARG 172 172 ? A 17.659 36.814 49.728 1 1 A ARG 0.590 1
ATOM 264 C CB . ARG 172 172 ? A 17.520 36.621 46.734 1 1 A ARG 0.590 1
ATOM 265 C CG . ARG 172 172 ? A 16.999 35.660 45.649 1 1 A ARG 0.590 1
ATOM 266 C CD . ARG 172 172 ? A 18.144 35.183 44.754 1 1 A ARG 0.590 1
ATOM 267 N NE . ARG 172 172 ? A 17.582 34.220 43.748 1 1 A ARG 0.590 1
ATOM 268 C CZ . ARG 172 172 ? A 18.284 33.735 42.713 1 1 A ARG 0.590 1
ATOM 269 N NH1 . ARG 172 172 ? A 19.575 34.015 42.569 1 1 A ARG 0.590 1
ATOM 270 N NH2 . ARG 172 172 ? A 17.686 32.983 41.791 1 1 A ARG 0.590 1
ATOM 271 N N . LYS 173 173 ? A 17.207 38.950 49.193 1 1 A LYS 0.770 1
ATOM 272 C CA . LYS 173 173 ? A 17.733 39.521 50.412 1 1 A LYS 0.770 1
ATOM 273 C C . LYS 173 173 ? A 16.828 39.266 51.616 1 1 A LYS 0.770 1
ATOM 274 O O . LYS 173 173 ? A 15.813 39.940 51.792 1 1 A LYS 0.770 1
ATOM 275 C CB . LYS 173 173 ? A 17.920 41.043 50.230 1 1 A LYS 0.770 1
ATOM 276 C CG . LYS 173 173 ? A 18.641 41.692 51.418 1 1 A LYS 0.770 1
ATOM 277 C CD . LYS 173 173 ? A 18.873 43.192 51.212 1 1 A LYS 0.770 1
ATOM 278 C CE . LYS 173 173 ? A 19.596 43.832 52.397 1 1 A LYS 0.770 1
ATOM 279 N NZ . LYS 173 173 ? A 19.803 45.272 52.137 1 1 A LYS 0.770 1
ATOM 280 N N . LYS 174 174 ? A 17.184 38.289 52.467 1 1 A LYS 0.620 1
ATOM 281 C CA . LYS 174 174 ? A 16.415 37.864 53.612 1 1 A LYS 0.620 1
ATOM 282 C C . LYS 174 174 ? A 17.401 37.394 54.708 1 1 A LYS 0.620 1
ATOM 283 O O . LYS 174 174 ? A 18.636 37.413 54.447 1 1 A LYS 0.620 1
ATOM 284 C CB . LYS 174 174 ? A 15.487 36.673 53.254 1 1 A LYS 0.620 1
ATOM 285 C CG . LYS 174 174 ? A 14.383 37.053 52.260 1 1 A LYS 0.620 1
ATOM 286 C CD . LYS 174 174 ? A 13.416 35.909 51.945 1 1 A LYS 0.620 1
ATOM 287 C CE . LYS 174 174 ? A 12.330 36.350 50.967 1 1 A LYS 0.620 1
ATOM 288 N NZ . LYS 174 174 ? A 11.451 35.208 50.652 1 1 A LYS 0.620 1
ATOM 289 O OXT . LYS 174 174 ? A 16.921 37.003 55.807 1 1 A LYS 0.620 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.770
2 1 3 0.054
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 139 LEU 1 0.640
2 1 A 140 PHE 1 0.570
3 1 A 141 LYS 1 0.550
4 1 A 142 ARG 1 0.510
5 1 A 143 THR 1 0.760
6 1 A 144 GLU 1 0.730
7 1 A 145 VAL 1 0.740
8 1 A 146 LEU 1 0.730
9 1 A 147 ALA 1 0.780
10 1 A 148 ALA 1 0.810
11 1 A 149 VAL 1 0.820
12 1 A 150 ILE 1 0.810
13 1 A 151 ALA 1 0.870
14 1 A 152 GLY 1 0.880
15 1 A 153 GLY 1 0.880
16 1 A 154 VAL 1 0.890
17 1 A 155 ILE 1 0.840
18 1 A 156 GLY 1 0.910
19 1 A 157 PHE 1 0.850
20 1 A 158 LEU 1 0.870
21 1 A 159 PHE 1 0.850
22 1 A 160 ALA 1 0.900
23 1 A 161 ILE 1 0.860
24 1 A 162 PHE 1 0.840
25 1 A 163 LEU 1 0.850
26 1 A 164 ILE 1 0.820
27 1 A 165 LEU 1 0.810
28 1 A 166 LEU 1 0.800
29 1 A 167 LEU 1 0.790
30 1 A 168 VAL 1 0.790
31 1 A 169 TYR 1 0.690
32 1 A 170 ARG 1 0.610
33 1 A 171 MET 1 0.690
34 1 A 172 ARG 1 0.590
35 1 A 173 LYS 1 0.770
36 1 A 174 LYS 1 0.620
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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