data_SMR-3147b3a492086063c4097ade9a47e1dc_1
_entry.id SMR-3147b3a492086063c4097ade9a47e1dc_1
_struct.entry_id SMR-3147b3a492086063c4097ade9a47e1dc_1
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - Q5H8V1/ Q5H8V1_HUMAN, Tumor necrosis factor receptor superfamily, member 13C
  - Q96RJ3/ TR13C_HUMAN, Tumor necrosis factor receptor superfamily member 13C

Estimated model accuracy of this model is 0.083, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries Q5H8V1, Q96RJ3'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 22181.680 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP TR13C_HUMAN Q96RJ3 1
;MRRGPRSLRGRDAPAPTPCVPAECFDLLVRHCVACGLLRTPRPKPAGASSPAPRTALQPQESVGAGAGEA
ALPLPGLLFGAPALLGLALVLALVLVGLVSWRRRQRRLRGASSAEAPDGDKDAPEPLDKVIILSPGISDA
TAPAWPPPGEDPGTTPPGHSVPVPATELGSTELVTTKTAGPEQQ
;
'Tumor necrosis factor receptor superfamily member 13C'
2 1 UNP Q5H8V1_HUMAN Q5H8V1 1
;MRRGPRSLRGRDAPAPTPCVPAECFDLLVRHCVACGLLRTPRPKPAGASSPAPRTALQPQESVGAGAGEA
ALPLPGLLFGAPALLGLALVLALVLVGLVSWRRRQRRLRGASSAEAPDGDKDAPEPLDKVIILSPGISDA
TAPAWPPPGEDPGTTPPGHSVPVPATELGSTELVTTKTAGPEQQ
;
'Tumor necrosis factor receptor superfamily, member 13C'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 184 1 184
2 2 1 184 1 184
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . TR13C_HUMAN Q96RJ3 . 1 184 9606 'Homo sapiens (Human)' 2001-12-01
F2BFB98099A27138
1 UNP . Q5H8V1_HUMAN Q5H8V1 . 1 184 9606 'Homo sapiens (Human)' 2005-05-10
F2BFB98099A27138
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A
;MRRGPRSLRGRDAPAPTPCVPAECFDLLVRHCVACGLLRTPRPKPAGASSPAPRTALQPQESVGAGAGEA
ALPLPGLLFGAPALLGLALVLALVLVGLVSWRRRQRRLRGASSAEAPDGDKDAPEPLDKVIILSPGISDA
TAPAWPPPGEDPGTTPPGHSVPVPATELGSTELVTTKTAGPEQQ
;

;MRRGPRSLRGRDAPAPTPCVPAECFDLLVRHCVACGLLRTPRPKPAGASSPAPRTALQPQESVGAGAGEA
ALPLPGLLFGAPALLGLALVLALVLVGLVSWRRRQRRLRGASSAEAPDGDKDAPEPLDKVIILSPGISDA
TAPAWPPPGEDPGTTPPGHSVPVPATELGSTELVTTKTAGPEQQ
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 ARG .
1 3 ARG .
1 4 GLY .
1 5 PRO .
1 6 ARG .
1 7 SER .
1 8 LEU .
1 9 ARG .
1 10 GLY .
1 11 ARG .
1 12 ASP .
1 13 ALA .
1 14 PRO .
1 15 ALA .
1 16 PRO .
1 17 THR .
1 18 PRO .
1 19 CYS .
1 20 VAL .
1 21 PRO .
1 22 ALA .
1 23 GLU .
1 24 CYS .
1 25 PHE .
1 26 ASP .
1 27 LEU .
1 28 LEU .
1 29 VAL .
1 30 ARG .
1 31 HIS .
1 32 CYS .
1 33 VAL .
1 34 ALA .
1 35 CYS .
1 36 GLY .
1 37 LEU .
1 38 LEU .
1 39 ARG .
1 40 THR .
1 41 PRO .
1 42 ARG .
1 43 PRO .
1 44 LYS .
1 45 PRO .
1 46 ALA .
1 47 GLY .
1 48 ALA .
1 49 SER .
1 50 SER .
1 51 PRO .
1 52 ALA .
1 53 PRO .
1 54 ARG .
1 55 THR .
1 56 ALA .
1 57 LEU .
1 58 GLN .
1 59 PRO .
1 60 GLN .
1 61 GLU .
1 62 SER .
1 63 VAL .
1 64 GLY .
1 65 ALA .
1 66 GLY .
1 67 ALA .
1 68 GLY .
1 69 GLU .
1 70 ALA .
1 71 ALA .
1 72 LEU .
1 73 PRO .
1 74 LEU .
1 75 PRO .
1 76 GLY .
1 77 LEU .
1 78 LEU .
1 79 PHE .
1 80 GLY .
1 81 ALA .
1 82 PRO .
1 83 ALA .
1 84 LEU .
1 85 LEU .
1 86 GLY .
1 87 LEU .
1 88 ALA .
1 89 LEU .
1 90 VAL .
1 91 LEU .
1 92 ALA .
1 93 LEU .
1 94 VAL .
1 95 LEU .
1 96 VAL .
1 97 GLY .
1 98 LEU .
1 99 VAL .
1 100 SER .
1 101 TRP .
1 102 ARG .
1 103 ARG .
1 104 ARG .
1 105 GLN .
1 106 ARG .
1 107 ARG .
1 108 LEU .
1 109 ARG .
1 110 GLY .
1 111 ALA .
1 112 SER .
1 113 SER .
1 114 ALA .
1 115 GLU .
1 116 ALA .
1 117 PRO .
1 118 ASP .
1 119 GLY .
1 120 ASP .
1 121 LYS .
1 122 ASP .
1 123 ALA .
1 124 PRO .
1 125 GLU .
1 126 PRO .
1 127 LEU .
1 128 ASP .
1 129 LYS .
1 130 VAL .
1 131 ILE .
1 132 ILE .
1 133 LEU .
1 134 SER .
1 135 PRO .
1 136 GLY .
1 137 ILE .
1 138 SER .
1 139 ASP .
1 140 ALA .
1 141 THR .
1 142 ALA .
1 143 PRO .
1 144 ALA .
1 145 TRP .
1 146 PRO .
1 147 PRO .
1 148 PRO .
1 149 GLY .
1 150 GLU .
1 151 ASP .
1 152 PRO .
1 153 GLY .
1 154 THR .
1 155 THR .
1 156 PRO .
1 157 PRO .
1 158 GLY .
1 159 HIS .
1 160 SER .
1 161 VAL .
1 162 PRO .
1 163 VAL .
1 164 PRO .
1 165 ALA .
1 166 THR .
1 167 GLU .
1 168 LEU .
1 169 GLY .
1 170 SER .
1 171 THR .
1 172 GLU .
1 173 LEU .
1 174 VAL .
1 175 THR .
1 176 THR .
1 177 LYS .
1 178 THR .
1 179 ALA .
1 180 GLY .
1 181 PRO .
1 182 GLU .
1 183 GLN .
1 184 GLN .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? A .
A 1 2 ARG 2 ? ? ? A .
A 1 3 ARG 3 ? ? ? A .
A 1 4 GLY 4 ? ? ? A .
A 1 5 PRO 5 ? ? ? A .
A 1 6 ARG 6 ? ? ? A .
A 1 7 SER 7 ? ? ? A .
A 1 8 LEU 8 ? ? ? A .
A 1 9 ARG 9 ? ? ? A .
A 1 10 GLY 10 ? ? ? A .
A 1 11 ARG 11 ? ? ? A .
A 1 12 ASP 12 ? ? ? A .
A 1 13 ALA 13 ? ? ? A .
A 1 14 PRO 14 ? ? ? A .
A 1 15 ALA 15 ? ? ? A .
A 1 16 PRO 16 ? ? ? A .
A 1 17 THR 17 17 THR THR A .
A 1 18 PRO 18 18 PRO PRO A .
A 1 19 CYS 19 19 CYS CYS A .
A 1 20 VAL 20 20 VAL VAL A .
A 1 21 PRO 21 21 PRO PRO A .
A 1 22 ALA 22 22 ALA ALA A .
A 1 23 GLU 23 23 GLU GLU A .
A 1 24 CYS 24 24 CYS CYS A .
A 1 25 PHE 25 25 PHE PHE A .
A 1 26 ASP 26 26 ASP ASP A .
A 1 27 LEU 27 27 LEU LEU A .
A 1 28 LEU 28 28 LEU LEU A .
A 1 29 VAL 29 29 VAL VAL A .
A 1 30 ARG 30 30 ARG ARG A .
A 1 31 HIS 31 31 HIS HIS A .
A 1 32 CYS 32 32 CYS CYS A .
A 1 33 VAL 33 33 VAL VAL A .
A 1 34 ALA 34 34 ALA ALA A .
A 1 35 CYS 35 35 CYS CYS A .
A 1 36 GLY 36 36 GLY GLY A .
A 1 37 LEU 37 37 LEU LEU A .
A 1 38 LEU 38 38 LEU LEU A .
A 1 39 ARG 39 39 ARG ARG A .
A 1 40 THR 40 40 THR THR A .
A 1 41 PRO 41 ? ? ? A .
A 1 42 ARG 42 ? ? ? A .
A 1 43 PRO 43 ? ? ? A .
A 1 44 LYS 44 ? ? ? A .
A 1 45 PRO 45 ? ? ? A .
A 1 46 ALA 46 ? ? ? A .
A 1 47 GLY 47 ? ? ? A .
A 1 48 ALA 48 ? ? ? A .
A 1 49 SER 49 ? ? ? A .
A 1 50 SER 50 ? ? ? A .
A 1 51 PRO 51 ? ? ? A .
A 1 52 ALA 52 ? ? ? A .
A 1 53 PRO 53 ? ? ? A .
A 1 54 ARG 54 ? ? ? A .
A 1 55 THR 55 ? ? ? A .
A 1 56 ALA 56 ? ? ? A .
A 1 57 LEU 57 ? ? ? A .
A 1 58 GLN 58 ? ? ? A .
A 1 59 PRO 59 ? ? ? A .
A 1 60 GLN 60 ? ? ? A .
A 1 61 GLU 61 ? ? ? A .
A 1 62 SER 62 ? ? ? A .
A 1 63 VAL 63 ? ? ? A .
A 1 64 GLY 64 ? ? ? A .
A 1 65 ALA 65 ? ? ? A .
A 1 66 GLY 66 ? ? ? A .
A 1 67 ALA 67 ? ? ? A .
A 1 68 GLY 68 ? ? ? A .
A 1 69 GLU 69 ? ? ? A .
A 1 70 ALA 70 ? ? ? A .
A 1 71 ALA 71 ? ? ? A .
A 1 72 LEU 72 ? ? ? A .
A 1 73 PRO 73 ? ? ? A .
A 1 74 LEU 74 ? ? ? A .
A 1 75 PRO 75 ? ? ? A .
A 1 76 GLY 76 ? ? ? A .
A 1 77 LEU 77 ? ? ? A .
A 1 78 LEU 78 ? ? ? A .
A 1 79 PHE 79 ? ? ? A .
A 1 80 GLY 80 ? ? ? A .
A 1 81 ALA 81 ? ? ? A .
A 1 82 PRO 82 ? ? ? A .
A 1 83 ALA 83 ? ? ? A .
A 1 84 LEU 84 ? ? ? A .
A 1 85 LEU 85 ? ? ? A .
A 1 86 GLY 86 ? ? ? A .
A 1 87 LEU 87 ? ? ? A .
A 1 88 ALA 88 ? ? ? A .
A 1 89 LEU 89 ? ? ? A .
A 1 90 VAL 90 ? ? ? A .
A 1 91 LEU 91 ? ? ? A .
A 1 92 ALA 92 ? ? ? A .
A 1 93 LEU 93 ? ? ? A .
A 1 94 VAL 94 ? ? ? A .
A 1 95 LEU 95 ? ? ? A .
A 1 96 VAL 96 ? ? ? A .
A 1 97 GLY 97 ? ? ? A .
A 1 98 LEU 98 ? ? ? A .
A 1 99 VAL 99 ? ? ? A .
A 1 100 SER 100 ? ? ? A .
A 1 101 TRP 101 ? ? ? A .
A 1 102 ARG 102 ? ? ? A .
A 1 103 ARG 103 ? ? ? A .
A 1 104 ARG 104 ? ? ? A .
A 1 105 GLN 105 ? ? ? A .
A 1 106 ARG 106 ? ? ? A .
A 1 107 ARG 107 ? ? ? A .
A 1 108 LEU 108 ? ? ? A .
A 1 109 ARG 109 ? ? ? A .
A 1 110 GLY 110 ? ? ? A .
A 1 111 ALA 111 ? ? ? A .
A 1 112 SER 112 ? ? ? A .
A 1 113 SER 113 ? ? ? A .
A 1 114 ALA 114 ? ? ? A .
A 1 115 GLU 115 ? ? ? A .
A 1 116 ALA 116 ? ? ? A .
A 1 117 PRO 117 ? ? ? A .
A 1 118 ASP 118 ? ? ? A .
A 1 119 GLY 119 ? ? ? A .
A 1 120 ASP 120 ? ? ? A .
A 1 121 LYS 121 ? ? ? A .
A 1 122 ASP 122 ? ? ? A .
A 1 123 ALA 123 ? ? ? A .
A 1 124 PRO 124 ? ? ? A .
A 1 125 GLU 125 ? ? ? A .
A 1 126 PRO 126 ? ? ? A .
A 1 127 LEU 127 ? ? ? A .
A 1 128 ASP 128 ? ? ? A .
A 1 129 LYS 129 ? ? ? A .
A 1 130 VAL 130 ? ? ? A .
A 1 131 ILE 131 ? ? ? A .
A 1 132 ILE 132 ? ? ? A .
A 1 133 LEU 133 ? ? ? A .
A 1 134 SER 134 ? ? ? A .
A 1 135 PRO 135 ? ? ? A .
A 1 136 GLY 136 ? ? ? A .
A 1 137 ILE 137 ? ? ? A .
A 1 138 SER 138 ? ? ? A .
A 1 139 ASP 139 ? ? ? A .
A 1 140 ALA 140 ? ? ? A .
A 1 141 THR 141 ? ? ? A .
A 1 142 ALA 142 ? ? ? A .
A 1 143 PRO 143 ? ? ? A .
A 1 144 ALA 144 ? ? ? A .
A 1 145 TRP 145 ? ? ? A .
A 1 146 PRO 146 ? ? ? A .
A 1 147 PRO 147 ? ? ? A .
A 1 148 PRO 148 ? ? ? A .
A 1 149 GLY 149 ? ? ? A .
A 1 150 GLU 150 ? ? ? A .
A 1 151 ASP 151 ? ? ? A .
A 1 152 PRO 152 ? ? ? A .
A 1 153 GLY 153 ? ? ? A .
A 1 154 THR 154 ? ? ? A .
A 1 155 THR 155 ? ? ? A .
A 1 156 PRO 156 ? ? ? A .
A 1 157 PRO 157 ? ? ? A .
A 1 158 GLY 158 ? ? ? A .
A 1 159 HIS 159 ? ? ? A .
A 1 160 SER 160 ? ? ? A .
A 1 161 VAL 161 ? ? ? A .
A 1 162 PRO 162 ? ? ? A .
A 1 163 VAL 163 ? ? ? A .
A 1 164 PRO 164 ? ? ? A .
A 1 165 ALA 165 ? ? ? A .
A 1 166 THR 166 ? ? ? A .
A 1 167 GLU 167 ? ? ? A .
A 1 168 LEU 168 ? ? ? A .
A 1 169 GLY 169 ? ? ? A .
A 1 170 SER 170 ? ? ? A .
A 1 171 THR 171 ? ? ? A .
A 1 172 GLU 172 ? ? ? A .
A 1 173 LEU 173 ? ? ? A .
A 1 174 VAL 174 ? ? ? A .
A 1 175 THR 175 ? ? ? A .
A 1 176 THR 176 ? ? ? A .
A 1 177 LYS 177 ? ? ? A .
A 1 178 THR 178 ? ? ? A .
A 1 179 ALA 179 ? ? ? A .
A 1 180 GLY 180 ? ? ? A .
A 1 181 PRO 181 ? ? ? A .
A 1 182 GLU 182 ? ? ? A .
A 1 183 GLN 183 ? ? ? A .
A 1 184 GLN 184 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Tumor necrosis factor receptor superfamily member 13C {PDB ID=4v46, label_asym_id=IB, auth_asym_id=BA, SMTL ID=4v46.61.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 4v46, label_asym_id=IB'
'target-template alignment' .
4 'model 1' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-14
6 PDB https://www.wwpdb.org . 2024-11-08
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A IB 2 1 BA
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 MRRGPRSLRGRDAPAPTPCVPAECFDLLVRHCVACGLLRTPRPKPAGASSPAPRTALQPQESV
MRRGPRSLRGRDAPAPTPCVPAECFDLLVRHCVACGLLRTPRPKPAGASSPAPRTALQPQESV
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 1 63
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 4v46 2024-10-09
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 184
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 184 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 6.3e-25 100.000
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MRRGPRSLRGRDAPAPTPCVPAECFDLLVRHCVACGLLRTPRPKPAGASSPAPRTALQPQESVGAGAGEAALPLPGLLFGAPALLGLALVLALVLVGLVSWRRRQRRLRGASSAEAPDGDKDAPEPLDKVIILSPGISDATAPAWPPPGEDPGTTPPGHSVPVPATELGSTELVTTKTAGPEQQ
2 1 2
MRRGPRSLRGRDAPAPTPCVPAECFDLLVRHCVACGLLRTPRPKPAGASSPAPRTALQPQESV-------------------------------------------------------------------------------------------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 4v46.61' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 1' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . THR 17 17 ? A -2.514 38.757 -6.159 1 1 A THR 0.150 1
ATOM 2 C CA . THR 17 17 ? A -2.993 38.992 -7.565 1 1 A THR 0.150 1
ATOM 3 C C . THR 17 17 ? A -2.287 37.994 -8.470 1 1 A THR 0.150 1
ATOM 4 O O . THR 17 17 ? A -1.113 38.206 -8.748 1 1 A THR 0.150 1
ATOM 5 C CB . THR 17 17 ? A -2.703 40.453 -7.970 1 1 A THR 0.150 1
ATOM 6 O OG1 . THR 17 17 ? A -1.411 40.885 -7.550 1 1 A THR 0.150 1
ATOM 7 C CG2 . THR 17 17 ? A -3.702 41.383 -7.255 1 1 A THR 0.150 1
ATOM 8 N N . PRO 18 18 ? A -2.862 36.854 -8.879 1 1 A PRO 0.270 1
ATOM 9 C CA . PRO 18 18 ? A -2.235 35.957 -9.859 1 1 A PRO 0.270 1
ATOM 10 C C . PRO 18 18 ? A -2.036 36.630 -11.210 1 1 A PRO 0.270 1
ATOM 11 O O . PRO 18 18 ? A -2.712 37.615 -11.500 1 1 A PRO 0.270 1
ATOM 12 C CB . PRO 18 18 ? A -3.212 34.771 -9.946 1 1 A PRO 0.270 1
ATOM 13 C CG . PRO 18 18 ? A -4.563 35.399 -9.607 1 1 A PRO 0.270 1
ATOM 14 C CD . PRO 18 18 ? A -4.201 36.386 -8.503 1 1 A PRO 0.270 1
ATOM 15 N N . CYS 19 19 ? A -1.092 36.125 -12.028 1 1 A CYS 0.600 1
ATOM 16 C CA . CYS 19 19 ? A -0.714 36.726 -13.292 1 1 A CYS 0.600 1
ATOM 17 C C . CYS 19 19 ? A -1.676 36.299 -14.391 1 1 A CYS 0.600 1
ATOM 18 O O . CYS 19 19 ? A -2.586 35.498 -14.180 1 1 A CYS 0.600 1
ATOM 19 C CB . CYS 19 19 ? A 0.748 36.368 -13.684 1 1 A CYS 0.600 1
ATOM 20 S SG . CYS 19 19 ? A 1.936 36.729 -12.352 1 1 A CYS 0.600 1
ATOM 21 N N . VAL 20 20 ? A -1.506 36.848 -15.609 1 1 A VAL 0.600 1
ATOM 22 C CA . VAL 20 20 ? A -2.218 36.441 -16.812 1 1 A VAL 0.600 1
ATOM 23 C C . VAL 20 20 ? A -1.967 34.944 -17.103 1 1 A VAL 0.600 1
ATOM 24 O O . VAL 20 20 ? A -0.865 34.476 -16.826 1 1 A VAL 0.600 1
ATOM 25 C CB . VAL 20 20 ? A -1.741 37.316 -17.975 1 1 A VAL 0.600 1
ATOM 26 C CG1 . VAL 20 20 ? A -2.474 37.015 -19.294 1 1 A VAL 0.600 1
ATOM 27 C CG2 . VAL 20 20 ? A -1.934 38.808 -17.627 1 1 A VAL 0.600 1
ATOM 28 N N . PRO 21 21 ? A -2.875 34.093 -17.592 1 1 A PRO 0.570 1
ATOM 29 C CA . PRO 21 21 ? A -2.536 32.744 -18.057 1 1 A PRO 0.570 1
ATOM 30 C C . PRO 21 21 ? A -1.372 32.674 -19.045 1 1 A PRO 0.570 1
ATOM 31 O O . PRO 21 21 ? A -1.257 33.561 -19.884 1 1 A PRO 0.570 1
ATOM 32 C CB . PRO 21 21 ? A -3.841 32.228 -18.678 1 1 A PRO 0.570 1
ATOM 33 C CG . PRO 21 21 ? A -4.930 33.042 -17.976 1 1 A PRO 0.570 1
ATOM 34 C CD . PRO 21 21 ? A -4.273 34.415 -17.860 1 1 A PRO 0.570 1
ATOM 35 N N . ALA 22 22 ? A -0.502 31.643 -18.937 1 1 A ALA 0.600 1
ATOM 36 C CA . ALA 22 22 ? A 0.740 31.498 -19.687 1 1 A ALA 0.600 1
ATOM 37 C C . ALA 22 22 ? A 1.879 32.312 -19.050 1 1 A ALA 0.600 1
ATOM 38 O O . ALA 22 22 ? A 3.030 32.288 -19.492 1 1 A ALA 0.600 1
ATOM 39 C CB . ALA 22 22 ? A 0.578 31.651 -21.228 1 1 A ALA 0.600 1
ATOM 40 N N . GLU 23 23 ? A 1.593 32.949 -17.895 1 1 A GLU 0.580 1
ATOM 41 C CA . GLU 23 23 ? A 2.502 33.792 -17.170 1 1 A GLU 0.580 1
ATOM 42 C C . GLU 23 23 ? A 2.381 33.384 -15.710 1 1 A GLU 0.580 1
ATOM 43 O O . GLU 23 23 ? A 1.294 33.185 -15.173 1 1 A GLU 0.580 1
ATOM 44 C CB . GLU 23 23 ? A 2.147 35.267 -17.452 1 1 A GLU 0.580 1
ATOM 45 C CG . GLU 23 23 ? A 3.353 36.221 -17.433 1 1 A GLU 0.580 1
ATOM 46 C CD . GLU 23 23 ? A 2.977 37.628 -17.886 1 1 A GLU 0.580 1
ATOM 47 O OE1 . GLU 23 23 ? A 2.093 38.241 -17.232 1 1 A GLU 0.580 1
ATOM 48 O OE2 . GLU 23 23 ? A 3.592 38.095 -18.879 1 1 A GLU 0.580 1
ATOM 49 N N . CYS 24 24 ? A 3.517 33.137 -15.040 1 1 A CYS 0.580 1
ATOM 50 C CA . CYS 24 24 ? A 3.557 32.521 -13.733 1 1 A CYS 0.580 1
ATOM 51 C C . CYS 24 24 ? A 4.163 33.535 -12.796 1 1 A CYS 0.580 1
ATOM 52 O O . CYS 24 24 ? A 4.823 34.489 -13.208 1 1 A CYS 0.580 1
ATOM 53 C CB . CYS 24 24 ? A 4.375 31.195 -13.688 1 1 A CYS 0.580 1
ATOM 54 S SG . CYS 24 24 ? A 3.513 29.747 -14.399 1 1 A CYS 0.580 1
ATOM 55 N N . PHE 25 25 ? A 3.934 33.368 -11.484 1 1 A PHE 0.550 1
ATOM 56 C CA . PHE 25 25 ? A 4.462 34.278 -10.498 1 1 A PHE 0.550 1
ATOM 57 C C . PHE 25 25 ? A 5.827 33.764 -10.068 1 1 A PHE 0.550 1
ATOM 58 O O . PHE 25 25 ? A 5.946 32.688 -9.482 1 1 A PHE 0.550 1
ATOM 59 C CB . PHE 25 25 ? A 3.470 34.383 -9.305 1 1 A PHE 0.550 1
ATOM 60 C CG . PHE 25 25 ? A 3.840 35.478 -8.341 1 1 A PHE 0.550 1
ATOM 61 C CD1 . PHE 25 25 ? A 3.968 36.799 -8.794 1 1 A PHE 0.550 1
ATOM 62 C CD2 . PHE 25 25 ? A 4.062 35.202 -6.980 1 1 A PHE 0.550 1
ATOM 63 C CE1 . PHE 25 25 ? A 4.345 37.822 -7.918 1 1 A PHE 0.550 1
ATOM 64 C CE2 . PHE 25 25 ? A 4.420 36.229 -6.096 1 1 A PHE 0.550 1
ATOM 65 C CZ . PHE 25 25 ? A 4.570 37.538 -6.567 1 1 A PHE 0.550 1
ATOM 66 N N . ASP 26 26 ? A 6.899 34.519 -10.381 1 1 A ASP 0.550 1
ATOM 67 C CA . ASP 26 26 ? A 8.235 34.204 -9.933 1 1 A ASP 0.550 1
ATOM 68 C C . ASP 26 26 ? A 8.360 34.610 -8.466 1 1 A ASP 0.550 1
ATOM 69 O O . ASP 26 26 ? A 8.208 35.777 -8.096 1 1 A ASP 0.550 1
ATOM 70 C CB . ASP 26 26 ? A 9.299 34.905 -10.815 1 1 A ASP 0.550 1
ATOM 71 C CG . ASP 26 26 ? A 10.673 34.290 -10.610 1 1 A ASP 0.550 1
ATOM 72 O OD1 . ASP 26 26 ? A 11.045 34.086 -9.425 1 1 A ASP 0.550 1
ATOM 73 O OD2 . ASP 26 26 ? A 11.365 34.036 -11.623 1 1 A ASP 0.550 1
ATOM 74 N N . LEU 27 27 ? A 8.636 33.636 -7.579 1 1 A LEU 0.530 1
ATOM 75 C CA . LEU 27 27 ? A 8.792 33.887 -6.163 1 1 A LEU 0.530 1
ATOM 76 C C . LEU 27 27 ? A 10.112 34.542 -5.802 1 1 A LEU 0.530 1
ATOM 77 O O . LEU 27 27 ? A 10.200 35.218 -4.777 1 1 A LEU 0.530 1
ATOM 78 C CB . LEU 27 27 ? A 8.611 32.578 -5.361 1 1 A LEU 0.530 1
ATOM 79 C CG . LEU 27 27 ? A 7.142 32.114 -5.278 1 1 A LEU 0.530 1
ATOM 80 C CD1 . LEU 27 27 ? A 7.056 30.691 -4.708 1 1 A LEU 0.530 1
ATOM 81 C CD2 . LEU 27 27 ? A 6.285 33.082 -4.442 1 1 A LEU 0.530 1
ATOM 82 N N . LEU 28 28 ? A 11.153 34.390 -6.644 1 1 A LEU 0.410 1
ATOM 83 C CA . LEU 28 28 ? A 12.437 35.020 -6.439 1 1 A LEU 0.410 1
ATOM 84 C C . LEU 28 28 ? A 12.370 36.504 -6.771 1 1 A LEU 0.410 1
ATOM 85 O O . LEU 28 28 ? A 12.857 37.354 -6.026 1 1 A LEU 0.410 1
ATOM 86 C CB . LEU 28 28 ? A 13.517 34.289 -7.277 1 1 A LEU 0.410 1
ATOM 87 C CG . LEU 28 28 ? A 14.943 34.863 -7.171 1 1 A LEU 0.410 1
ATOM 88 C CD1 . LEU 28 28 ? A 15.493 34.817 -5.735 1 1 A LEU 0.410 1
ATOM 89 C CD2 . LEU 28 28 ? A 15.878 34.151 -8.162 1 1 A LEU 0.410 1
ATOM 90 N N . VAL 29 29 ? A 11.711 36.857 -7.896 1 1 A VAL 0.540 1
ATOM 91 C CA . VAL 29 29 ? A 11.717 38.229 -8.383 1 1 A VAL 0.540 1
ATOM 92 C C . VAL 29 29 ? A 10.494 39.013 -7.896 1 1 A VAL 0.540 1
ATOM 93 O O . VAL 29 29 ? A 10.480 40.241 -7.898 1 1 A VAL 0.540 1
ATOM 94 C CB . VAL 29 29 ? A 11.817 38.268 -9.914 1 1 A VAL 0.540 1
ATOM 95 C CG1 . VAL 29 29 ? A 12.197 39.684 -10.385 1 1 A VAL 0.540 1
ATOM 96 C CG2 . VAL 29 29 ? A 12.904 37.290 -10.399 1 1 A VAL 0.540 1
ATOM 97 N N . ARG 30 30 ? A 9.438 38.310 -7.418 1 1 A ARG 0.530 1
ATOM 98 C CA . ARG 30 30 ? A 8.167 38.875 -6.971 1 1 A ARG 0.530 1
ATOM 99 C C . ARG 30 30 ? A 7.417 39.531 -8.129 1 1 A ARG 0.530 1
ATOM 100 O O . ARG 30 30 ? A 6.781 40.573 -7.985 1 1 A ARG 0.530 1
ATOM 101 C CB . ARG 30 30 ? A 8.317 39.822 -5.741 1 1 A ARG 0.530 1
ATOM 102 C CG . ARG 30 30 ? A 9.091 39.213 -4.547 1 1 A ARG 0.530 1
ATOM 103 C CD . ARG 30 30 ? A 8.372 38.106 -3.777 1 1 A ARG 0.530 1
ATOM 104 N NE . ARG 30 30 ? A 7.209 38.780 -3.111 1 1 A ARG 0.530 1
ATOM 105 C CZ . ARG 30 30 ? A 6.279 38.145 -2.388 1 1 A ARG 0.530 1
ATOM 106 N NH1 . ARG 30 30 ? A 6.330 36.827 -2.225 1 1 A ARG 0.530 1
ATOM 107 N NH2 . ARG 30 30 ? A 5.295 38.834 -1.812 1 1 A ARG 0.530 1
ATOM 108 N N . HIS 31 31 ? A 7.466 38.876 -9.307 1 1 A HIS 0.580 1
ATOM 109 C CA . HIS 31 31 ? A 7.095 39.435 -10.592 1 1 A HIS 0.580 1
ATOM 110 C C . HIS 31 31 ? A 6.299 38.420 -11.377 1 1 A HIS 0.580 1
ATOM 111 O O . HIS 31 31 ? A 6.283 37.228 -11.067 1 1 A HIS 0.580 1
ATOM 112 C CB . HIS 31 31 ? A 8.336 39.825 -11.445 1 1 A HIS 0.580 1
ATOM 113 C CG . HIS 31 31 ? A 8.459 41.287 -11.711 1 1 A HIS 0.580 1
ATOM 114 N ND1 . HIS 31 31 ? A 7.414 41.931 -12.340 1 1 A HIS 0.580 1
ATOM 115 C CD2 . HIS 31 31 ? A 9.490 42.147 -11.504 1 1 A HIS 0.580 1
ATOM 116 C CE1 . HIS 31 31 ? A 7.825 43.173 -12.498 1 1 A HIS 0.580 1
ATOM 117 N NE2 . HIS 31 31 ? A 9.076 43.358 -12.010 1 1 A HIS 0.580 1
ATOM 118 N N . CYS 32 32 ? A 5.632 38.882 -12.447 1 1 A CYS 0.580 1
ATOM 119 C CA . CYS 32 32 ? A 4.904 38.040 -13.373 1 1 A CYS 0.580 1
ATOM 120 C C . CYS 32 32 ? A 5.812 37.822 -14.556 1 1 A CYS 0.580 1
ATOM 121 O O . CYS 32 32 ? A 6.333 38.775 -15.133 1 1 A CYS 0.580 1
ATOM 122 C CB . CYS 32 32 ? A 3.588 38.699 -13.857 1 1 A CYS 0.580 1
ATOM 123 S SG . CYS 32 32 ? A 2.301 38.708 -12.576 1 1 A CYS 0.580 1
ATOM 124 N N . VAL 33 33 ? A 6.068 36.555 -14.915 1 1 A VAL 0.580 1
ATOM 125 C CA . VAL 33 33 ? A 6.997 36.223 -15.973 1 1 A VAL 0.580 1
ATOM 126 C C . VAL 33 33 ? A 6.444 35.045 -16.726 1 1 A VAL 0.580 1
ATOM 127 O O . VAL 33 33 ? A 5.748 34.204 -16.162 1 1 A VAL 0.580 1
ATOM 128 C CB . VAL 33 33 ? A 8.405 35.848 -15.501 1 1 A VAL 0.580 1
ATOM 129 C CG1 . VAL 33 33 ? A 9.115 37.101 -14.958 1 1 A VAL 0.580 1
ATOM 130 C CG2 . VAL 33 33 ? A 8.395 34.698 -14.470 1 1 A VAL 0.580 1
ATOM 131 N N . ALA 34 34 ? A 6.718 34.939 -18.043 1 1 A ALA 0.590 1
ATOM 132 C CA . ALA 34 34 ? A 6.287 33.812 -18.854 1 1 A ALA 0.590 1
ATOM 133 C C . ALA 34 34 ? A 6.601 32.445 -18.228 1 1 A ALA 0.590 1
ATOM 134 O O . ALA 34 34 ? A 7.745 32.171 -17.858 1 1 A ALA 0.590 1
ATOM 135 C CB . ALA 34 34 ? A 6.927 33.900 -20.258 1 1 A ALA 0.590 1
ATOM 136 N N . CYS 35 35 ? A 5.604 31.529 -18.109 1 1 A CYS 0.530 1
ATOM 137 C CA . CYS 35 35 ? A 5.782 30.253 -17.398 1 1 A CYS 0.530 1
ATOM 138 C C . CYS 35 35 ? A 6.814 29.333 -18.038 1 1 A CYS 0.530 1
ATOM 139 O O . CYS 35 35 ? A 7.275 28.378 -17.437 1 1 A CYS 0.530 1
ATOM 140 C CB . CYS 35 35 ? A 4.487 29.403 -17.289 1 1 A CYS 0.530 1
ATOM 141 S SG . CYS 35 35 ? A 3.133 30.167 -16.353 1 1 A CYS 0.530 1
ATOM 142 N N . GLY 36 36 ? A 7.227 29.639 -19.283 1 1 A GLY 0.550 1
ATOM 143 C CA . GLY 36 36 ? A 8.277 28.933 -20.004 1 1 A GLY 0.550 1
ATOM 144 C C . GLY 36 36 ? A 9.669 29.106 -19.444 1 1 A GLY 0.550 1
ATOM 145 O O . GLY 36 36 ? A 10.565 28.326 -19.753 1 1 A GLY 0.550 1
ATOM 146 N N . LEU 37 37 ? A 9.895 30.140 -18.610 1 1 A LEU 0.540 1
ATOM 147 C CA . LEU 37 37 ? A 11.182 30.378 -17.983 1 1 A LEU 0.540 1
ATOM 148 C C . LEU 37 37 ? A 11.440 29.469 -16.782 1 1 A LEU 0.540 1
ATOM 149 O O . LEU 37 37 ? A 12.584 29.178 -16.440 1 1 A LEU 0.540 1
ATOM 150 C CB . LEU 37 37 ? A 11.274 31.864 -17.551 1 1 A LEU 0.540 1
ATOM 151 C CG . LEU 37 37 ? A 11.211 32.872 -18.721 1 1 A LEU 0.540 1
ATOM 152 C CD1 . LEU 37 37 ? A 10.967 34.295 -18.199 1 1 A LEU 0.540 1
ATOM 153 C CD2 . LEU 37 37 ? A 12.467 32.811 -19.603 1 1 A LEU 0.540 1
ATOM 154 N N . LEU 38 38 ? A 10.376 28.959 -16.132 1 1 A LEU 0.510 1
ATOM 155 C CA . LEU 38 38 ? A 10.471 28.180 -14.914 1 1 A LEU 0.510 1
ATOM 156 C C . LEU 38 38 ? A 9.945 26.800 -15.256 1 1 A LEU 0.510 1
ATOM 157 O O . LEU 38 38 ? A 8.818 26.645 -15.708 1 1 A LEU 0.510 1
ATOM 158 C CB . LEU 38 38 ? A 9.603 28.729 -13.740 1 1 A LEU 0.510 1
ATOM 159 C CG . LEU 38 38 ? A 10.016 30.076 -13.094 1 1 A LEU 0.510 1
ATOM 160 C CD1 . LEU 38 38 ? A 9.908 31.316 -13.993 1 1 A LEU 0.510 1
ATOM 161 C CD2 . LEU 38 38 ? A 9.173 30.339 -11.836 1 1 A LEU 0.510 1
ATOM 162 N N . ARG 39 39 ? A 10.747 25.741 -15.058 1 1 A ARG 0.260 1
ATOM 163 C CA . ARG 39 39 ? A 10.330 24.396 -15.395 1 1 A ARG 0.260 1
ATOM 164 C C . ARG 39 39 ? A 9.932 23.709 -14.106 1 1 A ARG 0.260 1
ATOM 165 O O . ARG 39 39 ? A 10.779 23.480 -13.242 1 1 A ARG 0.260 1
ATOM 166 C CB . ARG 39 39 ? A 11.488 23.628 -16.083 1 1 A ARG 0.260 1
ATOM 167 C CG . ARG 39 39 ? A 12.055 24.373 -17.312 1 1 A ARG 0.260 1
ATOM 168 C CD . ARG 39 39 ? A 13.252 23.697 -17.986 1 1 A ARG 0.260 1
ATOM 169 N NE . ARG 39 39 ? A 12.735 22.455 -18.646 1 1 A ARG 0.260 1
ATOM 170 C CZ . ARG 39 39 ? A 13.468 21.668 -19.447 1 1 A ARG 0.260 1
ATOM 171 N NH1 . ARG 39 39 ? A 14.743 21.949 -19.702 1 1 A ARG 0.260 1
ATOM 172 N NH2 . ARG 39 39 ? A 12.927 20.586 -20.001 1 1 A ARG 0.260 1
ATOM 173 N N . THR 40 40 ? A 8.633 23.421 -13.938 1 1 A THR 0.250 1
ATOM 174 C CA . THR 40 40 ? A 8.067 22.885 -12.716 1 1 A THR 0.250 1
ATOM 175 C C . THR 40 40 ? A 7.265 21.596 -13.008 1 1 A THR 0.250 1
ATOM 176 O O . THR 40 40 ? A 7.152 21.214 -14.205 1 1 A THR 0.250 1
ATOM 177 C CB . THR 40 40 ? A 7.162 23.883 -11.988 1 1 A THR 0.250 1
ATOM 178 O OG1 . THR 40 40 ? A 6.162 24.470 -12.814 1 1 A THR 0.250 1
ATOM 179 C CG2 . THR 40 40 ? A 8.023 25.056 -11.500 1 1 A THR 0.250 1
ATOM 180 O OXT . THR 40 40 ? A 6.771 20.973 -12.027 1 1 A THR 0.250 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
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loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.501
2 1 3 0.083
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loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 17 THR 1 0.150
2 1 A 18 PRO 1 0.270
3 1 A 19 CYS 1 0.600
4 1 A 20 VAL 1 0.600
5 1 A 21 PRO 1 0.570
6 1 A 22 ALA 1 0.600
7 1 A 23 GLU 1 0.580
8 1 A 24 CYS 1 0.580
9 1 A 25 PHE 1 0.550
10 1 A 26 ASP 1 0.550
11 1 A 27 LEU 1 0.530
12 1 A 28 LEU 1 0.410
13 1 A 29 VAL 1 0.540
14 1 A 30 ARG 1 0.530
15 1 A 31 HIS 1 0.580
16 1 A 32 CYS 1 0.580
17 1 A 33 VAL 1 0.580
18 1 A 34 ALA 1 0.590
19 1 A 35 CYS 1 0.530
20 1 A 36 GLY 1 0.550
21 1 A 37 LEU 1 0.540
22 1 A 38 LEU 1 0.510
23 1 A 39 ARG 1 0.260
24 1 A 40 THR 1 0.250
#
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loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
;This SWISS-MODEL protein model is copyright.
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can copy and redistribute the model in any medium or format,
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CC BY-SA 4.0 license at this link:
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;
https://creativecommons.org/licenses/by-sa/4.0/legalcode
2 disclaimer
;The SWISS-MODEL SERVER produces theoretical models for
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;
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#