data_SMR-b3b3e7962d3e8f679ffa0ea4c74fb50a_2
_entry.id SMR-b3b3e7962d3e8f679ffa0ea4c74fb50a_2
_struct.entry_id SMR-b3b3e7962d3e8f679ffa0ea4c74fb50a_2
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - A0A090AX27/ A0A090AX27_RAT, Vasoactive intestinal polypeptide
  - A0A090BZQ0/ A0A090BZQ0_RAT, Vasoactive intestinal polypeptide
  - P01283/ VIP_RAT, VIP peptides

Estimated model accuracy of this model is 0.067, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries A0A090AX27, A0A090BZQ0, P01283'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
UNK 'L-peptide linking' UNKNOWN . . 'CCD local'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 22148.171 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP VIP_RAT P01283 1
;MESRSKPQFLAILTLFSVLFSQSLAWPLYGPPSSVRLDDRLQFEGAGDPDQVSLKADSDILQNALAENDT
PYYDVSRNARHADGVFTSDYSRLLGQISAKKYLESLIGKRISSSISEDPVPVKRHSDAVFTDNYTRLRKQ
MAVKKYLNSILNGKRSSEGDSPDFLEELEK
;
'VIP peptides'
2 1 UNP A0A090BZQ0_RAT A0A090BZQ0 1
;MESRSKPQFLAILTLFSVLFSQSLAWPLYGPPSSVRLDDRLQFEGAGDPDQVSLKADSDILQNALAENDT
PYYDVSRNARHADGVFTSDYSRLLGQISAKKYLESLIGKRISSSISEDPVPVKRHSDAVFTDNYTRLRKQ
MAVKKYLNSILNGKRSSEGDSPDFLEELEK
;
'Vasoactive intestinal polypeptide'
3 1 UNP A0A090AX27_RAT A0A090AX27 1
;MESRSKPQFLAILTLFSVLFSQSLAWPLYGPPSSVRLDDRLQFEGAGDPDQVSLKADSDILQNALAENDT
PYYDVSRNARHADGVFTSDYSRLLGQISAKKYLESLIGKRISSSISEDPVPVKRHSDAVFTDNYTRLRKQ
MAVKKYLNSILNGKRSSEGDSPDFLEELEK
;
'Vasoactive intestinal polypeptide'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 170 1 170
2 2 1 170 1 170
3 3 1 170 1 170
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . VIP_RAT P01283 . 1 170 10116 'Rattus norvegicus (Rat)' 1993-10-01
202AEE82EBBD190B
1 UNP . A0A090BZQ0_RAT A0A090BZQ0 . 1 170 10116 'Rattus norvegicus (Rat)'
2014-11-26 202AEE82EBBD190B
1 UNP . A0A090AX27_RAT A0A090AX27 . 1 170 10116 'Rattus norvegicus (Rat)'
2023-09-13 202AEE82EBBD190B
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A
;MESRSKPQFLAILTLFSVLFSQSLAWPLYGPPSSVRLDDRLQFEGAGDPDQVSLKADSDILQNALAENDT
PYYDVSRNARHADGVFTSDYSRLLGQISAKKYLESLIGKRISSSISEDPVPVKRHSDAVFTDNYTRLRKQ
MAVKKYLNSILNGKRSSEGDSPDFLEELEK
;

;MESRSKPQFLAILTLFSVLFSQSLAWPLYGPPSSVRLDDRLQFEGAGDPDQVSLKADSDILQNALAENDT
PYYDVSRNARHADGVFTSDYSRLLGQISAKKYLESLIGKRISSSISEDPVPVKRHSDAVFTDNYTRLRKQ
MAVKKYLNSILNGKRSSEGDSPDFLEELEK
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 GLU .
1 3 SER .
1 4 ARG .
1 5 SER .
1 6 LYS .
1 7 PRO .
1 8 GLN .
1 9 PHE .
1 10 LEU .
1 11 ALA .
1 12 ILE .
1 13 LEU .
1 14 THR .
1 15 LEU .
1 16 PHE .
1 17 SER .
1 18 VAL .
1 19 LEU .
1 20 PHE .
1 21 SER .
1 22 GLN .
1 23 SER .
1 24 LEU .
1 25 ALA .
1 26 TRP .
1 27 PRO .
1 28 LEU .
1 29 TYR .
1 30 GLY .
1 31 PRO .
1 32 PRO .
1 33 SER .
1 34 SER .
1 35 VAL .
1 36 ARG .
1 37 LEU .
1 38 ASP .
1 39 ASP .
1 40 ARG .
1 41 LEU .
1 42 GLN .
1 43 PHE .
1 44 GLU .
1 45 GLY .
1 46 ALA .
1 47 GLY .
1 48 ASP .
1 49 PRO .
1 50 ASP .
1 51 GLN .
1 52 VAL .
1 53 SER .
1 54 LEU .
1 55 LYS .
1 56 ALA .
1 57 ASP .
1 58 SER .
1 59 ASP .
1 60 ILE .
1 61 LEU .
1 62 GLN .
1 63 ASN .
1 64 ALA .
1 65 LEU .
1 66 ALA .
1 67 GLU .
1 68 ASN .
1 69 ASP .
1 70 THR .
1 71 PRO .
1 72 TYR .
1 73 TYR .
1 74 ASP .
1 75 VAL .
1 76 SER .
1 77 ARG .
1 78 ASN .
1 79 ALA .
1 80 ARG .
1 81 HIS .
1 82 ALA .
1 83 ASP .
1 84 GLY .
1 85 VAL .
1 86 PHE .
1 87 THR .
1 88 SER .
1 89 ASP .
1 90 TYR .
1 91 SER .
1 92 ARG .
1 93 LEU .
1 94 LEU .
1 95 GLY .
1 96 GLN .
1 97 ILE .
1 98 SER .
1 99 ALA .
1 100 LYS .
1 101 LYS .
1 102 TYR .
1 103 LEU .
1 104 GLU .
1 105 SER .
1 106 LEU .
1 107 ILE .
1 108 GLY .
1 109 LYS .
1 110 ARG .
1 111 ILE .
1 112 SER .
1 113 SER .
1 114 SER .
1 115 ILE .
1 116 SER .
1 117 GLU .
1 118 ASP .
1 119 PRO .
1 120 VAL .
1 121 PRO .
1 122 VAL .
1 123 LYS .
1 124 ARG .
1 125 HIS .
1 126 SER .
1 127 ASP .
1 128 ALA .
1 129 VAL .
1 130 PHE .
1 131 THR .
1 132 ASP .
1 133 ASN .
1 134 TYR .
1 135 THR .
1 136 ARG .
1 137 LEU .
1 138 ARG .
1 139 LYS .
1 140 GLN .
1 141 MET .
1 142 ALA .
1 143 VAL .
1 144 LYS .
1 145 LYS .
1 146 TYR .
1 147 LEU .
1 148 ASN .
1 149 SER .
1 150 ILE .
1 151 LEU .
1 152 ASN .
1 153 GLY .
1 154 LYS .
1 155 ARG .
1 156 SER .
1 157 SER .
1 158 GLU .
1 159 GLY .
1 160 ASP .
1 161 SER .
1 162 PRO .
1 163 ASP .
1 164 PHE .
1 165 LEU .
1 166 GLU .
1 167 GLU .
1 168 LEU .
1 169 GLU .
1 170 LYS .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? A .
A 1 2 GLU 2 ? ? ? A .
A 1 3 SER 3 ? ? ? A .
A 1 4 ARG 4 ? ? ? A .
A 1 5 SER 5 ? ? ? A .
A 1 6 LYS 6 ? ? ? A .
A 1 7 PRO 7 ? ? ? A .
A 1 8 GLN 8 ? ? ? A .
A 1 9 PHE 9 ? ? ? A .
A 1 10 LEU 10 ? ? ? A .
A 1 11 ALA 11 ? ? ? A .
A 1 12 ILE 12 ? ? ? A .
A 1 13 LEU 13 ? ? ? A .
A 1 14 THR 14 ? ? ? A .
A 1 15 LEU 15 ? ? ? A .
A 1 16 PHE 16 ? ? ? A .
A 1 17 SER 17 ? ? ? A .
A 1 18 VAL 18 ? ? ? A .
A 1 19 LEU 19 ? ? ? A .
A 1 20 PHE 20 ? ? ? A .
A 1 21 SER 21 ? ? ? A .
A 1 22 GLN 22 ? ? ? A .
A 1 23 SER 23 ? ? ? A .
A 1 24 LEU 24 ? ? ? A .
A 1 25 ALA 25 ? ? ? A .
A 1 26 TRP 26 ? ? ? A .
A 1 27 PRO 27 ? ? ? A .
A 1 28 LEU 28 ? ? ? A .
A 1 29 TYR 29 ? ? ? A .
A 1 30 GLY 30 ? ? ? A .
A 1 31 PRO 31 ? ? ? A .
A 1 32 PRO 32 ? ? ? A .
A 1 33 SER 33 ? ? ? A .
A 1 34 SER 34 ? ? ? A .
A 1 35 VAL 35 ? ? ? A .
A 1 36 ARG 36 ? ? ? A .
A 1 37 LEU 37 ? ? ? A .
A 1 38 ASP 38 ? ? ? A .
A 1 39 ASP 39 ? ? ? A .
A 1 40 ARG 40 ? ? ? A .
A 1 41 LEU 41 ? ? ? A .
A 1 42 GLN 42 ? ? ? A .
A 1 43 PHE 43 ? ? ? A .
A 1 44 GLU 44 ? ? ? A .
A 1 45 GLY 45 ? ? ? A .
A 1 46 ALA 46 ? ? ? A .
A 1 47 GLY 47 ? ? ? A .
A 1 48 ASP 48 ? ? ? A .
A 1 49 PRO 49 ? ? ? A .
A 1 50 ASP 50 ? ? ? A .
A 1 51 GLN 51 ? ? ? A .
A 1 52 VAL 52 ? ? ? A .
A 1 53 SER 53 ? ? ? A .
A 1 54 LEU 54 ? ? ? A .
A 1 55 LYS 55 ? ? ? A .
A 1 56 ALA 56 ? ? ? A .
A 1 57 ASP 57 ? ? ? A .
A 1 58 SER 58 ? ? ? A .
A 1 59 ASP 59 ? ? ? A .
A 1 60 ILE 60 ? ? ? A .
A 1 61 LEU 61 ? ? ? A .
A 1 62 GLN 62 ? ? ? A .
A 1 63 ASN 63 ? ? ? A .
A 1 64 ALA 64 ? ? ? A .
A 1 65 LEU 65 ? ? ? A .
A 1 66 ALA 66 ? ? ? A .
A 1 67 GLU 67 ? ? ? A .
A 1 68 ASN 68 ? ? ? A .
A 1 69 ASP 69 ? ? ? A .
A 1 70 THR 70 ? ? ? A .
A 1 71 PRO 71 ? ? ? A .
A 1 72 TYR 72 ? ? ? A .
A 1 73 TYR 73 ? ? ? A .
A 1 74 ASP 74 ? ? ? A .
A 1 75 VAL 75 ? ? ? A .
A 1 76 SER 76 ? ? ? A .
A 1 77 ARG 77 ? ? ? A .
A 1 78 ASN 78 ? ? ? A .
A 1 79 ALA 79 ? ? ? A .
A 1 80 ARG 80 ? ? ? A .
A 1 81 HIS 81 ? ? ? A .
A 1 82 ALA 82 ? ? ? A .
A 1 83 ASP 83 ? ? ? A .
A 1 84 GLY 84 ? ? ? A .
A 1 85 VAL 85 ? ? ? A .
A 1 86 PHE 86 ? ? ? A .
A 1 87 THR 87 ? ? ? A .
A 1 88 SER 88 ? ? ? A .
A 1 89 ASP 89 ? ? ? A .
A 1 90 TYR 90 ? ? ? A .
A 1 91 SER 91 ? ? ? A .
A 1 92 ARG 92 ? ? ? A .
A 1 93 LEU 93 ? ? ? A .
A 1 94 LEU 94 ? ? ? A .
A 1 95 GLY 95 ? ? ? A .
A 1 96 GLN 96 ? ? ? A .
A 1 97 ILE 97 ? ? ? A .
A 1 98 SER 98 ? ? ? A .
A 1 99 ALA 99 ? ? ? A .
A 1 100 LYS 100 ? ? ? A .
A 1 101 LYS 101 ? ? ? A .
A 1 102 TYR 102 ? ? ? A .
A 1 103 LEU 103 ? ? ? A .
A 1 104 GLU 104 ? ? ? A .
A 1 105 SER 105 ? ? ? A .
A 1 106 LEU 106 ? ? ? A .
A 1 107 ILE 107 ? ? ? A .
A 1 108 GLY 108 ? ? ? A .
A 1 109 LYS 109 ? ? ? A .
A 1 110 ARG 110 ? ? ? A .
A 1 111 ILE 111 ? ? ? A .
A 1 112 SER 112 ? ? ? A .
A 1 113 SER 113 ? ? ? A .
A 1 114 SER 114 ? ? ? A .
A 1 115 ILE 115 ? ? ? A .
A 1 116 SER 116 ? ? ? A .
A 1 117 GLU 117 ? ? ? A .
A 1 118 ASP 118 ? ? ? A .
A 1 119 PRO 119 ? ? ? A .
A 1 120 VAL 120 ? ? ? A .
A 1 121 PRO 121 ? ? ? A .
A 1 122 VAL 122 ? ? ? A .
A 1 123 LYS 123 ? ? ? A .
A 1 124 ARG 124 ? ? ? A .
A 1 125 HIS 125 125 HIS HIS A .
A 1 126 SER 126 126 SER SER A .
A 1 127 ASP 127 127 ASP ASP A .
A 1 128 ALA 128 128 ALA ALA A .
A 1 129 VAL 129 129 VAL VAL A .
A 1 130 PHE 130 130 PHE PHE A .
A 1 131 THR 131 131 THR THR A .
A 1 132 ASP 132 132 ASP ASP A .
A 1 133 ASN 133 133 ASN ASN A .
A 1 134 TYR 134 134 TYR TYR A .
A 1 135 THR 135 135 THR THR A .
A 1 136 ARG 136 136 ARG ARG A .
A 1 137 LEU 137 137 LEU LEU A .
A 1 138 ARG 138 138 ARG ARG A .
A 1 139 LYS 139 139 LYS LYS A .
A 1 140 GLN 140 140 GLN GLN A .
A 1 141 MET 141 141 MET MET A .
A 1 142 ALA 142 142 ALA ALA A .
A 1 143 VAL 143 143 VAL VAL A .
A 1 144 LYS 144 144 LYS LYS A .
A 1 145 LYS 145 145 LYS LYS A .
A 1 146 TYR 146 146 TYR TYR A .
A 1 147 LEU 147 147 LEU LEU A .
A 1 148 ASN 148 148 ASN ASN A .
A 1 149 SER 149 149 SER SER A .
A 1 150 ILE 150 150 ILE ILE A .
A 1 151 LEU 151 151 LEU LEU A .
A 1 152 ASN 152 152 ASN ASN A .
A 1 153 GLY 153 153 GLY GLY A .
A 1 154 LYS 154 154 LYS LYS A .
A 1 155 ARG 155 155 ARG ARG A .
A 1 156 SER 156 156 SER SER A .
A 1 157 SER 157 157 SER SER A .
A 1 158 GLU 158 158 GLU GLU A .
A 1 159 GLY 159 ? ? ? A .
A 1 160 ASP 160 ? ? ? A .
A 1 161 SER 161 ? ? ? A .
A 1 162 PRO 162 ? ? ? A .
A 1 163 ASP 163 ? ? ? A .
A 1 164 PHE 164 ? ? ? A .
A 1 165 LEU 165 ? ? ? A .
A 1 166 GLU 166 ? ? ? A .
A 1 167 GLU 167 ? ? ? A .
A 1 168 LEU 168 ? ? ? A .
A 1 169 GLU 169 ? ? ? A .
A 1 170 LYS 170 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Pituitary adenylate cyclase activating polypeptide-38 {PDB ID=2d2p, label_asym_id=A, auth_asym_id=A, SMTL ID=2d2p.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 2d2p, label_asym_id=A'
'target-template alignment' .
4 'model 2' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-14
6 PDB https://www.wwpdb.org . 2024-11-08
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 HSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNK(UNK)
HSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNKX
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 1 34
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 2d2p 2024-10-30
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 170
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 170 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 2.1e-12 55.882
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MESRSKPQFLAILTLFSVLFSQSLAWPLYGPPSSVRLDDRLQFEGAGDPDQVSLKADSDILQNALAENDTPYYDVSRNARHADGVFTSDYSRLLGQISAKKYLESLIGKRISSSISEDPVPVKRHSDAVFTDNYTRLRKQMAVKKYLNSILNGKRSSEGDSPDFLEELEK
2 1 2
----------------------------------------------------------------------------------------------------------------------------HSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQR------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 2d2p.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 2' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . HIS 125 125 ? A 11.805 -9.193 -18.938 1 1 A HIS 0.320 1
ATOM 2 C CA . HIS 125 125 ? A 13.202 -9.223 -18.377 1 1 A HIS 0.320 1
ATOM 3 C C . HIS 125 125 ? A 13.776 -7.805 -18.416 1 1 A HIS 0.320 1
ATOM 4 O O . HIS 125 125 ? A 13.325 -7.040 -19.258 1 1 A HIS 0.320 1
ATOM 5 C CB . HIS 125 125 ? A 14.068 -10.182 -19.225 1 1 A HIS 0.320 1
ATOM 6 C CG . HIS 125 125 ? A 15.435 -10.348 -18.660 1 1 A HIS 0.320 1
ATOM 7 N ND1 . HIS 125 125 ? A 16.407 -9.544 -19.191 1 1 A HIS 0.320 1
ATOM 8 C CD2 . HIS 125 125 ? A 15.923 -11.060 -17.611 1 1 A HIS 0.320 1
ATOM 9 C CE1 . HIS 125 125 ? A 17.484 -9.772 -18.472 1 1 A HIS 0.320 1
ATOM 10 N NE2 . HIS 125 125 ? A 17.245 -10.684 -17.498 1 1 A HIS 0.320 1
ATOM 11 N N . SER 126 126 ? A 14.720 -7.433 -17.527 1 1 A SER 0.400 1
ATOM 12 C CA . SER 126 126 ? A 15.324 -6.105 -17.467 1 1 A SER 0.400 1
ATOM 13 C C . SER 126 126 ? A 16.609 -6.301 -16.679 1 1 A SER 0.400 1
ATOM 14 O O . SER 126 126 ? A 16.720 -7.279 -15.941 1 1 A SER 0.400 1
ATOM 15 C CB . SER 126 126 ? A 14.496 -5.014 -16.703 1 1 A SER 0.400 1
ATOM 16 O OG . SER 126 126 ? A 13.274 -4.684 -17.361 1 1 A SER 0.400 1
ATOM 17 N N . ASP 127 127 ? A 17.581 -5.371 -16.768 1 1 A ASP 0.250 1
ATOM 18 C CA . ASP 127 127 ? A 18.903 -5.399 -16.139 1 1 A ASP 0.250 1
ATOM 19 C C . ASP 127 127 ? A 18.946 -5.578 -14.632 1 1 A ASP 0.250 1
ATOM 20 O O . ASP 127 127 ? A 19.885 -6.126 -14.054 1 1 A ASP 0.250 1
ATOM 21 C CB . ASP 127 127 ? A 19.596 -4.061 -16.459 1 1 A ASP 0.250 1
ATOM 22 C CG . ASP 127 127 ? A 19.781 -4.037 -17.960 1 1 A ASP 0.250 1
ATOM 23 O OD1 . ASP 127 127 ? A 20.829 -4.534 -18.435 1 1 A ASP 0.250 1
ATOM 24 O OD2 . ASP 127 127 ? A 18.809 -3.600 -18.632 1 1 A ASP 0.250 1
ATOM 25 N N . ALA 128 128 ? A 17.904 -5.092 -13.955 1 1 A ALA 0.390 1
ATOM 26 C CA . ALA 128 128 ? A 17.821 -5.105 -12.525 1 1 A ALA 0.390 1
ATOM 27 C C . ALA 128 128 ? A 16.349 -4.999 -12.174 1 1 A ALA 0.390 1
ATOM 28 O O . ALA 128 128 ? A 15.855 -3.959 -11.757 1 1 A ALA 0.390 1
ATOM 29 C CB . ALA 128 128 ? A 18.662 -3.974 -11.893 1 1 A ALA 0.390 1
ATOM 30 N N . VAL 129 129 ? A 15.584 -6.100 -12.359 1 1 A VAL 0.540 1
ATOM 31 C CA . VAL 129 129 ? A 14.133 -6.199 -12.158 1 1 A VAL 0.540 1
ATOM 32 C C . VAL 129 129 ? A 13.661 -5.723 -10.781 1 1 A VAL 0.540 1
ATOM 33 O O . VAL 129 129 ? A 12.569 -5.181 -10.611 1 1 A VAL 0.540 1
ATOM 34 C CB . VAL 129 129 ? A 13.694 -7.636 -12.442 1 1 A VAL 0.540 1
ATOM 35 C CG1 . VAL 129 129 ? A 12.210 -7.892 -12.126 1 1 A VAL 0.540 1
ATOM 36 C CG2 . VAL 129 129 ? A 13.949 -7.939 -13.931 1 1 A VAL 0.540 1
ATOM 37 N N . PHE 130 130 ? A 14.540 -5.840 -9.768 1 1 A PHE 0.490 1
ATOM 38 C CA . PHE 130 130 ? A 14.431 -5.298 -8.421 1 1 A PHE 0.490 1
ATOM 39 C C . PHE 130 130 ? A 14.028 -3.818 -8.351 1 1 A PHE 0.490 1
ATOM 40 O O . PHE 130 130 ? A 13.283 -3.415 -7.458 1 1 A PHE 0.490 1
ATOM 41 C CB . PHE 130 130 ? A 15.771 -5.534 -7.680 1 1 A PHE 0.490 1
ATOM 42 C CG . PHE 130 130 ? A 16.149 -6.992 -7.746 1 1 A PHE 0.490 1
ATOM 43 C CD1 . PHE 130 130 ? A 15.428 -7.949 -7.012 1 1 A PHE 0.490 1
ATOM 44 C CD2 . PHE 130 130 ? A 17.213 -7.419 -8.559 1 1 A PHE 0.490 1
ATOM 45 C CE1 . PHE 130 130 ? A 15.772 -9.305 -7.075 1 1 A PHE 0.490 1
ATOM 46 C CE2 . PHE 130 130 ? A 17.559 -8.775 -8.626 1 1 A PHE 0.490 1
ATOM 47 C CZ . PHE 130 130 ? A 16.842 -9.717 -7.879 1 1 A PHE 0.490 1
ATOM 48 N N . THR 131 131 ? A 14.449 -3.006 -9.346 1 1 A THR 0.490 1
ATOM 49 C CA . THR 131 131 ? A 14.075 -1.603 -9.567 1 1 A THR 0.490 1
ATOM 50 C C . THR 131 131 ? A 12.566 -1.383 -9.725 1 1 A THR 0.490 1
ATOM 51 O O . THR 131 131 ? A 12.043 -0.351 -9.307 1 1 A THR 0.490 1
ATOM 52 C CB . THR 131 131 ? A 14.836 -0.998 -10.757 1 1 A THR 0.490 1
ATOM 53 O OG1 . THR 131 131 ? A 16.230 -1.244 -10.619 1 1 A THR 0.490 1
ATOM 54 C CG2 . THR 131 131 ? A 14.718 0.530 -10.858 1 1 A THR 0.490 1
ATOM 55 N N . ASP 132 132 ? A 11.815 -2.361 -10.297 1 1 A ASP 0.590 1
ATOM 56 C CA . ASP 132 132 ? A 10.366 -2.290 -10.453 1 1 A ASP 0.590 1
ATOM 57 C C . ASP 132 132 ? A 9.629 -3.154 -9.415 1 1 A ASP 0.590 1
ATOM 58 O O . ASP 132 132 ? A 8.537 -2.808 -8.968 1 1 A ASP 0.590 1
ATOM 59 C CB . ASP 132 132 ? A 9.980 -2.702 -11.896 1 1 A ASP 0.590 1
ATOM 60 C CG . ASP 132 132 ? A 8.503 -2.470 -12.152 1 1 A ASP 0.590 1
ATOM 61 O OD1 . ASP 132 132 ? A 8.018 -1.321 -12.019 1 1 A ASP 0.590 1
ATOM 62 O OD2 . ASP 132 132 ? A 7.813 -3.478 -12.454 1 1 A ASP 0.590 1
ATOM 63 N N . ASN 133 133 ? A 10.227 -4.261 -8.909 1 1 A ASN 0.610 1
ATOM 64 C CA . ASN 133 133 ? A 9.646 -5.064 -7.826 1 1 A ASN 0.610 1
ATOM 65 C C . ASN 133 133 ? A 9.431 -4.251 -6.550 1 1 A ASN 0.610 1
ATOM 66 O O . ASN 133 133 ? A 8.461 -4.439 -5.816 1 1 A ASN 0.610 1
ATOM 67 C CB . ASN 133 133 ? A 10.482 -6.332 -7.500 1 1 A ASN 0.610 1
ATOM 68 C CG . ASN 133 133 ? A 10.323 -7.363 -8.614 1 1 A ASN 0.610 1
ATOM 69 O OD1 . ASN 133 133 ? A 9.384 -7.329 -9.405 1 1 A ASN 0.610 1
ATOM 70 N ND2 . ASN 133 133 ? A 11.247 -8.352 -8.664 1 1 A ASN 0.610 1
ATOM 71 N N . TYR 134 134 ? A 10.319 -3.273 -6.301 1 1 A TYR 0.630 1
ATOM 72 C CA . TYR 134 134 ? A 10.175 -2.261 -5.272 1 1 A TYR 0.630 1
ATOM 73 C C . TYR 134 134 ? A 8.888 -1.424 -5.423 1 1 A TYR 0.630 1
ATOM 74 O O . TYR 134 134 ? A 8.145 -1.212 -4.463 1 1 A TYR 0.630 1
ATOM 75 C CB . TYR 134 134 ? A 11.443 -1.375 -5.368 1 1 A TYR 0.630 1
ATOM 76 C CG . TYR 134 134 ? A 11.661 -0.381 -4.260 1 1 A TYR 0.630 1
ATOM 77 C CD1 . TYR 134 134 ? A 11.102 -0.496 -2.973 1 1 A TYR 0.630 1
ATOM 78 C CD2 . TYR 134 134 ? A 12.527 0.688 -4.530 1 1 A TYR 0.630 1
ATOM 79 C CE1 . TYR 134 134 ? A 11.388 0.462 -1.988 1 1 A TYR 0.630 1
ATOM 80 C CE2 . TYR 134 134 ? A 12.814 1.645 -3.551 1 1 A TYR 0.630 1
ATOM 81 C CZ . TYR 134 134 ? A 12.241 1.533 -2.285 1 1 A TYR 0.630 1
ATOM 82 O OH . TYR 134 134 ? A 12.533 2.495 -1.309 1 1 A TYR 0.630 1
ATOM 83 N N . THR 135 135 ? A 8.565 -0.986 -6.660 1 1 A THR 0.600 1
ATOM 84 C CA . THR 135 135 ? A 7.313 -0.318 -7.051 1 1 A THR 0.600 1
ATOM 85 C C . THR 135 135 ? A 6.102 -1.210 -6.864 1 1 A THR 0.600 1
ATOM 86 O O . THR 135 135 ? A 5.055 -0.778 -6.380 1 1 A THR 0.600 1
ATOM 87 C CB . THR 135 135 ? A 7.326 0.197 -8.495 1 1 A THR 0.600 1
ATOM 88 O OG1 . THR 135 135 ? A 8.352 1.163 -8.641 1 1 A THR 0.600 1
ATOM 89 C CG2 . THR 135 135 ? A 6.019 0.902 -8.904 1 1 A THR 0.600 1
ATOM 90 N N . ARG 136 136 ? A 6.209 -2.513 -7.199 1 1 A ARG 0.530 1
ATOM 91 C CA . ARG 136 136 ? A 5.139 -3.476 -6.983 1 1 A ARG 0.530 1
ATOM 92 C C . ARG 136 136 ? A 4.726 -3.621 -5.519 1 1 A ARG 0.530 1
ATOM 93 O O . ARG 136 136 ? A 3.533 -3.658 -5.211 1 1 A ARG 0.530 1
ATOM 94 C CB . ARG 136 136 ? A 5.467 -4.871 -7.581 1 1 A ARG 0.530 1
ATOM 95 C CG . ARG 136 136 ? A 5.823 -4.872 -9.085 1 1 A ARG 0.530 1
ATOM 96 C CD . ARG 136 136 ? A 4.819 -4.173 -10.004 1 1 A ARG 0.530 1
ATOM 97 N NE . ARG 136 136 ? A 5.436 -4.156 -11.355 1 1 A ARG 0.530 1
ATOM 98 C CZ . ARG 136 136 ? A 4.824 -4.300 -12.536 1 1 A ARG 0.530 1
ATOM 99 N NH1 . ARG 136 136 ? A 3.545 -4.632 -12.634 1 1 A ARG 0.530 1
ATOM 100 N NH2 . ARG 136 136 ? A 5.575 -4.116 -13.613 1 1 A ARG 0.530 1
ATOM 101 N N . LEU 137 137 ? A 5.697 -3.662 -4.584 1 1 A LEU 0.570 1
ATOM 102 C CA . LEU 137 137 ? A 5.454 -3.600 -3.147 1 1 A LEU 0.570 1
ATOM 103 C C . LEU 137 137 ? A 4.905 -2.263 -2.666 1 1 A LEU 0.570 1
ATOM 104 O O . LEU 137 137 ? A 3.996 -2.209 -1.842 1 1 A LEU 0.570 1
ATOM 105 C CB . LEU 137 137 ? A 6.718 -3.985 -2.340 1 1 A LEU 0.570 1
ATOM 106 C CG . LEU 137 137 ? A 7.130 -5.463 -2.517 1 1 A LEU 0.570 1
ATOM 107 C CD1 . LEU 137 137 ? A 8.473 -5.771 -1.841 1 1 A LEU 0.570 1
ATOM 108 C CD2 . LEU 137 137 ? A 6.078 -6.425 -1.949 1 1 A LEU 0.570 1
ATOM 109 N N . ARG 138 138 ? A 5.398 -1.126 -3.192 1 1 A ARG 0.480 1
ATOM 110 C CA . ARG 138 138 ? A 4.900 0.198 -2.839 1 1 A ARG 0.480 1
ATOM 111 C C . ARG 138 138 ? A 3.429 0.430 -3.180 1 1 A ARG 0.480 1
ATOM 112 O O . ARG 138 138 ? A 2.714 1.125 -2.456 1 1 A ARG 0.480 1
ATOM 113 C CB . ARG 138 138 ? A 5.791 1.311 -3.439 1 1 A ARG 0.480 1
ATOM 114 C CG . ARG 138 138 ? A 7.101 1.515 -2.647 1 1 A ARG 0.480 1
ATOM 115 C CD . ARG 138 138 ? A 8.071 2.528 -3.266 1 1 A ARG 0.480 1
ATOM 116 N NE . ARG 138 138 ? A 9.168 2.764 -2.267 1 1 A ARG 0.480 1
ATOM 117 C CZ . ARG 138 138 ? A 9.122 3.638 -1.252 1 1 A ARG 0.480 1
ATOM 118 N NH1 . ARG 138 138 ? A 8.057 4.400 -1.045 1 1 A ARG 0.480 1
ATOM 119 N NH2 . ARG 138 138 ? A 10.174 3.763 -0.451 1 1 A ARG 0.480 1
ATOM 120 N N . LYS 139 139 ? A 2.920 -0.192 -4.263 1 1 A LYS 0.460 1
ATOM 121 C CA . LYS 139 139 ? A 1.494 -0.269 -4.542 1 1 A LYS 0.460 1
ATOM 122 C C . LYS 139 139 ? A 0.693 -0.964 -3.437 1 1 A LYS 0.460 1
ATOM 123 O O . LYS 139 139 ? A -0.394 -0.527 -3.067 1 1 A LYS 0.460 1
ATOM 124 C CB . LYS 139 139 ? A 1.238 -1.005 -5.885 1 1 A LYS 0.460 1
ATOM 125 C CG . LYS 139 139 ? A 1.747 -0.218 -7.105 1 1 A LYS 0.460 1
ATOM 126 C CD . LYS 139 139 ? A 1.710 -0.958 -8.459 1 1 A LYS 0.460 1
ATOM 127 C CE . LYS 139 139 ? A 0.314 -1.210 -9.044 1 1 A LYS 0.460 1
ATOM 128 N NZ . LYS 139 139 ? A -0.301 -2.431 -8.472 1 1 A LYS 0.460 1
ATOM 129 N N . GLN 140 140 ? A 1.227 -2.058 -2.861 1 1 A GLN 0.480 1
ATOM 130 C CA . GLN 140 140 ? A 0.630 -2.756 -1.735 1 1 A GLN 0.480 1
ATOM 131 C C . GLN 140 140 ? A 0.599 -1.900 -0.481 1 1 A GLN 0.480 1
ATOM 132 O O . GLN 140 140 ? A -0.397 -1.864 0.238 1 1 A GLN 0.480 1
ATOM 133 C CB . GLN 140 140 ? A 1.362 -4.085 -1.458 1 1 A GLN 0.480 1
ATOM 134 C CG . GLN 140 140 ? A 1.370 -5.010 -2.689 1 1 A GLN 0.480 1
ATOM 135 C CD . GLN 140 140 ? A 2.212 -6.257 -2.421 1 1 A GLN 0.480 1
ATOM 136 O OE1 . GLN 140 140 ? A 2.289 -6.780 -1.312 1 1 A GLN 0.480 1
ATOM 137 N NE2 . GLN 140 140 ? A 2.870 -6.756 -3.494 1 1 A GLN 0.480 1
ATOM 138 N N . MET 141 141 ? A 1.682 -1.140 -0.225 1 1 A MET 0.490 1
ATOM 139 C CA . MET 141 141 ? A 1.784 -0.179 0.862 1 1 A MET 0.490 1
ATOM 140 C C . MET 141 141 ? A 0.745 0.933 0.810 1 1 A MET 0.490 1
ATOM 141 O O . MET 141 141 ? A 0.182 1.312 1.836 1 1 A MET 0.490 1
ATOM 142 C CB . MET 141 141 ? A 3.173 0.497 0.897 1 1 A MET 0.490 1
ATOM 143 C CG . MET 141 141 ? A 4.340 -0.463 1.164 1 1 A MET 0.490 1
ATOM 144 S SD . MET 141 141 ? A 5.950 0.376 1.097 1 1 A MET 0.490 1
ATOM 145 C CE . MET 141 141 ? A 6.876 -1.176 1.231 1 1 A MET 0.490 1
ATOM 146 N N . ALA 142 142 ? A 0.455 1.477 -0.389 1 1 A ALA 0.500 1
ATOM 147 C CA . ALA 142 142 ? A -0.602 2.444 -0.628 1 1 A ALA 0.500 1
ATOM 148 C C . ALA 142 142 ? A -1.985 1.892 -0.274 1 1 A ALA 0.500 1
ATOM 149 O O . ALA 142 142 ? A -2.792 2.555 0.378 1 1 A ALA 0.500 1
ATOM 150 C CB . ALA 142 142 ? A -0.510 2.912 -2.095 1 1 A ALA 0.500 1
ATOM 151 N N . VAL 143 143 ? A -2.256 0.619 -0.628 1 1 A VAL 0.480 1
ATOM 152 C CA . VAL 143 143 ? A -3.453 -0.103 -0.214 1 1 A VAL 0.480 1
ATOM 153 C C . VAL 143 143 ? A -3.552 -0.274 1.299 1 1 A VAL 0.480 1
ATOM 154 O O . VAL 143 143 ? A -4.605 -0.036 1.888 1 1 A VAL 0.480 1
ATOM 155 C CB . VAL 143 143 ? A -3.561 -1.446 -0.935 1 1 A VAL 0.480 1
ATOM 156 C CG1 . VAL 143 143 ? A -4.711 -2.318 -0.389 1 1 A VAL 0.480 1
ATOM 157 C CG2 . VAL 143 143 ? A -3.781 -1.160 -2.433 1 1 A VAL 0.480 1
ATOM 158 N N . LYS 144 144 ? A -2.452 -0.642 2.001 1 1 A LYS 0.440 1
ATOM 159 C CA . LYS 144 144 ? A -2.460 -0.834 3.453 1 1 A LYS 0.440 1
ATOM 160 C C . LYS 144 144 ? A -2.825 0.429 4.210 1 1 A LYS 0.440 1
ATOM 161 O O . LYS 144 144 ? A -3.564 0.411 5.192 1 1 A LYS 0.440 1
ATOM 162 C CB . LYS 144 144 ? A -1.117 -1.345 4.050 1 1 A LYS 0.440 1
ATOM 163 C CG . LYS 144 144 ? A -0.436 -2.547 3.372 1 1 A LYS 0.440 1
ATOM 164 C CD . LYS 144 144 ? A -1.343 -3.708 2.923 1 1 A LYS 0.440 1
ATOM 165 C CE . LYS 144 144 ? A -2.038 -4.475 4.048 1 1 A LYS 0.440 1
ATOM 166 N NZ . LYS 144 144 ? A -2.887 -5.539 3.462 1 1 A LYS 0.440 1
ATOM 167 N N . LYS 145 145 ? A -2.326 1.571 3.720 1 1 A LYS 0.440 1
ATOM 168 C CA . LYS 145 145 ? A -2.656 2.889 4.201 1 1 A LYS 0.440 1
ATOM 169 C C . LYS 145 145 ? A -4.147 3.208 4.091 1 1 A LYS 0.440 1
ATOM 170 O O . LYS 145 145 ? A -4.736 3.733 5.031 1 1 A LYS 0.440 1
ATOM 171 C CB . LYS 145 145 ? A -1.753 3.892 3.449 1 1 A LYS 0.440 1
ATOM 172 C CG . LYS 145 145 ? A -0.281 3.759 3.891 1 1 A LYS 0.440 1
ATOM 173 C CD . LYS 145 145 ? A 0.722 4.429 2.938 1 1 A LYS 0.440 1
ATOM 174 C CE . LYS 145 145 ? A 2.171 4.275 3.407 1 1 A LYS 0.440 1
ATOM 175 N NZ . LYS 145 145 ? A 3.074 4.942 2.445 1 1 A LYS 0.440 1
ATOM 176 N N . TYR 146 146 ? A -4.824 2.839 2.984 1 1 A TYR 0.460 1
ATOM 177 C CA . TYR 146 146 ? A -6.270 2.974 2.855 1 1 A TYR 0.460 1
ATOM 178 C C . TYR 146 146 ? A -7.058 2.138 3.880 1 1 A TYR 0.460 1
ATOM 179 O O . TYR 146 146 ? A -8.010 2.632 4.486 1 1 A TYR 0.460 1
ATOM 180 C CB . TYR 146 146 ? A -6.708 2.691 1.390 1 1 A TYR 0.460 1
ATOM 181 C CG . TYR 146 146 ? A -8.207 2.678 1.224 1 1 A TYR 0.460 1
ATOM 182 C CD1 . TYR 146 146 ? A -8.962 3.863 1.236 1 1 A TYR 0.460 1
ATOM 183 C CD2 . TYR 146 146 ? A -8.873 1.445 1.139 1 1 A TYR 0.460 1
ATOM 184 C CE1 . TYR 146 146 ? A -10.358 3.812 1.106 1 1 A TYR 0.460 1
ATOM 185 C CE2 . TYR 146 146 ? A -10.267 1.393 1.015 1 1 A TYR 0.460 1
ATOM 186 C CZ . TYR 146 146 ? A -11.005 2.580 0.968 1 1 A TYR 0.460 1
ATOM 187 O OH . TYR 146 146 ? A -12.402 2.547 0.797 1 1 A TYR 0.460 1
ATOM 188 N N . LEU 147 147 ? A -6.663 0.869 4.138 1 1 A LEU 0.480 1
ATOM 189 C CA . LEU 147 147 ? A -7.296 0.034 5.158 1 1 A LEU 0.480 1
ATOM 190 C C . LEU 147 147 ? A -7.128 0.621 6.555 1 1 A LEU 0.480 1
ATOM 191 O O . LEU 147 147 ? A -8.071 0.702 7.344 1 1 A LEU 0.480 1
ATOM 192 C CB . LEU 147 147 ? A -6.777 -1.432 5.160 1 1 A LEU 0.480 1
ATOM 193 C CG . LEU 147 147 ? A -7.296 -2.372 4.042 1 1 A LEU 0.480 1
ATOM 194 C CD1 . LEU 147 147 ? A -8.819 -2.320 3.868 1 1 A LEU 0.480 1
ATOM 195 C CD2 . LEU 147 147 ? A -6.589 -2.194 2.695 1 1 A LEU 0.480 1
ATOM 196 N N . ASN 148 148 ? A -5.917 1.125 6.855 1 1 A ASN 0.540 1
ATOM 197 C CA . ASN 148 148 ? A -5.635 1.900 8.049 1 1 A ASN 0.540 1
ATOM 198 C C . ASN 148 148 ? A -6.500 3.166 8.145 1 1 A ASN 0.540 1
ATOM 199 O O . ASN 148 148 ? A -7.007 3.494 9.213 1 1 A ASN 0.540 1
ATOM 200 C CB . ASN 148 148 ? A -4.126 2.256 8.117 1 1 A ASN 0.540 1
ATOM 201 C CG . ASN 148 148 ? A -3.317 1.004 8.450 1 1 A ASN 0.540 1
ATOM 202 O OD1 . ASN 148 148 ? A -3.808 0.068 9.078 1 1 A ASN 0.540 1
ATOM 203 N ND2 . ASN 148 148 ? A -2.012 0.989 8.087 1 1 A ASN 0.540 1
ATOM 204 N N . SER 149 149 ? A -6.734 3.885 7.031 1 1 A SER 0.520 1
ATOM 205 C CA . SER 149 149 ? A -7.640 5.035 6.957 1 1 A SER 0.520 1
ATOM 206 C C . SER 149 149 ? A -9.088 4.781 7.325 1 1 A SER 0.520 1
ATOM 207 O O . SER 149 149 ? A -9.702 5.619 7.982 1 1 A SER 0.520 1
ATOM 208 C CB . SER 149 149 ? A -7.627 5.787 5.599 1 1 A SER 0.520 1
ATOM 209 O OG . SER 149 149 ? A -6.381 6.458 5.421 1 1 A SER 0.520 1
ATOM 210 N N . ILE 150 150 ? A -9.696 3.640 6.948 1 1 A ILE 0.650 1
ATOM 211 C CA . ILE 150 150 ? A -11.022 3.279 7.447 1 1 A ILE 0.650 1
ATOM 212 C C . ILE 150 150 ? A -11.011 2.940 8.925 1 1 A ILE 0.650 1
ATOM 213 O O . ILE 150 150 ? A -11.885 3.353 9.689 1 1 A ILE 0.650 1
ATOM 214 C CB . ILE 150 150 ? A -11.662 2.167 6.637 1 1 A ILE 0.650 1
ATOM 215 C CG1 . ILE 150 150 ? A -11.916 2.719 5.221 1 1 A ILE 0.650 1
ATOM 216 C CG2 . ILE 150 150 ? A -12.990 1.699 7.284 1 1 A ILE 0.650 1
ATOM 217 C CD1 . ILE 150 150 ? A -12.399 1.659 4.235 1 1 A ILE 0.650 1
ATOM 218 N N . LEU 151 151 ? A -9.974 2.212 9.384 1 1 A LEU 0.700 1
ATOM 219 C CA . LEU 151 151 ? A -9.750 1.917 10.788 1 1 A LEU 0.700 1
ATOM 220 C C . LEU 151 151 ? A -9.620 3.204 11.606 1 1 A LEU 0.700 1
ATOM 221 O O . LEU 151 151 ? A -10.212 3.324 12.672 1 1 A LEU 0.700 1
ATOM 222 C CB . LEU 151 151 ? A -8.495 1.020 10.951 1 1 A LEU 0.700 1
ATOM 223 C CG . LEU 151 151 ? A -8.712 -0.515 10.903 1 1 A LEU 0.700 1
ATOM 224 C CD1 . LEU 151 151 ? A -9.744 -0.989 9.867 1 1 A LEU 0.700 1
ATOM 225 C CD2 . LEU 151 151 ? A -7.371 -1.234 10.662 1 1 A LEU 0.700 1
ATOM 226 N N . ASN 152 152 ? A -8.926 4.237 11.080 1 1 A ASN 0.650 1
ATOM 227 C CA . ASN 152 152 ? A -8.850 5.579 11.650 1 1 A ASN 0.650 1
ATOM 228 C C . ASN 152 152 ? A -10.208 6.209 11.950 1 1 A ASN 0.650 1
ATOM 229 O O . ASN 152 152 ? A -10.361 6.857 12.982 1 1 A ASN 0.650 1
ATOM 230 C CB . ASN 152 152 ? A -7.999 6.561 10.788 1 1 A ASN 0.650 1
ATOM 231 C CG . ASN 152 152 ? A -6.517 6.201 10.858 1 1 A ASN 0.650 1
ATOM 232 O OD1 . ASN 152 152 ? A -6.023 5.713 11.875 1 1 A ASN 0.650 1
ATOM 233 N ND2 . ASN 152 152 ? A -5.764 6.492 9.769 1 1 A ASN 0.650 1
ATOM 234 N N . GLY 153 153 ? A -11.245 6.001 11.109 1 1 A GLY 0.610 1
ATOM 235 C CA . GLY 153 153 ? A -12.591 6.482 11.419 1 1 A GLY 0.610 1
ATOM 236 C C . GLY 153 153 ? A -13.247 5.786 12.589 1 1 A GLY 0.610 1
ATOM 237 O O . GLY 153 153 ? A -14.015 6.383 13.336 1 1 A GLY 0.610 1
ATOM 238 N N . LYS 154 154 ? A -12.943 4.492 12.794 1 1 A LYS 0.620 1
ATOM 239 C CA . LYS 154 154 ? A -13.477 3.720 13.901 1 1 A LYS 0.620 1
ATOM 240 C C . LYS 154 154 ? A -12.707 3.908 15.198 1 1 A LYS 0.620 1
ATOM 241 O O . LYS 154 154 ? A -13.282 3.822 16.276 1 1 A LYS 0.620 1
ATOM 242 C CB . LYS 154 154 ? A -13.521 2.227 13.529 1 1 A LYS 0.620 1
ATOM 243 C CG . LYS 154 154 ? A -14.545 1.959 12.416 1 1 A LYS 0.620 1
ATOM 244 C CD . LYS 154 154 ? A -14.618 0.477 12.034 1 1 A LYS 0.620 1
ATOM 245 C CE . LYS 154 154 ? A -15.658 0.197 10.950 1 1 A LYS 0.620 1
ATOM 246 N NZ . LYS 154 154 ? A -15.646 -1.243 10.614 1 1 A LYS 0.620 1
ATOM 247 N N . ARG 155 155 ? A -11.406 4.251 15.120 1 1 A ARG 0.580 1
ATOM 248 C CA . ARG 155 155 ? A -10.554 4.542 16.270 1 1 A ARG 0.580 1
ATOM 249 C C . ARG 155 155 ? A -11.014 5.731 17.102 1 1 A ARG 0.580 1
ATOM 250 O O . ARG 155 155 ? A -10.731 5.819 18.288 1 1 A ARG 0.580 1
ATOM 251 C CB . ARG 155 155 ? A -9.102 4.880 15.841 1 1 A ARG 0.580 1
ATOM 252 C CG . ARG 155 155 ? A -8.244 3.687 15.392 1 1 A ARG 0.580 1
ATOM 253 C CD . ARG 155 155 ? A -6.878 4.118 14.859 1 1 A ARG 0.580 1
ATOM 254 N NE . ARG 155 155 ? A -6.202 2.889 14.321 1 1 A ARG 0.580 1
ATOM 255 C CZ . ARG 155 155 ? A -5.017 2.922 13.695 1 1 A ARG 0.580 1
ATOM 256 N NH1 . ARG 155 155 ? A -4.421 4.072 13.418 1 1 A ARG 0.580 1
ATOM 257 N NH2 . ARG 155 155 ? A -4.436 1.805 13.270 1 1 A ARG 0.580 1
ATOM 258 N N . SER 156 156 ? A -11.679 6.715 16.474 1 1 A SER 0.630 1
ATOM 259 C CA . SER 156 156 ? A -12.368 7.807 17.154 1 1 A SER 0.630 1
ATOM 260 C C . SER 156 156 ? A -13.588 7.407 17.967 1 1 A SER 0.630 1
ATOM 261 O O . SER 156 156 ? A -13.940 8.055 18.946 1 1 A SER 0.630 1
ATOM 262 C CB . SER 156 156 ? A -12.931 8.838 16.153 1 1 A SER 0.630 1
ATOM 263 O OG . SER 156 156 ? A -11.900 9.465 15.395 1 1 A SER 0.630 1
ATOM 264 N N . SER 157 157 ? A -14.329 6.395 17.481 1 1 A SER 0.530 1
ATOM 265 C CA . SER 157 157 ? A -15.502 5.811 18.115 1 1 A SER 0.530 1
ATOM 266 C C . SER 157 157 ? A -15.222 4.839 19.249 1 1 A SER 0.530 1
ATOM 267 O O . SER 157 157 ? A -16.056 4.689 20.139 1 1 A SER 0.530 1
ATOM 268 C CB . SER 157 157 ? A -16.333 4.990 17.103 1 1 A SER 0.530 1
ATOM 269 O OG . SER 157 157 ? A -16.847 5.825 16.065 1 1 A SER 0.530 1
ATOM 270 N N . GLU 158 158 ? A -14.090 4.115 19.173 1 1 A GLU 0.480 1
ATOM 271 C CA . GLU 158 158 ? A -13.597 3.178 20.174 1 1 A GLU 0.480 1
ATOM 272 C C . GLU 158 158 ? A -12.882 3.863 21.383 1 1 A GLU 0.480 1
ATOM 273 O O . GLU 158 158 ? A -12.711 5.111 21.382 1 1 A GLU 0.480 1
ATOM 274 C CB . GLU 158 158 ? A -12.605 2.176 19.501 1 1 A GLU 0.480 1
ATOM 275 C CG . GLU 158 158 ? A -13.281 1.130 18.567 1 1 A GLU 0.480 1
ATOM 276 C CD . GLU 158 158 ? A -12.352 0.221 17.747 1 1 A GLU 0.480 1
ATOM 277 O OE1 . GLU 158 158 ? A -11.105 0.375 17.781 1 1 A GLU 0.480 1
ATOM 278 O OE2 . GLU 158 158 ? A -12.925 -0.648 17.028 1 1 A GLU 0.480 1
ATOM 279 O OXT . GLU 158 158 ? A -12.510 3.124 22.341 1 1 A GLU 0.480 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.519
2 1 3 0.067
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 125 HIS 1 0.320
2 1 A 126 SER 1 0.400
3 1 A 127 ASP 1 0.250
4 1 A 128 ALA 1 0.390
5 1 A 129 VAL 1 0.540
6 1 A 130 PHE 1 0.490
7 1 A 131 THR 1 0.490
8 1 A 132 ASP 1 0.590
9 1 A 133 ASN 1 0.610
10 1 A 134 TYR 1 0.630
11 1 A 135 THR 1 0.600
12 1 A 136 ARG 1 0.530
13 1 A 137 LEU 1 0.570
14 1 A 138 ARG 1 0.480
15 1 A 139 LYS 1 0.460
16 1 A 140 GLN 1 0.480
17 1 A 141 MET 1 0.490
18 1 A 142 ALA 1 0.500
19 1 A 143 VAL 1 0.480
20 1 A 144 LYS 1 0.440
21 1 A 145 LYS 1 0.440
22 1 A 146 TYR 1 0.460
23 1 A 147 LEU 1 0.480
24 1 A 148 ASN 1 0.540
25 1 A 149 SER 1 0.520
26 1 A 150 ILE 1 0.650
27 1 A 151 LEU 1 0.700
28 1 A 152 ASN 1 0.650
29 1 A 153 GLY 1 0.610
30 1 A 154 LYS 1 0.620
31 1 A 155 ARG 1 0.580
32 1 A 156 SER 1 0.630
33 1 A 157 SER 1 0.530
34 1 A 158 GLU 1 0.480
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
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