data_SMR-18e03a7d1363cc9446af13c748e9bb51_2
_entry.id SMR-18e03a7d1363cc9446af13c748e9bb51_2
_struct.entry_id SMR-18e03a7d1363cc9446af13c748e9bb51_2
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - A0A6D2WGC0/ A0A6D2WGC0_PANTR, VIP isoform 2
  - H2QTX6/ H2QTX6_PANTR, Vasoactive intestinal peptide
  - P01282/ VIP_HUMAN, VIP peptides

Estimated model accuracy of this model is 0.068, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries A0A6D2WGC0, H2QTX6, P01282'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
UNK 'L-peptide linking' UNKNOWN . . 'CCD local'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 22133.349 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP H2QTX6_PANTR H2QTX6 1
;MDTRNKAQLLVLLTLLSVLFSQTSAWPLYRAPSALRLGDRIPFEGANEPDQVSLKEDIDMLQNALAENDT
PYYDVSRNARHADGVFTSDFSKLLGQLSAKKYLESLMGKRVSNISEDPVPVKRHSDAVFTDNYTRLRKQM
AVKKYLNSILNGKRSSEGESPDFPEELEK
;
'Vasoactive intestinal peptide'
2 1 UNP A0A6D2WGC0_PANTR A0A6D2WGC0 1
;MDTRNKAQLLVLLTLLSVLFSQTSAWPLYRAPSALRLGDRIPFEGANEPDQVSLKEDIDMLQNALAENDT
PYYDVSRNARHADGVFTSDFSKLLGQLSAKKYLESLMGKRVSNISEDPVPVKRHSDAVFTDNYTRLRKQM
AVKKYLNSILNGKRSSEGESPDFPEELEK
;
'VIP isoform 2'
3 1 UNP VIP_HUMAN P01282 1
;MDTRNKAQLLVLLTLLSVLFSQTSAWPLYRAPSALRLGDRIPFEGANEPDQVSLKEDIDMLQNALAENDT
PYYDVSRNARHADGVFTSDFSKLLGQLSAKKYLESLMGKRVSNISEDPVPVKRHSDAVFTDNYTRLRKQM
AVKKYLNSILNGKRSSEGESPDFPEELEK
;
'VIP peptides'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 169 1 169
2 2 1 169 1 169
3 3 1 169 1 169
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . H2QTX6_PANTR H2QTX6 . 1 169 9598 'Pan troglodytes (Chimpanzee)'
2018-02-28 F325BDFEF47132C3
1 UNP . A0A6D2WGC0_PANTR A0A6D2WGC0 . 1 169 9598 'Pan troglodytes (Chimpanzee)'
2020-06-17 F325BDFEF47132C3
1 UNP . VIP_HUMAN P01282 P01282-2 1 169 9606 'Homo sapiens (Human)' 1986-07-21
F325BDFEF47132C3
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A
;MDTRNKAQLLVLLTLLSVLFSQTSAWPLYRAPSALRLGDRIPFEGANEPDQVSLKEDIDMLQNALAENDT
PYYDVSRNARHADGVFTSDFSKLLGQLSAKKYLESLMGKRVSNISEDPVPVKRHSDAVFTDNYTRLRKQM
AVKKYLNSILNGKRSSEGESPDFPEELEK
;

;MDTRNKAQLLVLLTLLSVLFSQTSAWPLYRAPSALRLGDRIPFEGANEPDQVSLKEDIDMLQNALAENDT
PYYDVSRNARHADGVFTSDFSKLLGQLSAKKYLESLMGKRVSNISEDPVPVKRHSDAVFTDNYTRLRKQM
AVKKYLNSILNGKRSSEGESPDFPEELEK
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 ASP .
1 3 THR .
1 4 ARG .
1 5 ASN .
1 6 LYS .
1 7 ALA .
1 8 GLN .
1 9 LEU .
1 10 LEU .
1 11 VAL .
1 12 LEU .
1 13 LEU .
1 14 THR .
1 15 LEU .
1 16 LEU .
1 17 SER .
1 18 VAL .
1 19 LEU .
1 20 PHE .
1 21 SER .
1 22 GLN .
1 23 THR .
1 24 SER .
1 25 ALA .
1 26 TRP .
1 27 PRO .
1 28 LEU .
1 29 TYR .
1 30 ARG .
1 31 ALA .
1 32 PRO .
1 33 SER .
1 34 ALA .
1 35 LEU .
1 36 ARG .
1 37 LEU .
1 38 GLY .
1 39 ASP .
1 40 ARG .
1 41 ILE .
1 42 PRO .
1 43 PHE .
1 44 GLU .
1 45 GLY .
1 46 ALA .
1 47 ASN .
1 48 GLU .
1 49 PRO .
1 50 ASP .
1 51 GLN .
1 52 VAL .
1 53 SER .
1 54 LEU .
1 55 LYS .
1 56 GLU .
1 57 ASP .
1 58 ILE .
1 59 ASP .
1 60 MET .
1 61 LEU .
1 62 GLN .
1 63 ASN .
1 64 ALA .
1 65 LEU .
1 66 ALA .
1 67 GLU .
1 68 ASN .
1 69 ASP .
1 70 THR .
1 71 PRO .
1 72 TYR .
1 73 TYR .
1 74 ASP .
1 75 VAL .
1 76 SER .
1 77 ARG .
1 78 ASN .
1 79 ALA .
1 80 ARG .
1 81 HIS .
1 82 ALA .
1 83 ASP .
1 84 GLY .
1 85 VAL .
1 86 PHE .
1 87 THR .
1 88 SER .
1 89 ASP .
1 90 PHE .
1 91 SER .
1 92 LYS .
1 93 LEU .
1 94 LEU .
1 95 GLY .
1 96 GLN .
1 97 LEU .
1 98 SER .
1 99 ALA .
1 100 LYS .
1 101 LYS .
1 102 TYR .
1 103 LEU .
1 104 GLU .
1 105 SER .
1 106 LEU .
1 107 MET .
1 108 GLY .
1 109 LYS .
1 110 ARG .
1 111 VAL .
1 112 SER .
1 113 ASN .
1 114 ILE .
1 115 SER .
1 116 GLU .
1 117 ASP .
1 118 PRO .
1 119 VAL .
1 120 PRO .
1 121 VAL .
1 122 LYS .
1 123 ARG .
1 124 HIS .
1 125 SER .
1 126 ASP .
1 127 ALA .
1 128 VAL .
1 129 PHE .
1 130 THR .
1 131 ASP .
1 132 ASN .
1 133 TYR .
1 134 THR .
1 135 ARG .
1 136 LEU .
1 137 ARG .
1 138 LYS .
1 139 GLN .
1 140 MET .
1 141 ALA .
1 142 VAL .
1 143 LYS .
1 144 LYS .
1 145 TYR .
1 146 LEU .
1 147 ASN .
1 148 SER .
1 149 ILE .
1 150 LEU .
1 151 ASN .
1 152 GLY .
1 153 LYS .
1 154 ARG .
1 155 SER .
1 156 SER .
1 157 GLU .
1 158 GLY .
1 159 GLU .
1 160 SER .
1 161 PRO .
1 162 ASP .
1 163 PHE .
1 164 PRO .
1 165 GLU .
1 166 GLU .
1 167 LEU .
1 168 GLU .
1 169 LYS .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? A .
A 1 2 ASP 2 ? ? ? A .
A 1 3 THR 3 ? ? ? A .
A 1 4 ARG 4 ? ? ? A .
A 1 5 ASN 5 ? ? ? A .
A 1 6 LYS 6 ? ? ? A .
A 1 7 ALA 7 ? ? ? A .
A 1 8 GLN 8 ? ? ? A .
A 1 9 LEU 9 ? ? ? A .
A 1 10 LEU 10 ? ? ? A .
A 1 11 VAL 11 ? ? ? A .
A 1 12 LEU 12 ? ? ? A .
A 1 13 LEU 13 ? ? ? A .
A 1 14 THR 14 ? ? ? A .
A 1 15 LEU 15 ? ? ? A .
A 1 16 LEU 16 ? ? ? A .
A 1 17 SER 17 ? ? ? A .
A 1 18 VAL 18 ? ? ? A .
A 1 19 LEU 19 ? ? ? A .
A 1 20 PHE 20 ? ? ? A .
A 1 21 SER 21 ? ? ? A .
A 1 22 GLN 22 ? ? ? A .
A 1 23 THR 23 ? ? ? A .
A 1 24 SER 24 ? ? ? A .
A 1 25 ALA 25 ? ? ? A .
A 1 26 TRP 26 ? ? ? A .
A 1 27 PRO 27 ? ? ? A .
A 1 28 LEU 28 ? ? ? A .
A 1 29 TYR 29 ? ? ? A .
A 1 30 ARG 30 ? ? ? A .
A 1 31 ALA 31 ? ? ? A .
A 1 32 PRO 32 ? ? ? A .
A 1 33 SER 33 ? ? ? A .
A 1 34 ALA 34 ? ? ? A .
A 1 35 LEU 35 ? ? ? A .
A 1 36 ARG 36 ? ? ? A .
A 1 37 LEU 37 ? ? ? A .
A 1 38 GLY 38 ? ? ? A .
A 1 39 ASP 39 ? ? ? A .
A 1 40 ARG 40 ? ? ? A .
A 1 41 ILE 41 ? ? ? A .
A 1 42 PRO 42 ? ? ? A .
A 1 43 PHE 43 ? ? ? A .
A 1 44 GLU 44 ? ? ? A .
A 1 45 GLY 45 ? ? ? A .
A 1 46 ALA 46 ? ? ? A .
A 1 47 ASN 47 ? ? ? A .
A 1 48 GLU 48 ? ? ? A .
A 1 49 PRO 49 ? ? ? A .
A 1 50 ASP 50 ? ? ? A .
A 1 51 GLN 51 ? ? ? A .
A 1 52 VAL 52 ? ? ? A .
A 1 53 SER 53 ? ? ? A .
A 1 54 LEU 54 ? ? ? A .
A 1 55 LYS 55 ? ? ? A .
A 1 56 GLU 56 ? ? ? A .
A 1 57 ASP 57 ? ? ? A .
A 1 58 ILE 58 ? ? ? A .
A 1 59 ASP 59 ? ? ? A .
A 1 60 MET 60 ? ? ? A .
A 1 61 LEU 61 ? ? ? A .
A 1 62 GLN 62 ? ? ? A .
A 1 63 ASN 63 ? ? ? A .
A 1 64 ALA 64 ? ? ? A .
A 1 65 LEU 65 ? ? ? A .
A 1 66 ALA 66 ? ? ? A .
A 1 67 GLU 67 ? ? ? A .
A 1 68 ASN 68 ? ? ? A .
A 1 69 ASP 69 ? ? ? A .
A 1 70 THR 70 ? ? ? A .
A 1 71 PRO 71 ? ? ? A .
A 1 72 TYR 72 ? ? ? A .
A 1 73 TYR 73 ? ? ? A .
A 1 74 ASP 74 ? ? ? A .
A 1 75 VAL 75 ? ? ? A .
A 1 76 SER 76 ? ? ? A .
A 1 77 ARG 77 ? ? ? A .
A 1 78 ASN 78 ? ? ? A .
A 1 79 ALA 79 ? ? ? A .
A 1 80 ARG 80 ? ? ? A .
A 1 81 HIS 81 ? ? ? A .
A 1 82 ALA 82 ? ? ? A .
A 1 83 ASP 83 ? ? ? A .
A 1 84 GLY 84 ? ? ? A .
A 1 85 VAL 85 ? ? ? A .
A 1 86 PHE 86 ? ? ? A .
A 1 87 THR 87 ? ? ? A .
A 1 88 SER 88 ? ? ? A .
A 1 89 ASP 89 ? ? ? A .
A 1 90 PHE 90 ? ? ? A .
A 1 91 SER 91 ? ? ? A .
A 1 92 LYS 92 ? ? ? A .
A 1 93 LEU 93 ? ? ? A .
A 1 94 LEU 94 ? ? ? A .
A 1 95 GLY 95 ? ? ? A .
A 1 96 GLN 96 ? ? ? A .
A 1 97 LEU 97 ? ? ? A .
A 1 98 SER 98 ? ? ? A .
A 1 99 ALA 99 ? ? ? A .
A 1 100 LYS 100 ? ? ? A .
A 1 101 LYS 101 ? ? ? A .
A 1 102 TYR 102 ? ? ? A .
A 1 103 LEU 103 ? ? ? A .
A 1 104 GLU 104 ? ? ? A .
A 1 105 SER 105 ? ? ? A .
A 1 106 LEU 106 ? ? ? A .
A 1 107 MET 107 ? ? ? A .
A 1 108 GLY 108 ? ? ? A .
A 1 109 LYS 109 ? ? ? A .
A 1 110 ARG 110 ? ? ? A .
A 1 111 VAL 111 ? ? ? A .
A 1 112 SER 112 ? ? ? A .
A 1 113 ASN 113 ? ? ? A .
A 1 114 ILE 114 ? ? ? A .
A 1 115 SER 115 ? ? ? A .
A 1 116 GLU 116 ? ? ? A .
A 1 117 ASP 117 ? ? ? A .
A 1 118 PRO 118 ? ? ? A .
A 1 119 VAL 119 ? ? ? A .
A 1 120 PRO 120 ? ? ? A .
A 1 121 VAL 121 ? ? ? A .
A 1 122 LYS 122 ? ? ? A .
A 1 123 ARG 123 ? ? ? A .
A 1 124 HIS 124 124 HIS HIS A .
A 1 125 SER 125 125 SER SER A .
A 1 126 ASP 126 126 ASP ASP A .
A 1 127 ALA 127 127 ALA ALA A .
A 1 128 VAL 128 128 VAL VAL A .
A 1 129 PHE 129 129 PHE PHE A .
A 1 130 THR 130 130 THR THR A .
A 1 131 ASP 131 131 ASP ASP A .
A 1 132 ASN 132 132 ASN ASN A .
A 1 133 TYR 133 133 TYR TYR A .
A 1 134 THR 134 134 THR THR A .
A 1 135 ARG 135 135 ARG ARG A .
A 1 136 LEU 136 136 LEU LEU A .
A 1 137 ARG 137 137 ARG ARG A .
A 1 138 LYS 138 138 LYS LYS A .
A 1 139 GLN 139 139 GLN GLN A .
A 1 140 MET 140 140 MET MET A .
A 1 141 ALA 141 141 ALA ALA A .
A 1 142 VAL 142 142 VAL VAL A .
A 1 143 LYS 143 143 LYS LYS A .
A 1 144 LYS 144 144 LYS LYS A .
A 1 145 TYR 145 145 TYR TYR A .
A 1 146 LEU 146 146 LEU LEU A .
A 1 147 ASN 147 147 ASN ASN A .
A 1 148 SER 148 148 SER SER A .
A 1 149 ILE 149 149 ILE ILE A .
A 1 150 LEU 150 150 LEU LEU A .
A 1 151 ASN 151 151 ASN ASN A .
A 1 152 GLY 152 152 GLY GLY A .
A 1 153 LYS 153 153 LYS LYS A .
A 1 154 ARG 154 154 ARG ARG A .
A 1 155 SER 155 155 SER SER A .
A 1 156 SER 156 156 SER SER A .
A 1 157 GLU 157 157 GLU GLU A .
A 1 158 GLY 158 ? ? ? A .
A 1 159 GLU 159 ? ? ? A .
A 1 160 SER 160 ? ? ? A .
A 1 161 PRO 161 ? ? ? A .
A 1 162 ASP 162 ? ? ? A .
A 1 163 PHE 163 ? ? ? A .
A 1 164 PRO 164 ? ? ? A .
A 1 165 GLU 165 ? ? ? A .
A 1 166 GLU 166 ? ? ? A .
A 1 167 LEU 167 ? ? ? A .
A 1 168 GLU 168 ? ? ? A .
A 1 169 LYS 169 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'Pituitary adenylate cyclase activating polypeptide-38 {PDB ID=2d2p, label_asym_id=A, auth_asym_id=A, SMTL ID=2d2p.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 2d2p, label_asym_id=A'
'target-template alignment' .
4 'model 2' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-14
6 PDB https://www.wwpdb.org . 2024-11-08
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 HSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNK(UNK)
HSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNKX
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 1 34
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 2d2p 2024-10-30
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 169
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 169 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 2.4e-12 55.882
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MDTRNKAQLLVLLTLLSVLFSQTSAWPLYRAPSALRLGDRIPFEGANEPDQVSLKEDIDMLQNALAENDTPYYDVSRNARHADGVFTSDFSKLLGQLSAKKYLESLMGKRVSNISEDPVPVKRHSDAVFTDNYTRLRKQMAVKKYLNSILNGKRSSEGESPDFPEELEK
2 1 2
---------------------------------------------------------------------------------------------------------------------------HSDGIFTDSYSRYRKQMAVKKYLAAVLGKRYKQR------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 2d2p.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 2' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . HIS 124 124 ? A 11.805 -9.193 -18.938 1 1 A HIS 0.390 1
ATOM 2 C CA . HIS 124 124 ? A 13.202 -9.223 -18.377 1 1 A HIS 0.390 1
ATOM 3 C C . HIS 124 124 ? A 13.776 -7.805 -18.416 1 1 A HIS 0.390 1
ATOM 4 O O . HIS 124 124 ? A 13.325 -7.040 -19.258 1 1 A HIS 0.390 1
ATOM 5 C CB . HIS 124 124 ? A 14.068 -10.182 -19.225 1 1 A HIS 0.390 1
ATOM 6 C CG . HIS 124 124 ? A 15.435 -10.348 -18.660 1 1 A HIS 0.390 1
ATOM 7 N ND1 . HIS 124 124 ? A 16.407 -9.544 -19.191 1 1 A HIS 0.390 1
ATOM 8 C CD2 . HIS 124 124 ? A 15.923 -11.060 -17.611 1 1 A HIS 0.390 1
ATOM 9 C CE1 . HIS 124 124 ? A 17.484 -9.772 -18.472 1 1 A HIS 0.390 1
ATOM 10 N NE2 . HIS 124 124 ? A 17.245 -10.684 -17.498 1 1 A HIS 0.390 1
ATOM 11 N N . SER 125 125 ? A 14.720 -7.433 -17.527 1 1 A SER 0.430 1
ATOM 12 C CA . SER 125 125 ? A 15.324 -6.105 -17.467 1 1 A SER 0.430 1
ATOM 13 C C . SER 125 125 ? A 16.609 -6.301 -16.679 1 1 A SER 0.430 1
ATOM 14 O O . SER 125 125 ? A 16.720 -7.279 -15.941 1 1 A SER 0.430 1
ATOM 15 C CB . SER 125 125 ? A 14.496 -5.014 -16.703 1 1 A SER 0.430 1
ATOM 16 O OG . SER 125 125 ? A 13.274 -4.684 -17.361 1 1 A SER 0.430 1
ATOM 17 N N . ASP 126 126 ? A 17.581 -5.371 -16.768 1 1 A ASP 0.250 1
ATOM 18 C CA . ASP 126 126 ? A 18.903 -5.399 -16.139 1 1 A ASP 0.250 1
ATOM 19 C C . ASP 126 126 ? A 18.946 -5.578 -14.632 1 1 A ASP 0.250 1
ATOM 20 O O . ASP 126 126 ? A 19.885 -6.126 -14.054 1 1 A ASP 0.250 1
ATOM 21 C CB . ASP 126 126 ? A 19.596 -4.061 -16.459 1 1 A ASP 0.250 1
ATOM 22 C CG . ASP 126 126 ? A 19.781 -4.037 -17.960 1 1 A ASP 0.250 1
ATOM 23 O OD1 . ASP 126 126 ? A 20.829 -4.534 -18.435 1 1 A ASP 0.250 1
ATOM 24 O OD2 . ASP 126 126 ? A 18.809 -3.600 -18.632 1 1 A ASP 0.250 1
ATOM 25 N N . ALA 127 127 ? A 17.904 -5.092 -13.955 1 1 A ALA 0.420 1
ATOM 26 C CA . ALA 127 127 ? A 17.821 -5.105 -12.525 1 1 A ALA 0.420 1
ATOM 27 C C . ALA 127 127 ? A 16.349 -4.999 -12.174 1 1 A ALA 0.420 1
ATOM 28 O O . ALA 127 127 ? A 15.855 -3.959 -11.757 1 1 A ALA 0.420 1
ATOM 29 C CB . ALA 127 127 ? A 18.662 -3.974 -11.893 1 1 A ALA 0.420 1
ATOM 30 N N . VAL 128 128 ? A 15.584 -6.100 -12.359 1 1 A VAL 0.490 1
ATOM 31 C CA . VAL 128 128 ? A 14.133 -6.199 -12.158 1 1 A VAL 0.490 1
ATOM 32 C C . VAL 128 128 ? A 13.661 -5.723 -10.781 1 1 A VAL 0.490 1
ATOM 33 O O . VAL 128 128 ? A 12.569 -5.181 -10.611 1 1 A VAL 0.490 1
ATOM 34 C CB . VAL 128 128 ? A 13.694 -7.636 -12.442 1 1 A VAL 0.490 1
ATOM 35 C CG1 . VAL 128 128 ? A 12.210 -7.892 -12.126 1 1 A VAL 0.490 1
ATOM 36 C CG2 . VAL 128 128 ? A 13.949 -7.939 -13.931 1 1 A VAL 0.490 1
ATOM 37 N N . PHE 129 129 ? A 14.540 -5.840 -9.768 1 1 A PHE 0.510 1
ATOM 38 C CA . PHE 129 129 ? A 14.431 -5.298 -8.421 1 1 A PHE 0.510 1
ATOM 39 C C . PHE 129 129 ? A 14.028 -3.818 -8.351 1 1 A PHE 0.510 1
ATOM 40 O O . PHE 129 129 ? A 13.283 -3.415 -7.458 1 1 A PHE 0.510 1
ATOM 41 C CB . PHE 129 129 ? A 15.771 -5.534 -7.680 1 1 A PHE 0.510 1
ATOM 42 C CG . PHE 129 129 ? A 16.149 -6.992 -7.746 1 1 A PHE 0.510 1
ATOM 43 C CD1 . PHE 129 129 ? A 15.428 -7.949 -7.012 1 1 A PHE 0.510 1
ATOM 44 C CD2 . PHE 129 129 ? A 17.213 -7.419 -8.559 1 1 A PHE 0.510 1
ATOM 45 C CE1 . PHE 129 129 ? A 15.772 -9.305 -7.075 1 1 A PHE 0.510 1
ATOM 46 C CE2 . PHE 129 129 ? A 17.559 -8.775 -8.626 1 1 A PHE 0.510 1
ATOM 47 C CZ . PHE 129 129 ? A 16.842 -9.717 -7.879 1 1 A PHE 0.510 1
ATOM 48 N N . THR 130 130 ? A 14.449 -3.006 -9.346 1 1 A THR 0.540 1
ATOM 49 C CA . THR 130 130 ? A 14.075 -1.603 -9.567 1 1 A THR 0.540 1
ATOM 50 C C . THR 130 130 ? A 12.566 -1.383 -9.725 1 1 A THR 0.540 1
ATOM 51 O O . THR 130 130 ? A 12.043 -0.351 -9.307 1 1 A THR 0.540 1
ATOM 52 C CB . THR 130 130 ? A 14.836 -0.998 -10.757 1 1 A THR 0.540 1
ATOM 53 O OG1 . THR 130 130 ? A 16.230 -1.244 -10.619 1 1 A THR 0.540 1
ATOM 54 C CG2 . THR 130 130 ? A 14.718 0.530 -10.858 1 1 A THR 0.540 1
ATOM 55 N N . ASP 131 131 ? A 11.815 -2.361 -10.297 1 1 A ASP 0.560 1
ATOM 56 C CA . ASP 131 131 ? A 10.366 -2.290 -10.453 1 1 A ASP 0.560 1
ATOM 57 C C . ASP 131 131 ? A 9.629 -3.154 -9.415 1 1 A ASP 0.560 1
ATOM 58 O O . ASP 131 131 ? A 8.537 -2.808 -8.968 1 1 A ASP 0.560 1
ATOM 59 C CB . ASP 131 131 ? A 9.980 -2.702 -11.896 1 1 A ASP 0.560 1
ATOM 60 C CG . ASP 131 131 ? A 8.503 -2.470 -12.152 1 1 A ASP 0.560 1
ATOM 61 O OD1 . ASP 131 131 ? A 8.018 -1.321 -12.019 1 1 A ASP 0.560 1
ATOM 62 O OD2 . ASP 131 131 ? A 7.813 -3.478 -12.454 1 1 A ASP 0.560 1
ATOM 63 N N . ASN 132 132 ? A 10.227 -4.261 -8.909 1 1 A ASN 0.600 1
ATOM 64 C CA . ASN 132 132 ? A 9.646 -5.064 -7.826 1 1 A ASN 0.600 1
ATOM 65 C C . ASN 132 132 ? A 9.431 -4.251 -6.550 1 1 A ASN 0.600 1
ATOM 66 O O . ASN 132 132 ? A 8.461 -4.439 -5.816 1 1 A ASN 0.600 1
ATOM 67 C CB . ASN 132 132 ? A 10.482 -6.332 -7.500 1 1 A ASN 0.600 1
ATOM 68 C CG . ASN 132 132 ? A 10.323 -7.363 -8.614 1 1 A ASN 0.600 1
ATOM 69 O OD1 . ASN 132 132 ? A 9.384 -7.329 -9.405 1 1 A ASN 0.600 1
ATOM 70 N ND2 . ASN 132 132 ? A 11.247 -8.352 -8.664 1 1 A ASN 0.600 1
ATOM 71 N N . TYR 133 133 ? A 10.319 -3.273 -6.301 1 1 A TYR 0.630 1
ATOM 72 C CA . TYR 133 133 ? A 10.175 -2.261 -5.272 1 1 A TYR 0.630 1
ATOM 73 C C . TYR 133 133 ? A 8.888 -1.424 -5.423 1 1 A TYR 0.630 1
ATOM 74 O O . TYR 133 133 ? A 8.145 -1.212 -4.463 1 1 A TYR 0.630 1
ATOM 75 C CB . TYR 133 133 ? A 11.443 -1.375 -5.368 1 1 A TYR 0.630 1
ATOM 76 C CG . TYR 133 133 ? A 11.661 -0.381 -4.260 1 1 A TYR 0.630 1
ATOM 77 C CD1 . TYR 133 133 ? A 11.102 -0.496 -2.973 1 1 A TYR 0.630 1
ATOM 78 C CD2 . TYR 133 133 ? A 12.527 0.688 -4.530 1 1 A TYR 0.630 1
ATOM 79 C CE1 . TYR 133 133 ? A 11.388 0.462 -1.988 1 1 A TYR 0.630 1
ATOM 80 C CE2 . TYR 133 133 ? A 12.814 1.645 -3.551 1 1 A TYR 0.630 1
ATOM 81 C CZ . TYR 133 133 ? A 12.241 1.533 -2.285 1 1 A TYR 0.630 1
ATOM 82 O OH . TYR 133 133 ? A 12.533 2.495 -1.309 1 1 A TYR 0.630 1
ATOM 83 N N . THR 134 134 ? A 8.565 -0.986 -6.660 1 1 A THR 0.580 1
ATOM 84 C CA . THR 134 134 ? A 7.313 -0.318 -7.051 1 1 A THR 0.580 1
ATOM 85 C C . THR 134 134 ? A 6.102 -1.210 -6.864 1 1 A THR 0.580 1
ATOM 86 O O . THR 134 134 ? A 5.055 -0.778 -6.380 1 1 A THR 0.580 1
ATOM 87 C CB . THR 134 134 ? A 7.326 0.197 -8.495 1 1 A THR 0.580 1
ATOM 88 O OG1 . THR 134 134 ? A 8.352 1.163 -8.641 1 1 A THR 0.580 1
ATOM 89 C CG2 . THR 134 134 ? A 6.019 0.902 -8.904 1 1 A THR 0.580 1
ATOM 90 N N . ARG 135 135 ? A 6.209 -2.513 -7.199 1 1 A ARG 0.590 1
ATOM 91 C CA . ARG 135 135 ? A 5.139 -3.476 -6.983 1 1 A ARG 0.590 1
ATOM 92 C C . ARG 135 135 ? A 4.726 -3.621 -5.519 1 1 A ARG 0.590 1
ATOM 93 O O . ARG 135 135 ? A 3.533 -3.658 -5.211 1 1 A ARG 0.590 1
ATOM 94 C CB . ARG 135 135 ? A 5.467 -4.871 -7.581 1 1 A ARG 0.590 1
ATOM 95 C CG . ARG 135 135 ? A 5.823 -4.872 -9.085 1 1 A ARG 0.590 1
ATOM 96 C CD . ARG 135 135 ? A 4.819 -4.173 -10.004 1 1 A ARG 0.590 1
ATOM 97 N NE . ARG 135 135 ? A 5.436 -4.156 -11.355 1 1 A ARG 0.590 1
ATOM 98 C CZ . ARG 135 135 ? A 4.824 -4.300 -12.536 1 1 A ARG 0.590 1
ATOM 99 N NH1 . ARG 135 135 ? A 3.545 -4.632 -12.634 1 1 A ARG 0.590 1
ATOM 100 N NH2 . ARG 135 135 ? A 5.575 -4.116 -13.613 1 1 A ARG 0.590 1
ATOM 101 N N . LEU 136 136 ? A 5.697 -3.662 -4.584 1 1 A LEU 0.570 1
ATOM 102 C CA . LEU 136 136 ? A 5.454 -3.600 -3.147 1 1 A LEU 0.570 1
ATOM 103 C C . LEU 136 136 ? A 4.905 -2.263 -2.666 1 1 A LEU 0.570 1
ATOM 104 O O . LEU 136 136 ? A 3.996 -2.209 -1.842 1 1 A LEU 0.570 1
ATOM 105 C CB . LEU 136 136 ? A 6.718 -3.985 -2.340 1 1 A LEU 0.570 1
ATOM 106 C CG . LEU 136 136 ? A 7.130 -5.463 -2.517 1 1 A LEU 0.570 1
ATOM 107 C CD1 . LEU 136 136 ? A 8.473 -5.771 -1.841 1 1 A LEU 0.570 1
ATOM 108 C CD2 . LEU 136 136 ? A 6.078 -6.425 -1.949 1 1 A LEU 0.570 1
ATOM 109 N N . ARG 137 137 ? A 5.398 -1.126 -3.192 1 1 A ARG 0.570 1
ATOM 110 C CA . ARG 137 137 ? A 4.900 0.198 -2.839 1 1 A ARG 0.570 1
ATOM 111 C C . ARG 137 137 ? A 3.429 0.430 -3.180 1 1 A ARG 0.570 1
ATOM 112 O O . ARG 137 137 ? A 2.714 1.125 -2.456 1 1 A ARG 0.570 1
ATOM 113 C CB . ARG 137 137 ? A 5.791 1.311 -3.439 1 1 A ARG 0.570 1
ATOM 114 C CG . ARG 137 137 ? A 7.101 1.515 -2.647 1 1 A ARG 0.570 1
ATOM 115 C CD . ARG 137 137 ? A 8.071 2.528 -3.266 1 1 A ARG 0.570 1
ATOM 116 N NE . ARG 137 137 ? A 9.168 2.764 -2.267 1 1 A ARG 0.570 1
ATOM 117 C CZ . ARG 137 137 ? A 9.122 3.638 -1.252 1 1 A ARG 0.570 1
ATOM 118 N NH1 . ARG 137 137 ? A 8.057 4.400 -1.045 1 1 A ARG 0.570 1
ATOM 119 N NH2 . ARG 137 137 ? A 10.174 3.763 -0.451 1 1 A ARG 0.570 1
ATOM 120 N N . LYS 138 138 ? A 2.920 -0.192 -4.263 1 1 A LYS 0.520 1
ATOM 121 C CA . LYS 138 138 ? A 1.494 -0.269 -4.542 1 1 A LYS 0.520 1
ATOM 122 C C . LYS 138 138 ? A 0.693 -0.964 -3.437 1 1 A LYS 0.520 1
ATOM 123 O O . LYS 138 138 ? A -0.394 -0.527 -3.067 1 1 A LYS 0.520 1
ATOM 124 C CB . LYS 138 138 ? A 1.238 -1.005 -5.885 1 1 A LYS 0.520 1
ATOM 125 C CG . LYS 138 138 ? A 1.747 -0.218 -7.105 1 1 A LYS 0.520 1
ATOM 126 C CD . LYS 138 138 ? A 1.710 -0.958 -8.459 1 1 A LYS 0.520 1
ATOM 127 C CE . LYS 138 138 ? A 0.314 -1.210 -9.044 1 1 A LYS 0.520 1
ATOM 128 N NZ . LYS 138 138 ? A -0.301 -2.431 -8.472 1 1 A LYS 0.520 1
ATOM 129 N N . GLN 139 139 ? A 1.227 -2.058 -2.861 1 1 A GLN 0.500 1
ATOM 130 C CA . GLN 139 139 ? A 0.630 -2.756 -1.735 1 1 A GLN 0.500 1
ATOM 131 C C . GLN 139 139 ? A 0.599 -1.900 -0.481 1 1 A GLN 0.500 1
ATOM 132 O O . GLN 139 139 ? A -0.397 -1.864 0.238 1 1 A GLN 0.500 1
ATOM 133 C CB . GLN 139 139 ? A 1.362 -4.085 -1.458 1 1 A GLN 0.500 1
ATOM 134 C CG . GLN 139 139 ? A 1.370 -5.010 -2.689 1 1 A GLN 0.500 1
ATOM 135 C CD . GLN 139 139 ? A 2.212 -6.257 -2.421 1 1 A GLN 0.500 1
ATOM 136 O OE1 . GLN 139 139 ? A 2.289 -6.780 -1.312 1 1 A GLN 0.500 1
ATOM 137 N NE2 . GLN 139 139 ? A 2.870 -6.756 -3.494 1 1 A GLN 0.500 1
ATOM 138 N N . MET 140 140 ? A 1.682 -1.140 -0.225 1 1 A MET 0.530 1
ATOM 139 C CA . MET 140 140 ? A 1.784 -0.179 0.862 1 1 A MET 0.530 1
ATOM 140 C C . MET 140 140 ? A 0.745 0.933 0.810 1 1 A MET 0.530 1
ATOM 141 O O . MET 140 140 ? A 0.182 1.312 1.836 1 1 A MET 0.530 1
ATOM 142 C CB . MET 140 140 ? A 3.173 0.497 0.897 1 1 A MET 0.530 1
ATOM 143 C CG . MET 140 140 ? A 4.340 -0.463 1.164 1 1 A MET 0.530 1
ATOM 144 S SD . MET 140 140 ? A 5.950 0.376 1.097 1 1 A MET 0.530 1
ATOM 145 C CE . MET 140 140 ? A 6.876 -1.176 1.231 1 1 A MET 0.530 1
ATOM 146 N N . ALA 141 141 ? A 0.455 1.477 -0.389 1 1 A ALA 0.490 1
ATOM 147 C CA . ALA 141 141 ? A -0.602 2.444 -0.628 1 1 A ALA 0.490 1
ATOM 148 C C . ALA 141 141 ? A -1.985 1.892 -0.274 1 1 A ALA 0.490 1
ATOM 149 O O . ALA 141 141 ? A -2.792 2.555 0.378 1 1 A ALA 0.490 1
ATOM 150 C CB . ALA 141 141 ? A -0.510 2.912 -2.095 1 1 A ALA 0.490 1
ATOM 151 N N . VAL 142 142 ? A -2.256 0.619 -0.628 1 1 A VAL 0.460 1
ATOM 152 C CA . VAL 142 142 ? A -3.453 -0.103 -0.214 1 1 A VAL 0.460 1
ATOM 153 C C . VAL 142 142 ? A -3.552 -0.274 1.299 1 1 A VAL 0.460 1
ATOM 154 O O . VAL 142 142 ? A -4.605 -0.036 1.888 1 1 A VAL 0.460 1
ATOM 155 C CB . VAL 142 142 ? A -3.561 -1.446 -0.935 1 1 A VAL 0.460 1
ATOM 156 C CG1 . VAL 142 142 ? A -4.711 -2.318 -0.389 1 1 A VAL 0.460 1
ATOM 157 C CG2 . VAL 142 142 ? A -3.781 -1.160 -2.433 1 1 A VAL 0.460 1
ATOM 158 N N . LYS 143 143 ? A -2.452 -0.642 2.001 1 1 A LYS 0.490 1
ATOM 159 C CA . LYS 143 143 ? A -2.460 -0.834 3.453 1 1 A LYS 0.490 1
ATOM 160 C C . LYS 143 143 ? A -2.825 0.429 4.210 1 1 A LYS 0.490 1
ATOM 161 O O . LYS 143 143 ? A -3.564 0.411 5.192 1 1 A LYS 0.490 1
ATOM 162 C CB . LYS 143 143 ? A -1.117 -1.345 4.050 1 1 A LYS 0.490 1
ATOM 163 C CG . LYS 143 143 ? A -0.436 -2.547 3.372 1 1 A LYS 0.490 1
ATOM 164 C CD . LYS 143 143 ? A -1.343 -3.708 2.923 1 1 A LYS 0.490 1
ATOM 165 C CE . LYS 143 143 ? A -2.038 -4.475 4.048 1 1 A LYS 0.490 1
ATOM 166 N NZ . LYS 143 143 ? A -2.887 -5.539 3.462 1 1 A LYS 0.490 1
ATOM 167 N N . LYS 144 144 ? A -2.326 1.571 3.720 1 1 A LYS 0.490 1
ATOM 168 C CA . LYS 144 144 ? A -2.656 2.889 4.201 1 1 A LYS 0.490 1
ATOM 169 C C . LYS 144 144 ? A -4.147 3.208 4.091 1 1 A LYS 0.490 1
ATOM 170 O O . LYS 144 144 ? A -4.736 3.733 5.031 1 1 A LYS 0.490 1
ATOM 171 C CB . LYS 144 144 ? A -1.753 3.892 3.449 1 1 A LYS 0.490 1
ATOM 172 C CG . LYS 144 144 ? A -0.281 3.759 3.891 1 1 A LYS 0.490 1
ATOM 173 C CD . LYS 144 144 ? A 0.722 4.429 2.938 1 1 A LYS 0.490 1
ATOM 174 C CE . LYS 144 144 ? A 2.171 4.275 3.407 1 1 A LYS 0.490 1
ATOM 175 N NZ . LYS 144 144 ? A 3.074 4.942 2.445 1 1 A LYS 0.490 1
ATOM 176 N N . TYR 145 145 ? A -4.824 2.839 2.984 1 1 A TYR 0.520 1
ATOM 177 C CA . TYR 145 145 ? A -6.270 2.974 2.855 1 1 A TYR 0.520 1
ATOM 178 C C . TYR 145 145 ? A -7.058 2.138 3.880 1 1 A TYR 0.520 1
ATOM 179 O O . TYR 145 145 ? A -8.010 2.632 4.486 1 1 A TYR 0.520 1
ATOM 180 C CB . TYR 145 145 ? A -6.708 2.691 1.390 1 1 A TYR 0.520 1
ATOM 181 C CG . TYR 145 145 ? A -8.207 2.678 1.224 1 1 A TYR 0.520 1
ATOM 182 C CD1 . TYR 145 145 ? A -8.962 3.863 1.236 1 1 A TYR 0.520 1
ATOM 183 C CD2 . TYR 145 145 ? A -8.873 1.445 1.139 1 1 A TYR 0.520 1
ATOM 184 C CE1 . TYR 145 145 ? A -10.358 3.812 1.106 1 1 A TYR 0.520 1
ATOM 185 C CE2 . TYR 145 145 ? A -10.267 1.393 1.015 1 1 A TYR 0.520 1
ATOM 186 C CZ . TYR 145 145 ? A -11.005 2.580 0.968 1 1 A TYR 0.520 1
ATOM 187 O OH . TYR 145 145 ? A -12.402 2.547 0.797 1 1 A TYR 0.520 1
ATOM 188 N N . LEU 146 146 ? A -6.663 0.869 4.138 1 1 A LEU 0.530 1
ATOM 189 C CA . LEU 146 146 ? A -7.296 0.034 5.158 1 1 A LEU 0.530 1
ATOM 190 C C . LEU 146 146 ? A -7.128 0.621 6.555 1 1 A LEU 0.530 1
ATOM 191 O O . LEU 146 146 ? A -8.071 0.702 7.344 1 1 A LEU 0.530 1
ATOM 192 C CB . LEU 146 146 ? A -6.777 -1.432 5.160 1 1 A LEU 0.530 1
ATOM 193 C CG . LEU 146 146 ? A -7.296 -2.372 4.042 1 1 A LEU 0.530 1
ATOM 194 C CD1 . LEU 146 146 ? A -8.819 -2.320 3.868 1 1 A LEU 0.530 1
ATOM 195 C CD2 . LEU 146 146 ? A -6.589 -2.194 2.695 1 1 A LEU 0.530 1
ATOM 196 N N . ASN 147 147 ? A -5.917 1.125 6.855 1 1 A ASN 0.530 1
ATOM 197 C CA . ASN 147 147 ? A -5.635 1.900 8.049 1 1 A ASN 0.530 1
ATOM 198 C C . ASN 147 147 ? A -6.500 3.166 8.145 1 1 A ASN 0.530 1
ATOM 199 O O . ASN 147 147 ? A -7.007 3.494 9.213 1 1 A ASN 0.530 1
ATOM 200 C CB . ASN 147 147 ? A -4.126 2.256 8.117 1 1 A ASN 0.530 1
ATOM 201 C CG . ASN 147 147 ? A -3.317 1.004 8.450 1 1 A ASN 0.530 1
ATOM 202 O OD1 . ASN 147 147 ? A -3.808 0.068 9.078 1 1 A ASN 0.530 1
ATOM 203 N ND2 . ASN 147 147 ? A -2.012 0.989 8.087 1 1 A ASN 0.530 1
ATOM 204 N N . SER 148 148 ? A -6.734 3.885 7.031 1 1 A SER 0.520 1
ATOM 205 C CA . SER 148 148 ? A -7.640 5.035 6.957 1 1 A SER 0.520 1
ATOM 206 C C . SER 148 148 ? A -9.088 4.781 7.325 1 1 A SER 0.520 1
ATOM 207 O O . SER 148 148 ? A -9.702 5.619 7.982 1 1 A SER 0.520 1
ATOM 208 C CB . SER 148 148 ? A -7.627 5.787 5.599 1 1 A SER 0.520 1
ATOM 209 O OG . SER 148 148 ? A -6.381 6.458 5.421 1 1 A SER 0.520 1
ATOM 210 N N . ILE 149 149 ? A -9.696 3.640 6.948 1 1 A ILE 0.570 1
ATOM 211 C CA . ILE 149 149 ? A -11.022 3.279 7.447 1 1 A ILE 0.570 1
ATOM 212 C C . ILE 149 149 ? A -11.011 2.940 8.925 1 1 A ILE 0.570 1
ATOM 213 O O . ILE 149 149 ? A -11.885 3.353 9.689 1 1 A ILE 0.570 1
ATOM 214 C CB . ILE 149 149 ? A -11.662 2.167 6.637 1 1 A ILE 0.570 1
ATOM 215 C CG1 . ILE 149 149 ? A -11.916 2.719 5.221 1 1 A ILE 0.570 1
ATOM 216 C CG2 . ILE 149 149 ? A -12.990 1.699 7.284 1 1 A ILE 0.570 1
ATOM 217 C CD1 . ILE 149 149 ? A -12.399 1.659 4.235 1 1 A ILE 0.570 1
ATOM 218 N N . LEU 150 150 ? A -9.974 2.212 9.384 1 1 A LEU 0.630 1
ATOM 219 C CA . LEU 150 150 ? A -9.750 1.917 10.788 1 1 A LEU 0.630 1
ATOM 220 C C . LEU 150 150 ? A -9.620 3.204 11.606 1 1 A LEU 0.630 1
ATOM 221 O O . LEU 150 150 ? A -10.212 3.324 12.672 1 1 A LEU 0.630 1
ATOM 222 C CB . LEU 150 150 ? A -8.495 1.020 10.951 1 1 A LEU 0.630 1
ATOM 223 C CG . LEU 150 150 ? A -8.712 -0.515 10.903 1 1 A LEU 0.630 1
ATOM 224 C CD1 . LEU 150 150 ? A -9.744 -0.989 9.867 1 1 A LEU 0.630 1
ATOM 225 C CD2 . LEU 150 150 ? A -7.371 -1.234 10.662 1 1 A LEU 0.630 1
ATOM 226 N N . ASN 151 151 ? A -8.926 4.237 11.080 1 1 A ASN 0.590 1
ATOM 227 C CA . ASN 151 151 ? A -8.850 5.579 11.650 1 1 A ASN 0.590 1
ATOM 228 C C . ASN 151 151 ? A -10.208 6.209 11.950 1 1 A ASN 0.590 1
ATOM 229 O O . ASN 151 151 ? A -10.361 6.857 12.982 1 1 A ASN 0.590 1
ATOM 230 C CB . ASN 151 151 ? A -7.999 6.561 10.788 1 1 A ASN 0.590 1
ATOM 231 C CG . ASN 151 151 ? A -6.517 6.201 10.858 1 1 A ASN 0.590 1
ATOM 232 O OD1 . ASN 151 151 ? A -6.023 5.713 11.875 1 1 A ASN 0.590 1
ATOM 233 N ND2 . ASN 151 151 ? A -5.764 6.492 9.769 1 1 A ASN 0.590 1
ATOM 234 N N . GLY 152 152 ? A -11.245 6.001 11.109 1 1 A GLY 0.510 1
ATOM 235 C CA . GLY 152 152 ? A -12.591 6.482 11.419 1 1 A GLY 0.510 1
ATOM 236 C C . GLY 152 152 ? A -13.247 5.786 12.589 1 1 A GLY 0.510 1
ATOM 237 O O . GLY 152 152 ? A -14.015 6.383 13.336 1 1 A GLY 0.510 1
ATOM 238 N N . LYS 153 153 ? A -12.943 4.492 12.794 1 1 A LYS 0.530 1
ATOM 239 C CA . LYS 153 153 ? A -13.477 3.720 13.901 1 1 A LYS 0.530 1
ATOM 240 C C . LYS 153 153 ? A -12.707 3.908 15.198 1 1 A LYS 0.530 1
ATOM 241 O O . LYS 153 153 ? A -13.282 3.822 16.276 1 1 A LYS 0.530 1
ATOM 242 C CB . LYS 153 153 ? A -13.521 2.227 13.529 1 1 A LYS 0.530 1
ATOM 243 C CG . LYS 153 153 ? A -14.545 1.959 12.416 1 1 A LYS 0.530 1
ATOM 244 C CD . LYS 153 153 ? A -14.618 0.477 12.034 1 1 A LYS 0.530 1
ATOM 245 C CE . LYS 153 153 ? A -15.658 0.197 10.950 1 1 A LYS 0.530 1
ATOM 246 N NZ . LYS 153 153 ? A -15.646 -1.243 10.614 1 1 A LYS 0.530 1
ATOM 247 N N . ARG 154 154 ? A -11.406 4.251 15.120 1 1 A ARG 0.570 1
ATOM 248 C CA . ARG 154 154 ? A -10.554 4.542 16.270 1 1 A ARG 0.570 1
ATOM 249 C C . ARG 154 154 ? A -11.014 5.731 17.102 1 1 A ARG 0.570 1
ATOM 250 O O . ARG 154 154 ? A -10.731 5.819 18.288 1 1 A ARG 0.570 1
ATOM 251 C CB . ARG 154 154 ? A -9.102 4.880 15.841 1 1 A ARG 0.570 1
ATOM 252 C CG . ARG 154 154 ? A -8.244 3.687 15.392 1 1 A ARG 0.570 1
ATOM 253 C CD . ARG 154 154 ? A -6.878 4.118 14.859 1 1 A ARG 0.570 1
ATOM 254 N NE . ARG 154 154 ? A -6.202 2.889 14.321 1 1 A ARG 0.570 1
ATOM 255 C CZ . ARG 154 154 ? A -5.017 2.922 13.695 1 1 A ARG 0.570 1
ATOM 256 N NH1 . ARG 154 154 ? A -4.421 4.072 13.418 1 1 A ARG 0.570 1
ATOM 257 N NH2 . ARG 154 154 ? A -4.436 1.805 13.270 1 1 A ARG 0.570 1
ATOM 258 N N . SER 155 155 ? A -11.679 6.715 16.474 1 1 A SER 0.630 1
ATOM 259 C CA . SER 155 155 ? A -12.368 7.807 17.154 1 1 A SER 0.630 1
ATOM 260 C C . SER 155 155 ? A -13.588 7.407 17.967 1 1 A SER 0.630 1
ATOM 261 O O . SER 155 155 ? A -13.940 8.055 18.946 1 1 A SER 0.630 1
ATOM 262 C CB . SER 155 155 ? A -12.931 8.838 16.153 1 1 A SER 0.630 1
ATOM 263 O OG . SER 155 155 ? A -11.900 9.465 15.395 1 1 A SER 0.630 1
ATOM 264 N N . SER 156 156 ? A -14.329 6.395 17.481 1 1 A SER 0.460 1
ATOM 265 C CA . SER 156 156 ? A -15.502 5.811 18.115 1 1 A SER 0.460 1
ATOM 266 C C . SER 156 156 ? A -15.222 4.839 19.249 1 1 A SER 0.460 1
ATOM 267 O O . SER 156 156 ? A -16.056 4.689 20.139 1 1 A SER 0.460 1
ATOM 268 C CB . SER 156 156 ? A -16.333 4.990 17.103 1 1 A SER 0.460 1
ATOM 269 O OG . SER 156 156 ? A -16.847 5.825 16.065 1 1 A SER 0.460 1
ATOM 270 N N . GLU 157 157 ? A -14.090 4.115 19.173 1 1 A GLU 0.490 1
ATOM 271 C CA . GLU 157 157 ? A -13.597 3.178 20.174 1 1 A GLU 0.490 1
ATOM 272 C C . GLU 157 157 ? A -12.882 3.863 21.383 1 1 A GLU 0.490 1
ATOM 273 O O . GLU 157 157 ? A -12.711 5.111 21.382 1 1 A GLU 0.490 1
ATOM 274 C CB . GLU 157 157 ? A -12.605 2.176 19.501 1 1 A GLU 0.490 1
ATOM 275 C CG . GLU 157 157 ? A -13.281 1.130 18.567 1 1 A GLU 0.490 1
ATOM 276 C CD . GLU 157 157 ? A -12.352 0.221 17.747 1 1 A GLU 0.490 1
ATOM 277 O OE1 . GLU 157 157 ? A -11.105 0.375 17.781 1 1 A GLU 0.490 1
ATOM 278 O OE2 . GLU 157 157 ? A -12.925 -0.648 17.028 1 1 A GLU 0.490 1
ATOM 279 O OXT . GLU 157 157 ? A -12.510 3.124 22.341 1 1 A GLU 0.490 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.520
2 1 3 0.068
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 124 HIS 1 0.390
2 1 A 125 SER 1 0.430
3 1 A 126 ASP 1 0.250
4 1 A 127 ALA 1 0.420
5 1 A 128 VAL 1 0.490
6 1 A 129 PHE 1 0.510
7 1 A 130 THR 1 0.540
8 1 A 131 ASP 1 0.560
9 1 A 132 ASN 1 0.600
10 1 A 133 TYR 1 0.630
11 1 A 134 THR 1 0.580
12 1 A 135 ARG 1 0.590
13 1 A 136 LEU 1 0.570
14 1 A 137 ARG 1 0.570
15 1 A 138 LYS 1 0.520
16 1 A 139 GLN 1 0.500
17 1 A 140 MET 1 0.530
18 1 A 141 ALA 1 0.490
19 1 A 142 VAL 1 0.460
20 1 A 143 LYS 1 0.490
21 1 A 144 LYS 1 0.490
22 1 A 145 TYR 1 0.520
23 1 A 146 LEU 1 0.530
24 1 A 147 ASN 1 0.530
25 1 A 148 SER 1 0.520
26 1 A 149 ILE 1 0.570
27 1 A 150 LEU 1 0.630
28 1 A 151 ASN 1 0.590
29 1 A 152 GLY 1 0.510
30 1 A 153 LYS 1 0.530
31 1 A 154 ARG 1 0.570
32 1 A 155 SER 1 0.630
33 1 A 156 SER 1 0.460
34 1 A 157 GLU 1 0.490
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
;This SWISS-MODEL protein model is copyright.
It is produced by the SWISS-MODEL server, developed by the Computational
Structural Biology Group at the SIB Swiss Institute of Bioinformatics at the
Biozentrum, University of Basel (https://swissmodel.expasy.org). This
model is licensed under the CC BY-SA 4.0 Creative Commons
Attribution-ShareAlike 4.0 International License
(https://creativecommons.org/licenses/by-sa/4.0/legalcode), i.e. you
can copy and redistribute the model in any medium or format,
transform and build upon the model for any purpose, even
commercially, under the following terms:
Attribution - You must give appropriate credit, provide a link to
the license, and indicate if changes were made. You may do so in any
reasonable manner, but not in any way that suggests the licensor
endorses you or your use. When you publish, patent or distribute
results that were fully or partially based on the model, please cite
the corresponding papers mentioned under JRNL.
ShareAlike - If you remix, transform, or build upon the material,
you must distribute your contributions under the same license as the
original.
No additional restrictions - you may not apply legal terms or
technological measures that legally restrict others from doing
anything the license permits.
Find a human-readable summary of (and not a substitute for) the
CC BY-SA 4.0 license at this link:
https://creativecommons.org/licenses/by-sa/4.0/
;
https://creativecommons.org/licenses/by-sa/4.0/legalcode
2 disclaimer
;The SWISS-MODEL SERVER produces theoretical models for
proteins. The results of any theoretical modelling procedure is
NON-EXPERIMENTAL and MUST be considered with care. These models may
contain significant errors. This is especially true for automated
modeling since there is no human intervention during model
building. Please read the header section and the logfile carefully
to know what templates and alignments were used during the model
building process. All information by the SWISS-MODEL SERVER is
provided "AS-IS", without any warranty, expressed or implied.
;
https://swissmodel.expasy.org/docs/terms_of_use#disclaimer
#