data_SMR-2d954558943ed11cf414499bed44bb2c_4
_entry.id SMR-2d954558943ed11cf414499bed44bb2c_4
_struct.entry_id SMR-2d954558943ed11cf414499bed44bb2c_4
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - A0A250Y9U1/ A0A250Y9U1_CASCN, RING-type E3 ubiquitin transferase
  - A0A2J8IWF5/ A0A2J8IWF5_PANTR, RING-type E3 ubiquitin transferase
  - A0A2J8RVK3/ A0A2J8RVK3_PONAB, RING-type E3 ubiquitin transferase
  - A0A2K5JD12/ A0A2K5JD12_COLAP, RING-type E3 ubiquitin transferase
  - A0A2K6AAF7/ A0A2K6AAF7_MANLE, RING-type E3 ubiquitin transferase
  - A0A2K6LHG2/ A0A2K6LHG2_RHIBE, RING-type E3 ubiquitin transferase
  - A0A2K6NLM6/ A0A2K6NLM6_RHIRO, RING-type E3 ubiquitin transferase
  - A0A2R9BGV6/ A0A2R9BGV6_PANPA, RING-type E3 ubiquitin transferase
  - A0A8D2FV62/ A0A8D2FV62_THEGE, RING-type E3 ubiquitin transferase
  - A0AAJ7M2T0/ A0AAJ7M2T0_RHIBE, RING-type E3 ubiquitin transferase
  - Q96A37/ RN166_HUMAN, E3 ubiquitin-protein ligase RNF166

Estimated model accuracy of this model is 0.122, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries A0A250Y9U1, A0A2J8IWF5, A0A2J8RVK3, A0A2K5JD12, A0A2K6AAF7, A0A2K6LHG2, A0A2K6NLM6, A0A2R9BGV6, A0A8D2FV62, A0AAJ7M2T0, Q96A37'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 5 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 16713.470 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP A0A2J8RVK3_PONAB A0A2J8RVK3 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'RING-type E3 ubiquitin transferase'
2 1 UNP A0A2J8IWF5_PANTR A0A2J8IWF5 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'RING-type E3 ubiquitin transferase'
3 1 UNP A0A2K6NLM6_RHIRO A0A2K6NLM6 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'RING-type E3 ubiquitin transferase'
4 1 UNP A0A2R9BGV6_PANPA A0A2R9BGV6 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'RING-type E3 ubiquitin transferase'
5 1 UNP A0A2K6AAF7_MANLE A0A2K6AAF7 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'RING-type E3 ubiquitin transferase'
6 1 UNP A0AAJ7M2T0_RHIBE A0AAJ7M2T0 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'RING-type E3 ubiquitin transferase'
7 1 UNP A0A2K6LHG2_RHIBE A0A2K6LHG2 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'RING-type E3 ubiquitin transferase'
8 1 UNP A0A2K5JD12_COLAP A0A2K5JD12 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'RING-type E3 ubiquitin transferase'
9 1 UNP A0A8D2FV62_THEGE A0A8D2FV62 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'RING-type E3 ubiquitin transferase'
10 1 UNP A0A250Y9U1_CASCN A0A250Y9U1 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'RING-type E3 ubiquitin transferase'
11 1 UNP RN166_HUMAN Q96A37 1
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;
'E3 ubiquitin-protein ligase RNF166'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 128 1 128
2 2 1 128 1 128
3 3 1 128 1 128
4 4 1 128 1 128
5 5 1 128 1 128
6 6 1 128 1 128
7 7 1 128 1 128
8 8 1 128 1 128
9 9 1 128 1 128
10 10 1 128 1 128
11 11 1 128 1 128
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . A0A2J8RVK3_PONAB A0A2J8RVK3 . 1 128 9601
'Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)' 2018-03-28
5DBB30DA8B718284
1 UNP . A0A2J8IWF5_PANTR A0A2J8IWF5 . 1 128 9598 'Pan troglodytes (Chimpanzee)'
2018-03-28 5DBB30DA8B718284
1 UNP . A0A2K6NLM6_RHIRO A0A2K6NLM6 . 1 128 61622
'Rhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)'
2018-03-28 5DBB30DA8B718284
1 UNP . A0A2R9BGV6_PANPA A0A2R9BGV6 . 1 128 9597
'Pan paniscus (Pygmy chimpanzee) (Bonobo)' 2018-06-20 5DBB30DA8B718284
1 UNP . A0A2K6AAF7_MANLE A0A2K6AAF7 . 1 128 9568
'Mandrillus leucophaeus (Drill) (Papio leucophaeus)' 2018-03-28 5DBB30DA8B718284
1 UNP . A0AAJ7M2T0_RHIBE A0AAJ7M2T0 . 1 128 61621
'Rhinopithecus bieti (Black snub-nosed monkey) (Pygathrix bieti)' 2024-07-24
5DBB30DA8B718284
1 UNP . A0A2K6LHG2_RHIBE A0A2K6LHG2 . 1 128 61621
'Rhinopithecus bieti (Black snub-nosed monkey) (Pygathrix bieti)' 2018-03-28
5DBB30DA8B718284
1 UNP . A0A2K5JD12_COLAP A0A2K5JD12 . 1 128 336983
"Colobus angolensis palliatus (Peters' Angolan colobus)" 2018-03-28
5DBB30DA8B718284
1 UNP . A0A8D2FV62_THEGE A0A8D2FV62 . 1 128 9565
'Theropithecus gelada (Gelada baboon)' 2022-01-19 5DBB30DA8B718284
1 UNP . A0A250Y9U1_CASCN A0A250Y9U1 . 1 128 51338
'Castor canadensis (American beaver)' 2017-11-22 5DBB30DA8B718284
1 UNP . RN166_HUMAN Q96A37 Q96A37-2 1 128 9606 'Homo sapiens (Human)' 2001-12-01
5DBB30DA8B718284
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no A
;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;

;MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNR
VVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 ARG .
1 3 VAL .
1 4 HIS .
1 5 ILE .
1 6 SER .
1 7 SER .
1 8 CYS .
1 9 LEU .
1 10 LYS .
1 11 VAL .
1 12 GLN .
1 13 GLU .
1 14 GLN .
1 15 MET .
1 16 ALA .
1 17 ASN .
1 18 CYS .
1 19 PRO .
1 20 LYS .
1 21 PHE .
1 22 VAL .
1 23 PRO .
1 24 VAL .
1 25 VAL .
1 26 PRO .
1 27 THR .
1 28 SER .
1 29 GLN .
1 30 PRO .
1 31 ILE .
1 32 PRO .
1 33 SER .
1 34 ASN .
1 35 ILE .
1 36 PRO .
1 37 ASN .
1 38 ARG .
1 39 SER .
1 40 THR .
1 41 PHE .
1 42 ALA .
1 43 CYS .
1 44 PRO .
1 45 TYR .
1 46 CYS .
1 47 GLY .
1 48 ALA .
1 49 ARG .
1 50 ASN .
1 51 LEU .
1 52 ASP .
1 53 GLN .
1 54 GLN .
1 55 GLU .
1 56 LEU .
1 57 VAL .
1 58 LYS .
1 59 HIS .
1 60 CYS .
1 61 VAL .
1 62 GLU .
1 63 SER .
1 64 HIS .
1 65 ARG .
1 66 SER .
1 67 ASP .
1 68 PRO .
1 69 ASN .
1 70 ARG .
1 71 VAL .
1 72 VAL .
1 73 CYS .
1 74 PRO .
1 75 ILE .
1 76 CYS .
1 77 SER .
1 78 ALA .
1 79 MET .
1 80 PRO .
1 81 TRP .
1 82 GLY .
1 83 ASP .
1 84 PRO .
1 85 SER .
1 86 TYR .
1 87 LYS .
1 88 SER .
1 89 ALA .
1 90 ASN .
1 91 PHE .
1 92 LEU .
1 93 GLN .
1 94 HIS .
1 95 LEU .
1 96 LEU .
1 97 HIS .
1 98 ARG .
1 99 HIS .
1 100 LYS .
1 101 PHE .
1 102 SER .
1 103 TYR .
1 104 ASP .
1 105 THR .
1 106 PHE .
1 107 VAL .
1 108 ASP .
1 109 TYR .
1 110 SER .
1 111 ILE .
1 112 ASP .
1 113 GLU .
1 114 GLU .
1 115 ALA .
1 116 ALA .
1 117 PHE .
1 118 GLN .
1 119 ALA .
1 120 ALA .
1 121 LEU .
1 122 ALA .
1 123 LEU .
1 124 SER .
1 125 LEU .
1 126 SER .
1 127 GLU .
1 128 ASN .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 1 MET MET A .
A 1 2 ARG 2 2 ARG ARG A .
A 1 3 VAL 3 3 VAL VAL A .
A 1 4 HIS 4 4 HIS HIS A .
A 1 5 ILE 5 5 ILE ILE A .
A 1 6 SER 6 6 SER SER A .
A 1 7 SER 7 7 SER SER A .
A 1 8 CYS 8 8 CYS CYS A .
A 1 9 LEU 9 9 LEU LEU A .
A 1 10 LYS 10 10 LYS LYS A .
A 1 11 VAL 11 11 VAL VAL A .
A 1 12 GLN 12 12 GLN GLN A .
A 1 13 GLU 13 13 GLU GLU A .
A 1 14 GLN 14 14 GLN GLN A .
A 1 15 MET 15 15 MET MET A .
A 1 16 ALA 16 16 ALA ALA A .
A 1 17 ASN 17 17 ASN ASN A .
A 1 18 CYS 18 18 CYS CYS A .
A 1 19 PRO 19 19 PRO PRO A .
A 1 20 LYS 20 20 LYS LYS A .
A 1 21 PHE 21 21 PHE PHE A .
A 1 22 VAL 22 22 VAL VAL A .
A 1 23 PRO 23 23 PRO PRO A .
A 1 24 VAL 24 24 VAL VAL A .
A 1 25 VAL 25 25 VAL VAL A .
A 1 26 PRO 26 26 PRO PRO A .
A 1 27 THR 27 27 THR THR A .
A 1 28 SER 28 28 SER SER A .
A 1 29 GLN 29 29 GLN GLN A .
A 1 30 PRO 30 30 PRO PRO A .
A 1 31 ILE 31 ? ? ? A .
A 1 32 PRO 32 ? ? ? A .
A 1 33 SER 33 ? ? ? A .
A 1 34 ASN 34 ? ? ? A .
A 1 35 ILE 35 ? ? ? A .
A 1 36 PRO 36 ? ? ? A .
A 1 37 ASN 37 ? ? ? A .
A 1 38 ARG 38 ? ? ? A .
A 1 39 SER 39 ? ? ? A .
A 1 40 THR 40 ? ? ? A .
A 1 41 PHE 41 ? ? ? A .
A 1 42 ALA 42 ? ? ? A .
A 1 43 CYS 43 ? ? ? A .
A 1 44 PRO 44 ? ? ? A .
A 1 45 TYR 45 ? ? ? A .
A 1 46 CYS 46 ? ? ? A .
A 1 47 GLY 47 ? ? ? A .
A 1 48 ALA 48 ? ? ? A .
A 1 49 ARG 49 ? ? ? A .
A 1 50 ASN 50 ? ? ? A .
A 1 51 LEU 51 ? ? ? A .
A 1 52 ASP 52 ? ? ? A .
A 1 53 GLN 53 ? ? ? A .
A 1 54 GLN 54 ? ? ? A .
A 1 55 GLU 55 ? ? ? A .
A 1 56 LEU 56 ? ? ? A .
A 1 57 VAL 57 ? ? ? A .
A 1 58 LYS 58 ? ? ? A .
A 1 59 HIS 59 ? ? ? A .
A 1 60 CYS 60 ? ? ? A .
A 1 61 VAL 61 ? ? ? A .
A 1 62 GLU 62 ? ? ? A .
A 1 63 SER 63 ? ? ? A .
A 1 64 HIS 64 ? ? ? A .
A 1 65 ARG 65 ? ? ? A .
A 1 66 SER 66 ? ? ? A .
A 1 67 ASP 67 ? ? ? A .
A 1 68 PRO 68 ? ? ? A .
A 1 69 ASN 69 ? ? ? A .
A 1 70 ARG 70 ? ? ? A .
A 1 71 VAL 71 ? ? ? A .
A 1 72 VAL 72 ? ? ? A .
A 1 73 CYS 73 ? ? ? A .
A 1 74 PRO 74 ? ? ? A .
A 1 75 ILE 75 ? ? ? A .
A 1 76 CYS 76 ? ? ? A .
A 1 77 SER 77 ? ? ? A .
A 1 78 ALA 78 ? ? ? A .
A 1 79 MET 79 ? ? ? A .
A 1 80 PRO 80 ? ? ? A .
A 1 81 TRP 81 ? ? ? A .
A 1 82 GLY 82 ? ? ? A .
A 1 83 ASP 83 ? ? ? A .
A 1 84 PRO 84 ? ? ? A .
A 1 85 SER 85 ? ? ? A .
A 1 86 TYR 86 ? ? ? A .
A 1 87 LYS 87 ? ? ? A .
A 1 88 SER 88 ? ? ? A .
A 1 89 ALA 89 ? ? ? A .
A 1 90 ASN 90 ? ? ? A .
A 1 91 PHE 91 ? ? ? A .
A 1 92 LEU 92 ? ? ? A .
A 1 93 GLN 93 ? ? ? A .
A 1 94 HIS 94 ? ? ? A .
A 1 95 LEU 95 ? ? ? A .
A 1 96 LEU 96 ? ? ? A .
A 1 97 HIS 97 ? ? ? A .
A 1 98 ARG 98 ? ? ? A .
A 1 99 HIS 99 ? ? ? A .
A 1 100 LYS 100 ? ? ? A .
A 1 101 PHE 101 ? ? ? A .
A 1 102 SER 102 ? ? ? A .
A 1 103 TYR 103 ? ? ? A .
A 1 104 ASP 104 ? ? ? A .
A 1 105 THR 105 ? ? ? A .
A 1 106 PHE 106 ? ? ? A .
A 1 107 VAL 107 ? ? ? A .
A 1 108 ASP 108 ? ? ? A .
A 1 109 TYR 109 ? ? ? A .
A 1 110 SER 110 ? ? ? A .
A 1 111 ILE 111 ? ? ? A .
A 1 112 ASP 112 ? ? ? A .
A 1 113 GLU 113 ? ? ? A .
A 1 114 GLU 114 ? ? ? A .
A 1 115 ALA 115 ? ? ? A .
A 1 116 ALA 116 ? ? ? A .
A 1 117 PHE 117 ? ? ? A .
A 1 118 GLN 118 ? ? ? A .
A 1 119 ALA 119 ? ? ? A .
A 1 120 ALA 120 ? ? ? A .
A 1 121 LEU 121 ? ? ? A .
A 1 122 ALA 122 ? ? ? A .
A 1 123 LEU 123 ? ? ? A .
A 1 124 SER 124 ? ? ? A .
A 1 125 LEU 125 ? ? ? A .
A 1 126 SER 126 ? ? ? A .
A 1 127 GLU 127 ? ? ? A .
A 1 128 ASN 128 ? ? ? A .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'E3 ubiquitin-protein ligase RNF125 {PDB ID=5dka, label_asym_id=A, auth_asym_id=A, SMTL ID=5dka.1.A}'
'template structure' .
2 . target .
3 'Target-template alignment by BLAST to 5dka, label_asym_id=A'
'target-template alignment' .
4 'model 4' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-14
6 PDB https://www.wwpdb.org . 2024-11-08
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A A 1 1 A
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1
;MGSVLSTDSGKSAPASATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKW
TCPYCRAYLPSEGVPATDVAKRMKSEYKNCAECDTLVCLSEMRAHIRTCQKYIDKYGPLQELEETAARCV
CPFCQRELYEDSLLDHCITHHRSERRPVFCPLCRLIPDENPSSFSGSLIRHLQVSHTLFYDDFIDFNIIE
EALIRRVLDRSLLEYVNHSNTT
;

;MGSVLSTDSGKSAPASATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKW
TCPYCRAYLPSEGVPATDVAKRMKSEYKNCAECDTLVCLSEMRAHIRTCQKYIDKYGPLQELEETAARCV
CPFCQRELYEDSLLDHCITHHRSERRPVFCPLCRLIPDENPSSFSGSLIRHLQVSHTLFYDDFIDFNIIE
EALIRRVLDRSLLEYVNHSNTT
;

#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 112 208
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 5dka 2024-01-10
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 128
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 128 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'BLAST e-value' . 1.1e-11 35.052
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNRVVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN
2 1 2
MRAHIRTCQKYIDKYG-------------PLQELEETAARCVCPFC-QRELYEDSLLDHCITHHRSERRPVFCPLCRLIPDENPSSFSGSLIRHLQVSHTLFYDDFIDFNI-----------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 5dka.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 4' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . MET 1 1 ? A 5.521 -15.370 -11.408 1 1 A MET 0.570 1
ATOM 2 C CA . MET 1 1 ? A 6.398 -15.885 -12.521 1 1 A MET 0.570 1
ATOM 3 C C . MET 1 1 ? A 7.680 -16.585 -12.097 1 1 A MET 0.570 1
ATOM 4 O O . MET 1 1 ? A 8.019 -17.622 -12.650 1 1 A MET 0.570 1
ATOM 5 C CB . MET 1 1 ? A 6.740 -14.734 -13.503 1 1 A MET 0.570 1
ATOM 6 C CG . MET 1 1 ? A 7.445 -15.208 -14.798 1 1 A MET 0.570 1
ATOM 7 S SD . MET 1 1 ? A 6.484 -16.401 -15.780 1 1 A MET 0.570 1
ATOM 8 C CE . MET 1 1 ? A 5.317 -15.184 -16.457 1 1 A MET 0.570 1
ATOM 9 N N . ARG 2 2 ? A 8.435 -16.085 -11.087 1 1 A ARG 0.510 1
ATOM 10 C CA . ARG 2 2 ? A 9.681 -16.727 -10.679 1 1 A ARG 0.510 1
ATOM 11 C C . ARG 2 2 ? A 9.511 -18.162 -10.186 1 1 A ARG 0.510 1
ATOM 12 O O . ARG 2 2 ? A 10.261 -19.051 -10.564 1 1 A ARG 0.510 1
ATOM 13 C CB . ARG 2 2 ? A 10.411 -15.881 -9.608 1 1 A ARG 0.510 1
ATOM 14 C CG . ARG 2 2 ? A 11.848 -16.358 -9.282 1 1 A ARG 0.510 1
ATOM 15 C CD . ARG 2 2 ? A 12.815 -16.438 -10.474 1 1 A ARG 0.510 1
ATOM 16 N NE . ARG 2 2 ? A 12.901 -15.069 -11.099 1 1 A ARG 0.510 1
ATOM 17 C CZ . ARG 2 2 ? A 13.780 -14.121 -10.743 1 1 A ARG 0.510 1
ATOM 18 N NH1 . ARG 2 2 ? A 14.623 -14.289 -9.732 1 1 A ARG 0.510 1
ATOM 19 N NH2 . ARG 2 2 ? A 13.826 -12.979 -11.428 1 1 A ARG 0.510 1
ATOM 20 N N . VAL 3 3 ? A 8.456 -18.417 -9.389 1 1 A VAL 0.550 1
ATOM 21 C CA . VAL 3 3 ? A 8.016 -19.745 -8.980 1 1 A VAL 0.550 1
ATOM 22 C C . VAL 3 3 ? A 7.669 -20.652 -10.161 1 1 A VAL 0.550 1
ATOM 23 O O . VAL 3 3 ? A 8.043 -21.819 -10.177 1 1 A VAL 0.550 1
ATOM 24 C CB . VAL 3 3 ? A 6.842 -19.620 -8.008 1 1 A VAL 0.550 1
ATOM 25 C CG1 . VAL 3 3 ? A 6.295 -21.000 -7.592 1 1 A VAL 0.550 1
ATOM 26 C CG2 . VAL 3 3 ? A 7.324 -18.858 -6.754 1 1 A VAL 0.550 1
ATOM 27 N N . HIS 4 4 ? A 7.002 -20.118 -11.212 1 1 A HIS 0.520 1
ATOM 28 C CA . HIS 4 4 ? A 6.719 -20.861 -12.437 1 1 A HIS 0.520 1
ATOM 29 C C . HIS 4 4 ? A 7.970 -21.302 -13.183 1 1 A HIS 0.520 1
ATOM 30 O O . HIS 4 4 ? A 8.116 -22.461 -13.548 1 1 A HIS 0.520 1
ATOM 31 C CB . HIS 4 4 ? A 5.868 -20.015 -13.427 1 1 A HIS 0.520 1
ATOM 32 C CG . HIS 4 4 ? A 5.652 -20.679 -14.750 1 1 A HIS 0.520 1
ATOM 33 N ND1 . HIS 4 4 ? A 4.720 -21.684 -14.837 1 1 A HIS 0.520 1
ATOM 34 C CD2 . HIS 4 4 ? A 6.360 -20.583 -15.907 1 1 A HIS 0.520 1
ATOM 35 C CE1 . HIS 4 4 ? A 4.871 -22.190 -16.042 1 1 A HIS 0.520 1
ATOM 36 N NE2 . HIS 4 4 ? A 5.853 -21.560 -16.734 1 1 A HIS 0.520 1
ATOM 37 N N . ILE 5 5 ? A 8.949 -20.405 -13.417 1 1 A ILE 0.570 1
ATOM 38 C CA . ILE 5 5 ? A 10.112 -20.780 -14.212 1 1 A ILE 0.570 1
ATOM 39 C C . ILE 5 5 ? A 11.091 -21.673 -13.466 1 1 A ILE 0.570 1
ATOM 40 O O . ILE 5 5 ? A 11.867 -22.401 -14.084 1 1 A ILE 0.570 1
ATOM 41 C CB . ILE 5 5 ? A 10.868 -19.594 -14.779 1 1 A ILE 0.570 1
ATOM 42 C CG1 . ILE 5 5 ? A 11.473 -18.715 -13.674 1 1 A ILE 0.570 1
ATOM 43 C CG2 . ILE 5 5 ? A 9.956 -18.799 -15.740 1 1 A ILE 0.570 1
ATOM 44 C CD1 . ILE 5 5 ? A 12.495 -17.738 -14.233 1 1 A ILE 0.570 1
ATOM 45 N N . SER 6 6 ? A 11.029 -21.683 -12.113 1 1 A SER 0.580 1
ATOM 46 C CA . SER 6 6 ? A 11.781 -22.597 -11.261 1 1 A SER 0.580 1
ATOM 47 C C . SER 6 6 ? A 11.472 -24.045 -11.597 1 1 A SER 0.580 1
ATOM 48 O O . SER 6 6 ? A 12.371 -24.871 -11.700 1 1 A SER 0.580 1
ATOM 49 C CB . SER 6 6 ? A 11.449 -22.432 -9.746 1 1 A SER 0.580 1
ATOM 50 O OG . SER 6 6 ? A 11.962 -21.219 -9.191 1 1 A SER 0.580 1
ATOM 51 N N . SER 7 7 ? A 10.190 -24.400 -11.811 1 1 A SER 0.590 1
ATOM 52 C CA . SER 7 7 ? A 9.819 -25.776 -12.116 1 1 A SER 0.590 1
ATOM 53 C C . SER 7 7 ? A 9.338 -25.984 -13.541 1 1 A SER 0.590 1
ATOM 54 O O . SER 7 7 ? A 9.015 -27.104 -13.935 1 1 A SER 0.590 1
ATOM 55 C CB . SER 7 7 ? A 8.746 -26.303 -11.131 1 1 A SER 0.590 1
ATOM 56 O OG . SER 7 7 ? A 7.562 -25.503 -11.160 1 1 A SER 0.590 1
ATOM 57 N N . CYS 8 8 ? A 9.318 -24.937 -14.392 1 1 A CYS 0.620 1
ATOM 58 C CA . CYS 8 8 ? A 8.975 -25.077 -15.799 1 1 A CYS 0.620 1
ATOM 59 C C . CYS 8 8 ? A 10.008 -25.889 -16.565 1 1 A CYS 0.620 1
ATOM 60 O O . CYS 8 8 ? A 11.125 -25.442 -16.820 1 1 A CYS 0.620 1
ATOM 61 C CB . CYS 8 8 ? A 8.783 -23.712 -16.516 1 1 A CYS 0.620 1
ATOM 62 S SG . CYS 8 8 ? A 8.136 -23.834 -18.230 1 1 A CYS 0.620 1
ATOM 63 N N . LEU 9 9 ? A 9.632 -27.107 -16.997 1 1 A LEU 0.600 1
ATOM 64 C CA . LEU 9 9 ? A 10.524 -28.049 -17.647 1 1 A LEU 0.600 1
ATOM 65 C C . LEU 9 9 ? A 11.159 -27.523 -18.925 1 1 A LEU 0.600 1
ATOM 66 O O . LEU 9 9 ? A 12.342 -27.726 -19.160 1 1 A LEU 0.600 1
ATOM 67 C CB . LEU 9 9 ? A 9.791 -29.376 -17.954 1 1 A LEU 0.600 1
ATOM 68 C CG . LEU 9 9 ? A 9.264 -30.131 -16.713 1 1 A LEU 0.600 1
ATOM 69 C CD1 . LEU 9 9 ? A 8.501 -31.390 -17.142 1 1 A LEU 0.600 1
ATOM 70 C CD2 . LEU 9 9 ? A 10.393 -30.555 -15.769 1 1 A LEU 0.600 1
ATOM 71 N N . LYS 10 10 ? A 10.397 -26.793 -19.759 1 1 A LYS 0.650 1
ATOM 72 C CA . LYS 10 10 ? A 10.911 -26.141 -20.955 1 1 A LYS 0.650 1
ATOM 73 C C . LYS 10 10 ? A 11.908 -25.025 -20.692 1 1 A LYS 0.650 1
ATOM 74 O O . LYS 10 10 ? A 12.892 -24.876 -21.407 1 1 A LYS 0.650 1
ATOM 75 C CB . LYS 10 10 ? A 9.751 -25.615 -21.819 1 1 A LYS 0.650 1
ATOM 76 C CG . LYS 10 10 ? A 9.037 -26.780 -22.510 1 1 A LYS 0.650 1
ATOM 77 C CD . LYS 10 10 ? A 7.906 -26.311 -23.429 1 1 A LYS 0.650 1
ATOM 78 C CE . LYS 10 10 ? A 7.249 -27.481 -24.159 1 1 A LYS 0.650 1
ATOM 79 N NZ . LYS 10 10 ? A 6.030 -27.012 -24.851 1 1 A LYS 0.650 1
ATOM 80 N N . VAL 11 11 ? A 11.709 -24.216 -19.630 1 1 A VAL 0.650 1
ATOM 81 C CA . VAL 11 11 ? A 12.708 -23.241 -19.200 1 1 A VAL 0.650 1
ATOM 82 C C . VAL 11 11 ? A 13.982 -23.933 -18.769 1 1 A VAL 0.650 1
ATOM 83 O O . VAL 11 11 ? A 15.079 -23.563 -19.181 1 1 A VAL 0.650 1
ATOM 84 C CB . VAL 11 11 ? A 12.204 -22.403 -18.031 1 1 A VAL 0.650 1
ATOM 85 C CG1 . VAL 11 11 ? A 13.333 -21.540 -17.423 1 1 A VAL 0.650 1
ATOM 86 C CG2 . VAL 11 11 ? A 11.059 -21.511 -18.540 1 1 A VAL 0.650 1
ATOM 87 N N . GLN 12 12 ? A 13.842 -25.011 -17.970 1 1 A GLN 0.610 1
ATOM 88 C CA . GLN 12 12 ? A 14.952 -25.841 -17.557 1 1 A GLN 0.610 1
ATOM 89 C C . GLN 12 12 ? A 15.659 -26.495 -18.736 1 1 A GLN 0.610 1
ATOM 90 O O . GLN 12 12 ? A 16.878 -26.543 -18.797 1 1 A GLN 0.610 1
ATOM 91 C CB . GLN 12 12 ? A 14.508 -26.915 -16.530 1 1 A GLN 0.610 1
ATOM 92 C CG . GLN 12 12 ? A 13.942 -26.346 -15.202 1 1 A GLN 0.610 1
ATOM 93 C CD . GLN 12 12 ? A 15.001 -25.493 -14.504 1 1 A GLN 0.610 1
ATOM 94 O OE1 . GLN 12 12 ? A 16.124 -25.963 -14.326 1 1 A GLN 0.610 1
ATOM 95 N NE2 . GLN 12 12 ? A 14.672 -24.239 -14.125 1 1 A GLN 0.610 1
ATOM 96 N N . GLU 13 13 ? A 14.937 -26.981 -19.758 1 1 A GLU 0.600 1
ATOM 97 C CA . GLU 13 13 ? A 15.539 -27.486 -20.978 1 1 A GLU 0.600 1
ATOM 98 C C . GLU 13 13 ? A 16.419 -26.491 -21.716 1 1 A GLU 0.600 1
ATOM 99 O O . GLU 13 13 ? A 17.533 -26.816 -22.130 1 1 A GLU 0.600 1
ATOM 100 C CB . GLU 13 13 ? A 14.422 -27.988 -21.914 1 1 A GLU 0.600 1
ATOM 101 C CG . GLU 13 13 ? A 14.909 -28.603 -23.246 1 1 A GLU 0.600 1
ATOM 102 C CD . GLU 13 13 ? A 13.743 -28.987 -24.156 1 1 A GLU 0.600 1
ATOM 103 O OE1 . GLU 13 13 ? A 14.039 -29.503 -25.263 1 1 A GLU 0.600 1
ATOM 104 O OE2 . GLU 13 13 ? A 12.564 -28.758 -23.772 1 1 A GLU 0.600 1
ATOM 105 N N . GLN 14 14 ? A 15.953 -25.240 -21.845 1 1 A GLN 0.600 1
ATOM 106 C CA . GLN 14 14 ? A 16.650 -24.213 -22.584 1 1 A GLN 0.600 1
ATOM 107 C C . GLN 14 14 ? A 17.782 -23.552 -21.831 1 1 A GLN 0.600 1
ATOM 108 O O . GLN 14 14 ? A 18.943 -23.697 -22.213 1 1 A GLN 0.600 1
ATOM 109 C CB . GLN 14 14 ? A 15.631 -23.117 -22.940 1 1 A GLN 0.600 1
ATOM 110 C CG . GLN 14 14 ? A 14.571 -23.630 -23.931 1 1 A GLN 0.600 1
ATOM 111 C CD . GLN 14 14 ? A 13.534 -22.548 -24.198 1 1 A GLN 0.600 1
ATOM 112 O OE1 . GLN 14 14 ? A 13.271 -21.649 -23.401 1 1 A GLN 0.600 1
ATOM 113 N NE2 . GLN 14 14 ? A 12.909 -22.624 -25.395 1 1 A GLN 0.600 1
ATOM 114 N N . MET 15 15 ? A 17.473 -22.853 -20.720 1 1 A MET 0.560 1
ATOM 115 C CA . MET 15 15 ? A 18.450 -22.087 -19.976 1 1 A MET 0.560 1
ATOM 116 C C . MET 15 15 ? A 17.856 -21.465 -18.739 1 1 A MET 0.560 1
ATOM 117 O O . MET 15 15 ? A 16.848 -20.756 -18.768 1 1 A MET 0.560 1
ATOM 118 C CB . MET 15 15 ? A 19.203 -21.002 -20.799 1 1 A MET 0.560 1
ATOM 119 C CG . MET 15 15 ? A 20.398 -20.344 -20.071 1 1 A MET 0.560 1
ATOM 120 S SD . MET 15 15 ? A 21.316 -19.143 -21.084 1 1 A MET 0.560 1
ATOM 121 C CE . MET 15 15 ? A 22.082 -20.331 -22.225 1 1 A MET 0.560 1
ATOM 122 N N . ALA 16 16 ? A 18.498 -21.717 -17.581 1 1 A ALA 0.480 1
ATOM 123 C CA . ALA 16 16 ? A 18.157 -21.073 -16.337 1 1 A ALA 0.480 1
ATOM 124 C C . ALA 16 16 ? A 18.677 -19.639 -16.293 1 1 A ALA 0.480 1
ATOM 125 O O . ALA 16 16 ? A 19.648 -19.299 -15.625 1 1 A ALA 0.480 1
ATOM 126 C CB . ALA 16 16 ? A 18.687 -21.876 -15.148 1 1 A ALA 0.480 1
ATOM 127 N N . ASN 17 17 ? A 18.002 -18.730 -17.025 1 1 A ASN 0.450 1
ATOM 128 C CA . ASN 17 17 ? A 18.312 -17.306 -17.063 1 1 A ASN 0.450 1
ATOM 129 C C . ASN 17 17 ? A 18.235 -16.639 -15.700 1 1 A ASN 0.450 1
ATOM 130 O O . ASN 17 17 ? A 18.903 -15.647 -15.418 1 1 A ASN 0.450 1
ATOM 131 C CB . ASN 17 17 ? A 17.308 -16.550 -17.971 1 1 A ASN 0.450 1
ATOM 132 C CG . ASN 17 17 ? A 17.574 -16.873 -19.432 1 1 A ASN 0.450 1
ATOM 133 O OD1 . ASN 17 17 ? A 18.635 -17.349 -19.821 1 1 A ASN 0.450 1
ATOM 134 N ND2 . ASN 17 17 ? A 16.582 -16.569 -20.300 1 1 A ASN 0.450 1
ATOM 135 N N . CYS 18 18 ? A 17.374 -17.166 -14.820 1 1 A CYS 0.670 1
ATOM 136 C CA . CYS 18 18 ? A 17.253 -16.669 -13.476 1 1 A CYS 0.670 1
ATOM 137 C C . CYS 18 18 ? A 18.137 -17.490 -12.547 1 1 A CYS 0.670 1
ATOM 138 O O . CYS 18 18 ? A 17.929 -18.699 -12.479 1 1 A CYS 0.670 1
ATOM 139 C CB . CYS 18 18 ? A 15.785 -16.715 -13.024 1 1 A CYS 0.670 1
ATOM 140 S SG . CYS 18 18 ? A 14.883 -15.356 -13.856 1 1 A CYS 0.670 1
ATOM 141 N N . PRO 19 19 ? A 19.111 -16.907 -11.826 1 1 A PRO 0.620 1
ATOM 142 C CA . PRO 19 19 ? A 19.865 -17.577 -10.766 1 1 A PRO 0.620 1
ATOM 143 C C . PRO 19 19 ? A 19.007 -18.351 -9.788 1 1 A PRO 0.620 1
ATOM 144 O O . PRO 19 19 ? A 18.002 -17.770 -9.369 1 1 A PRO 0.620 1
ATOM 145 C CB . PRO 19 19 ? A 20.596 -16.444 -10.011 1 1 A PRO 0.620 1
ATOM 146 C CG . PRO 19 19 ? A 20.582 -15.232 -10.947 1 1 A PRO 0.620 1
ATOM 147 C CD . PRO 19 19 ? A 19.377 -15.469 -11.852 1 1 A PRO 0.620 1
ATOM 148 N N . LYS 20 20 ? A 19.440 -19.584 -9.414 1 1 A LYS 0.580 1
ATOM 149 C CA . LYS 20 20 ? A 18.876 -20.477 -8.404 1 1 A LYS 0.580 1
ATOM 150 C C . LYS 20 20 ? A 18.582 -21.854 -8.956 1 1 A LYS 0.580 1
ATOM 151 O O . LYS 20 20 ? A 17.721 -22.027 -9.810 1 1 A LYS 0.580 1
ATOM 152 C CB . LYS 20 20 ? A 17.574 -19.991 -7.752 1 1 A LYS 0.580 1
ATOM 153 C CG . LYS 20 20 ? A 16.938 -20.923 -6.731 1 1 A LYS 0.580 1
ATOM 154 C CD . LYS 20 20 ? A 15.661 -20.250 -6.242 1 1 A LYS 0.580 1
ATOM 155 C CE . LYS 20 20 ? A 14.944 -21.095 -5.209 1 1 A LYS 0.580 1
ATOM 156 N NZ . LYS 20 20 ? A 13.747 -20.366 -4.763 1 1 A LYS 0.580 1
ATOM 157 N N . PHE 21 21 ? A 19.267 -22.885 -8.427 1 1 A PHE 0.570 1
ATOM 158 C CA . PHE 21 21 ? A 19.254 -24.190 -9.052 1 1 A PHE 0.570 1
ATOM 159 C C . PHE 21 21 ? A 18.300 -25.071 -8.252 1 1 A PHE 0.570 1
ATOM 160 O O . PHE 21 21 ? A 18.343 -25.145 -7.020 1 1 A PHE 0.570 1
ATOM 161 C CB . PHE 21 21 ? A 20.676 -24.845 -9.169 1 1 A PHE 0.570 1
ATOM 162 C CG . PHE 21 21 ? A 21.730 -24.106 -10.007 1 1 A PHE 0.570 1
ATOM 163 C CD1 . PHE 21 21 ? A 21.870 -22.702 -10.105 1 1 A PHE 0.570 1
ATOM 164 C CD2 . PHE 21 21 ? A 22.666 -24.889 -10.715 1 1 A PHE 0.570 1
ATOM 165 C CE1 . PHE 21 21 ? A 22.858 -22.112 -10.902 1 1 A PHE 0.570 1
ATOM 166 C CE2 . PHE 21 21 ? A 23.665 -24.307 -11.507 1 1 A PHE 0.570 1
ATOM 167 C CZ . PHE 21 21 ? A 23.757 -22.915 -11.604 1 1 A PHE 0.570 1
ATOM 168 N N . VAL 22 22 ? A 17.355 -25.727 -8.945 1 1 A VAL 0.620 1
ATOM 169 C CA . VAL 22 22 ? A 16.325 -26.549 -8.331 1 1 A VAL 0.620 1
ATOM 170 C C . VAL 22 22 ? A 16.864 -27.966 -8.136 1 1 A VAL 0.620 1
ATOM 171 O O . VAL 22 22 ? A 17.638 -28.421 -8.974 1 1 A VAL 0.620 1
ATOM 172 C CB . VAL 22 22 ? A 15.032 -26.525 -9.154 1 1 A VAL 0.620 1
ATOM 173 C CG1 . VAL 22 22 ? A 13.914 -27.419 -8.576 1 1 A VAL 0.620 1
ATOM 174 C CG2 . VAL 22 22 ? A 14.524 -25.071 -9.176 1 1 A VAL 0.620 1
ATOM 175 N N . PRO 23 23 ? A 16.530 -28.724 -7.081 1 1 A PRO 0.600 1
ATOM 176 C CA . PRO 23 23 ? A 16.970 -30.110 -6.918 1 1 A PRO 0.600 1
ATOM 177 C C . PRO 23 23 ? A 16.583 -31.033 -8.060 1 1 A PRO 0.600 1
ATOM 178 O O . PRO 23 23 ? A 17.331 -31.944 -8.404 1 1 A PRO 0.600 1
ATOM 179 C CB . PRO 23 23 ? A 16.264 -30.564 -5.628 1 1 A PRO 0.600 1
ATOM 180 C CG . PRO 23 23 ? A 16.061 -29.291 -4.798 1 1 A PRO 0.600 1
ATOM 181 C CD . PRO 23 23 ? A 16.046 -28.154 -5.823 1 1 A PRO 0.600 1
ATOM 182 N N . VAL 24 24 ? A 15.382 -30.828 -8.630 1 1 A VAL 0.650 1
ATOM 183 C CA . VAL 24 24 ? A 14.864 -31.613 -9.731 1 1 A VAL 0.650 1
ATOM 184 C C . VAL 24 24 ? A 15.254 -30.946 -11.013 1 1 A VAL 0.650 1
ATOM 185 O O . VAL 24 24 ? A 14.669 -29.957 -11.452 1 1 A VAL 0.650 1
ATOM 186 C CB . VAL 24 24 ? A 13.353 -31.786 -9.726 1 1 A VAL 0.650 1
ATOM 187 C CG1 . VAL 24 24 ? A 12.916 -32.679 -10.913 1 1 A VAL 0.650 1
ATOM 188 C CG2 . VAL 24 24 ? A 12.952 -32.427 -8.388 1 1 A VAL 0.650 1
ATOM 189 N N . VAL 25 25 ? A 16.271 -31.520 -11.651 1 1 A VAL 0.700 1
ATOM 190 C CA . VAL 25 25 ? A 16.817 -31.016 -12.875 1 1 A VAL 0.700 1
ATOM 191 C C . VAL 25 25 ? A 16.464 -32.003 -13.975 1 1 A VAL 0.700 1
ATOM 192 O O . VAL 25 25 ? A 16.916 -33.148 -13.925 1 1 A VAL 0.700 1
ATOM 193 C CB . VAL 25 25 ? A 18.312 -30.855 -12.735 1 1 A VAL 0.700 1
ATOM 194 C CG1 . VAL 25 25 ? A 18.880 -30.378 -14.078 1 1 A VAL 0.700 1
ATOM 195 C CG2 . VAL 25 25 ? A 18.551 -29.857 -11.588 1 1 A VAL 0.700 1
ATOM 196 N N . PRO 26 26 ? A 15.660 -31.651 -14.974 1 1 A PRO 0.720 1
ATOM 197 C CA . PRO 26 26 ? A 15.270 -32.594 -16.018 1 1 A PRO 0.720 1
ATOM 198 C C . PRO 26 26 ? A 16.300 -32.649 -17.136 1 1 A PRO 0.720 1
ATOM 199 O O . PRO 26 26 ? A 16.208 -33.535 -17.979 1 1 A PRO 0.720 1
ATOM 200 C CB . PRO 26 26 ? A 13.920 -32.041 -16.517 1 1 A PRO 0.720 1
ATOM 201 C CG . PRO 26 26 ? A 13.962 -30.540 -16.207 1 1 A PRO 0.720 1
ATOM 202 C CD . PRO 26 26 ? A 14.816 -30.454 -14.949 1 1 A PRO 0.720 1
ATOM 203 N N . THR 27 27 ? A 17.242 -31.691 -17.215 1 1 A THR 0.700 1
ATOM 204 C CA . THR 27 27 ? A 18.109 -31.493 -18.375 1 1 A THR 0.700 1
ATOM 205 C C . THR 27 27 ? A 19.523 -31.194 -17.911 1 1 A THR 0.700 1
ATOM 206 O O . THR 27 27 ? A 19.882 -31.411 -16.766 1 1 A THR 0.700 1
ATOM 207 C CB . THR 27 27 ? A 17.610 -30.382 -19.291 1 1 A THR 0.700 1
ATOM 208 O OG1 . THR 27 27 ? A 17.486 -29.179 -18.542 1 1 A THR 0.700 1
ATOM 209 C CG2 . THR 27 27 ? A 16.227 -30.810 -19.813 1 1 A THR 0.700 1
ATOM 210 N N . SER 28 28 ? A 20.438 -30.735 -18.790 1 1 A SER 0.690 1
ATOM 211 C CA . SER 28 28 ? A 21.740 -30.231 -18.329 1 1 A SER 0.690 1
ATOM 212 C C . SER 28 28 ? A 21.787 -28.939 -17.519 1 1 A SER 0.690 1
ATOM 213 O O . SER 28 28 ? A 22.590 -28.941 -16.601 1 1 A SER 0.690 1
ATOM 214 C CB . SER 28 28 ? A 22.768 -30.050 -19.463 1 1 A SER 0.690 1
ATOM 215 O OG . SER 28 28 ? A 24.085 -29.775 -18.975 1 1 A SER 0.690 1
ATOM 216 N N . GLN 29 29 ? A 20.957 -27.894 -17.841 1 1 A GLN 0.510 1
ATOM 217 C CA . GLN 29 29 ? A 21.064 -26.457 -17.503 1 1 A GLN 0.510 1
ATOM 218 C C . GLN 29 29 ? A 21.300 -25.928 -16.076 1 1 A GLN 0.510 1
ATOM 219 O O . GLN 29 29 ? A 22.098 -24.971 -15.995 1 1 A GLN 0.510 1
ATOM 220 C CB . GLN 29 29 ? A 19.772 -25.777 -18.024 1 1 A GLN 0.510 1
ATOM 221 C CG . GLN 29 29 ? A 19.797 -25.474 -19.529 1 1 A GLN 0.510 1
ATOM 222 C CD . GLN 29 29 ? A 20.994 -24.566 -19.779 1 1 A GLN 0.510 1
ATOM 223 O OE1 . GLN 29 29 ? A 21.203 -23.556 -19.108 1 1 A GLN 0.510 1
ATOM 224 N NE2 . GLN 29 29 ? A 21.888 -24.970 -20.702 1 1 A GLN 0.510 1
ATOM 225 N N . PRO 30 30 ? A 20.772 -26.465 -14.979 1 1 A PRO 0.520 1
ATOM 226 C CA . PRO 30 30 ? A 19.748 -25.879 -14.059 1 1 A PRO 0.520 1
ATOM 227 C C . PRO 30 30 ? A 19.967 -24.523 -13.384 1 1 A PRO 0.520 1
ATOM 228 O O . PRO 30 30 ? A 20.784 -23.692 -13.840 1 1 A PRO 0.520 1
ATOM 229 C CB . PRO 30 30 ? A 19.662 -26.996 -12.976 1 1 A PRO 0.520 1
ATOM 230 C CG . PRO 30 30 ? A 21.007 -27.789 -12.945 1 1 A PRO 0.520 1
ATOM 231 C CD . PRO 30 30 ? A 21.591 -27.471 -14.324 1 1 A PRO 0.520 1
ATOM 232 O OXT . PRO 30 30 ? A 19.226 -24.286 -12.377 1 1 A PRO 0.520 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.595
2 1 3 0.122
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 1 MET 1 0.570
2 1 A 2 ARG 1 0.510
3 1 A 3 VAL 1 0.550
4 1 A 4 HIS 1 0.520
5 1 A 5 ILE 1 0.570
6 1 A 6 SER 1 0.580
7 1 A 7 SER 1 0.590
8 1 A 8 CYS 1 0.620
9 1 A 9 LEU 1 0.600
10 1 A 10 LYS 1 0.650
11 1 A 11 VAL 1 0.650
12 1 A 12 GLN 1 0.610
13 1 A 13 GLU 1 0.600
14 1 A 14 GLN 1 0.600
15 1 A 15 MET 1 0.560
16 1 A 16 ALA 1 0.480
17 1 A 17 ASN 1 0.450
18 1 A 18 CYS 1 0.670
19 1 A 19 PRO 1 0.620
20 1 A 20 LYS 1 0.580
21 1 A 21 PHE 1 0.570
22 1 A 22 VAL 1 0.620
23 1 A 23 PRO 1 0.600
24 1 A 24 VAL 1 0.650
25 1 A 25 VAL 1 0.700
26 1 A 26 PRO 1 0.720
27 1 A 27 THR 1 0.700
28 1 A 28 SER 1 0.690
29 1 A 29 GLN 1 0.510
30 1 A 30 PRO 1 0.520
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
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