data_SMR-14d73de35770cdc180ff527fea9b4393_2
_entry.id SMR-14d73de35770cdc180ff527fea9b4393_2
_struct.entry_id SMR-14d73de35770cdc180ff527fea9b4393_2
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - A2RSS9/ A2RSS9_MOUSE, Appetite-regulating hormone
  - Q9EQX0/ GHRL_MOUSE, Appetite-regulating hormone

Estimated model accuracy of this model is 0.1, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries A2RSS9, Q9EQX0'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 15314.007 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP GHRL_MOUSE Q9EQX0 1
;MLSSGTICSLLLLSMLWMDMAMAGSSFLSPEHQKAQQRKESKKPPAKLQPRALEGWLHPEDRGQAEETEE
ELEIRFNAPFDVGIKLSGAQYQQHGRALGKFLQDILWEEVKEAPADK
;
'Appetite-regulating hormone'
2 1 UNP A2RSS9_MOUSE A2RSS9 1
;MLSSGTICSLLLLSMLWMDMAMAGSSFLSPEHQKAQQRKESKKPPAKLQPRALEGWLHPEDRGQAEETEE
ELEIRFNAPFDVGIKLSGAQYQQHGRALGKFLQDILWEEVKEAPADK
;
'Appetite-regulating hormone'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 117 1 117
2 2 1 117 1 117
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . GHRL_MOUSE Q9EQX0 . 1 117 10090 'Mus musculus (Mouse)' 2001-03-01
EACB49D2E3CA7203
1 UNP . A2RSS9_MOUSE A2RSS9 . 1 117 10090 'Mus musculus (Mouse)' 2007-03-06
EACB49D2E3CA7203
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no C
;MLSSGTICSLLLLSMLWMDMAMAGSSFLSPEHQKAQQRKESKKPPAKLQPRALEGWLHPEDRGQAEETEE
ELEIRFNAPFDVGIKLSGAQYQQHGRALGKFLQDILWEEVKEAPADK
;

;MLSSGTICSLLLLSMLWMDMAMAGSSFLSPEHQKAQQRKESKKPPAKLQPRALEGWLHPEDRGQAEETEE
ELEIRFNAPFDVGIKLSGAQYQQHGRALGKFLQDILWEEVKEAPADK
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 LEU .
1 3 SER .
1 4 SER .
1 5 GLY .
1 6 THR .
1 7 ILE .
1 8 CYS .
1 9 SER .
1 10 LEU .
1 11 LEU .
1 12 LEU .
1 13 LEU .
1 14 SER .
1 15 MET .
1 16 LEU .
1 17 TRP .
1 18 MET .
1 19 ASP .
1 20 MET .
1 21 ALA .
1 22 MET .
1 23 ALA .
1 24 GLY .
1 25 SER .
1 26 SER .
1 27 PHE .
1 28 LEU .
1 29 SER .
1 30 PRO .
1 31 GLU .
1 32 HIS .
1 33 GLN .
1 34 LYS .
1 35 ALA .
1 36 GLN .
1 37 GLN .
1 38 ARG .
1 39 LYS .
1 40 GLU .
1 41 SER .
1 42 LYS .
1 43 LYS .
1 44 PRO .
1 45 PRO .
1 46 ALA .
1 47 LYS .
1 48 LEU .
1 49 GLN .
1 50 PRO .
1 51 ARG .
1 52 ALA .
1 53 LEU .
1 54 GLU .
1 55 GLY .
1 56 TRP .
1 57 LEU .
1 58 HIS .
1 59 PRO .
1 60 GLU .
1 61 ASP .
1 62 ARG .
1 63 GLY .
1 64 GLN .
1 65 ALA .
1 66 GLU .
1 67 GLU .
1 68 THR .
1 69 GLU .
1 70 GLU .
1 71 GLU .
1 72 LEU .
1 73 GLU .
1 74 ILE .
1 75 ARG .
1 76 PHE .
1 77 ASN .
1 78 ALA .
1 79 PRO .
1 80 PHE .
1 81 ASP .
1 82 VAL .
1 83 GLY .
1 84 ILE .
1 85 LYS .
1 86 LEU .
1 87 SER .
1 88 GLY .
1 89 ALA .
1 90 GLN .
1 91 TYR .
1 92 GLN .
1 93 GLN .
1 94 HIS .
1 95 GLY .
1 96 ARG .
1 97 ALA .
1 98 LEU .
1 99 GLY .
1 100 LYS .
1 101 PHE .
1 102 LEU .
1 103 GLN .
1 104 ASP .
1 105 ILE .
1 106 LEU .
1 107 TRP .
1 108 GLU .
1 109 GLU .
1 110 VAL .
1 111 LYS .
1 112 GLU .
1 113 ALA .
1 114 PRO .
1 115 ALA .
1 116 ASP .
1 117 LYS .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? C .
A 1 2 LEU 2 ? ? ? C .
A 1 3 SER 3 ? ? ? C .
A 1 4 SER 4 ? ? ? C .
A 1 5 GLY 5 ? ? ? C .
A 1 6 THR 6 ? ? ? C .
A 1 7 ILE 7 ? ? ? C .
A 1 8 CYS 8 ? ? ? C .
A 1 9 SER 9 ? ? ? C .
A 1 10 LEU 10 ? ? ? C .
A 1 11 LEU 11 ? ? ? C .
A 1 12 LEU 12 ? ? ? C .
A 1 13 LEU 13 ? ? ? C .
A 1 14 SER 14 ? ? ? C .
A 1 15 MET 15 ? ? ? C .
A 1 16 LEU 16 ? ? ? C .
A 1 17 TRP 17 ? ? ? C .
A 1 18 MET 18 ? ? ? C .
A 1 19 ASP 19 ? ? ? C .
A 1 20 MET 20 ? ? ? C .
A 1 21 ALA 21 ? ? ? C .
A 1 22 MET 22 ? ? ? C .
A 1 23 ALA 23 ? ? ? C .
A 1 24 GLY 24 24 GLY GLY C .
A 1 25 SER 25 25 SER SER C .
A 1 26 SER 26 26 SER SER C .
A 1 27 PHE 27 27 PHE PHE C .
A 1 28 LEU 28 28 LEU LEU C .
A 1 29 SER 29 29 SER SER C .
A 1 30 PRO 30 30 PRO PRO C .
A 1 31 GLU 31 31 GLU GLU C .
A 1 32 HIS 32 32 HIS HIS C .
A 1 33 GLN 33 33 GLN GLN C .
A 1 34 LYS 34 34 LYS LYS C .
A 1 35 ALA 35 35 ALA ALA C .
A 1 36 GLN 36 36 GLN GLN C .
A 1 37 GLN 37 37 GLN GLN C .
A 1 38 ARG 38 38 ARG ARG C .
A 1 39 LYS 39 ? ? ? C .
A 1 40 GLU 40 ? ? ? C .
A 1 41 SER 41 ? ? ? C .
A 1 42 LYS 42 ? ? ? C .
A 1 43 LYS 43 ? ? ? C .
A 1 44 PRO 44 ? ? ? C .
A 1 45 PRO 45 ? ? ? C .
A 1 46 ALA 46 ? ? ? C .
A 1 47 LYS 47 ? ? ? C .
A 1 48 LEU 48 ? ? ? C .
A 1 49 GLN 49 ? ? ? C .
A 1 50 PRO 50 ? ? ? C .
A 1 51 ARG 51 ? ? ? C .
A 1 52 ALA 52 ? ? ? C .
A 1 53 LEU 53 ? ? ? C .
A 1 54 GLU 54 ? ? ? C .
A 1 55 GLY 55 ? ? ? C .
A 1 56 TRP 56 ? ? ? C .
A 1 57 LEU 57 ? ? ? C .
A 1 58 HIS 58 ? ? ? C .
A 1 59 PRO 59 ? ? ? C .
A 1 60 GLU 60 ? ? ? C .
A 1 61 ASP 61 ? ? ? C .
A 1 62 ARG 62 ? ? ? C .
A 1 63 GLY 63 ? ? ? C .
A 1 64 GLN 64 ? ? ? C .
A 1 65 ALA 65 ? ? ? C .
A 1 66 GLU 66 ? ? ? C .
A 1 67 GLU 67 ? ? ? C .
A 1 68 THR 68 ? ? ? C .
A 1 69 GLU 69 ? ? ? C .
A 1 70 GLU 70 ? ? ? C .
A 1 71 GLU 71 ? ? ? C .
A 1 72 LEU 72 ? ? ? C .
A 1 73 GLU 73 ? ? ? C .
A 1 74 ILE 74 ? ? ? C .
A 1 75 ARG 75 ? ? ? C .
A 1 76 PHE 76 ? ? ? C .
A 1 77 ASN 77 ? ? ? C .
A 1 78 ALA 78 ? ? ? C .
A 1 79 PRO 79 ? ? ? C .
A 1 80 PHE 80 ? ? ? C .
A 1 81 ASP 81 ? ? ? C .
A 1 82 VAL 82 ? ? ? C .
A 1 83 GLY 83 ? ? ? C .
A 1 84 ILE 84 ? ? ? C .
A 1 85 LYS 85 ? ? ? C .
A 1 86 LEU 86 ? ? ? C .
A 1 87 SER 87 ? ? ? C .
A 1 88 GLY 88 ? ? ? C .
A 1 89 ALA 89 ? ? ? C .
A 1 90 GLN 90 ? ? ? C .
A 1 91 TYR 91 ? ? ? C .
A 1 92 GLN 92 ? ? ? C .
A 1 93 GLN 93 ? ? ? C .
A 1 94 HIS 94 ? ? ? C .
A 1 95 GLY 95 ? ? ? C .
A 1 96 ARG 96 ? ? ? C .
A 1 97 ALA 97 ? ? ? C .
A 1 98 LEU 98 ? ? ? C .
A 1 99 GLY 99 ? ? ? C .
A 1 100 LYS 100 ? ? ? C .
A 1 101 PHE 101 ? ? ? C .
A 1 102 LEU 102 ? ? ? C .
A 1 103 GLN 103 ? ? ? C .
A 1 104 ASP 104 ? ? ? C .
A 1 105 ILE 105 ? ? ? C .
A 1 106 LEU 106 ? ? ? C .
A 1 107 TRP 107 ? ? ? C .
A 1 108 GLU 108 ? ? ? C .
A 1 109 GLU 109 ? ? ? C .
A 1 110 VAL 110 ? ? ? C .
A 1 111 LYS 111 ? ? ? C .
A 1 112 GLU 112 ? ? ? C .
A 1 113 ALA 113 ? ? ? C .
A 1 114 PRO 114 ? ? ? C .
A 1 115 ALA 115 ? ? ? C .
A 1 116 ASP 116 ? ? ? C .
A 1 117 LYS 117 ? ? ? C .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1 'Ghrelin-28 {PDB ID=7f9y, label_asym_id=C, auth_asym_id=C, SMTL ID=7f9y.1.C}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 7f9y, label_asym_id=C'
'target-template alignment' .
4 'model 2' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-11-14
6 PDB https://www.wwpdb.org . 2024-11-08
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A C 3 1 C
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 GSSFLSPEHQRVQQRKESKKPPAKLQPR GSSFLSPEHQRVQQRKESKKPPAKLQPR
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 1 28
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 7f9y 2024-10-30
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 117
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 117 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 4e-15 92.857
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MLSSGTICSLLLLSMLWMDMAMAGSSFLSPEHQKAQQRKESKKPPAKLQPRALEGWLHPEDRGQAEETEEELEIRFNAPFDVGIKLSGAQYQQHGRALGKFLQDILWEEVKEAPADK
2 1 2
-----------------------GSSFLSPEHQRVQQRKESKKPPAKLQPR------------------------------------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 7f9y.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 2' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLY 24 24 ? A 116.688 92.387 122.713 1 1 C GLY 0.650 1
ATOM 2 C CA . GLY 24 24 ? A 115.779 91.884 121.612 1 1 C GLY 0.650 1
ATOM 3 C C . GLY 24 24 ? A 115.171 90.567 121.987 1 1 C GLY 0.650 1
ATOM 4 O O . GLY 24 24 ? A 114.370 90.539 122.908 1 1 C GLY 0.650 1
ATOM 5 N N . SER 25 25 ? A 115.549 89.456 121.318 1 1 C SER 0.710 1
ATOM 6 C CA . SER 25 25 ? A 115.144 88.099 121.655 1 1 C SER 0.710 1
ATOM 7 C C . SER 25 25 ? A 115.765 87.605 122.953 1 1 C SER 0.710 1
ATOM 8 O O . SER 25 25 ? A 116.770 88.137 123.428 1 1 C SER 0.710 1
ATOM 9 C CB . SER 25 25 ? A 115.481 87.112 120.496 1 1 C SER 0.710 1
ATOM 10 O OG . SER 25 25 ? A 116.837 87.264 120.068 1 1 C SER 0.710 1
ATOM 11 N N . SER 26 26 ? A 115.137 86.584 123.568 1 1 C SER 0.710 1
ATOM 12 C CA . SER 26 26 ? A 115.545 86.013 124.840 1 1 C SER 0.710 1
ATOM 13 C C . SER 26 26 ? A 115.948 84.587 124.589 1 1 C SER 0.710 1
ATOM 14 O O . SER 26 26 ? A 115.190 83.812 124.008 1 1 C SER 0.710 1
ATOM 15 C CB . SER 26 26 ? A 114.402 85.985 125.888 1 1 C SER 0.710 1
ATOM 16 O OG . SER 26 26 ? A 114.090 87.323 126.272 1 1 C SER 0.710 1
ATOM 17 N N . PHE 27 27 ? A 117.169 84.215 125.011 1 1 C PHE 0.710 1
ATOM 18 C CA . PHE 27 27 ? A 117.746 82.901 124.799 1 1 C PHE 0.710 1
ATOM 19 C C . PHE 27 27 ? A 117.668 82.097 126.079 1 1 C PHE 0.710 1
ATOM 20 O O . PHE 27 27 ? A 117.504 82.637 127.172 1 1 C PHE 0.710 1
ATOM 21 C CB . PHE 27 27 ? A 119.241 82.974 124.368 1 1 C PHE 0.710 1
ATOM 22 C CG . PHE 27 27 ? A 119.345 83.574 122.992 1 1 C PHE 0.710 1
ATOM 23 C CD1 . PHE 27 27 ? A 119.251 82.752 121.854 1 1 C PHE 0.710 1
ATOM 24 C CD2 . PHE 27 27 ? A 119.542 84.956 122.818 1 1 C PHE 0.710 1
ATOM 25 C CE1 . PHE 27 27 ? A 119.381 83.296 120.568 1 1 C PHE 0.710 1
ATOM 26 C CE2 . PHE 27 27 ? A 119.664 85.504 121.533 1 1 C PHE 0.710 1
ATOM 27 C CZ . PHE 27 27 ? A 119.592 84.673 120.407 1 1 C PHE 0.710 1
ATOM 28 N N . LEU 28 28 ? A 117.794 80.762 125.961 1 1 C LEU 0.720 1
ATOM 29 C CA . LEU 28 28 ? A 117.860 79.864 127.094 1 1 C LEU 0.720 1
ATOM 30 C C . LEU 28 28 ? A 119.299 79.611 127.487 1 1 C LEU 0.720 1
ATOM 31 O O . LEU 28 28 ? A 120.193 79.493 126.650 1 1 C LEU 0.720 1
ATOM 32 C CB . LEU 28 28 ? A 117.165 78.501 126.820 1 1 C LEU 0.720 1
ATOM 33 C CG . LEU 28 28 ? A 115.644 78.483 127.104 1 1 C LEU 0.720 1
ATOM 34 C CD1 . LEU 28 28 ? A 115.154 77.031 126.977 1 1 C LEU 0.720 1
ATOM 35 C CD2 . LEU 28 28 ? A 115.267 79.015 128.506 1 1 C LEU 0.720 1
ATOM 36 N N . SER 29 29 ? A 119.552 79.547 128.809 1 1 C SER 0.730 1
ATOM 37 C CA . SER 29 29 ? A 120.841 79.204 129.390 1 1 C SER 0.730 1
ATOM 38 C C . SER 29 29 ? A 121.263 77.764 129.102 1 1 C SER 0.730 1
ATOM 39 O O . SER 29 29 ? A 120.391 76.898 129.145 1 1 C SER 0.730 1
ATOM 40 C CB . SER 29 29 ? A 120.871 79.365 130.936 1 1 C SER 0.730 1
ATOM 41 O OG . SER 29 29 ? A 120.367 80.652 131.288 1 1 C SER 0.730 1
ATOM 42 N N . PRO 30 30 ? A 122.530 77.395 128.873 1 1 C PRO 0.910 1
ATOM 43 C CA . PRO 30 30 ? A 122.941 76.011 128.598 1 1 C PRO 0.910 1
ATOM 44 C C . PRO 30 30 ? A 122.661 75.047 129.754 1 1 C PRO 0.910 1
ATOM 45 O O . PRO 30 30 ? A 122.500 73.859 129.527 1 1 C PRO 0.910 1
ATOM 46 C CB . PRO 30 30 ? A 124.457 76.091 128.303 1 1 C PRO 0.910 1
ATOM 47 C CG . PRO 30 30 ? A 124.733 77.575 128.000 1 1 C PRO 0.910 1
ATOM 48 C CD . PRO 30 30 ? A 123.645 78.332 128.769 1 1 C PRO 0.910 1
ATOM 49 N N . GLU 31 31 ? A 122.629 75.574 131.002 1 1 C GLU 0.750 1
ATOM 50 C CA . GLU 31 31 ? A 122.408 74.840 132.242 1 1 C GLU 0.750 1
ATOM 51 C C . GLU 31 31 ? A 120.906 74.783 132.586 1 1 C GLU 0.750 1
ATOM 52 O O . GLU 31 31 ? A 120.462 74.229 133.593 1 1 C GLU 0.750 1
ATOM 53 C CB . GLU 31 31 ? A 123.199 75.573 133.379 1 1 C GLU 0.750 1
ATOM 54 C CG . GLU 31 31 ? A 123.224 74.858 134.763 1 1 C GLU 0.750 1
ATOM 55 C CD . GLU 31 31 ? A 123.852 73.465 134.689 1 1 C GLU 0.750 1
ATOM 56 O OE1 . GLU 31 31 ? A 124.649 73.214 133.751 1 1 C GLU 0.750 1
ATOM 57 O OE2 . GLU 31 31 ? A 123.526 72.641 135.578 1 1 C GLU 0.750 1
ATOM 58 N N . HIS 32 32 ? A 120.020 75.333 131.717 1 1 C HIS 0.910 1
ATOM 59 C CA . HIS 32 32 ? A 118.580 75.434 131.959 1 1 C HIS 0.910 1
ATOM 60 C C . HIS 32 32 ? A 117.888 74.091 132.191 1 1 C HIS 0.910 1
ATOM 61 O O . HIS 32 32 ? A 116.950 73.991 132.980 1 1 C HIS 0.910 1
ATOM 62 C CB . HIS 32 32 ? A 117.862 76.173 130.809 1 1 C HIS 0.910 1
ATOM 63 C CG . HIS 32 32 ? A 116.430 76.471 131.109 1 1 C HIS 0.910 1
ATOM 64 N ND1 . HIS 32 32 ? A 115.452 75.753 130.455 1 1 C HIS 0.910 1
ATOM 65 C CD2 . HIS 32 32 ? A 115.872 77.403 131.920 1 1 C HIS 0.910 1
ATOM 66 C CE1 . HIS 32 32 ? A 114.316 76.262 130.870 1 1 C HIS 0.910 1
ATOM 67 N NE2 . HIS 32 32 ? A 114.507 77.270 131.762 1 1 C HIS 0.910 1
ATOM 68 N N . GLN 33 33 ? A 118.399 73.025 131.537 1 1 C GLN 0.650 1
ATOM 69 C CA . GLN 33 33 ? A 118.021 71.629 131.702 1 1 C GLN 0.650 1
ATOM 70 C C . GLN 33 33 ? A 118.146 71.101 133.132 1 1 C GLN 0.650 1
ATOM 71 O O . GLN 33 33 ? A 117.353 70.258 133.543 1 1 C GLN 0.650 1
ATOM 72 C CB . GLN 33 33 ? A 118.852 70.712 130.745 1 1 C GLN 0.650 1
ATOM 73 C CG . GLN 33 33 ? A 118.269 70.633 129.305 1 1 C GLN 0.650 1
ATOM 74 C CD . GLN 33 33 ? A 118.388 71.955 128.537 1 1 C GLN 0.650 1
ATOM 75 O OE1 . GLN 33 33 ? A 119.291 72.753 128.744 1 1 C GLN 0.650 1
ATOM 76 N NE2 . GLN 33 33 ? A 117.429 72.206 127.611 1 1 C GLN 0.650 1
ATOM 77 N N . LYS 34 34 ? A 119.148 71.549 133.922 1 1 C LYS 0.800 1
ATOM 78 C CA . LYS 34 34 ? A 119.358 71.042 135.267 1 1 C LYS 0.800 1
ATOM 79 C C . LYS 34 34 ? A 119.051 72.052 136.354 1 1 C LYS 0.800 1
ATOM 80 O O . LYS 34 34 ? A 118.874 71.667 137.502 1 1 C LYS 0.800 1
ATOM 81 C CB . LYS 34 34 ? A 120.821 70.580 135.434 1 1 C LYS 0.800 1
ATOM 82 C CG . LYS 34 34 ? A 121.236 69.469 134.456 1 1 C LYS 0.800 1
ATOM 83 C CD . LYS 34 34 ? A 120.444 68.168 134.663 1 1 C LYS 0.800 1
ATOM 84 C CE . LYS 34 34 ? A 120.923 67.054 133.737 1 1 C LYS 0.800 1
ATOM 85 N NZ . LYS 34 34 ? A 120.077 65.865 133.959 1 1 C LYS 0.800 1
ATOM 86 N N . ALA 35 35 ? A 118.855 73.355 136.049 1 1 C ALA 0.780 1
ATOM 87 C CA . ALA 35 35 ? A 118.510 74.335 137.075 1 1 C ALA 0.780 1
ATOM 88 C C . ALA 35 35 ? A 117.116 74.112 137.673 1 1 C ALA 0.780 1
ATOM 89 O O . ALA 35 35 ? A 116.790 74.547 138.774 1 1 C ALA 0.780 1
ATOM 90 C CB . ALA 35 35 ? A 118.580 75.760 136.485 1 1 C ALA 0.780 1
ATOM 91 N N . GLN 36 36 ? A 116.274 73.336 136.956 1 1 C GLN 0.650 1
ATOM 92 C CA . GLN 36 36 ? A 114.983 72.870 137.415 1 1 C GLN 0.650 1
ATOM 93 C C . GLN 36 36 ? A 115.096 71.782 138.481 1 1 C GLN 0.650 1
ATOM 94 O O . GLN 36 36 ? A 114.127 71.444 139.129 1 1 C GLN 0.650 1
ATOM 95 C CB . GLN 36 36 ? A 114.077 72.329 136.264 1 1 C GLN 0.650 1
ATOM 96 C CG . GLN 36 36 ? A 114.205 73.075 134.914 1 1 C GLN 0.650 1
ATOM 97 C CD . GLN 36 36 ? A 113.993 74.583 135.052 1 1 C GLN 0.650 1
ATOM 98 O OE1 . GLN 36 36 ? A 113.322 75.102 135.938 1 1 C GLN 0.650 1
ATOM 99 N NE2 . GLN 36 36 ? A 114.608 75.328 134.108 1 1 C GLN 0.650 1
ATOM 100 N N . GLN 37 37 ? A 116.307 71.204 138.683 1 1 C GLN 0.620 1
ATOM 101 C CA . GLN 37 37 ? A 116.513 70.149 139.642 1 1 C GLN 0.620 1
ATOM 102 C C . GLN 37 37 ? A 116.759 70.713 141.045 1 1 C GLN 0.620 1
ATOM 103 O O . GLN 37 37 ? A 116.683 69.958 142.006 1 1 C GLN 0.620 1
ATOM 104 C CB . GLN 37 37 ? A 117.680 69.247 139.146 1 1 C GLN 0.620 1
ATOM 105 C CG . GLN 37 37 ? A 117.821 67.926 139.933 1 1 C GLN 0.620 1
ATOM 106 C CD . GLN 37 37 ? A 118.825 66.958 139.304 1 1 C GLN 0.620 1
ATOM 107 O OE1 . GLN 37 37 ? A 119.409 67.123 138.237 1 1 C GLN 0.620 1
ATOM 108 N NE2 . GLN 37 37 ? A 119.004 65.822 140.025 1 1 C GLN 0.620 1
ATOM 109 N N . ARG 38 38 ? A 116.944 72.058 141.167 1 1 C ARG 0.520 1
ATOM 110 C CA . ARG 38 38 ? A 117.214 72.777 142.411 1 1 C ARG 0.520 1
ATOM 111 C C . ARG 38 38 ? A 118.694 72.667 142.874 1 1 C ARG 0.520 1
ATOM 112 O O . ARG 38 38 ? A 119.537 72.078 142.148 1 1 C ARG 0.520 1
ATOM 113 C CB . ARG 38 38 ? A 116.203 72.512 143.586 1 1 C ARG 0.520 1
ATOM 114 C CG . ARG 38 38 ? A 114.774 73.111 143.443 1 1 C ARG 0.520 1
ATOM 115 C CD . ARG 38 38 ? A 113.973 72.617 142.223 1 1 C ARG 0.520 1
ATOM 116 N NE . ARG 38 38 ? A 112.527 73.023 142.405 1 1 C ARG 0.520 1
ATOM 117 C CZ . ARG 38 38 ? A 111.565 72.754 141.509 1 1 C ARG 0.520 1
ATOM 118 N NH1 . ARG 38 38 ? A 110.303 73.139 141.731 1 1 C ARG 0.520 1
ATOM 119 N NH2 . ARG 38 38 ? A 111.809 72.124 140.373 1 1 C ARG 0.520 1
ATOM 120 O OXT . ARG 38 38 ? A 118.997 73.257 143.947 1 1 C ARG 0.520 1
#
#
loop_
_atom_type.symbol
C
N
O
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.721
2 1 3 0.100
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 24 GLY 1 0.650
2 1 A 25 SER 1 0.710
3 1 A 26 SER 1 0.710
4 1 A 27 PHE 1 0.710
5 1 A 28 LEU 1 0.720
6 1 A 29 SER 1 0.730
7 1 A 30 PRO 1 0.910
8 1 A 31 GLU 1 0.750
9 1 A 32 HIS 1 0.910
10 1 A 33 GLN 1 0.650
11 1 A 34 LYS 1 0.800
12 1 A 35 ALA 1 0.780
13 1 A 36 GLN 1 0.650
14 1 A 37 GLN 1 0.620
15 1 A 38 ARG 1 0.520
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
;This SWISS-MODEL protein model is copyright.
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2 disclaimer
;The SWISS-MODEL SERVER produces theoretical models for
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#