data_SMR-5819f119ec6865409ed5189906849f11_2 _entry.id SMR-5819f119ec6865409ed5189906849f11_2 _struct.entry_id SMR-5819f119ec6865409ed5189906849f11_2 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - O00559 (isoform 2)/ RCAS1_HUMAN, Receptor-binding cancer antigen expressed on SiSo cells Estimated model accuracy of this model is 0.024, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries O00559 (isoform 2)' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 34136.573 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP RCAS1_HUMAN O00559 1 ;MAITQFRLFKFCTCLATVFSFLKRLICRSGRGRKLSGDQITLPTTVDYSSVPKQTDVEEWTSWDEDAPTS VKIEGGNGNVATQQNSLEQLEPDYFKDMTPTIRKTQKIVIKKREPLNFGIPDGSTGFSSRLAATQDLPFI HQSSELGDLDTWQENTNAWEEEEDAAWQAEEVLRSRTNVCLLCSLLFHHPTPTSTPYINQSVKIERVSLG QWSYGKSKEQQKLADREKRAAEQQRKKMEKEAQRLMKKEQNKIGVKLS ; 'Receptor-binding cancer antigen expressed on SiSo cells' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 258 1 258 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . RCAS1_HUMAN O00559 O00559-2 1 258 9606 'Homo sapiens (Human)' 1997-07-01 98ECCBCEA9BA1B9C # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no D ;MAITQFRLFKFCTCLATVFSFLKRLICRSGRGRKLSGDQITLPTTVDYSSVPKQTDVEEWTSWDEDAPTS VKIEGGNGNVATQQNSLEQLEPDYFKDMTPTIRKTQKIVIKKREPLNFGIPDGSTGFSSRLAATQDLPFI HQSSELGDLDTWQENTNAWEEEEDAAWQAEEVLRSRTNVCLLCSLLFHHPTPTSTPYINQSVKIERVSLG QWSYGKSKEQQKLADREKRAAEQQRKKMEKEAQRLMKKEQNKIGVKLS ; ;MAITQFRLFKFCTCLATVFSFLKRLICRSGRGRKLSGDQITLPTTVDYSSVPKQTDVEEWTSWDEDAPTS VKIEGGNGNVATQQNSLEQLEPDYFKDMTPTIRKTQKIVIKKREPLNFGIPDGSTGFSSRLAATQDLPFI HQSSELGDLDTWQENTNAWEEEEDAAWQAEEVLRSRTNVCLLCSLLFHHPTPTSTPYINQSVKIERVSLG QWSYGKSKEQQKLADREKRAAEQQRKKMEKEAQRLMKKEQNKIGVKLS ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 ALA . 1 3 ILE . 1 4 THR . 1 5 GLN . 1 6 PHE . 1 7 ARG . 1 8 LEU . 1 9 PHE . 1 10 LYS . 1 11 PHE . 1 12 CYS . 1 13 THR . 1 14 CYS . 1 15 LEU . 1 16 ALA . 1 17 THR . 1 18 VAL . 1 19 PHE . 1 20 SER . 1 21 PHE . 1 22 LEU . 1 23 LYS . 1 24 ARG . 1 25 LEU . 1 26 ILE . 1 27 CYS . 1 28 ARG . 1 29 SER . 1 30 GLY . 1 31 ARG . 1 32 GLY . 1 33 ARG . 1 34 LYS . 1 35 LEU . 1 36 SER . 1 37 GLY . 1 38 ASP . 1 39 GLN . 1 40 ILE . 1 41 THR . 1 42 LEU . 1 43 PRO . 1 44 THR . 1 45 THR . 1 46 VAL . 1 47 ASP . 1 48 TYR . 1 49 SER . 1 50 SER . 1 51 VAL . 1 52 PRO . 1 53 LYS . 1 54 GLN . 1 55 THR . 1 56 ASP . 1 57 VAL . 1 58 GLU . 1 59 GLU . 1 60 TRP . 1 61 THR . 1 62 SER . 1 63 TRP . 1 64 ASP . 1 65 GLU . 1 66 ASP . 1 67 ALA . 1 68 PRO . 1 69 THR . 1 70 SER . 1 71 VAL . 1 72 LYS . 1 73 ILE . 1 74 GLU . 1 75 GLY . 1 76 GLY . 1 77 ASN . 1 78 GLY . 1 79 ASN . 1 80 VAL . 1 81 ALA . 1 82 THR . 1 83 GLN . 1 84 GLN . 1 85 ASN . 1 86 SER . 1 87 LEU . 1 88 GLU . 1 89 GLN . 1 90 LEU . 1 91 GLU . 1 92 PRO . 1 93 ASP . 1 94 TYR . 1 95 PHE . 1 96 LYS . 1 97 ASP . 1 98 MET . 1 99 THR . 1 100 PRO . 1 101 THR . 1 102 ILE . 1 103 ARG . 1 104 LYS . 1 105 THR . 1 106 GLN . 1 107 LYS . 1 108 ILE . 1 109 VAL . 1 110 ILE . 1 111 LYS . 1 112 LYS . 1 113 ARG . 1 114 GLU . 1 115 PRO . 1 116 LEU . 1 117 ASN . 1 118 PHE . 1 119 GLY . 1 120 ILE . 1 121 PRO . 1 122 ASP . 1 123 GLY . 1 124 SER . 1 125 THR . 1 126 GLY . 1 127 PHE . 1 128 SER . 1 129 SER . 1 130 ARG . 1 131 LEU . 1 132 ALA . 1 133 ALA . 1 134 THR . 1 135 GLN . 1 136 ASP . 1 137 LEU . 1 138 PRO . 1 139 PHE . 1 140 ILE . 1 141 HIS . 1 142 GLN . 1 143 SER . 1 144 SER . 1 145 GLU . 1 146 LEU . 1 147 GLY . 1 148 ASP . 1 149 LEU . 1 150 ASP . 1 151 THR . 1 152 TRP . 1 153 GLN . 1 154 GLU . 1 155 ASN . 1 156 THR . 1 157 ASN . 1 158 ALA . 1 159 TRP . 1 160 GLU . 1 161 GLU . 1 162 GLU . 1 163 GLU . 1 164 ASP . 1 165 ALA . 1 166 ALA . 1 167 TRP . 1 168 GLN . 1 169 ALA . 1 170 GLU . 1 171 GLU . 1 172 VAL . 1 173 LEU . 1 174 ARG . 1 175 SER . 1 176 ARG . 1 177 THR . 1 178 ASN . 1 179 VAL . 1 180 CYS . 1 181 LEU . 1 182 LEU . 1 183 CYS . 1 184 SER . 1 185 LEU . 1 186 LEU . 1 187 PHE . 1 188 HIS . 1 189 HIS . 1 190 PRO . 1 191 THR . 1 192 PRO . 1 193 THR . 1 194 SER . 1 195 THR . 1 196 PRO . 1 197 TYR . 1 198 ILE . 1 199 ASN . 1 200 GLN . 1 201 SER . 1 202 VAL . 1 203 LYS . 1 204 ILE . 1 205 GLU . 1 206 ARG . 1 207 VAL . 1 208 SER . 1 209 LEU . 1 210 GLY . 1 211 GLN . 1 212 TRP . 1 213 SER . 1 214 TYR . 1 215 GLY . 1 216 LYS . 1 217 SER . 1 218 LYS . 1 219 GLU . 1 220 GLN . 1 221 GLN . 1 222 LYS . 1 223 LEU . 1 224 ALA . 1 225 ASP . 1 226 ARG . 1 227 GLU . 1 228 LYS . 1 229 ARG . 1 230 ALA . 1 231 ALA . 1 232 GLU . 1 233 GLN . 1 234 GLN . 1 235 ARG . 1 236 LYS . 1 237 LYS . 1 238 MET . 1 239 GLU . 1 240 LYS . 1 241 GLU . 1 242 ALA . 1 243 GLN . 1 244 ARG . 1 245 LEU . 1 246 MET . 1 247 LYS . 1 248 LYS . 1 249 GLU . 1 250 GLN . 1 251 ASN . 1 252 LYS . 1 253 ILE . 1 254 GLY . 1 255 VAL . 1 256 LYS . 1 257 LEU . 1 258 SER . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? D . A 1 2 ALA 2 ? ? ? D . A 1 3 ILE 3 3 ILE ILE D . A 1 4 THR 4 4 THR THR D . A 1 5 GLN 5 5 GLN GLN D . A 1 6 PHE 6 6 PHE PHE D . A 1 7 ARG 7 7 ARG ARG D . A 1 8 LEU 8 8 LEU LEU D . A 1 9 PHE 9 9 PHE PHE D . A 1 10 LYS 10 10 LYS LYS D . A 1 11 PHE 11 11 PHE PHE D . A 1 12 CYS 12 12 CYS CYS D . A 1 13 THR 13 13 THR THR D . A 1 14 CYS 14 14 CYS CYS D . A 1 15 LEU 15 15 LEU LEU D . A 1 16 ALA 16 16 ALA ALA D . A 1 17 THR 17 17 THR THR D . A 1 18 VAL 18 18 VAL VAL D . A 1 19 PHE 19 19 PHE PHE D . A 1 20 SER 20 20 SER SER D . A 1 21 PHE 21 21 PHE PHE D . A 1 22 LEU 22 22 LEU LEU D . A 1 23 LYS 23 23 LYS LYS D . A 1 24 ARG 24 24 ARG ARG D . A 1 25 LEU 25 25 LEU LEU D . A 1 26 ILE 26 26 ILE ILE D . A 1 27 CYS 27 27 CYS CYS D . A 1 28 ARG 28 28 ARG ARG D . A 1 29 SER 29 29 SER SER D . A 1 30 GLY 30 30 GLY GLY D . A 1 31 ARG 31 31 ARG ARG D . A 1 32 GLY 32 32 GLY GLY D . A 1 33 ARG 33 33 ARG ARG D . A 1 34 LYS 34 ? ? ? D . A 1 35 LEU 35 ? ? ? D . A 1 36 SER 36 ? ? ? D . A 1 37 GLY 37 ? ? ? D . A 1 38 ASP 38 ? ? ? D . A 1 39 GLN 39 ? ? ? D . A 1 40 ILE 40 ? ? ? D . A 1 41 THR 41 ? ? ? D . A 1 42 LEU 42 ? ? ? D . A 1 43 PRO 43 ? ? ? D . A 1 44 THR 44 ? ? ? D . A 1 45 THR 45 ? ? ? D . A 1 46 VAL 46 ? ? ? D . A 1 47 ASP 47 ? ? ? D . A 1 48 TYR 48 ? ? ? D . A 1 49 SER 49 ? ? ? D . A 1 50 SER 50 ? ? ? D . A 1 51 VAL 51 ? ? ? D . A 1 52 PRO 52 ? ? ? D . A 1 53 LYS 53 ? ? ? D . A 1 54 GLN 54 ? ? ? D . A 1 55 THR 55 ? ? ? D . A 1 56 ASP 56 ? ? ? D . A 1 57 VAL 57 ? ? ? D . A 1 58 GLU 58 ? ? ? D . A 1 59 GLU 59 ? ? ? D . A 1 60 TRP 60 ? ? ? D . A 1 61 THR 61 ? ? ? D . A 1 62 SER 62 ? ? ? D . A 1 63 TRP 63 ? ? ? D . A 1 64 ASP 64 ? ? ? D . A 1 65 GLU 65 ? ? ? D . A 1 66 ASP 66 ? ? ? D . A 1 67 ALA 67 ? ? ? D . A 1 68 PRO 68 ? ? ? D . A 1 69 THR 69 ? ? ? D . A 1 70 SER 70 ? ? ? D . A 1 71 VAL 71 ? ? ? D . A 1 72 LYS 72 ? ? ? D . A 1 73 ILE 73 ? ? ? D . A 1 74 GLU 74 ? ? ? D . A 1 75 GLY 75 ? ? ? D . A 1 76 GLY 76 ? ? ? D . A 1 77 ASN 77 ? ? ? D . A 1 78 GLY 78 ? ? ? D . A 1 79 ASN 79 ? ? ? D . A 1 80 VAL 80 ? ? ? D . A 1 81 ALA 81 ? ? ? D . A 1 82 THR 82 ? ? ? D . A 1 83 GLN 83 ? ? ? D . A 1 84 GLN 84 ? ? ? D . A 1 85 ASN 85 ? ? ? D . A 1 86 SER 86 ? ? ? D . A 1 87 LEU 87 ? ? ? D . A 1 88 GLU 88 ? ? ? D . A 1 89 GLN 89 ? ? ? D . A 1 90 LEU 90 ? ? ? D . A 1 91 GLU 91 ? ? ? D . A 1 92 PRO 92 ? ? ? D . A 1 93 ASP 93 ? ? ? D . A 1 94 TYR 94 ? ? ? D . A 1 95 PHE 95 ? ? ? D . A 1 96 LYS 96 ? ? ? D . A 1 97 ASP 97 ? ? ? D . A 1 98 MET 98 ? ? ? D . A 1 99 THR 99 ? ? ? D . A 1 100 PRO 100 ? ? ? D . A 1 101 THR 101 ? ? ? D . A 1 102 ILE 102 ? ? ? D . A 1 103 ARG 103 ? ? ? D . A 1 104 LYS 104 ? ? ? D . A 1 105 THR 105 ? ? ? D . A 1 106 GLN 106 ? ? ? D . A 1 107 LYS 107 ? ? ? D . A 1 108 ILE 108 ? ? ? D . A 1 109 VAL 109 ? ? ? D . A 1 110 ILE 110 ? ? ? D . A 1 111 LYS 111 ? ? ? D . A 1 112 LYS 112 ? ? ? D . A 1 113 ARG 113 ? ? ? D . A 1 114 GLU 114 ? ? ? D . A 1 115 PRO 115 ? ? ? D . A 1 116 LEU 116 ? ? ? D . A 1 117 ASN 117 ? ? ? D . A 1 118 PHE 118 ? ? ? D . A 1 119 GLY 119 ? ? ? D . A 1 120 ILE 120 ? ? ? D . A 1 121 PRO 121 ? ? ? D . A 1 122 ASP 122 ? ? ? D . A 1 123 GLY 123 ? ? ? D . A 1 124 SER 124 ? ? ? D . A 1 125 THR 125 ? ? ? D . A 1 126 GLY 126 ? ? ? D . A 1 127 PHE 127 ? ? ? D . A 1 128 SER 128 ? ? ? D . A 1 129 SER 129 ? ? ? D . A 1 130 ARG 130 ? ? ? D . A 1 131 LEU 131 ? ? ? D . A 1 132 ALA 132 ? ? ? D . A 1 133 ALA 133 ? ? ? D . A 1 134 THR 134 ? ? ? D . A 1 135 GLN 135 ? ? ? D . A 1 136 ASP 136 ? ? ? D . A 1 137 LEU 137 ? ? ? D . A 1 138 PRO 138 ? ? ? D . A 1 139 PHE 139 ? ? ? D . A 1 140 ILE 140 ? ? ? D . A 1 141 HIS 141 ? ? ? D . A 1 142 GLN 142 ? ? ? D . A 1 143 SER 143 ? ? ? D . A 1 144 SER 144 ? ? ? D . A 1 145 GLU 145 ? ? ? D . A 1 146 LEU 146 ? ? ? D . A 1 147 GLY 147 ? ? ? D . A 1 148 ASP 148 ? ? ? D . A 1 149 LEU 149 ? ? ? D . A 1 150 ASP 150 ? ? ? D . A 1 151 THR 151 ? ? ? D . A 1 152 TRP 152 ? ? ? D . A 1 153 GLN 153 ? ? ? D . A 1 154 GLU 154 ? ? ? D . A 1 155 ASN 155 ? ? ? D . A 1 156 THR 156 ? ? ? D . A 1 157 ASN 157 ? ? ? D . A 1 158 ALA 158 ? ? ? D . A 1 159 TRP 159 ? ? ? D . A 1 160 GLU 160 ? ? ? D . A 1 161 GLU 161 ? ? ? D . A 1 162 GLU 162 ? ? ? D . A 1 163 GLU 163 ? ? ? D . A 1 164 ASP 164 ? ? ? D . A 1 165 ALA 165 ? ? ? D . A 1 166 ALA 166 ? ? ? D . A 1 167 TRP 167 ? ? ? D . A 1 168 GLN 168 ? ? ? D . A 1 169 ALA 169 ? ? ? D . A 1 170 GLU 170 ? ? ? D . A 1 171 GLU 171 ? ? ? D . A 1 172 VAL 172 ? ? ? D . A 1 173 LEU 173 ? ? ? D . A 1 174 ARG 174 ? ? ? D . A 1 175 SER 175 ? ? ? D . A 1 176 ARG 176 ? ? ? D . A 1 177 THR 177 ? ? ? D . A 1 178 ASN 178 ? ? ? D . A 1 179 VAL 179 ? ? ? D . A 1 180 CYS 180 ? ? ? D . A 1 181 LEU 181 ? ? ? D . A 1 182 LEU 182 ? ? ? D . A 1 183 CYS 183 ? ? ? D . A 1 184 SER 184 ? ? ? D . A 1 185 LEU 185 ? ? ? D . A 1 186 LEU 186 ? ? ? D . A 1 187 PHE 187 ? ? ? D . A 1 188 HIS 188 ? ? ? D . A 1 189 HIS 189 ? ? ? D . A 1 190 PRO 190 ? ? ? D . A 1 191 THR 191 ? ? ? D . A 1 192 PRO 192 ? ? ? D . A 1 193 THR 193 ? ? ? D . A 1 194 SER 194 ? ? ? D . A 1 195 THR 195 ? ? ? D . A 1 196 PRO 196 ? ? ? D . A 1 197 TYR 197 ? ? ? D . A 1 198 ILE 198 ? ? ? D . A 1 199 ASN 199 ? ? ? D . A 1 200 GLN 200 ? ? ? D . A 1 201 SER 201 ? ? ? D . A 1 202 VAL 202 ? ? ? D . A 1 203 LYS 203 ? ? ? D . A 1 204 ILE 204 ? ? ? D . A 1 205 GLU 205 ? ? ? D . A 1 206 ARG 206 ? ? ? D . A 1 207 VAL 207 ? ? ? D . A 1 208 SER 208 ? ? ? D . A 1 209 LEU 209 ? ? ? D . A 1 210 GLY 210 ? ? ? D . A 1 211 GLN 211 ? ? ? D . A 1 212 TRP 212 ? ? ? D . A 1 213 SER 213 ? ? ? D . A 1 214 TYR 214 ? ? ? D . A 1 215 GLY 215 ? ? ? D . A 1 216 LYS 216 ? ? ? D . A 1 217 SER 217 ? ? ? D . A 1 218 LYS 218 ? ? ? D . A 1 219 GLU 219 ? ? ? D . A 1 220 GLN 220 ? ? ? D . A 1 221 GLN 221 ? ? ? D . A 1 222 LYS 222 ? ? ? D . A 1 223 LEU 223 ? ? ? D . A 1 224 ALA 224 ? ? ? D . A 1 225 ASP 225 ? ? ? D . A 1 226 ARG 226 ? ? ? D . A 1 227 GLU 227 ? ? ? D . A 1 228 LYS 228 ? ? ? D . A 1 229 ARG 229 ? ? ? D . A 1 230 ALA 230 ? ? ? D . A 1 231 ALA 231 ? ? ? D . A 1 232 GLU 232 ? ? ? D . A 1 233 GLN 233 ? ? ? D . A 1 234 GLN 234 ? ? ? D . A 1 235 ARG 235 ? ? ? D . A 1 236 LYS 236 ? ? ? D . A 1 237 LYS 237 ? ? ? D . A 1 238 MET 238 ? ? ? D . A 1 239 GLU 239 ? ? ? D . A 1 240 LYS 240 ? ? ? D . A 1 241 GLU 241 ? ? ? D . A 1 242 ALA 242 ? ? ? D . A 1 243 GLN 243 ? ? ? D . A 1 244 ARG 244 ? ? ? D . A 1 245 LEU 245 ? ? ? D . A 1 246 MET 246 ? ? ? D . A 1 247 LYS 247 ? ? ? D . A 1 248 LYS 248 ? ? ? D . A 1 249 GLU 249 ? ? ? D . A 1 250 GLN 250 ? ? ? D . A 1 251 ASN 251 ? ? ? D . A 1 252 LYS 252 ? ? ? D . A 1 253 ILE 253 ? ? ? D . A 1 254 GLY 254 ? ? ? D . A 1 255 VAL 255 ? ? ? D . A 1 256 LYS 256 ? ? ? D . A 1 257 LEU 257 ? ? ? D . A 1 258 SER 258 ? ? ? D . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Transmembrane inner ear expressed protein {PDB ID=7usy, label_asym_id=D, auth_asym_id=D, SMTL ID=7usy.1.D}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 7usy, label_asym_id=D' 'target-template alignment' . 4 'model 2' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-11 6 PDB https://www.wwpdb.org . 2024-12-06 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A D 3 1 D # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;MPSGNEEINHLSALDQFVAPGLRLWMLIALVGGVLLIMIVIVCCFMRIRIPRTKRQIDLIAAKRKLRKST KNSAEANAHNDERAQAIVMNSMPSGGGGGAPSTSSSRHTGSRIQSQV ; ;MPSGNEEINHLSALDQFVAPGLRLWMLIALVGGVLLIMIVIVCCFMRIRIPRTKRQIDLIAAKRKLRKST KNSAEANAHNDERAQAIVMNSMPSGGGGGAPSTSSSRHTGSRIQSQV ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 19 49 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 7usy 2023-08-09 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 258 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 258 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 7.100 19.355 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MAITQFRLFKFCTCLATVFSFLKRLICRSGRGRKLSGDQITLPTTVDYSSVPKQTDVEEWTSWDEDAPTSVKIEGGNGNVATQQNSLEQLEPDYFKDMTPTIRKTQKIVIKKREPLNFGIPDGSTGFSSRLAATQDLPFIHQSSELGDLDTWQENTNAWEEEEDAAWQAEEVLRSRTNVCLLCSLLFHHPTPTSTPYINQSVKIERVSLGQWSYGKSKEQQKLADREKRAAEQQRKKMEKEAQRLMKKEQNKIGVKLS 2 1 2 --APGLRLWMLIALVGGVLLIMIVIVCCFMRIR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 7usy.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 2' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . ILE 3 3 ? A 110.769 168.868 196.227 1 1 D ILE 0.590 1 ATOM 2 C CA . ILE 3 3 ? A 111.469 170.146 196.606 1 1 D ILE 0.590 1 ATOM 3 C C . ILE 3 3 ? A 111.801 170.960 195.361 1 1 D ILE 0.590 1 ATOM 4 O O . ILE 3 3 ? A 112.145 170.391 194.337 1 1 D ILE 0.590 1 ATOM 5 C CB . ILE 3 3 ? A 112.763 169.871 197.388 1 1 D ILE 0.590 1 ATOM 6 C CG1 . ILE 3 3 ? A 112.551 169.079 198.705 1 1 D ILE 0.590 1 ATOM 7 C CG2 . ILE 3 3 ? A 113.450 171.226 197.680 1 1 D ILE 0.590 1 ATOM 8 C CD1 . ILE 3 3 ? A 113.834 168.480 199.309 1 1 D ILE 0.590 1 ATOM 9 N N . THR 4 4 ? A 111.695 172.306 195.441 1 1 D THR 0.620 1 ATOM 10 C CA . THR 4 4 ? A 111.846 173.271 194.357 1 1 D THR 0.620 1 ATOM 11 C C . THR 4 4 ? A 113.284 173.437 193.865 1 1 D THR 0.620 1 ATOM 12 O O . THR 4 4 ? A 113.514 173.816 192.726 1 1 D THR 0.620 1 ATOM 13 C CB . THR 4 4 ? A 111.290 174.622 194.806 1 1 D THR 0.620 1 ATOM 14 O OG1 . THR 4 4 ? A 111.939 175.088 195.984 1 1 D THR 0.620 1 ATOM 15 C CG2 . THR 4 4 ? A 109.810 174.452 195.183 1 1 D THR 0.620 1 ATOM 16 N N . GLN 5 5 ? A 114.281 173.121 194.722 1 1 D GLN 0.480 1 ATOM 17 C CA . GLN 5 5 ? A 115.709 173.219 194.440 1 1 D GLN 0.480 1 ATOM 18 C C . GLN 5 5 ? A 116.412 171.856 194.296 1 1 D GLN 0.480 1 ATOM 19 O O . GLN 5 5 ? A 117.544 171.777 193.815 1 1 D GLN 0.480 1 ATOM 20 C CB . GLN 5 5 ? A 116.379 173.997 195.610 1 1 D GLN 0.480 1 ATOM 21 C CG . GLN 5 5 ? A 115.658 175.304 196.036 1 1 D GLN 0.480 1 ATOM 22 C CD . GLN 5 5 ? A 115.574 176.295 194.872 1 1 D GLN 0.480 1 ATOM 23 O OE1 . GLN 5 5 ? A 116.571 176.646 194.258 1 1 D GLN 0.480 1 ATOM 24 N NE2 . GLN 5 5 ? A 114.340 176.763 194.558 1 1 D GLN 0.480 1 ATOM 25 N N . PHE 6 6 ? A 115.758 170.729 194.670 1 1 D PHE 0.420 1 ATOM 26 C CA . PHE 6 6 ? A 116.362 169.394 194.632 1 1 D PHE 0.420 1 ATOM 27 C C . PHE 6 6 ? A 115.613 168.412 193.720 1 1 D PHE 0.420 1 ATOM 28 O O . PHE 6 6 ? A 116.100 167.329 193.413 1 1 D PHE 0.420 1 ATOM 29 C CB . PHE 6 6 ? A 116.407 168.718 196.039 1 1 D PHE 0.420 1 ATOM 30 C CG . PHE 6 6 ? A 117.425 169.314 196.977 1 1 D PHE 0.420 1 ATOM 31 C CD1 . PHE 6 6 ? A 118.806 169.116 196.814 1 1 D PHE 0.420 1 ATOM 32 C CD2 . PHE 6 6 ? A 116.990 170.027 198.103 1 1 D PHE 0.420 1 ATOM 33 C CE1 . PHE 6 6 ? A 119.715 169.661 197.731 1 1 D PHE 0.420 1 ATOM 34 C CE2 . PHE 6 6 ? A 117.892 170.604 199.003 1 1 D PHE 0.420 1 ATOM 35 C CZ . PHE 6 6 ? A 119.260 170.429 198.804 1 1 D PHE 0.420 1 ATOM 36 N N . ARG 7 7 ? A 114.388 168.762 193.247 1 1 D ARG 0.430 1 ATOM 37 C CA . ARG 7 7 ? A 113.640 167.860 192.383 1 1 D ARG 0.430 1 ATOM 38 C C . ARG 7 7 ? A 113.051 168.529 191.163 1 1 D ARG 0.430 1 ATOM 39 O O . ARG 7 7 ? A 112.892 167.881 190.129 1 1 D ARG 0.430 1 ATOM 40 C CB . ARG 7 7 ? A 112.513 167.125 193.165 1 1 D ARG 0.430 1 ATOM 41 C CG . ARG 7 7 ? A 112.273 165.691 192.650 1 1 D ARG 0.430 1 ATOM 42 C CD . ARG 7 7 ? A 113.431 164.739 192.970 1 1 D ARG 0.430 1 ATOM 43 N NE . ARG 7 7 ? A 113.430 164.415 194.439 1 1 D ARG 0.430 1 ATOM 44 C CZ . ARG 7 7 ? A 112.983 163.276 194.984 1 1 D ARG 0.430 1 ATOM 45 N NH1 . ARG 7 7 ? A 112.473 162.290 194.249 1 1 D ARG 0.430 1 ATOM 46 N NH2 . ARG 7 7 ? A 113.051 163.113 196.306 1 1 D ARG 0.430 1 ATOM 47 N N . LEU 8 8 ? A 112.766 169.843 191.213 1 1 D LEU 0.470 1 ATOM 48 C CA . LEU 8 8 ? A 112.283 170.578 190.056 1 1 D LEU 0.470 1 ATOM 49 C C . LEU 8 8 ? A 113.289 170.579 188.912 1 1 D LEU 0.470 1 ATOM 50 O O . LEU 8 8 ? A 112.944 170.306 187.766 1 1 D LEU 0.470 1 ATOM 51 C CB . LEU 8 8 ? A 111.907 172.016 190.463 1 1 D LEU 0.470 1 ATOM 52 C CG . LEU 8 8 ? A 111.445 172.936 189.316 1 1 D LEU 0.470 1 ATOM 53 C CD1 . LEU 8 8 ? A 110.241 172.368 188.550 1 1 D LEU 0.470 1 ATOM 54 C CD2 . LEU 8 8 ? A 111.143 174.341 189.852 1 1 D LEU 0.470 1 ATOM 55 N N . PHE 9 9 ? A 114.589 170.789 189.225 1 1 D PHE 0.450 1 ATOM 56 C CA . PHE 9 9 ? A 115.674 170.699 188.262 1 1 D PHE 0.450 1 ATOM 57 C C . PHE 9 9 ? A 115.728 169.328 187.587 1 1 D PHE 0.450 1 ATOM 58 O O . PHE 9 9 ? A 115.886 169.231 186.377 1 1 D PHE 0.450 1 ATOM 59 C CB . PHE 9 9 ? A 117.022 171.066 188.947 1 1 D PHE 0.450 1 ATOM 60 C CG . PHE 9 9 ? A 118.154 171.121 187.954 1 1 D PHE 0.450 1 ATOM 61 C CD1 . PHE 9 9 ? A 119.055 170.049 187.838 1 1 D PHE 0.450 1 ATOM 62 C CD2 . PHE 9 9 ? A 118.297 172.224 187.098 1 1 D PHE 0.450 1 ATOM 63 C CE1 . PHE 9 9 ? A 120.086 170.084 186.891 1 1 D PHE 0.450 1 ATOM 64 C CE2 . PHE 9 9 ? A 119.327 172.260 186.149 1 1 D PHE 0.450 1 ATOM 65 C CZ . PHE 9 9 ? A 120.224 171.192 186.049 1 1 D PHE 0.450 1 ATOM 66 N N . LYS 10 10 ? A 115.535 168.226 188.345 1 1 D LYS 0.600 1 ATOM 67 C CA . LYS 10 10 ? A 115.496 166.884 187.783 1 1 D LYS 0.600 1 ATOM 68 C C . LYS 10 10 ? A 114.367 166.670 186.788 1 1 D LYS 0.600 1 ATOM 69 O O . LYS 10 10 ? A 114.589 166.119 185.708 1 1 D LYS 0.600 1 ATOM 70 C CB . LYS 10 10 ? A 115.405 165.813 188.893 1 1 D LYS 0.600 1 ATOM 71 C CG . LYS 10 10 ? A 116.687 165.725 189.734 1 1 D LYS 0.600 1 ATOM 72 C CD . LYS 10 10 ? A 116.585 164.640 190.815 1 1 D LYS 0.600 1 ATOM 73 C CE . LYS 10 10 ? A 117.806 164.565 191.738 1 1 D LYS 0.600 1 ATOM 74 N NZ . LYS 10 10 ? A 117.583 163.582 192.825 1 1 D LYS 0.600 1 ATOM 75 N N . PHE 11 11 ? A 113.142 167.137 187.093 1 1 D PHE 0.510 1 ATOM 76 C CA . PHE 11 11 ? A 112.020 167.088 186.169 1 1 D PHE 0.510 1 ATOM 77 C C . PHE 11 11 ? A 112.270 167.925 184.911 1 1 D PHE 0.510 1 ATOM 78 O O . PHE 11 11 ? A 112.060 167.458 183.790 1 1 D PHE 0.510 1 ATOM 79 C CB . PHE 11 11 ? A 110.723 167.537 186.895 1 1 D PHE 0.510 1 ATOM 80 C CG . PHE 11 11 ? A 109.514 167.426 186.002 1 1 D PHE 0.510 1 ATOM 81 C CD1 . PHE 11 11 ? A 108.956 168.576 185.418 1 1 D PHE 0.510 1 ATOM 82 C CD2 . PHE 11 11 ? A 108.963 166.173 185.693 1 1 D PHE 0.510 1 ATOM 83 C CE1 . PHE 11 11 ? A 107.859 168.476 184.554 1 1 D PHE 0.510 1 ATOM 84 C CE2 . PHE 11 11 ? A 107.864 166.071 184.831 1 1 D PHE 0.510 1 ATOM 85 C CZ . PHE 11 11 ? A 107.306 167.223 184.266 1 1 D PHE 0.510 1 ATOM 86 N N . CYS 12 12 ? A 112.781 169.162 185.070 1 1 D CYS 0.610 1 ATOM 87 C CA . CYS 12 12 ? A 113.132 170.045 183.965 1 1 D CYS 0.610 1 ATOM 88 C C . CYS 12 12 ? A 114.221 169.473 183.068 1 1 D CYS 0.610 1 ATOM 89 O O . CYS 12 12 ? A 114.111 169.513 181.839 1 1 D CYS 0.610 1 ATOM 90 C CB . CYS 12 12 ? A 113.568 171.439 184.485 1 1 D CYS 0.610 1 ATOM 91 S SG . CYS 12 12 ? A 112.186 172.360 185.238 1 1 D CYS 0.610 1 ATOM 92 N N . THR 13 13 ? A 115.276 168.876 183.652 1 1 D THR 0.640 1 ATOM 93 C CA . THR 13 13 ? A 116.310 168.131 182.930 1 1 D THR 0.640 1 ATOM 94 C C . THR 13 13 ? A 115.746 166.930 182.199 1 1 D THR 0.640 1 ATOM 95 O O . THR 13 13 ? A 116.028 166.726 181.024 1 1 D THR 0.640 1 ATOM 96 C CB . THR 13 13 ? A 117.457 167.676 183.828 1 1 D THR 0.640 1 ATOM 97 O OG1 . THR 13 13 ? A 118.115 168.819 184.356 1 1 D THR 0.640 1 ATOM 98 C CG2 . THR 13 13 ? A 118.541 166.896 183.067 1 1 D THR 0.640 1 ATOM 99 N N . CYS 14 14 ? A 114.880 166.113 182.835 1 1 D CYS 0.620 1 ATOM 100 C CA . CYS 14 14 ? A 114.245 164.980 182.169 1 1 D CYS 0.620 1 ATOM 101 C C . CYS 14 14 ? A 113.363 165.383 180.994 1 1 D CYS 0.620 1 ATOM 102 O O . CYS 14 14 ? A 113.443 164.773 179.921 1 1 D CYS 0.620 1 ATOM 103 C CB . CYS 14 14 ? A 113.428 164.105 183.156 1 1 D CYS 0.620 1 ATOM 104 S SG . CYS 14 14 ? A 114.494 163.204 184.330 1 1 D CYS 0.620 1 ATOM 105 N N . LEU 15 15 ? A 112.548 166.445 181.139 1 1 D LEU 0.580 1 ATOM 106 C CA . LEU 15 15 ? A 111.749 167.017 180.065 1 1 D LEU 0.580 1 ATOM 107 C C . LEU 15 15 ? A 112.583 167.569 178.908 1 1 D LEU 0.580 1 ATOM 108 O O . LEU 15 15 ? A 112.294 167.329 177.734 1 1 D LEU 0.580 1 ATOM 109 C CB . LEU 15 15 ? A 110.817 168.126 180.599 1 1 D LEU 0.580 1 ATOM 110 C CG . LEU 15 15 ? A 109.869 168.741 179.545 1 1 D LEU 0.580 1 ATOM 111 C CD1 . LEU 15 15 ? A 108.932 167.701 178.909 1 1 D LEU 0.580 1 ATOM 112 C CD2 . LEU 15 15 ? A 109.062 169.889 180.163 1 1 D LEU 0.580 1 ATOM 113 N N . ALA 16 16 ? A 113.679 168.293 179.218 1 1 D ALA 0.660 1 ATOM 114 C CA . ALA 16 16 ? A 114.648 168.756 178.248 1 1 D ALA 0.660 1 ATOM 115 C C . ALA 16 16 ? A 115.319 167.600 177.500 1 1 D ALA 0.660 1 ATOM 116 O O . ALA 16 16 ? A 115.436 167.618 176.284 1 1 D ALA 0.660 1 ATOM 117 C CB . ALA 16 16 ? A 115.712 169.625 178.950 1 1 D ALA 0.660 1 ATOM 118 N N . THR 17 17 ? A 115.727 166.528 178.218 1 1 D THR 0.670 1 ATOM 119 C CA . THR 17 17 ? A 116.347 165.330 177.633 1 1 D THR 0.670 1 ATOM 120 C C . THR 17 17 ? A 115.457 164.607 176.643 1 1 D THR 0.670 1 ATOM 121 O O . THR 17 17 ? A 115.906 164.275 175.536 1 1 D THR 0.670 1 ATOM 122 C CB . THR 17 17 ? A 116.800 164.314 178.684 1 1 D THR 0.670 1 ATOM 123 O OG1 . THR 17 17 ? A 117.838 164.874 179.478 1 1 D THR 0.670 1 ATOM 124 C CG2 . THR 17 17 ? A 117.411 163.036 178.078 1 1 D THR 0.670 1 ATOM 125 N N . VAL 18 18 ? A 114.170 164.367 176.976 1 1 D VAL 0.630 1 ATOM 126 C CA . VAL 18 18 ? A 113.203 163.752 176.068 1 1 D VAL 0.630 1 ATOM 127 C C . VAL 18 18 ? A 112.910 164.623 174.854 1 1 D VAL 0.630 1 ATOM 128 O O . VAL 18 18 ? A 112.922 164.140 173.724 1 1 D VAL 0.630 1 ATOM 129 C CB . VAL 18 18 ? A 111.913 163.258 176.735 1 1 D VAL 0.630 1 ATOM 130 C CG1 . VAL 18 18 ? A 112.267 162.122 177.715 1 1 D VAL 0.630 1 ATOM 131 C CG2 . VAL 18 18 ? A 111.151 164.378 177.458 1 1 D VAL 0.630 1 ATOM 132 N N . PHE 19 19 ? A 112.728 165.950 175.045 1 1 D PHE 0.600 1 ATOM 133 C CA . PHE 19 19 ? A 112.551 166.914 173.971 1 1 D PHE 0.600 1 ATOM 134 C C . PHE 19 19 ? A 113.758 166.943 173.038 1 1 D PHE 0.600 1 ATOM 135 O O . PHE 19 19 ? A 113.633 166.895 171.816 1 1 D PHE 0.600 1 ATOM 136 C CB . PHE 19 19 ? A 112.303 168.322 174.579 1 1 D PHE 0.600 1 ATOM 137 C CG . PHE 19 19 ? A 112.052 169.361 173.520 1 1 D PHE 0.600 1 ATOM 138 C CD1 . PHE 19 19 ? A 113.074 170.243 173.129 1 1 D PHE 0.600 1 ATOM 139 C CD2 . PHE 19 19 ? A 110.813 169.425 172.869 1 1 D PHE 0.600 1 ATOM 140 C CE1 . PHE 19 19 ? A 112.855 171.180 172.112 1 1 D PHE 0.600 1 ATOM 141 C CE2 . PHE 19 19 ? A 110.591 170.361 171.852 1 1 D PHE 0.600 1 ATOM 142 C CZ . PHE 19 19 ? A 111.610 171.243 171.476 1 1 D PHE 0.600 1 ATOM 143 N N . SER 20 20 ? A 114.975 166.964 173.608 1 1 D SER 0.600 1 ATOM 144 C CA . SER 20 20 ? A 116.213 166.891 172.851 1 1 D SER 0.600 1 ATOM 145 C C . SER 20 20 ? A 116.365 165.598 172.064 1 1 D SER 0.600 1 ATOM 146 O O . SER 20 20 ? A 116.816 165.623 170.922 1 1 D SER 0.600 1 ATOM 147 C CB . SER 20 20 ? A 117.478 167.080 173.719 1 1 D SER 0.600 1 ATOM 148 O OG . SER 20 20 ? A 117.602 168.423 174.200 1 1 D SER 0.600 1 ATOM 149 N N . PHE 21 21 ? A 115.992 164.427 172.626 1 1 D PHE 0.610 1 ATOM 150 C CA . PHE 21 21 ? A 115.955 163.161 171.898 1 1 D PHE 0.610 1 ATOM 151 C C . PHE 21 21 ? A 114.970 163.183 170.729 1 1 D PHE 0.610 1 ATOM 152 O O . PHE 21 21 ? A 115.323 162.774 169.619 1 1 D PHE 0.610 1 ATOM 153 C CB . PHE 21 21 ? A 115.653 161.981 172.868 1 1 D PHE 0.610 1 ATOM 154 C CG . PHE 21 21 ? A 115.680 160.634 172.180 1 1 D PHE 0.610 1 ATOM 155 C CD1 . PHE 21 21 ? A 114.475 160.008 171.819 1 1 D PHE 0.610 1 ATOM 156 C CD2 . PHE 21 21 ? A 116.892 159.998 171.862 1 1 D PHE 0.610 1 ATOM 157 C CE1 . PHE 21 21 ? A 114.479 158.774 171.158 1 1 D PHE 0.610 1 ATOM 158 C CE2 . PHE 21 21 ? A 116.898 158.761 171.203 1 1 D PHE 0.610 1 ATOM 159 C CZ . PHE 21 21 ? A 115.691 158.147 170.853 1 1 D PHE 0.610 1 ATOM 160 N N . LEU 22 22 ? A 113.748 163.711 170.937 1 1 D LEU 0.610 1 ATOM 161 C CA . LEU 22 22 ? A 112.749 163.884 169.892 1 1 D LEU 0.610 1 ATOM 162 C C . LEU 22 22 ? A 113.207 164.806 168.777 1 1 D LEU 0.610 1 ATOM 163 O O . LEU 22 22 ? A 113.098 164.476 167.596 1 1 D LEU 0.610 1 ATOM 164 C CB . LEU 22 22 ? A 111.433 164.446 170.482 1 1 D LEU 0.610 1 ATOM 165 C CG . LEU 22 22 ? A 110.669 163.470 171.397 1 1 D LEU 0.610 1 ATOM 166 C CD1 . LEU 22 22 ? A 109.499 164.196 172.079 1 1 D LEU 0.610 1 ATOM 167 C CD2 . LEU 22 22 ? A 110.174 162.233 170.634 1 1 D LEU 0.610 1 ATOM 168 N N . LYS 23 23 ? A 113.798 165.964 169.124 1 1 D LYS 0.600 1 ATOM 169 C CA . LYS 23 23 ? A 114.361 166.883 168.153 1 1 D LYS 0.600 1 ATOM 170 C C . LYS 23 23 ? A 115.499 166.277 167.356 1 1 D LYS 0.600 1 ATOM 171 O O . LYS 23 23 ? A 115.564 166.414 166.130 1 1 D LYS 0.600 1 ATOM 172 C CB . LYS 23 23 ? A 114.867 168.168 168.845 1 1 D LYS 0.600 1 ATOM 173 C CG . LYS 23 23 ? A 115.377 169.220 167.847 1 1 D LYS 0.600 1 ATOM 174 C CD . LYS 23 23 ? A 115.767 170.540 168.523 1 1 D LYS 0.600 1 ATOM 175 C CE . LYS 23 23 ? A 116.285 171.578 167.524 1 1 D LYS 0.600 1 ATOM 176 N NZ . LYS 23 23 ? A 116.638 172.829 168.230 1 1 D LYS 0.600 1 ATOM 177 N N . ARG 24 24 ? A 116.420 165.550 168.018 1 1 D ARG 0.560 1 ATOM 178 C CA . ARG 24 24 ? A 117.474 164.829 167.331 1 1 D ARG 0.560 1 ATOM 179 C C . ARG 24 24 ? A 116.938 163.771 166.384 1 1 D ARG 0.560 1 ATOM 180 O O . ARG 24 24 ? A 117.402 163.668 165.249 1 1 D ARG 0.560 1 ATOM 181 C CB . ARG 24 24 ? A 118.468 164.147 168.306 1 1 D ARG 0.560 1 ATOM 182 C CG . ARG 24 24 ? A 119.387 165.138 169.047 1 1 D ARG 0.560 1 ATOM 183 C CD . ARG 24 24 ? A 120.550 164.494 169.816 1 1 D ARG 0.560 1 ATOM 184 N NE . ARG 24 24 ? A 119.997 163.566 170.866 1 1 D ARG 0.560 1 ATOM 185 C CZ . ARG 24 24 ? A 119.768 163.920 172.150 1 1 D ARG 0.560 1 ATOM 186 N NH1 . ARG 24 24 ? A 120.012 165.152 172.570 1 1 D ARG 0.560 1 ATOM 187 N NH2 . ARG 24 24 ? A 119.255 163.048 173.009 1 1 D ARG 0.560 1 ATOM 188 N N . LEU 25 25 ? A 115.938 162.975 166.796 1 1 D LEU 0.600 1 ATOM 189 C CA . LEU 25 25 ? A 115.337 161.961 165.950 1 1 D LEU 0.600 1 ATOM 190 C C . LEU 25 25 ? A 114.703 162.501 164.671 1 1 D LEU 0.600 1 ATOM 191 O O . LEU 25 25 ? A 114.923 161.952 163.595 1 1 D LEU 0.600 1 ATOM 192 C CB . LEU 25 25 ? A 114.268 161.163 166.725 1 1 D LEU 0.600 1 ATOM 193 C CG . LEU 25 25 ? A 113.590 160.043 165.907 1 1 D LEU 0.600 1 ATOM 194 C CD1 . LEU 25 25 ? A 114.584 158.970 165.432 1 1 D LEU 0.600 1 ATOM 195 C CD2 . LEU 25 25 ? A 112.436 159.424 166.703 1 1 D LEU 0.600 1 ATOM 196 N N . ILE 26 26 ? A 113.939 163.613 164.760 1 1 D ILE 0.550 1 ATOM 197 C CA . ILE 26 26 ? A 113.317 164.268 163.608 1 1 D ILE 0.550 1 ATOM 198 C C . ILE 26 26 ? A 114.354 164.759 162.614 1 1 D ILE 0.550 1 ATOM 199 O O . ILE 26 26 ? A 114.250 164.543 161.402 1 1 D ILE 0.550 1 ATOM 200 C CB . ILE 26 26 ? A 112.465 165.460 164.056 1 1 D ILE 0.550 1 ATOM 201 C CG1 . ILE 26 26 ? A 111.250 164.985 164.886 1 1 D ILE 0.550 1 ATOM 202 C CG2 . ILE 26 26 ? A 111.996 166.305 162.844 1 1 D ILE 0.550 1 ATOM 203 C CD1 . ILE 26 26 ? A 110.531 166.131 165.609 1 1 D ILE 0.550 1 ATOM 204 N N . CYS 27 27 ? A 115.418 165.415 163.101 1 1 D CYS 0.550 1 ATOM 205 C CA . CYS 27 27 ? A 116.495 165.913 162.265 1 1 D CYS 0.550 1 ATOM 206 C C . CYS 27 27 ? A 117.288 164.809 161.572 1 1 D CYS 0.550 1 ATOM 207 O O . CYS 27 27 ? A 117.746 164.968 160.452 1 1 D CYS 0.550 1 ATOM 208 C CB . CYS 27 27 ? A 117.476 166.811 163.054 1 1 D CYS 0.550 1 ATOM 209 S SG . CYS 27 27 ? A 116.703 168.306 163.753 1 1 D CYS 0.550 1 ATOM 210 N N . ARG 28 28 ? A 117.451 163.639 162.226 1 1 D ARG 0.450 1 ATOM 211 C CA . ARG 28 28 ? A 118.162 162.498 161.669 1 1 D ARG 0.450 1 ATOM 212 C C . ARG 28 28 ? A 117.457 161.807 160.504 1 1 D ARG 0.450 1 ATOM 213 O O . ARG 28 28 ? A 118.090 161.075 159.747 1 1 D ARG 0.450 1 ATOM 214 C CB . ARG 28 28 ? A 118.385 161.414 162.751 1 1 D ARG 0.450 1 ATOM 215 C CG . ARG 28 28 ? A 119.451 161.751 163.807 1 1 D ARG 0.450 1 ATOM 216 C CD . ARG 28 28 ? A 119.476 160.701 164.914 1 1 D ARG 0.450 1 ATOM 217 N NE . ARG 28 28 ? A 120.424 161.181 165.972 1 1 D ARG 0.450 1 ATOM 218 C CZ . ARG 28 28 ? A 120.640 160.516 167.109 1 1 D ARG 0.450 1 ATOM 219 N NH1 . ARG 28 28 ? A 120.009 159.379 167.380 1 1 D ARG 0.450 1 ATOM 220 N NH2 . ARG 28 28 ? A 121.541 160.973 167.988 1 1 D ARG 0.450 1 ATOM 221 N N . SER 29 29 ? A 116.135 162.004 160.335 1 1 D SER 0.480 1 ATOM 222 C CA . SER 29 29 ? A 115.377 161.412 159.243 1 1 D SER 0.480 1 ATOM 223 C C . SER 29 29 ? A 114.981 162.447 158.205 1 1 D SER 0.480 1 ATOM 224 O O . SER 29 29 ? A 114.262 162.150 157.253 1 1 D SER 0.480 1 ATOM 225 C CB . SER 29 29 ? A 114.112 160.666 159.758 1 1 D SER 0.480 1 ATOM 226 O OG . SER 29 29 ? A 113.200 161.531 160.437 1 1 D SER 0.480 1 ATOM 227 N N . GLY 30 30 ? A 115.477 163.695 158.337 1 1 D GLY 0.460 1 ATOM 228 C CA . GLY 30 30 ? A 115.162 164.770 157.411 1 1 D GLY 0.460 1 ATOM 229 C C . GLY 30 30 ? A 116.406 165.439 156.921 1 1 D GLY 0.460 1 ATOM 230 O O . GLY 30 30 ? A 117.465 165.394 157.523 1 1 D GLY 0.460 1 ATOM 231 N N . ARG 31 31 ? A 116.299 166.134 155.778 1 1 D ARG 0.380 1 ATOM 232 C CA . ARG 31 31 ? A 117.444 166.763 155.160 1 1 D ARG 0.380 1 ATOM 233 C C . ARG 31 31 ? A 117.103 168.212 154.886 1 1 D ARG 0.380 1 ATOM 234 O O . ARG 31 31 ? A 117.198 168.707 153.767 1 1 D ARG 0.380 1 ATOM 235 C CB . ARG 31 31 ? A 117.866 165.965 153.893 1 1 D ARG 0.380 1 ATOM 236 C CG . ARG 31 31 ? A 119.102 166.467 153.108 1 1 D ARG 0.380 1 ATOM 237 C CD . ARG 31 31 ? A 120.393 166.573 153.926 1 1 D ARG 0.380 1 ATOM 238 N NE . ARG 31 31 ? A 121.426 167.268 153.083 1 1 D ARG 0.380 1 ATOM 239 C CZ . ARG 31 31 ? A 121.480 168.600 152.919 1 1 D ARG 0.380 1 ATOM 240 N NH1 . ARG 31 31 ? A 120.580 169.404 153.475 1 1 D ARG 0.380 1 ATOM 241 N NH2 . ARG 31 31 ? A 122.445 169.121 152.164 1 1 D ARG 0.380 1 ATOM 242 N N . GLY 32 32 ? A 116.700 168.962 155.939 1 1 D GLY 0.450 1 ATOM 243 C CA . GLY 32 32 ? A 116.561 170.418 155.855 1 1 D GLY 0.450 1 ATOM 244 C C . GLY 32 32 ? A 117.822 171.088 155.356 1 1 D GLY 0.450 1 ATOM 245 O O . GLY 32 32 ? A 118.934 170.688 155.680 1 1 D GLY 0.450 1 ATOM 246 N N . ARG 33 33 ? A 117.659 172.107 154.504 1 1 D ARG 0.260 1 ATOM 247 C CA . ARG 33 33 ? A 118.755 172.845 153.941 1 1 D ARG 0.260 1 ATOM 248 C C . ARG 33 33 ? A 118.382 174.343 154.005 1 1 D ARG 0.260 1 ATOM 249 O O . ARG 33 33 ? A 117.175 174.644 154.232 1 1 D ARG 0.260 1 ATOM 250 C CB . ARG 33 33 ? A 119.032 172.401 152.473 1 1 D ARG 0.260 1 ATOM 251 C CG . ARG 33 33 ? A 120.215 173.105 151.767 1 1 D ARG 0.260 1 ATOM 252 C CD . ARG 33 33 ? A 121.522 173.070 152.560 1 1 D ARG 0.260 1 ATOM 253 N NE . ARG 33 33 ? A 122.503 173.965 151.871 1 1 D ARG 0.260 1 ATOM 254 C CZ . ARG 33 33 ? A 123.694 174.291 152.407 1 1 D ARG 0.260 1 ATOM 255 N NH1 . ARG 33 33 ? A 124.118 173.724 153.534 1 1 D ARG 0.260 1 ATOM 256 N NH2 . ARG 33 33 ? A 124.446 175.223 151.836 1 1 D ARG 0.260 1 ATOM 257 O OXT . ARG 33 33 ? A 119.309 175.178 153.843 1 1 D ARG 0.260 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.540 2 1 3 0.024 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 3 ILE 1 0.590 2 1 A 4 THR 1 0.620 3 1 A 5 GLN 1 0.480 4 1 A 6 PHE 1 0.420 5 1 A 7 ARG 1 0.430 6 1 A 8 LEU 1 0.470 7 1 A 9 PHE 1 0.450 8 1 A 10 LYS 1 0.600 9 1 A 11 PHE 1 0.510 10 1 A 12 CYS 1 0.610 11 1 A 13 THR 1 0.640 12 1 A 14 CYS 1 0.620 13 1 A 15 LEU 1 0.580 14 1 A 16 ALA 1 0.660 15 1 A 17 THR 1 0.670 16 1 A 18 VAL 1 0.630 17 1 A 19 PHE 1 0.600 18 1 A 20 SER 1 0.600 19 1 A 21 PHE 1 0.610 20 1 A 22 LEU 1 0.610 21 1 A 23 LYS 1 0.600 22 1 A 24 ARG 1 0.560 23 1 A 25 LEU 1 0.600 24 1 A 26 ILE 1 0.550 25 1 A 27 CYS 1 0.550 26 1 A 28 ARG 1 0.450 27 1 A 29 SER 1 0.480 28 1 A 30 GLY 1 0.460 29 1 A 31 ARG 1 0.380 30 1 A 32 GLY 1 0.450 31 1 A 33 ARG 1 0.260 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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