data_SMR-e4c62a90279ba0286b0daf1fa6ba2719_2 _entry.id SMR-e4c62a90279ba0286b0daf1fa6ba2719_2 _struct.entry_id SMR-e4c62a90279ba0286b0daf1fa6ba2719_2 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q8N5J2 (isoform 2)/ MINY1_HUMAN, Ubiquitin carboxyl-terminal hydrolase MINDY-1 Estimated model accuracy of this model is 0.038, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q8N5J2 (isoform 2)' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 48594.409 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP MINY1_HUMAN Q8N5J2 1 ;MPQELPQSPRTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDE LMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIP LYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAA AKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPG AEGGSGSPETQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQGR GATSGRPAGERRQRPKHESDCILL ; 'Ubiquitin carboxyl-terminal hydrolase MINDY-1' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 374 1 374 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . MINY1_HUMAN Q8N5J2 Q8N5J2-2 1 374 9606 'Homo sapiens (Human)' 2010-11-02 49C3DA92F5491B1A # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no C ;MPQELPQSPRTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDE LMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIP LYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAA AKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPG AEGGSGSPETQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQGR GATSGRPAGERRQRPKHESDCILL ; ;MPQELPQSPRTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDE LMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIP LYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAA AKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPG AEGGSGSPETQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQGR GATSGRPAGERRQRPKHESDCILL ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 PRO . 1 3 GLN . 1 4 GLU . 1 5 LEU . 1 6 PRO . 1 7 GLN . 1 8 SER . 1 9 PRO . 1 10 ARG . 1 11 THR . 1 12 ARG . 1 13 GLN . 1 14 PRO . 1 15 GLU . 1 16 PRO . 1 17 ASP . 1 18 PHE . 1 19 TYR . 1 20 CYS . 1 21 VAL . 1 22 LYS . 1 23 TRP . 1 24 ILE . 1 25 PRO . 1 26 TRP . 1 27 LYS . 1 28 GLY . 1 29 GLU . 1 30 GLN . 1 31 THR . 1 32 PRO . 1 33 ILE . 1 34 ILE . 1 35 THR . 1 36 GLN . 1 37 SER . 1 38 THR . 1 39 ASN . 1 40 GLY . 1 41 PRO . 1 42 CYS . 1 43 PRO . 1 44 LEU . 1 45 LEU . 1 46 ALA . 1 47 ILE . 1 48 MET . 1 49 ASN . 1 50 ILE . 1 51 LEU . 1 52 PHE . 1 53 LEU . 1 54 GLN . 1 55 TRP . 1 56 LYS . 1 57 VAL . 1 58 LYS . 1 59 LEU . 1 60 PRO . 1 61 PRO . 1 62 GLN . 1 63 LYS . 1 64 GLU . 1 65 VAL . 1 66 ILE . 1 67 THR . 1 68 SER . 1 69 ASP . 1 70 GLU . 1 71 LEU . 1 72 MET . 1 73 ALA . 1 74 HIS . 1 75 LEU . 1 76 GLY . 1 77 ASN . 1 78 CYS . 1 79 LEU . 1 80 LEU . 1 81 SER . 1 82 ILE . 1 83 LYS . 1 84 PRO . 1 85 GLN . 1 86 GLU . 1 87 LYS . 1 88 SER . 1 89 GLU . 1 90 GLY . 1 91 LEU . 1 92 GLN . 1 93 LEU . 1 94 ASN . 1 95 PHE . 1 96 GLN . 1 97 GLN . 1 98 ASN . 1 99 VAL . 1 100 ASP . 1 101 ASP . 1 102 ALA . 1 103 MET . 1 104 THR . 1 105 VAL . 1 106 LEU . 1 107 PRO . 1 108 LYS . 1 109 LEU . 1 110 ALA . 1 111 THR . 1 112 GLY . 1 113 LEU . 1 114 ASP . 1 115 VAL . 1 116 ASN . 1 117 VAL . 1 118 ARG . 1 119 PHE . 1 120 THR . 1 121 GLY . 1 122 VAL . 1 123 SER . 1 124 ASP . 1 125 PHE . 1 126 GLU . 1 127 TYR . 1 128 THR . 1 129 PRO . 1 130 GLU . 1 131 CYS . 1 132 SER . 1 133 VAL . 1 134 PHE . 1 135 ASP . 1 136 LEU . 1 137 LEU . 1 138 GLY . 1 139 ILE . 1 140 PRO . 1 141 LEU . 1 142 TYR . 1 143 HIS . 1 144 GLY . 1 145 TRP . 1 146 LEU . 1 147 VAL . 1 148 ASP . 1 149 PRO . 1 150 GLN . 1 151 SER . 1 152 PRO . 1 153 GLU . 1 154 ALA . 1 155 VAL . 1 156 ARG . 1 157 ALA . 1 158 VAL . 1 159 GLY . 1 160 LYS . 1 161 LEU . 1 162 SER . 1 163 TYR . 1 164 ASN . 1 165 GLN . 1 166 LEU . 1 167 VAL . 1 168 GLU . 1 169 ARG . 1 170 ILE . 1 171 ILE . 1 172 THR . 1 173 CYS . 1 174 LYS . 1 175 HIS . 1 176 SER . 1 177 SER . 1 178 ASP . 1 179 THR . 1 180 ASN . 1 181 LEU . 1 182 VAL . 1 183 THR . 1 184 GLU . 1 185 GLY . 1 186 LEU . 1 187 ILE . 1 188 ALA . 1 189 GLU . 1 190 GLN . 1 191 PHE . 1 192 LEU . 1 193 GLU . 1 194 THR . 1 195 THR . 1 196 ALA . 1 197 ALA . 1 198 GLN . 1 199 LEU . 1 200 THR . 1 201 TYR . 1 202 HIS . 1 203 GLY . 1 204 LEU . 1 205 CYS . 1 206 GLU . 1 207 LEU . 1 208 THR . 1 209 ALA . 1 210 ALA . 1 211 ALA . 1 212 LYS . 1 213 GLU . 1 214 GLY . 1 215 GLU . 1 216 LEU . 1 217 SER . 1 218 VAL . 1 219 PHE . 1 220 PHE . 1 221 ARG . 1 222 ASN . 1 223 ASN . 1 224 HIS . 1 225 PHE . 1 226 SER . 1 227 THR . 1 228 MET . 1 229 THR . 1 230 LYS . 1 231 HIS . 1 232 LYS . 1 233 SER . 1 234 HIS . 1 235 LEU . 1 236 TYR . 1 237 LEU . 1 238 LEU . 1 239 VAL . 1 240 THR . 1 241 ASP . 1 242 GLN . 1 243 GLY . 1 244 PHE . 1 245 LEU . 1 246 GLN . 1 247 GLU . 1 248 GLU . 1 249 GLN . 1 250 VAL . 1 251 VAL . 1 252 TRP . 1 253 GLU . 1 254 SER . 1 255 LEU . 1 256 HIS . 1 257 ASN . 1 258 VAL . 1 259 ASP . 1 260 GLY . 1 261 ASP . 1 262 SER . 1 263 CYS . 1 264 PHE . 1 265 CYS . 1 266 ASP . 1 267 SER . 1 268 ASP . 1 269 PHE . 1 270 HIS . 1 271 LEU . 1 272 SER . 1 273 HIS . 1 274 SER . 1 275 LEU . 1 276 GLY . 1 277 LYS . 1 278 GLY . 1 279 PRO . 1 280 GLY . 1 281 ALA . 1 282 GLU . 1 283 GLY . 1 284 GLY . 1 285 SER . 1 286 GLY . 1 287 SER . 1 288 PRO . 1 289 GLU . 1 290 THR . 1 291 GLN . 1 292 LEU . 1 293 GLN . 1 294 VAL . 1 295 ASP . 1 296 GLN . 1 297 ASP . 1 298 TYR . 1 299 LEU . 1 300 ILE . 1 301 ALA . 1 302 LEU . 1 303 SER . 1 304 LEU . 1 305 GLN . 1 306 GLN . 1 307 GLN . 1 308 GLN . 1 309 PRO . 1 310 ARG . 1 311 GLY . 1 312 PRO . 1 313 LEU . 1 314 GLY . 1 315 LEU . 1 316 THR . 1 317 ASP . 1 318 LEU . 1 319 GLU . 1 320 LEU . 1 321 ALA . 1 322 GLN . 1 323 GLN . 1 324 LEU . 1 325 GLN . 1 326 GLN . 1 327 GLU . 1 328 GLU . 1 329 TYR . 1 330 GLN . 1 331 GLN . 1 332 GLN . 1 333 GLN . 1 334 ALA . 1 335 ALA . 1 336 GLN . 1 337 PRO . 1 338 VAL . 1 339 ARG . 1 340 MET . 1 341 ARG . 1 342 THR . 1 343 ARG . 1 344 VAL . 1 345 LEU . 1 346 SER . 1 347 LEU . 1 348 GLN . 1 349 GLY . 1 350 ARG . 1 351 GLY . 1 352 ALA . 1 353 THR . 1 354 SER . 1 355 GLY . 1 356 ARG . 1 357 PRO . 1 358 ALA . 1 359 GLY . 1 360 GLU . 1 361 ARG . 1 362 ARG . 1 363 GLN . 1 364 ARG . 1 365 PRO . 1 366 LYS . 1 367 HIS . 1 368 GLU . 1 369 SER . 1 370 ASP . 1 371 CYS . 1 372 ILE . 1 373 LEU . 1 374 LEU . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? C . A 1 2 PRO 2 ? ? ? C . A 1 3 GLN 3 ? ? ? C . A 1 4 GLU 4 ? ? ? C . A 1 5 LEU 5 ? ? ? C . A 1 6 PRO 6 ? ? ? C . A 1 7 GLN 7 ? ? ? C . A 1 8 SER 8 ? ? ? C . A 1 9 PRO 9 ? ? ? C . A 1 10 ARG 10 ? ? ? C . A 1 11 THR 11 ? ? ? C . A 1 12 ARG 12 ? ? ? C . A 1 13 GLN 13 ? ? ? C . A 1 14 PRO 14 ? ? ? C . A 1 15 GLU 15 ? ? ? C . A 1 16 PRO 16 ? ? ? C . A 1 17 ASP 17 ? ? ? C . A 1 18 PHE 18 ? ? ? C . A 1 19 TYR 19 ? ? ? C . A 1 20 CYS 20 ? ? ? C . A 1 21 VAL 21 ? ? ? C . A 1 22 LYS 22 ? ? ? C . A 1 23 TRP 23 ? ? ? C . A 1 24 ILE 24 ? ? ? C . A 1 25 PRO 25 ? ? ? C . A 1 26 TRP 26 ? ? ? C . A 1 27 LYS 27 ? ? ? C . A 1 28 GLY 28 ? ? ? C . A 1 29 GLU 29 ? ? ? C . A 1 30 GLN 30 ? ? ? C . A 1 31 THR 31 ? ? ? C . A 1 32 PRO 32 ? ? ? C . A 1 33 ILE 33 ? ? ? C . A 1 34 ILE 34 ? ? ? C . A 1 35 THR 35 ? ? ? C . A 1 36 GLN 36 ? ? ? C . A 1 37 SER 37 ? ? ? C . A 1 38 THR 38 ? ? ? C . A 1 39 ASN 39 ? ? ? C . A 1 40 GLY 40 ? ? ? C . A 1 41 PRO 41 ? ? ? C . A 1 42 CYS 42 ? ? ? C . A 1 43 PRO 43 ? ? ? C . A 1 44 LEU 44 ? ? ? C . A 1 45 LEU 45 ? ? ? C . A 1 46 ALA 46 ? ? ? C . A 1 47 ILE 47 ? ? ? C . A 1 48 MET 48 ? ? ? C . A 1 49 ASN 49 ? ? ? C . A 1 50 ILE 50 ? ? ? C . A 1 51 LEU 51 ? ? ? C . A 1 52 PHE 52 ? ? ? C . A 1 53 LEU 53 ? ? ? C . A 1 54 GLN 54 ? ? ? C . A 1 55 TRP 55 ? ? ? C . A 1 56 LYS 56 ? ? ? C . A 1 57 VAL 57 ? ? ? C . A 1 58 LYS 58 ? ? ? C . A 1 59 LEU 59 ? ? ? C . A 1 60 PRO 60 ? ? ? C . A 1 61 PRO 61 ? ? ? C . A 1 62 GLN 62 ? ? ? C . A 1 63 LYS 63 ? ? ? C . A 1 64 GLU 64 ? ? ? C . A 1 65 VAL 65 ? ? ? C . A 1 66 ILE 66 ? ? ? C . A 1 67 THR 67 ? ? ? C . A 1 68 SER 68 ? ? ? C . A 1 69 ASP 69 ? ? ? C . A 1 70 GLU 70 ? ? ? C . A 1 71 LEU 71 ? ? ? C . A 1 72 MET 72 ? ? ? C . A 1 73 ALA 73 ? ? ? C . A 1 74 HIS 74 ? ? ? C . A 1 75 LEU 75 ? ? ? C . A 1 76 GLY 76 ? ? ? C . A 1 77 ASN 77 ? ? ? C . A 1 78 CYS 78 ? ? ? C . A 1 79 LEU 79 ? ? ? C . A 1 80 LEU 80 ? ? ? C . A 1 81 SER 81 ? ? ? C . A 1 82 ILE 82 ? ? ? C . A 1 83 LYS 83 ? ? ? C . A 1 84 PRO 84 ? ? ? C . A 1 85 GLN 85 ? ? ? C . A 1 86 GLU 86 ? ? ? C . A 1 87 LYS 87 ? ? ? C . A 1 88 SER 88 ? ? ? C . A 1 89 GLU 89 ? ? ? C . A 1 90 GLY 90 ? ? ? C . A 1 91 LEU 91 ? ? ? C . A 1 92 GLN 92 ? ? ? C . A 1 93 LEU 93 ? ? ? C . A 1 94 ASN 94 ? ? ? C . A 1 95 PHE 95 ? ? ? C . A 1 96 GLN 96 ? ? ? C . A 1 97 GLN 97 ? ? ? C . A 1 98 ASN 98 ? ? ? C . A 1 99 VAL 99 ? ? ? C . A 1 100 ASP 100 ? ? ? C . A 1 101 ASP 101 ? ? ? C . A 1 102 ALA 102 ? ? ? C . A 1 103 MET 103 ? ? ? C . A 1 104 THR 104 ? ? ? C . A 1 105 VAL 105 ? ? ? C . A 1 106 LEU 106 ? ? ? C . A 1 107 PRO 107 ? ? ? C . A 1 108 LYS 108 ? ? ? C . A 1 109 LEU 109 ? ? ? C . A 1 110 ALA 110 ? ? ? C . A 1 111 THR 111 ? ? ? C . A 1 112 GLY 112 ? ? ? C . A 1 113 LEU 113 ? ? ? C . A 1 114 ASP 114 ? ? ? C . A 1 115 VAL 115 ? ? ? C . A 1 116 ASN 116 ? ? ? C . A 1 117 VAL 117 ? ? ? C . A 1 118 ARG 118 ? ? ? C . A 1 119 PHE 119 ? ? ? C . A 1 120 THR 120 ? ? ? C . A 1 121 GLY 121 ? ? ? C . A 1 122 VAL 122 ? ? ? C . A 1 123 SER 123 ? ? ? C . A 1 124 ASP 124 ? ? ? C . A 1 125 PHE 125 ? ? ? C . A 1 126 GLU 126 ? ? ? C . A 1 127 TYR 127 ? ? ? C . A 1 128 THR 128 ? ? ? C . A 1 129 PRO 129 ? ? ? C . A 1 130 GLU 130 ? ? ? C . A 1 131 CYS 131 ? ? ? C . A 1 132 SER 132 ? ? ? C . A 1 133 VAL 133 ? ? ? C . A 1 134 PHE 134 ? ? ? C . A 1 135 ASP 135 ? ? ? C . A 1 136 LEU 136 ? ? ? C . A 1 137 LEU 137 ? ? ? C . A 1 138 GLY 138 ? ? ? C . A 1 139 ILE 139 ? ? ? C . A 1 140 PRO 140 ? ? ? C . A 1 141 LEU 141 ? ? ? C . A 1 142 TYR 142 ? ? ? C . A 1 143 HIS 143 ? ? ? C . A 1 144 GLY 144 ? ? ? C . A 1 145 TRP 145 ? ? ? C . A 1 146 LEU 146 ? ? ? C . A 1 147 VAL 147 ? ? ? C . A 1 148 ASP 148 ? ? ? C . A 1 149 PRO 149 ? ? ? C . A 1 150 GLN 150 ? ? ? C . A 1 151 SER 151 ? ? ? C . A 1 152 PRO 152 ? ? ? C . A 1 153 GLU 153 ? ? ? C . A 1 154 ALA 154 ? ? ? C . A 1 155 VAL 155 ? ? ? C . A 1 156 ARG 156 ? ? ? C . A 1 157 ALA 157 ? ? ? C . A 1 158 VAL 158 ? ? ? C . A 1 159 GLY 159 ? ? ? C . A 1 160 LYS 160 ? ? ? C . A 1 161 LEU 161 ? ? ? C . A 1 162 SER 162 ? ? ? C . A 1 163 TYR 163 ? ? ? C . A 1 164 ASN 164 ? ? ? C . A 1 165 GLN 165 ? ? ? C . A 1 166 LEU 166 ? ? ? C . A 1 167 VAL 167 ? ? ? C . A 1 168 GLU 168 ? ? ? C . A 1 169 ARG 169 ? ? ? C . A 1 170 ILE 170 ? ? ? C . A 1 171 ILE 171 ? ? ? C . A 1 172 THR 172 ? ? ? C . A 1 173 CYS 173 ? ? ? C . A 1 174 LYS 174 ? ? ? C . A 1 175 HIS 175 ? ? ? C . A 1 176 SER 176 ? ? ? C . A 1 177 SER 177 ? ? ? C . A 1 178 ASP 178 ? ? ? C . A 1 179 THR 179 ? ? ? C . A 1 180 ASN 180 ? ? ? C . A 1 181 LEU 181 ? ? ? C . A 1 182 VAL 182 ? ? ? C . A 1 183 THR 183 ? ? ? C . A 1 184 GLU 184 ? ? ? C . A 1 185 GLY 185 ? ? ? C . A 1 186 LEU 186 ? ? ? C . A 1 187 ILE 187 ? ? ? C . A 1 188 ALA 188 ? ? ? C . A 1 189 GLU 189 ? ? ? C . A 1 190 GLN 190 ? ? ? C . A 1 191 PHE 191 ? ? ? C . A 1 192 LEU 192 ? ? ? C . A 1 193 GLU 193 ? ? ? C . A 1 194 THR 194 ? ? ? C . A 1 195 THR 195 ? ? ? C . A 1 196 ALA 196 ? ? ? C . A 1 197 ALA 197 ? ? ? C . A 1 198 GLN 198 ? ? ? C . A 1 199 LEU 199 ? ? ? C . A 1 200 THR 200 ? ? ? C . A 1 201 TYR 201 ? ? ? C . A 1 202 HIS 202 ? ? ? C . A 1 203 GLY 203 ? ? ? C . A 1 204 LEU 204 ? ? ? C . A 1 205 CYS 205 ? ? ? C . A 1 206 GLU 206 ? ? ? C . A 1 207 LEU 207 ? ? ? C . A 1 208 THR 208 ? ? ? C . A 1 209 ALA 209 ? ? ? C . A 1 210 ALA 210 ? ? ? C . A 1 211 ALA 211 ? ? ? C . A 1 212 LYS 212 ? ? ? C . A 1 213 GLU 213 ? ? ? C . A 1 214 GLY 214 ? ? ? C . A 1 215 GLU 215 ? ? ? C . A 1 216 LEU 216 ? ? ? C . A 1 217 SER 217 ? ? ? C . A 1 218 VAL 218 ? ? ? C . A 1 219 PHE 219 ? ? ? C . A 1 220 PHE 220 ? ? ? C . A 1 221 ARG 221 ? ? ? C . A 1 222 ASN 222 ? ? ? C . A 1 223 ASN 223 ? ? ? C . A 1 224 HIS 224 ? ? ? C . A 1 225 PHE 225 ? ? ? C . A 1 226 SER 226 ? ? ? C . A 1 227 THR 227 ? ? ? C . A 1 228 MET 228 ? ? ? C . A 1 229 THR 229 ? ? ? C . A 1 230 LYS 230 ? ? ? C . A 1 231 HIS 231 ? ? ? C . A 1 232 LYS 232 ? ? ? C . A 1 233 SER 233 ? ? ? C . A 1 234 HIS 234 ? ? ? C . A 1 235 LEU 235 ? ? ? C . A 1 236 TYR 236 ? ? ? C . A 1 237 LEU 237 ? ? ? C . A 1 238 LEU 238 ? ? ? C . A 1 239 VAL 239 ? ? ? C . A 1 240 THR 240 ? ? ? C . A 1 241 ASP 241 ? ? ? C . A 1 242 GLN 242 ? ? ? C . A 1 243 GLY 243 ? ? ? C . A 1 244 PHE 244 ? ? ? C . A 1 245 LEU 245 ? ? ? C . A 1 246 GLN 246 ? ? ? C . A 1 247 GLU 247 ? ? ? C . A 1 248 GLU 248 ? ? ? C . A 1 249 GLN 249 ? ? ? C . A 1 250 VAL 250 ? ? ? C . A 1 251 VAL 251 ? ? ? C . A 1 252 TRP 252 ? ? ? C . A 1 253 GLU 253 ? ? ? C . A 1 254 SER 254 ? ? ? C . A 1 255 LEU 255 ? ? ? C . A 1 256 HIS 256 ? ? ? C . A 1 257 ASN 257 ? ? ? C . A 1 258 VAL 258 ? ? ? C . A 1 259 ASP 259 ? ? ? C . A 1 260 GLY 260 ? ? ? C . A 1 261 ASP 261 ? ? ? C . A 1 262 SER 262 ? ? ? C . A 1 263 CYS 263 ? ? ? C . A 1 264 PHE 264 ? ? ? C . A 1 265 CYS 265 ? ? ? C . A 1 266 ASP 266 ? ? ? C . A 1 267 SER 267 ? ? ? C . A 1 268 ASP 268 ? ? ? C . A 1 269 PHE 269 ? ? ? C . A 1 270 HIS 270 ? ? ? C . A 1 271 LEU 271 ? ? ? C . A 1 272 SER 272 ? ? ? C . A 1 273 HIS 273 ? ? ? C . A 1 274 SER 274 ? ? ? C . A 1 275 LEU 275 ? ? ? C . A 1 276 GLY 276 ? ? ? C . A 1 277 LYS 277 ? ? ? C . A 1 278 GLY 278 ? ? ? C . A 1 279 PRO 279 ? ? ? C . A 1 280 GLY 280 ? ? ? C . A 1 281 ALA 281 ? ? ? C . A 1 282 GLU 282 ? ? ? C . A 1 283 GLY 283 ? ? ? C . A 1 284 GLY 284 ? ? ? C . A 1 285 SER 285 ? ? ? C . A 1 286 GLY 286 ? ? ? C . A 1 287 SER 287 ? ? ? C . A 1 288 PRO 288 ? ? ? C . A 1 289 GLU 289 ? ? ? C . A 1 290 THR 290 ? ? ? C . A 1 291 GLN 291 ? ? ? C . A 1 292 LEU 292 ? ? ? C . A 1 293 GLN 293 ? ? ? C . A 1 294 VAL 294 ? ? ? C . A 1 295 ASP 295 ? ? ? C . A 1 296 GLN 296 ? ? ? C . A 1 297 ASP 297 ? ? ? C . A 1 298 TYR 298 ? ? ? C . A 1 299 LEU 299 ? ? ? C . A 1 300 ILE 300 ? ? ? C . A 1 301 ALA 301 ? ? ? C . A 1 302 LEU 302 ? ? ? C . A 1 303 SER 303 ? ? ? C . A 1 304 LEU 304 ? ? ? C . A 1 305 GLN 305 ? ? ? C . A 1 306 GLN 306 ? ? ? C . A 1 307 GLN 307 ? ? ? C . A 1 308 GLN 308 ? ? ? C . A 1 309 PRO 309 ? ? ? C . A 1 310 ARG 310 ? ? ? C . A 1 311 GLY 311 ? ? ? C . A 1 312 PRO 312 ? ? ? C . A 1 313 LEU 313 313 LEU LEU C . A 1 314 GLY 314 314 GLY GLY C . A 1 315 LEU 315 315 LEU LEU C . A 1 316 THR 316 316 THR THR C . A 1 317 ASP 317 317 ASP ASP C . A 1 318 LEU 318 318 LEU LEU C . A 1 319 GLU 319 319 GLU GLU C . A 1 320 LEU 320 320 LEU LEU C . A 1 321 ALA 321 321 ALA ALA C . A 1 322 GLN 322 322 GLN GLN C . A 1 323 GLN 323 323 GLN GLN C . A 1 324 LEU 324 324 LEU LEU C . A 1 325 GLN 325 325 GLN GLN C . A 1 326 GLN 326 326 GLN GLN C . A 1 327 GLU 327 327 GLU GLU C . A 1 328 GLU 328 328 GLU GLU C . A 1 329 TYR 329 329 TYR TYR C . A 1 330 GLN 330 330 GLN GLN C . A 1 331 GLN 331 331 GLN GLN C . A 1 332 GLN 332 ? ? ? C . A 1 333 GLN 333 ? ? ? C . A 1 334 ALA 334 ? ? ? C . A 1 335 ALA 335 ? ? ? C . A 1 336 GLN 336 ? ? ? C . A 1 337 PRO 337 ? ? ? C . A 1 338 VAL 338 ? ? ? C . A 1 339 ARG 339 ? ? ? C . A 1 340 MET 340 ? ? ? C . A 1 341 ARG 341 ? ? ? C . A 1 342 THR 342 ? ? ? C . A 1 343 ARG 343 ? ? ? C . A 1 344 VAL 344 ? ? ? C . A 1 345 LEU 345 ? ? ? C . A 1 346 SER 346 ? ? ? C . A 1 347 LEU 347 ? ? ? C . A 1 348 GLN 348 ? ? ? C . A 1 349 GLY 349 ? ? ? C . A 1 350 ARG 350 ? ? ? C . A 1 351 GLY 351 ? ? ? C . A 1 352 ALA 352 ? ? ? C . A 1 353 THR 353 ? ? ? C . A 1 354 SER 354 ? ? ? C . A 1 355 GLY 355 ? ? ? C . A 1 356 ARG 356 ? ? ? C . A 1 357 PRO 357 ? ? ? C . A 1 358 ALA 358 ? ? ? C . A 1 359 GLY 359 ? ? ? C . A 1 360 GLU 360 ? ? ? C . A 1 361 ARG 361 ? ? ? C . A 1 362 ARG 362 ? ? ? C . A 1 363 GLN 363 ? ? ? C . A 1 364 ARG 364 ? ? ? C . A 1 365 PRO 365 ? ? ? C . A 1 366 LYS 366 ? ? ? C . A 1 367 HIS 367 ? ? ? C . A 1 368 GLU 368 ? ? ? C . A 1 369 SER 369 ? ? ? C . A 1 370 ASP 370 ? ? ? C . A 1 371 CYS 371 ? ? ? C . A 1 372 ILE 372 ? ? ? C . A 1 373 LEU 373 ? ? ? C . A 1 374 LEU 374 ? ? ? C . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Ubiquitin carboxyl-terminal hydrolase MINDY-1 {PDB ID=5mn9, label_asym_id=C, auth_asym_id=C, SMTL ID=5mn9.1.C}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 5mn9, label_asym_id=C' 'target-template alignment' . 4 'model 2' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-11 6 PDB https://www.wwpdb.org . 2024-12-06 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A C 2 1 C # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 GPLGSQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQ GPLGSQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQ # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 6 44 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 5mn9 2024-01-17 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 374 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 374 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 6.6e-07 100.000 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MPQELPQSPRTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPETQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGERRQRPKHESDCILL 2 1 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQ------------------------------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 5mn9.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 2' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . LEU 313 313 ? A 27.896 88.344 10.672 1 1 C LEU 0.610 1 ATOM 2 C CA . LEU 313 313 ? A 29.132 89.182 10.788 1 1 C LEU 0.610 1 ATOM 3 C C . LEU 313 313 ? A 29.058 90.265 11.872 1 1 C LEU 0.610 1 ATOM 4 O O . LEU 313 313 ? A 29.411 91.392 11.618 1 1 C LEU 0.610 1 ATOM 5 C CB . LEU 313 313 ? A 29.384 89.815 9.381 1 1 C LEU 0.610 1 ATOM 6 C CG . LEU 313 313 ? A 29.798 88.828 8.261 1 1 C LEU 0.610 1 ATOM 7 C CD1 . LEU 313 313 ? A 29.878 89.565 6.913 1 1 C LEU 0.610 1 ATOM 8 C CD2 . LEU 313 313 ? A 31.154 88.151 8.536 1 1 C LEU 0.610 1 ATOM 9 N N . GLY 314 314 ? A 28.606 89.976 13.134 1 1 C GLY 0.710 1 ATOM 10 C CA . GLY 314 314 ? A 28.469 91.041 14.143 1 1 C GLY 0.710 1 ATOM 11 C C . GLY 314 314 ? A 27.611 92.224 13.737 1 1 C GLY 0.710 1 ATOM 12 O O . GLY 314 314 ? A 26.463 92.047 13.346 1 1 C GLY 0.710 1 ATOM 13 N N . LEU 315 315 ? A 28.161 93.453 13.815 1 1 C LEU 0.820 1 ATOM 14 C CA . LEU 315 315 ? A 27.448 94.688 13.542 1 1 C LEU 0.820 1 ATOM 15 C C . LEU 315 315 ? A 27.586 95.136 12.094 1 1 C LEU 0.820 1 ATOM 16 O O . LEU 315 315 ? A 27.002 96.148 11.708 1 1 C LEU 0.820 1 ATOM 17 C CB . LEU 315 315 ? A 27.987 95.815 14.455 1 1 C LEU 0.820 1 ATOM 18 C CG . LEU 315 315 ? A 27.531 95.728 15.925 1 1 C LEU 0.820 1 ATOM 19 C CD1 . LEU 315 315 ? A 28.331 96.751 16.747 1 1 C LEU 0.820 1 ATOM 20 C CD2 . LEU 315 315 ? A 26.022 96.009 16.050 1 1 C LEU 0.820 1 ATOM 21 N N . THR 316 316 ? A 28.287 94.357 11.229 1 1 C THR 0.860 1 ATOM 22 C CA . THR 316 316 ? A 28.589 94.730 9.840 1 1 C THR 0.860 1 ATOM 23 C C . THR 316 316 ? A 27.374 95.124 9.038 1 1 C THR 0.860 1 ATOM 24 O O . THR 316 316 ? A 27.389 96.155 8.376 1 1 C THR 0.860 1 ATOM 25 C CB . THR 316 316 ? A 29.270 93.609 9.057 1 1 C THR 0.860 1 ATOM 26 O OG1 . THR 316 316 ? A 30.514 93.300 9.655 1 1 C THR 0.860 1 ATOM 27 C CG2 . THR 316 316 ? A 29.596 93.956 7.591 1 1 C THR 0.860 1 ATOM 28 N N . ASP 317 317 ? A 26.274 94.347 9.115 1 1 C ASP 0.810 1 ATOM 29 C CA . ASP 317 317 ? A 25.037 94.610 8.407 1 1 C ASP 0.810 1 ATOM 30 C C . ASP 317 317 ? A 24.373 95.912 8.850 1 1 C ASP 0.810 1 ATOM 31 O O . ASP 317 317 ? A 23.957 96.720 8.027 1 1 C ASP 0.810 1 ATOM 32 C CB . ASP 317 317 ? A 24.089 93.384 8.555 1 1 C ASP 0.810 1 ATOM 33 C CG . ASP 317 317 ? A 24.693 92.151 7.883 1 1 C ASP 0.810 1 ATOM 34 O OD1 . ASP 317 317 ? A 25.699 92.290 7.143 1 1 C ASP 0.810 1 ATOM 35 O OD2 . ASP 317 317 ? A 24.190 91.036 8.169 1 1 C ASP 0.810 1 ATOM 36 N N . LEU 318 318 ? A 24.315 96.183 10.176 1 1 C LEU 0.800 1 ATOM 37 C CA . LEU 318 318 ? A 23.767 97.415 10.712 1 1 C LEU 0.800 1 ATOM 38 C C . LEU 318 318 ? A 24.562 98.654 10.308 1 1 C LEU 0.800 1 ATOM 39 O O . LEU 318 318 ? A 23.997 99.605 9.765 1 1 C LEU 0.800 1 ATOM 40 C CB . LEU 318 318 ? A 23.698 97.314 12.257 1 1 C LEU 0.800 1 ATOM 41 C CG . LEU 318 318 ? A 23.184 98.574 12.994 1 1 C LEU 0.800 1 ATOM 42 C CD1 . LEU 318 318 ? A 21.854 99.122 12.439 1 1 C LEU 0.800 1 ATOM 43 C CD2 . LEU 318 318 ? A 23.050 98.278 14.496 1 1 C LEU 0.800 1 ATOM 44 N N . GLU 319 319 ? A 25.899 98.651 10.501 1 1 C GLU 0.700 1 ATOM 45 C CA . GLU 319 319 ? A 26.771 99.771 10.183 1 1 C GLU 0.700 1 ATOM 46 C C . GLU 319 319 ? A 26.850 100.036 8.688 1 1 C GLU 0.700 1 ATOM 47 O O . GLU 319 319 ? A 26.773 101.180 8.237 1 1 C GLU 0.700 1 ATOM 48 C CB . GLU 319 319 ? A 28.163 99.589 10.832 1 1 C GLU 0.700 1 ATOM 49 C CG . GLU 319 319 ? A 28.060 99.542 12.377 1 1 C GLU 0.700 1 ATOM 50 C CD . GLU 319 319 ? A 29.430 99.468 13.042 1 1 C GLU 0.700 1 ATOM 51 O OE1 . GLU 319 319 ? A 30.149 100.498 13.018 1 1 C GLU 0.700 1 ATOM 52 O OE2 . GLU 319 319 ? A 29.757 98.384 13.593 1 1 C GLU 0.700 1 ATOM 53 N N . LEU 320 320 ? A 26.916 98.961 7.868 1 1 C LEU 0.780 1 ATOM 54 C CA . LEU 320 320 ? A 26.803 99.049 6.425 1 1 C LEU 0.780 1 ATOM 55 C C . LEU 320 320 ? A 25.459 99.637 5.985 1 1 C LEU 0.780 1 ATOM 56 O O . LEU 320 320 ? A 25.429 100.609 5.238 1 1 C LEU 0.780 1 ATOM 57 C CB . LEU 320 320 ? A 27.019 97.648 5.794 1 1 C LEU 0.780 1 ATOM 58 C CG . LEU 320 320 ? A 27.146 97.583 4.257 1 1 C LEU 0.780 1 ATOM 59 C CD1 . LEU 320 320 ? A 28.195 98.569 3.708 1 1 C LEU 0.780 1 ATOM 60 C CD2 . LEU 320 320 ? A 27.491 96.141 3.838 1 1 C LEU 0.780 1 ATOM 61 N N . ALA 321 321 ? A 24.310 99.144 6.512 1 1 C ALA 0.620 1 ATOM 62 C CA . ALA 321 321 ? A 22.979 99.657 6.212 1 1 C ALA 0.620 1 ATOM 63 C C . ALA 321 321 ? A 22.785 101.132 6.563 1 1 C ALA 0.620 1 ATOM 64 O O . ALA 321 321 ? A 22.204 101.893 5.780 1 1 C ALA 0.620 1 ATOM 65 C CB . ALA 321 321 ? A 21.907 98.821 6.953 1 1 C ALA 0.620 1 ATOM 66 N N . GLN 322 322 ? A 23.287 101.592 7.725 1 1 C GLN 0.540 1 ATOM 67 C CA . GLN 322 322 ? A 23.277 102.987 8.138 1 1 C GLN 0.540 1 ATOM 68 C C . GLN 322 322 ? A 24.065 103.908 7.222 1 1 C GLN 0.540 1 ATOM 69 O O . GLN 322 322 ? A 23.582 104.970 6.837 1 1 C GLN 0.540 1 ATOM 70 C CB . GLN 322 322 ? A 23.833 103.130 9.571 1 1 C GLN 0.540 1 ATOM 71 C CG . GLN 322 322 ? A 22.859 102.546 10.614 1 1 C GLN 0.540 1 ATOM 72 C CD . GLN 322 322 ? A 23.472 102.569 12.013 1 1 C GLN 0.540 1 ATOM 73 O OE1 . GLN 322 322 ? A 24.672 102.530 12.218 1 1 C GLN 0.540 1 ATOM 74 N NE2 . GLN 322 322 ? A 22.583 102.629 13.038 1 1 C GLN 0.540 1 ATOM 75 N N . GLN 323 323 ? A 25.289 103.489 6.823 1 1 C GLN 0.530 1 ATOM 76 C CA . GLN 323 323 ? A 26.090 104.186 5.836 1 1 C GLN 0.530 1 ATOM 77 C C . GLN 323 323 ? A 25.409 104.232 4.466 1 1 C GLN 0.530 1 ATOM 78 O O . GLN 323 323 ? A 25.270 105.289 3.880 1 1 C GLN 0.530 1 ATOM 79 C CB . GLN 323 323 ? A 27.483 103.532 5.699 1 1 C GLN 0.530 1 ATOM 80 C CG . GLN 323 323 ? A 28.462 104.350 4.821 1 1 C GLN 0.530 1 ATOM 81 C CD . GLN 323 323 ? A 29.665 103.503 4.412 1 1 C GLN 0.530 1 ATOM 82 O OE1 . GLN 323 323 ? A 30.546 103.202 5.214 1 1 C GLN 0.530 1 ATOM 83 N NE2 . GLN 323 323 ? A 29.714 103.100 3.120 1 1 C GLN 0.530 1 ATOM 84 N N . LEU 324 324 ? A 24.864 103.093 3.966 1 1 C LEU 0.640 1 ATOM 85 C CA . LEU 324 324 ? A 24.141 103.077 2.700 1 1 C LEU 0.640 1 ATOM 86 C C . LEU 324 324 ? A 22.902 103.955 2.715 1 1 C LEU 0.640 1 ATOM 87 O O . LEU 324 324 ? A 22.650 104.720 1.790 1 1 C LEU 0.640 1 ATOM 88 C CB . LEU 324 324 ? A 23.750 101.643 2.289 1 1 C LEU 0.640 1 ATOM 89 C CG . LEU 324 324 ? A 24.967 100.732 2.022 1 1 C LEU 0.640 1 ATOM 90 C CD1 . LEU 324 324 ? A 24.475 99.306 1.728 1 1 C LEU 0.640 1 ATOM 91 C CD2 . LEU 324 324 ? A 25.911 101.261 0.922 1 1 C LEU 0.640 1 ATOM 92 N N . GLN 325 325 ? A 22.112 103.933 3.808 1 1 C GLN 0.550 1 ATOM 93 C CA . GLN 325 325 ? A 20.953 104.799 3.939 1 1 C GLN 0.550 1 ATOM 94 C C . GLN 325 325 ? A 21.276 106.286 3.892 1 1 C GLN 0.550 1 ATOM 95 O O . GLN 325 325 ? A 20.546 107.098 3.328 1 1 C GLN 0.550 1 ATOM 96 C CB . GLN 325 325 ? A 20.205 104.528 5.270 1 1 C GLN 0.550 1 ATOM 97 C CG . GLN 325 325 ? A 18.820 105.215 5.384 1 1 C GLN 0.550 1 ATOM 98 C CD . GLN 325 325 ? A 17.911 104.760 4.243 1 1 C GLN 0.550 1 ATOM 99 O OE1 . GLN 325 325 ? A 17.328 103.681 4.298 1 1 C GLN 0.550 1 ATOM 100 N NE2 . GLN 325 325 ? A 17.803 105.580 3.173 1 1 C GLN 0.550 1 ATOM 101 N N . GLN 326 326 ? A 22.410 106.657 4.502 1 1 C GLN 0.570 1 ATOM 102 C CA . GLN 326 326 ? A 23.006 107.966 4.434 1 1 C GLN 0.570 1 ATOM 103 C C . GLN 326 326 ? A 23.463 108.367 3.031 1 1 C GLN 0.570 1 ATOM 104 O O . GLN 326 326 ? A 23.204 109.495 2.616 1 1 C GLN 0.570 1 ATOM 105 C CB . GLN 326 326 ? A 24.170 107.984 5.440 1 1 C GLN 0.570 1 ATOM 106 C CG . GLN 326 326 ? A 24.990 109.286 5.445 1 1 C GLN 0.570 1 ATOM 107 C CD . GLN 326 326 ? A 25.972 109.288 6.611 1 1 C GLN 0.570 1 ATOM 108 O OE1 . GLN 326 326 ? A 27.182 109.259 6.462 1 1 C GLN 0.570 1 ATOM 109 N NE2 . GLN 326 326 ? A 25.403 109.326 7.843 1 1 C GLN 0.570 1 ATOM 110 N N . GLU 327 327 ? A 24.098 107.454 2.253 1 1 C GLU 0.640 1 ATOM 111 C CA . GLU 327 327 ? A 24.442 107.648 0.843 1 1 C GLU 0.640 1 ATOM 112 C C . GLU 327 327 ? A 23.221 107.929 -0.041 1 1 C GLU 0.640 1 ATOM 113 O O . GLU 327 327 ? A 23.229 108.868 -0.832 1 1 C GLU 0.640 1 ATOM 114 C CB . GLU 327 327 ? A 25.204 106.412 0.272 1 1 C GLU 0.640 1 ATOM 115 C CG . GLU 327 327 ? A 26.611 106.162 0.890 1 1 C GLU 0.640 1 ATOM 116 C CD . GLU 327 327 ? A 27.302 104.880 0.405 1 1 C GLU 0.640 1 ATOM 117 O OE1 . GLU 327 327 ? A 27.046 104.454 -0.749 1 1 C GLU 0.640 1 ATOM 118 O OE2 . GLU 327 327 ? A 28.110 104.321 1.198 1 1 C GLU 0.640 1 ATOM 119 N N . GLU 328 328 ? A 22.113 107.170 0.151 1 1 C GLU 0.690 1 ATOM 120 C CA . GLU 328 328 ? A 20.799 107.409 -0.443 1 1 C GLU 0.690 1 ATOM 121 C C . GLU 328 328 ? A 20.210 108.778 -0.092 1 1 C GLU 0.690 1 ATOM 122 O O . GLU 328 328 ? A 19.616 109.449 -0.918 1 1 C GLU 0.690 1 ATOM 123 C CB . GLU 328 328 ? A 19.782 106.314 0.001 1 1 C GLU 0.690 1 ATOM 124 C CG . GLU 328 328 ? A 20.104 104.874 -0.485 1 1 C GLU 0.690 1 ATOM 125 C CD . GLU 328 328 ? A 19.963 104.706 -1.998 1 1 C GLU 0.690 1 ATOM 126 O OE1 . GLU 328 328 ? A 19.384 105.604 -2.657 1 1 C GLU 0.690 1 ATOM 127 O OE2 . GLU 328 328 ? A 20.415 103.645 -2.498 1 1 C GLU 0.690 1 ATOM 128 N N . TYR 329 329 ? A 20.386 109.252 1.162 1 1 C TYR 0.800 1 ATOM 129 C CA . TYR 329 329 ? A 19.878 110.544 1.607 1 1 C TYR 0.800 1 ATOM 130 C C . TYR 329 329 ? A 20.772 111.741 1.270 1 1 C TYR 0.800 1 ATOM 131 O O . TYR 329 329 ? A 20.394 112.881 1.489 1 1 C TYR 0.800 1 ATOM 132 C CB . TYR 329 329 ? A 19.635 110.517 3.141 1 1 C TYR 0.800 1 ATOM 133 C CG . TYR 329 329 ? A 18.462 109.666 3.574 1 1 C TYR 0.800 1 ATOM 134 C CD1 . TYR 329 329 ? A 17.524 109.091 2.690 1 1 C TYR 0.800 1 ATOM 135 C CD2 . TYR 329 329 ? A 18.268 109.488 4.953 1 1 C TYR 0.800 1 ATOM 136 C CE1 . TYR 329 329 ? A 16.413 108.395 3.180 1 1 C TYR 0.800 1 ATOM 137 C CE2 . TYR 329 329 ? A 17.170 108.766 5.444 1 1 C TYR 0.800 1 ATOM 138 C CZ . TYR 329 329 ? A 16.240 108.224 4.552 1 1 C TYR 0.800 1 ATOM 139 O OH . TYR 329 329 ? A 15.136 107.483 5.011 1 1 C TYR 0.800 1 ATOM 140 N N . GLN 330 330 ? A 21.987 111.496 0.733 1 1 C GLN 0.650 1 ATOM 141 C CA . GLN 330 330 ? A 22.795 112.521 0.098 1 1 C GLN 0.650 1 ATOM 142 C C . GLN 330 330 ? A 22.551 112.672 -1.402 1 1 C GLN 0.650 1 ATOM 143 O O . GLN 330 330 ? A 23.051 113.621 -2.000 1 1 C GLN 0.650 1 ATOM 144 C CB . GLN 330 330 ? A 24.288 112.189 0.309 1 1 C GLN 0.650 1 ATOM 145 C CG . GLN 330 330 ? A 24.737 112.482 1.755 1 1 C GLN 0.650 1 ATOM 146 C CD . GLN 330 330 ? A 26.131 111.916 2.022 1 1 C GLN 0.650 1 ATOM 147 O OE1 . GLN 330 330 ? A 26.600 110.974 1.410 1 1 C GLN 0.650 1 ATOM 148 N NE2 . GLN 330 330 ? A 26.826 112.526 3.018 1 1 C GLN 0.650 1 ATOM 149 N N . GLN 331 331 ? A 21.788 111.745 -2.020 1 1 C GLN 0.630 1 ATOM 150 C CA . GLN 331 331 ? A 21.198 111.925 -3.335 1 1 C GLN 0.630 1 ATOM 151 C C . GLN 331 331 ? A 19.902 112.791 -3.313 1 1 C GLN 0.630 1 ATOM 152 O O . GLN 331 331 ? A 19.424 113.187 -2.219 1 1 C GLN 0.630 1 ATOM 153 C CB . GLN 331 331 ? A 20.807 110.547 -3.945 1 1 C GLN 0.630 1 ATOM 154 C CG . GLN 331 331 ? A 21.960 109.557 -4.242 1 1 C GLN 0.630 1 ATOM 155 C CD . GLN 331 331 ? A 22.887 110.072 -5.343 1 1 C GLN 0.630 1 ATOM 156 O OE1 . GLN 331 331 ? A 22.520 110.265 -6.492 1 1 C GLN 0.630 1 ATOM 157 N NE2 . GLN 331 331 ? A 24.187 110.264 -4.993 1 1 C GLN 0.630 1 ATOM 158 O OXT . GLN 331 331 ? A 19.380 113.059 -4.431 1 1 C GLN 0.630 1 # # loop_ _atom_type.symbol C N O # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.682 2 1 3 0.038 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 313 LEU 1 0.610 2 1 A 314 GLY 1 0.710 3 1 A 315 LEU 1 0.820 4 1 A 316 THR 1 0.860 5 1 A 317 ASP 1 0.810 6 1 A 318 LEU 1 0.800 7 1 A 319 GLU 1 0.700 8 1 A 320 LEU 1 0.780 9 1 A 321 ALA 1 0.620 10 1 A 322 GLN 1 0.540 11 1 A 323 GLN 1 0.530 12 1 A 324 LEU 1 0.640 13 1 A 325 GLN 1 0.550 14 1 A 326 GLN 1 0.570 15 1 A 327 GLU 1 0.640 16 1 A 328 GLU 1 0.690 17 1 A 329 TYR 1 0.800 18 1 A 330 GLN 1 0.650 19 1 A 331 GLN 1 0.630 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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