data_SMR-9f95456b23b57f06f13bb83e402a6a9d_3 _entry.id SMR-9f95456b23b57f06f13bb83e402a6a9d_3 _struct.entry_id SMR-9f95456b23b57f06f13bb83e402a6a9d_3 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q9D842 (isoform 2)/ APLF_MOUSE, Aprataxin and PNK-like factor Estimated model accuracy of this model is 0.051, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q9D842 (isoform 2)' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 50131.427 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP APLF_MOUSE Q9D842 1 ;MECTLRNSQMLDEDDILSEMQKSPVVNLPDKTTGASQLQGSPEITKTKCPTIDPMSSSGECRAFSEHQPR PTQRKRILPAWMLAESLSDQSLSTPAEGGDKDVIQRSGKAGTCEDRTPGNTSWHGKKRLSPSGNSKSVSA EQDPGKKCRKADQEGPGVSSENVPESSSSNIVKDPDVDIVKTNKQKDGILIEELGEVSKHKAATKPTTNE EGESCARVQSKSPPEKSQGCHPESSSAPSSPDALHTDTADPVLGCSEESKVRRTACMYGANCYRRNPLHF QHFSHPGDSDYGEVHGTDEGVIGDRPECPYGASCYRKNPQHKMEYRHSALPARVALDEDDDDVGQPSDDE DEEDYEPTDEDSDWHPGKDDEEQEDVDELLKEAKRFMRRKK ; 'Aprataxin and PNK-like factor' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 391 1 391 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . APLF_MOUSE Q9D842 Q9D842-2 1 391 10090 'Mus musculus (Mouse)' 2005-08-16 D666D7635D0AFF78 # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no J ;MECTLRNSQMLDEDDILSEMQKSPVVNLPDKTTGASQLQGSPEITKTKCPTIDPMSSSGECRAFSEHQPR PTQRKRILPAWMLAESLSDQSLSTPAEGGDKDVIQRSGKAGTCEDRTPGNTSWHGKKRLSPSGNSKSVSA EQDPGKKCRKADQEGPGVSSENVPESSSSNIVKDPDVDIVKTNKQKDGILIEELGEVSKHKAATKPTTNE EGESCARVQSKSPPEKSQGCHPESSSAPSSPDALHTDTADPVLGCSEESKVRRTACMYGANCYRRNPLHF QHFSHPGDSDYGEVHGTDEGVIGDRPECPYGASCYRKNPQHKMEYRHSALPARVALDEDDDDVGQPSDDE DEEDYEPTDEDSDWHPGKDDEEQEDVDELLKEAKRFMRRKK ; ;MECTLRNSQMLDEDDILSEMQKSPVVNLPDKTTGASQLQGSPEITKTKCPTIDPMSSSGECRAFSEHQPR PTQRKRILPAWMLAESLSDQSLSTPAEGGDKDVIQRSGKAGTCEDRTPGNTSWHGKKRLSPSGNSKSVSA EQDPGKKCRKADQEGPGVSSENVPESSSSNIVKDPDVDIVKTNKQKDGILIEELGEVSKHKAATKPTTNE EGESCARVQSKSPPEKSQGCHPESSSAPSSPDALHTDTADPVLGCSEESKVRRTACMYGANCYRRNPLHF QHFSHPGDSDYGEVHGTDEGVIGDRPECPYGASCYRKNPQHKMEYRHSALPARVALDEDDDDVGQPSDDE DEEDYEPTDEDSDWHPGKDDEEQEDVDELLKEAKRFMRRKK ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 GLU . 1 3 CYS . 1 4 THR . 1 5 LEU . 1 6 ARG . 1 7 ASN . 1 8 SER . 1 9 GLN . 1 10 MET . 1 11 LEU . 1 12 ASP . 1 13 GLU . 1 14 ASP . 1 15 ASP . 1 16 ILE . 1 17 LEU . 1 18 SER . 1 19 GLU . 1 20 MET . 1 21 GLN . 1 22 LYS . 1 23 SER . 1 24 PRO . 1 25 VAL . 1 26 VAL . 1 27 ASN . 1 28 LEU . 1 29 PRO . 1 30 ASP . 1 31 LYS . 1 32 THR . 1 33 THR . 1 34 GLY . 1 35 ALA . 1 36 SER . 1 37 GLN . 1 38 LEU . 1 39 GLN . 1 40 GLY . 1 41 SER . 1 42 PRO . 1 43 GLU . 1 44 ILE . 1 45 THR . 1 46 LYS . 1 47 THR . 1 48 LYS . 1 49 CYS . 1 50 PRO . 1 51 THR . 1 52 ILE . 1 53 ASP . 1 54 PRO . 1 55 MET . 1 56 SER . 1 57 SER . 1 58 SER . 1 59 GLY . 1 60 GLU . 1 61 CYS . 1 62 ARG . 1 63 ALA . 1 64 PHE . 1 65 SER . 1 66 GLU . 1 67 HIS . 1 68 GLN . 1 69 PRO . 1 70 ARG . 1 71 PRO . 1 72 THR . 1 73 GLN . 1 74 ARG . 1 75 LYS . 1 76 ARG . 1 77 ILE . 1 78 LEU . 1 79 PRO . 1 80 ALA . 1 81 TRP . 1 82 MET . 1 83 LEU . 1 84 ALA . 1 85 GLU . 1 86 SER . 1 87 LEU . 1 88 SER . 1 89 ASP . 1 90 GLN . 1 91 SER . 1 92 LEU . 1 93 SER . 1 94 THR . 1 95 PRO . 1 96 ALA . 1 97 GLU . 1 98 GLY . 1 99 GLY . 1 100 ASP . 1 101 LYS . 1 102 ASP . 1 103 VAL . 1 104 ILE . 1 105 GLN . 1 106 ARG . 1 107 SER . 1 108 GLY . 1 109 LYS . 1 110 ALA . 1 111 GLY . 1 112 THR . 1 113 CYS . 1 114 GLU . 1 115 ASP . 1 116 ARG . 1 117 THR . 1 118 PRO . 1 119 GLY . 1 120 ASN . 1 121 THR . 1 122 SER . 1 123 TRP . 1 124 HIS . 1 125 GLY . 1 126 LYS . 1 127 LYS . 1 128 ARG . 1 129 LEU . 1 130 SER . 1 131 PRO . 1 132 SER . 1 133 GLY . 1 134 ASN . 1 135 SER . 1 136 LYS . 1 137 SER . 1 138 VAL . 1 139 SER . 1 140 ALA . 1 141 GLU . 1 142 GLN . 1 143 ASP . 1 144 PRO . 1 145 GLY . 1 146 LYS . 1 147 LYS . 1 148 CYS . 1 149 ARG . 1 150 LYS . 1 151 ALA . 1 152 ASP . 1 153 GLN . 1 154 GLU . 1 155 GLY . 1 156 PRO . 1 157 GLY . 1 158 VAL . 1 159 SER . 1 160 SER . 1 161 GLU . 1 162 ASN . 1 163 VAL . 1 164 PRO . 1 165 GLU . 1 166 SER . 1 167 SER . 1 168 SER . 1 169 SER . 1 170 ASN . 1 171 ILE . 1 172 VAL . 1 173 LYS . 1 174 ASP . 1 175 PRO . 1 176 ASP . 1 177 VAL . 1 178 ASP . 1 179 ILE . 1 180 VAL . 1 181 LYS . 1 182 THR . 1 183 ASN . 1 184 LYS . 1 185 GLN . 1 186 LYS . 1 187 ASP . 1 188 GLY . 1 189 ILE . 1 190 LEU . 1 191 ILE . 1 192 GLU . 1 193 GLU . 1 194 LEU . 1 195 GLY . 1 196 GLU . 1 197 VAL . 1 198 SER . 1 199 LYS . 1 200 HIS . 1 201 LYS . 1 202 ALA . 1 203 ALA . 1 204 THR . 1 205 LYS . 1 206 PRO . 1 207 THR . 1 208 THR . 1 209 ASN . 1 210 GLU . 1 211 GLU . 1 212 GLY . 1 213 GLU . 1 214 SER . 1 215 CYS . 1 216 ALA . 1 217 ARG . 1 218 VAL . 1 219 GLN . 1 220 SER . 1 221 LYS . 1 222 SER . 1 223 PRO . 1 224 PRO . 1 225 GLU . 1 226 LYS . 1 227 SER . 1 228 GLN . 1 229 GLY . 1 230 CYS . 1 231 HIS . 1 232 PRO . 1 233 GLU . 1 234 SER . 1 235 SER . 1 236 SER . 1 237 ALA . 1 238 PRO . 1 239 SER . 1 240 SER . 1 241 PRO . 1 242 ASP . 1 243 ALA . 1 244 LEU . 1 245 HIS . 1 246 THR . 1 247 ASP . 1 248 THR . 1 249 ALA . 1 250 ASP . 1 251 PRO . 1 252 VAL . 1 253 LEU . 1 254 GLY . 1 255 CYS . 1 256 SER . 1 257 GLU . 1 258 GLU . 1 259 SER . 1 260 LYS . 1 261 VAL . 1 262 ARG . 1 263 ARG . 1 264 THR . 1 265 ALA . 1 266 CYS . 1 267 MET . 1 268 TYR . 1 269 GLY . 1 270 ALA . 1 271 ASN . 1 272 CYS . 1 273 TYR . 1 274 ARG . 1 275 ARG . 1 276 ASN . 1 277 PRO . 1 278 LEU . 1 279 HIS . 1 280 PHE . 1 281 GLN . 1 282 HIS . 1 283 PHE . 1 284 SER . 1 285 HIS . 1 286 PRO . 1 287 GLY . 1 288 ASP . 1 289 SER . 1 290 ASP . 1 291 TYR . 1 292 GLY . 1 293 GLU . 1 294 VAL . 1 295 HIS . 1 296 GLY . 1 297 THR . 1 298 ASP . 1 299 GLU . 1 300 GLY . 1 301 VAL . 1 302 ILE . 1 303 GLY . 1 304 ASP . 1 305 ARG . 1 306 PRO . 1 307 GLU . 1 308 CYS . 1 309 PRO . 1 310 TYR . 1 311 GLY . 1 312 ALA . 1 313 SER . 1 314 CYS . 1 315 TYR . 1 316 ARG . 1 317 LYS . 1 318 ASN . 1 319 PRO . 1 320 GLN . 1 321 HIS . 1 322 LYS . 1 323 MET . 1 324 GLU . 1 325 TYR . 1 326 ARG . 1 327 HIS . 1 328 SER . 1 329 ALA . 1 330 LEU . 1 331 PRO . 1 332 ALA . 1 333 ARG . 1 334 VAL . 1 335 ALA . 1 336 LEU . 1 337 ASP . 1 338 GLU . 1 339 ASP . 1 340 ASP . 1 341 ASP . 1 342 ASP . 1 343 VAL . 1 344 GLY . 1 345 GLN . 1 346 PRO . 1 347 SER . 1 348 ASP . 1 349 ASP . 1 350 GLU . 1 351 ASP . 1 352 GLU . 1 353 GLU . 1 354 ASP . 1 355 TYR . 1 356 GLU . 1 357 PRO . 1 358 THR . 1 359 ASP . 1 360 GLU . 1 361 ASP . 1 362 SER . 1 363 ASP . 1 364 TRP . 1 365 HIS . 1 366 PRO . 1 367 GLY . 1 368 LYS . 1 369 ASP . 1 370 ASP . 1 371 GLU . 1 372 GLU . 1 373 GLN . 1 374 GLU . 1 375 ASP . 1 376 VAL . 1 377 ASP . 1 378 GLU . 1 379 LEU . 1 380 LEU . 1 381 LYS . 1 382 GLU . 1 383 ALA . 1 384 LYS . 1 385 ARG . 1 386 PHE . 1 387 MET . 1 388 ARG . 1 389 ARG . 1 390 LYS . 1 391 LYS . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? J . A 1 2 GLU 2 ? ? ? J . A 1 3 CYS 3 ? ? ? J . A 1 4 THR 4 ? ? ? J . A 1 5 LEU 5 ? ? ? J . A 1 6 ARG 6 ? ? ? J . A 1 7 ASN 7 ? ? ? J . A 1 8 SER 8 ? ? ? J . A 1 9 GLN 9 ? ? ? J . A 1 10 MET 10 ? ? ? J . A 1 11 LEU 11 ? ? ? J . A 1 12 ASP 12 ? ? ? J . A 1 13 GLU 13 ? ? ? J . A 1 14 ASP 14 ? ? ? J . A 1 15 ASP 15 ? ? ? J . A 1 16 ILE 16 ? ? ? J . A 1 17 LEU 17 ? ? ? J . A 1 18 SER 18 ? ? ? J . A 1 19 GLU 19 ? ? ? J . A 1 20 MET 20 ? ? ? J . A 1 21 GLN 21 ? ? ? J . A 1 22 LYS 22 ? ? ? J . A 1 23 SER 23 ? ? ? J . A 1 24 PRO 24 ? ? ? J . A 1 25 VAL 25 ? ? ? J . A 1 26 VAL 26 ? ? ? J . A 1 27 ASN 27 ? ? ? J . A 1 28 LEU 28 ? ? ? J . A 1 29 PRO 29 ? ? ? J . A 1 30 ASP 30 ? ? ? J . A 1 31 LYS 31 ? ? ? J . A 1 32 THR 32 ? ? ? J . A 1 33 THR 33 ? ? ? J . A 1 34 GLY 34 ? ? ? J . A 1 35 ALA 35 ? ? ? J . A 1 36 SER 36 ? ? ? J . A 1 37 GLN 37 ? ? ? J . A 1 38 LEU 38 ? ? ? J . A 1 39 GLN 39 ? ? ? J . A 1 40 GLY 40 ? ? ? J . A 1 41 SER 41 ? ? ? J . A 1 42 PRO 42 ? ? ? J . A 1 43 GLU 43 ? ? ? J . A 1 44 ILE 44 ? ? ? J . A 1 45 THR 45 ? ? ? J . A 1 46 LYS 46 ? ? ? J . A 1 47 THR 47 ? ? ? J . A 1 48 LYS 48 ? ? ? J . A 1 49 CYS 49 ? ? ? J . A 1 50 PRO 50 ? ? ? J . A 1 51 THR 51 ? ? ? J . A 1 52 ILE 52 ? ? ? J . A 1 53 ASP 53 ? ? ? J . A 1 54 PRO 54 ? ? ? J . A 1 55 MET 55 ? ? ? J . A 1 56 SER 56 ? ? ? J . A 1 57 SER 57 ? ? ? J . A 1 58 SER 58 ? ? ? J . A 1 59 GLY 59 ? ? ? J . A 1 60 GLU 60 ? ? ? J . A 1 61 CYS 61 ? ? ? J . A 1 62 ARG 62 ? ? ? J . A 1 63 ALA 63 ? ? ? J . A 1 64 PHE 64 ? ? ? J . A 1 65 SER 65 ? ? ? J . A 1 66 GLU 66 ? ? ? J . A 1 67 HIS 67 ? ? ? J . A 1 68 GLN 68 ? ? ? J . A 1 69 PRO 69 ? ? ? J . A 1 70 ARG 70 ? ? ? J . A 1 71 PRO 71 ? ? ? J . A 1 72 THR 72 ? ? ? J . A 1 73 GLN 73 ? ? ? J . A 1 74 ARG 74 ? ? ? J . A 1 75 LYS 75 ? ? ? J . A 1 76 ARG 76 ? ? ? J . A 1 77 ILE 77 ? ? ? J . A 1 78 LEU 78 ? ? ? J . A 1 79 PRO 79 ? ? ? J . A 1 80 ALA 80 ? ? ? J . A 1 81 TRP 81 ? ? ? J . A 1 82 MET 82 ? ? ? J . A 1 83 LEU 83 ? ? ? J . A 1 84 ALA 84 ? ? ? J . A 1 85 GLU 85 ? ? ? J . A 1 86 SER 86 ? ? ? J . A 1 87 LEU 87 ? ? ? J . A 1 88 SER 88 ? ? ? J . A 1 89 ASP 89 ? ? ? J . A 1 90 GLN 90 ? ? ? J . A 1 91 SER 91 ? ? ? J . A 1 92 LEU 92 ? ? ? J . A 1 93 SER 93 ? ? ? J . A 1 94 THR 94 ? ? ? J . A 1 95 PRO 95 ? ? ? J . A 1 96 ALA 96 ? ? ? J . A 1 97 GLU 97 ? ? ? J . A 1 98 GLY 98 ? ? ? J . A 1 99 GLY 99 ? ? ? J . A 1 100 ASP 100 ? ? ? J . A 1 101 LYS 101 ? ? ? J . A 1 102 ASP 102 ? ? ? J . A 1 103 VAL 103 ? ? ? J . A 1 104 ILE 104 ? ? ? J . A 1 105 GLN 105 ? ? ? J . A 1 106 ARG 106 ? ? ? J . A 1 107 SER 107 ? ? ? J . A 1 108 GLY 108 ? ? ? J . A 1 109 LYS 109 ? ? ? J . A 1 110 ALA 110 ? ? ? J . A 1 111 GLY 111 ? ? ? J . A 1 112 THR 112 ? ? ? J . A 1 113 CYS 113 ? ? ? J . A 1 114 GLU 114 ? ? ? J . A 1 115 ASP 115 ? ? ? J . A 1 116 ARG 116 ? ? ? J . A 1 117 THR 117 ? ? ? J . A 1 118 PRO 118 ? ? ? J . A 1 119 GLY 119 ? ? ? J . A 1 120 ASN 120 ? ? ? J . A 1 121 THR 121 ? ? ? J . A 1 122 SER 122 ? ? ? J . A 1 123 TRP 123 ? ? ? J . A 1 124 HIS 124 ? ? ? J . A 1 125 GLY 125 ? ? ? J . A 1 126 LYS 126 ? ? ? J . A 1 127 LYS 127 ? ? ? J . A 1 128 ARG 128 ? ? ? J . A 1 129 LEU 129 ? ? ? J . A 1 130 SER 130 ? ? ? J . A 1 131 PRO 131 ? ? ? J . A 1 132 SER 132 ? ? ? J . A 1 133 GLY 133 ? ? ? J . A 1 134 ASN 134 ? ? ? J . A 1 135 SER 135 ? ? ? J . A 1 136 LYS 136 ? ? ? J . A 1 137 SER 137 ? ? ? J . A 1 138 VAL 138 ? ? ? J . A 1 139 SER 139 ? ? ? J . A 1 140 ALA 140 ? ? ? J . A 1 141 GLU 141 ? ? ? J . A 1 142 GLN 142 ? ? ? J . A 1 143 ASP 143 ? ? ? J . A 1 144 PRO 144 ? ? ? J . A 1 145 GLY 145 ? ? ? J . A 1 146 LYS 146 ? ? ? J . A 1 147 LYS 147 ? ? ? J . A 1 148 CYS 148 ? ? ? J . A 1 149 ARG 149 ? ? ? J . A 1 150 LYS 150 ? ? ? J . A 1 151 ALA 151 ? ? ? J . A 1 152 ASP 152 ? ? ? J . A 1 153 GLN 153 ? ? ? J . A 1 154 GLU 154 ? ? ? J . A 1 155 GLY 155 ? ? ? J . A 1 156 PRO 156 ? ? ? J . A 1 157 GLY 157 ? ? ? J . A 1 158 VAL 158 ? ? ? J . A 1 159 SER 159 ? ? ? J . A 1 160 SER 160 ? ? ? J . A 1 161 GLU 161 ? ? ? J . A 1 162 ASN 162 ? ? ? J . A 1 163 VAL 163 ? ? ? J . A 1 164 PRO 164 ? ? ? J . A 1 165 GLU 165 ? ? ? J . A 1 166 SER 166 ? ? ? J . A 1 167 SER 167 ? ? ? J . A 1 168 SER 168 ? ? ? J . A 1 169 SER 169 ? ? ? J . A 1 170 ASN 170 ? ? ? J . A 1 171 ILE 171 ? ? ? J . A 1 172 VAL 172 ? ? ? J . A 1 173 LYS 173 ? ? ? J . A 1 174 ASP 174 ? ? ? J . A 1 175 PRO 175 ? ? ? J . A 1 176 ASP 176 ? ? ? J . A 1 177 VAL 177 ? ? ? J . A 1 178 ASP 178 ? ? ? J . A 1 179 ILE 179 ? ? ? J . A 1 180 VAL 180 ? ? ? J . A 1 181 LYS 181 ? ? ? J . A 1 182 THR 182 ? ? ? J . A 1 183 ASN 183 ? ? ? J . A 1 184 LYS 184 ? ? ? J . A 1 185 GLN 185 ? ? ? J . A 1 186 LYS 186 ? ? ? J . A 1 187 ASP 187 ? ? ? J . A 1 188 GLY 188 ? ? ? J . A 1 189 ILE 189 ? ? ? J . A 1 190 LEU 190 ? ? ? J . A 1 191 ILE 191 ? ? ? J . A 1 192 GLU 192 ? ? ? J . A 1 193 GLU 193 ? ? ? J . A 1 194 LEU 194 ? ? ? J . A 1 195 GLY 195 ? ? ? J . A 1 196 GLU 196 ? ? ? J . A 1 197 VAL 197 ? ? ? J . A 1 198 SER 198 ? ? ? J . A 1 199 LYS 199 ? ? ? J . A 1 200 HIS 200 ? ? ? J . A 1 201 LYS 201 ? ? ? J . A 1 202 ALA 202 ? ? ? J . A 1 203 ALA 203 ? ? ? J . A 1 204 THR 204 ? ? ? J . A 1 205 LYS 205 ? ? ? J . A 1 206 PRO 206 ? ? ? J . A 1 207 THR 207 ? ? ? J . A 1 208 THR 208 ? ? ? J . A 1 209 ASN 209 ? ? ? J . A 1 210 GLU 210 ? ? ? J . A 1 211 GLU 211 ? ? ? J . A 1 212 GLY 212 ? ? ? J . A 1 213 GLU 213 ? ? ? J . A 1 214 SER 214 ? ? ? J . A 1 215 CYS 215 ? ? ? J . A 1 216 ALA 216 ? ? ? J . A 1 217 ARG 217 ? ? ? J . A 1 218 VAL 218 ? ? ? J . A 1 219 GLN 219 ? ? ? J . A 1 220 SER 220 ? ? ? J . A 1 221 LYS 221 ? ? ? J . A 1 222 SER 222 ? ? ? J . A 1 223 PRO 223 ? ? ? J . A 1 224 PRO 224 ? ? ? J . A 1 225 GLU 225 ? ? ? J . A 1 226 LYS 226 ? ? ? J . A 1 227 SER 227 ? ? ? J . A 1 228 GLN 228 ? ? ? J . A 1 229 GLY 229 ? ? ? J . A 1 230 CYS 230 ? ? ? J . A 1 231 HIS 231 ? ? ? J . A 1 232 PRO 232 ? ? ? J . A 1 233 GLU 233 ? ? ? J . A 1 234 SER 234 ? ? ? J . A 1 235 SER 235 ? ? ? J . A 1 236 SER 236 ? ? ? J . A 1 237 ALA 237 ? ? ? J . A 1 238 PRO 238 ? ? ? J . A 1 239 SER 239 ? ? ? J . A 1 240 SER 240 ? ? ? J . A 1 241 PRO 241 ? ? ? J . A 1 242 ASP 242 ? ? ? J . A 1 243 ALA 243 ? ? ? J . A 1 244 LEU 244 ? ? ? J . A 1 245 HIS 245 ? ? ? J . A 1 246 THR 246 ? ? ? J . A 1 247 ASP 247 ? ? ? J . A 1 248 THR 248 ? ? ? J . A 1 249 ALA 249 ? ? ? J . A 1 250 ASP 250 ? ? ? J . A 1 251 PRO 251 ? ? ? J . A 1 252 VAL 252 ? ? ? J . A 1 253 LEU 253 ? ? ? J . A 1 254 GLY 254 ? ? ? J . A 1 255 CYS 255 ? ? ? J . A 1 256 SER 256 ? ? ? J . A 1 257 GLU 257 ? ? ? J . A 1 258 GLU 258 ? ? ? J . A 1 259 SER 259 ? ? ? J . A 1 260 LYS 260 ? ? ? J . A 1 261 VAL 261 ? ? ? J . A 1 262 ARG 262 ? ? ? J . A 1 263 ARG 263 ? ? ? J . A 1 264 THR 264 ? ? ? J . A 1 265 ALA 265 ? ? ? J . A 1 266 CYS 266 ? ? ? J . A 1 267 MET 267 ? ? ? J . A 1 268 TYR 268 ? ? ? J . A 1 269 GLY 269 ? ? ? J . A 1 270 ALA 270 ? ? ? J . A 1 271 ASN 271 ? ? ? J . A 1 272 CYS 272 ? ? ? J . A 1 273 TYR 273 ? ? ? J . A 1 274 ARG 274 ? ? ? J . A 1 275 ARG 275 ? ? ? J . A 1 276 ASN 276 ? ? ? J . A 1 277 PRO 277 ? ? ? J . A 1 278 LEU 278 ? ? ? J . A 1 279 HIS 279 ? ? ? J . A 1 280 PHE 280 ? ? ? J . A 1 281 GLN 281 ? ? ? J . A 1 282 HIS 282 ? ? ? J . A 1 283 PHE 283 ? ? ? J . A 1 284 SER 284 ? ? ? J . A 1 285 HIS 285 ? ? ? J . A 1 286 PRO 286 ? ? ? J . A 1 287 GLY 287 ? ? ? J . A 1 288 ASP 288 ? ? ? J . A 1 289 SER 289 ? ? ? J . A 1 290 ASP 290 ? ? ? J . A 1 291 TYR 291 ? ? ? J . A 1 292 GLY 292 ? ? ? J . A 1 293 GLU 293 ? ? ? J . A 1 294 VAL 294 ? ? ? J . A 1 295 HIS 295 ? ? ? J . A 1 296 GLY 296 ? ? ? J . A 1 297 THR 297 ? ? ? J . A 1 298 ASP 298 ? ? ? J . A 1 299 GLU 299 ? ? ? J . A 1 300 GLY 300 ? ? ? J . A 1 301 VAL 301 ? ? ? J . A 1 302 ILE 302 ? ? ? J . A 1 303 GLY 303 ? ? ? J . A 1 304 ASP 304 ? ? ? J . A 1 305 ARG 305 ? ? ? J . A 1 306 PRO 306 ? ? ? J . A 1 307 GLU 307 ? ? ? J . A 1 308 CYS 308 ? ? ? J . A 1 309 PRO 309 ? ? ? J . A 1 310 TYR 310 ? ? ? J . A 1 311 GLY 311 ? ? ? J . A 1 312 ALA 312 ? ? ? J . A 1 313 SER 313 ? ? ? J . A 1 314 CYS 314 ? ? ? J . A 1 315 TYR 315 ? ? ? J . A 1 316 ARG 316 ? ? ? J . A 1 317 LYS 317 ? ? ? J . A 1 318 ASN 318 ? ? ? J . A 1 319 PRO 319 ? ? ? J . A 1 320 GLN 320 ? ? ? J . A 1 321 HIS 321 ? ? ? J . A 1 322 LYS 322 ? ? ? J . A 1 323 MET 323 ? ? ? J . A 1 324 GLU 324 ? ? ? J . A 1 325 TYR 325 ? ? ? J . A 1 326 ARG 326 ? ? ? J . A 1 327 HIS 327 ? ? ? J . A 1 328 SER 328 ? ? ? J . A 1 329 ALA 329 ? ? ? J . A 1 330 LEU 330 ? ? ? J . A 1 331 PRO 331 ? ? ? J . A 1 332 ALA 332 ? ? ? J . A 1 333 ARG 333 ? ? ? J . A 1 334 VAL 334 ? ? ? J . A 1 335 ALA 335 ? ? ? J . A 1 336 LEU 336 ? ? ? J . A 1 337 ASP 337 ? ? ? J . A 1 338 GLU 338 ? ? ? J . A 1 339 ASP 339 ? ? ? J . A 1 340 ASP 340 ? ? ? J . A 1 341 ASP 341 ? ? ? J . A 1 342 ASP 342 ? ? ? J . A 1 343 VAL 343 ? ? ? J . A 1 344 GLY 344 ? ? ? J . A 1 345 GLN 345 ? ? ? J . A 1 346 PRO 346 346 PRO PRO J . A 1 347 SER 347 347 SER SER J . A 1 348 ASP 348 348 ASP ASP J . A 1 349 ASP 349 349 ASP ASP J . A 1 350 GLU 350 350 GLU GLU J . A 1 351 ASP 351 351 ASP ASP J . A 1 352 GLU 352 352 GLU GLU J . A 1 353 GLU 353 353 GLU GLU J . A 1 354 ASP 354 354 ASP ASP J . A 1 355 TYR 355 355 TYR TYR J . A 1 356 GLU 356 356 GLU GLU J . A 1 357 PRO 357 357 PRO PRO J . A 1 358 THR 358 358 THR THR J . A 1 359 ASP 359 359 ASP ASP J . A 1 360 GLU 360 360 GLU GLU J . A 1 361 ASP 361 361 ASP ASP J . A 1 362 SER 362 362 SER SER J . A 1 363 ASP 363 363 ASP ASP J . A 1 364 TRP 364 364 TRP TRP J . A 1 365 HIS 365 365 HIS HIS J . A 1 366 PRO 366 366 PRO PRO J . A 1 367 GLY 367 ? ? ? J . A 1 368 LYS 368 ? ? ? J . A 1 369 ASP 369 ? ? ? J . A 1 370 ASP 370 ? ? ? J . A 1 371 GLU 371 ? ? ? J . A 1 372 GLU 372 ? ? ? J . A 1 373 GLN 373 ? ? ? J . A 1 374 GLU 374 ? ? ? J . A 1 375 ASP 375 ? ? ? J . A 1 376 VAL 376 ? ? ? J . A 1 377 ASP 377 ? ? ? J . A 1 378 GLU 378 ? ? ? J . A 1 379 LEU 379 ? ? ? J . A 1 380 LEU 380 ? ? ? J . A 1 381 LYS 381 ? ? ? J . A 1 382 GLU 382 ? ? ? J . A 1 383 ALA 383 ? ? ? J . A 1 384 LYS 384 ? ? ? J . A 1 385 ARG 385 ? ? ? J . A 1 386 PHE 386 ? ? ? J . A 1 387 MET 387 ? ? ? J . A 1 388 ARG 388 ? ? ? J . A 1 389 ARG 389 ? ? ? J . A 1 390 LYS 390 ? ? ? J . A 1 391 LYS 391 ? ? ? J . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Aprataxin and PNK-like factor {PDB ID=6yn1, label_asym_id=J, auth_asym_id=J, SMTL ID=6yn1.1.J}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 6yn1, label_asym_id=J' 'target-template alignment' . 4 'model 3' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-11 6 PDB https://www.wwpdb.org . 2024-12-06 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A J 5 1 J # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 GLDEDNDNVGQPNEYDLNDSFLDDEEEDYEPTDEDSDWEPGKE GLDEDNDNVGQPNEYDLNDSFLDDEEEDYEPTDEDSDWEPGKE # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 5 42 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 6yn1 2024-01-24 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 391 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 399 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 0.00032 73.333 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MECTLRNSQMLDEDDILSEMQKSPVVNLPDKTTGASQLQGSPEITKTKCPTIDPMSSSGECRAFSEHQPRPTQRKRILPAWMLAESLSDQSLSTPAEGGDKDVIQRSGKAGTCEDRTPGNTSWHGKKRLSPSGNSKSVSAEQDPGKKCRKADQEGPGVSSENVPESSSSNIVKDPDVDIVKTNKQKDGILIEELGEVSKHKAATKPTTNEEGESCARVQSKSPPEKSQGCHPESSSAPSSPDALHTDTADPVLGCSEESKVRRTACMYGANCYRRNPLHFQHFSHPGDSDYGEVHGTDEGVIGDRPECPYGASCYRKNPQHKMEYRHSALPARVALDEDDDDVGQPSDDE--------DEEDYEPTDEDSDWHPGKDDEEQEDVDELLKEAKRFMRRKK 2 1 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNDNVGQPNEYDLNDSFLDDEEEDYEPTDEDSDWEPGK----------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 6yn1.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 3' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . PRO 346 346 ? A 65.656 7.218 87.992 1 1 J PRO 0.430 1 ATOM 2 C CA . PRO 346 346 ? A 66.079 5.968 87.295 1 1 J PRO 0.430 1 ATOM 3 C C . PRO 346 346 ? A 64.901 5.025 87.338 1 1 J PRO 0.430 1 ATOM 4 O O . PRO 346 346 ? A 64.309 4.855 88.393 1 1 J PRO 0.430 1 ATOM 5 C CB . PRO 346 346 ? A 67.328 5.529 88.084 1 1 J PRO 0.430 1 ATOM 6 C CG . PRO 346 346 ? A 67.236 6.178 89.485 1 1 J PRO 0.430 1 ATOM 7 C CD . PRO 346 346 ? A 66.016 7.101 89.451 1 1 J PRO 0.430 1 ATOM 8 N N . SER 347 347 ? A 64.509 4.460 86.184 1 1 J SER 0.470 1 ATOM 9 C CA . SER 347 347 ? A 63.376 3.557 86.075 1 1 J SER 0.470 1 ATOM 10 C C . SER 347 347 ? A 63.878 2.162 85.817 1 1 J SER 0.470 1 ATOM 11 O O . SER 347 347 ? A 63.852 1.706 84.681 1 1 J SER 0.470 1 ATOM 12 C CB . SER 347 347 ? A 62.441 3.950 84.901 1 1 J SER 0.470 1 ATOM 13 O OG . SER 347 347 ? A 61.938 5.270 85.117 1 1 J SER 0.470 1 ATOM 14 N N . ASP 348 348 ? A 64.366 1.477 86.867 1 1 J ASP 0.540 1 ATOM 15 C CA . ASP 348 348 ? A 64.896 0.141 86.804 1 1 J ASP 0.540 1 ATOM 16 C C . ASP 348 348 ? A 64.203 -0.686 87.885 1 1 J ASP 0.540 1 ATOM 17 O O . ASP 348 348 ? A 63.442 -0.164 88.694 1 1 J ASP 0.540 1 ATOM 18 C CB . ASP 348 348 ? A 66.462 0.170 86.928 1 1 J ASP 0.540 1 ATOM 19 C CG . ASP 348 348 ? A 67.044 0.937 88.121 1 1 J ASP 0.540 1 ATOM 20 O OD1 . ASP 348 348 ? A 68.177 1.458 87.956 1 1 J ASP 0.540 1 ATOM 21 O OD2 . ASP 348 348 ? A 66.359 1.095 89.158 1 1 J ASP 0.540 1 ATOM 22 N N . ASP 349 349 ? A 64.412 -2.020 87.860 1 1 J ASP 0.560 1 ATOM 23 C CA . ASP 349 349 ? A 64.154 -2.890 88.989 1 1 J ASP 0.560 1 ATOM 24 C C . ASP 349 349 ? A 65.271 -2.770 90.018 1 1 J ASP 0.560 1 ATOM 25 O O . ASP 349 349 ? A 66.446 -2.649 89.684 1 1 J ASP 0.560 1 ATOM 26 C CB . ASP 349 349 ? A 64.063 -4.377 88.548 1 1 J ASP 0.560 1 ATOM 27 C CG . ASP 349 349 ? A 62.809 -4.626 87.725 1 1 J ASP 0.560 1 ATOM 28 O OD1 . ASP 349 349 ? A 61.871 -3.790 87.799 1 1 J ASP 0.560 1 ATOM 29 O OD2 . ASP 349 349 ? A 62.758 -5.660 87.014 1 1 J ASP 0.560 1 ATOM 30 N N . GLU 350 350 ? A 64.927 -2.878 91.318 1 1 J GLU 0.550 1 ATOM 31 C CA . GLU 350 350 ? A 65.855 -2.783 92.432 1 1 J GLU 0.550 1 ATOM 32 C C . GLU 350 350 ? A 66.511 -4.130 92.720 1 1 J GLU 0.550 1 ATOM 33 O O . GLU 350 350 ? A 66.684 -4.541 93.863 1 1 J GLU 0.550 1 ATOM 34 C CB . GLU 350 350 ? A 65.136 -2.264 93.704 1 1 J GLU 0.550 1 ATOM 35 C CG . GLU 350 350 ? A 64.579 -0.829 93.541 1 1 J GLU 0.550 1 ATOM 36 C CD . GLU 350 350 ? A 63.911 -0.326 94.818 1 1 J GLU 0.550 1 ATOM 37 O OE1 . GLU 350 350 ? A 63.374 -1.168 95.583 1 1 J GLU 0.550 1 ATOM 38 O OE2 . GLU 350 350 ? A 63.925 0.913 95.037 1 1 J GLU 0.550 1 ATOM 39 N N . ASP 351 351 ? A 66.891 -4.861 91.654 1 1 J ASP 0.360 1 ATOM 40 C CA . ASP 351 351 ? A 67.561 -6.137 91.747 1 1 J ASP 0.360 1 ATOM 41 C C . ASP 351 351 ? A 69.007 -5.993 92.192 1 1 J ASP 0.360 1 ATOM 42 O O . ASP 351 351 ? A 69.658 -4.970 92.001 1 1 J ASP 0.360 1 ATOM 43 C CB . ASP 351 351 ? A 67.526 -6.908 90.405 1 1 J ASP 0.360 1 ATOM 44 C CG . ASP 351 351 ? A 66.126 -7.383 90.073 1 1 J ASP 0.360 1 ATOM 45 O OD1 . ASP 351 351 ? A 65.281 -7.474 90.997 1 1 J ASP 0.360 1 ATOM 46 O OD2 . ASP 351 351 ? A 65.937 -7.737 88.884 1 1 J ASP 0.360 1 ATOM 47 N N . GLU 352 352 ? A 69.557 -7.054 92.803 1 1 J GLU 0.420 1 ATOM 48 C CA . GLU 352 352 ? A 70.926 -7.048 93.257 1 1 J GLU 0.420 1 ATOM 49 C C . GLU 352 352 ? A 71.493 -8.418 92.979 1 1 J GLU 0.420 1 ATOM 50 O O . GLU 352 352 ? A 70.862 -9.415 93.313 1 1 J GLU 0.420 1 ATOM 51 C CB . GLU 352 352 ? A 70.989 -6.755 94.772 1 1 J GLU 0.420 1 ATOM 52 C CG . GLU 352 352 ? A 72.430 -6.677 95.329 1 1 J GLU 0.420 1 ATOM 53 C CD . GLU 352 352 ? A 72.479 -6.316 96.811 1 1 J GLU 0.420 1 ATOM 54 O OE1 . GLU 352 352 ? A 71.404 -6.094 97.424 1 1 J GLU 0.420 1 ATOM 55 O OE2 . GLU 352 352 ? A 73.620 -6.253 97.339 1 1 J GLU 0.420 1 ATOM 56 N N . GLU 353 353 ? A 72.667 -8.492 92.313 1 1 J GLU 0.390 1 ATOM 57 C CA . GLU 353 353 ? A 73.298 -9.748 91.952 1 1 J GLU 0.390 1 ATOM 58 C C . GLU 353 353 ? A 74.744 -9.431 91.587 1 1 J GLU 0.390 1 ATOM 59 O O . GLU 353 353 ? A 75.092 -8.264 91.434 1 1 J GLU 0.390 1 ATOM 60 C CB . GLU 353 353 ? A 72.521 -10.455 90.781 1 1 J GLU 0.390 1 ATOM 61 C CG . GLU 353 353 ? A 72.900 -11.915 90.402 1 1 J GLU 0.390 1 ATOM 62 C CD . GLU 353 353 ? A 72.867 -12.825 91.619 1 1 J GLU 0.390 1 ATOM 63 O OE1 . GLU 353 353 ? A 73.828 -12.717 92.418 1 1 J GLU 0.390 1 ATOM 64 O OE2 . GLU 353 353 ? A 71.908 -13.628 91.742 1 1 J GLU 0.390 1 ATOM 65 N N . ASP 354 354 ? A 75.597 -10.469 91.419 1 1 J ASP 0.510 1 ATOM 66 C CA . ASP 354 354 ? A 76.962 -10.411 90.888 1 1 J ASP 0.510 1 ATOM 67 C C . ASP 354 354 ? A 77.076 -9.719 89.521 1 1 J ASP 0.510 1 ATOM 68 O O . ASP 354 354 ? A 78.025 -8.977 89.248 1 1 J ASP 0.510 1 ATOM 69 C CB . ASP 354 354 ? A 77.524 -11.857 90.710 1 1 J ASP 0.510 1 ATOM 70 C CG . ASP 354 354 ? A 77.872 -12.536 92.027 1 1 J ASP 0.510 1 ATOM 71 O OD1 . ASP 354 354 ? A 77.954 -11.838 93.066 1 1 J ASP 0.510 1 ATOM 72 O OD2 . ASP 354 354 ? A 78.158 -13.761 91.963 1 1 J ASP 0.510 1 ATOM 73 N N . TYR 355 355 ? A 76.100 -9.943 88.618 1 1 J TYR 0.580 1 ATOM 74 C CA . TYR 355 355 ? A 76.057 -9.361 87.285 1 1 J TYR 0.580 1 ATOM 75 C C . TYR 355 355 ? A 74.768 -8.588 87.142 1 1 J TYR 0.580 1 ATOM 76 O O . TYR 355 355 ? A 73.717 -9.014 87.608 1 1 J TYR 0.580 1 ATOM 77 C CB . TYR 355 355 ? A 76.112 -10.409 86.136 1 1 J TYR 0.580 1 ATOM 78 C CG . TYR 355 355 ? A 77.408 -11.159 86.193 1 1 J TYR 0.580 1 ATOM 79 C CD1 . TYR 355 355 ? A 78.529 -10.705 85.480 1 1 J TYR 0.580 1 ATOM 80 C CD2 . TYR 355 355 ? A 77.522 -12.317 86.978 1 1 J TYR 0.580 1 ATOM 81 C CE1 . TYR 355 355 ? A 79.734 -11.421 85.524 1 1 J TYR 0.580 1 ATOM 82 C CE2 . TYR 355 355 ? A 78.730 -13.021 87.040 1 1 J TYR 0.580 1 ATOM 83 C CZ . TYR 355 355 ? A 79.829 -12.584 86.294 1 1 J TYR 0.580 1 ATOM 84 O OH . TYR 355 355 ? A 81.030 -13.317 86.311 1 1 J TYR 0.580 1 ATOM 85 N N . GLU 356 356 ? A 74.821 -7.421 86.472 1 1 J GLU 0.460 1 ATOM 86 C CA . GLU 356 356 ? A 73.670 -6.569 86.279 1 1 J GLU 0.460 1 ATOM 87 C C . GLU 356 356 ? A 73.018 -6.857 84.920 1 1 J GLU 0.460 1 ATOM 88 O O . GLU 356 356 ? A 73.693 -6.742 83.893 1 1 J GLU 0.460 1 ATOM 89 C CB . GLU 356 356 ? A 74.083 -5.087 86.383 1 1 J GLU 0.460 1 ATOM 90 C CG . GLU 356 356 ? A 72.896 -4.101 86.275 1 1 J GLU 0.460 1 ATOM 91 C CD . GLU 356 356 ? A 73.353 -2.653 86.426 1 1 J GLU 0.460 1 ATOM 92 O OE1 . GLU 356 356 ? A 74.559 -2.431 86.710 1 1 J GLU 0.460 1 ATOM 93 O OE2 . GLU 356 356 ? A 72.494 -1.759 86.238 1 1 J GLU 0.460 1 ATOM 94 N N . PRO 357 357 ? A 71.748 -7.261 84.817 1 1 J PRO 0.600 1 ATOM 95 C CA . PRO 357 357 ? A 70.953 -7.153 83.593 1 1 J PRO 0.600 1 ATOM 96 C C . PRO 357 357 ? A 70.850 -5.747 83.015 1 1 J PRO 0.600 1 ATOM 97 O O . PRO 357 357 ? A 70.503 -4.829 83.735 1 1 J PRO 0.600 1 ATOM 98 C CB . PRO 357 357 ? A 69.546 -7.644 84.002 1 1 J PRO 0.600 1 ATOM 99 C CG . PRO 357 357 ? A 69.783 -8.485 85.260 1 1 J PRO 0.600 1 ATOM 100 C CD . PRO 357 357 ? A 70.941 -7.746 85.933 1 1 J PRO 0.600 1 ATOM 101 N N . THR 358 358 ? A 71.075 -5.562 81.698 1 1 J THR 0.590 1 ATOM 102 C CA . THR 358 358 ? A 70.757 -4.298 81.041 1 1 J THR 0.590 1 ATOM 103 C C . THR 358 358 ? A 69.568 -4.556 80.147 1 1 J THR 0.590 1 ATOM 104 O O . THR 358 358 ? A 69.292 -5.700 79.806 1 1 J THR 0.590 1 ATOM 105 C CB . THR 358 358 ? A 71.930 -3.689 80.268 1 1 J THR 0.590 1 ATOM 106 O OG1 . THR 358 358 ? A 71.655 -2.354 79.865 1 1 J THR 0.590 1 ATOM 107 C CG2 . THR 358 358 ? A 72.296 -4.478 78.999 1 1 J THR 0.590 1 ATOM 108 N N . ASP 359 359 ? A 68.835 -3.490 79.767 1 1 J ASP 0.580 1 ATOM 109 C CA . ASP 359 359 ? A 67.610 -3.569 78.999 1 1 J ASP 0.580 1 ATOM 110 C C . ASP 359 359 ? A 67.903 -3.445 77.506 1 1 J ASP 0.580 1 ATOM 111 O O . ASP 359 359 ? A 67.036 -3.598 76.644 1 1 J ASP 0.580 1 ATOM 112 C CB . ASP 359 359 ? A 66.728 -2.374 79.446 1 1 J ASP 0.580 1 ATOM 113 C CG . ASP 359 359 ? A 65.265 -2.756 79.343 1 1 J ASP 0.580 1 ATOM 114 O OD1 . ASP 359 359 ? A 64.866 -3.656 80.123 1 1 J ASP 0.580 1 ATOM 115 O OD2 . ASP 359 359 ? A 64.540 -2.144 78.522 1 1 J ASP 0.580 1 ATOM 116 N N . GLU 360 360 ? A 69.165 -3.147 77.143 1 1 J GLU 0.630 1 ATOM 117 C CA . GLU 360 360 ? A 69.534 -2.927 75.762 1 1 J GLU 0.630 1 ATOM 118 C C . GLU 360 360 ? A 69.460 -4.150 74.870 1 1 J GLU 0.630 1 ATOM 119 O O . GLU 360 360 ? A 69.965 -5.225 75.189 1 1 J GLU 0.630 1 ATOM 120 C CB . GLU 360 360 ? A 70.908 -2.236 75.589 1 1 J GLU 0.630 1 ATOM 121 C CG . GLU 360 360 ? A 70.809 -0.698 75.740 1 1 J GLU 0.630 1 ATOM 122 C CD . GLU 360 360 ? A 71.898 0.052 74.975 1 1 J GLU 0.630 1 ATOM 123 O OE1 . GLU 360 360 ? A 72.976 -0.538 74.718 1 1 J GLU 0.630 1 ATOM 124 O OE2 . GLU 360 360 ? A 71.640 1.239 74.648 1 1 J GLU 0.630 1 ATOM 125 N N . ASP 361 361 ? A 68.849 -3.956 73.682 1 1 J ASP 0.690 1 ATOM 126 C CA . ASP 361 361 ? A 68.892 -4.888 72.589 1 1 J ASP 0.690 1 ATOM 127 C C . ASP 361 361 ? A 70.281 -4.883 71.979 1 1 J ASP 0.690 1 ATOM 128 O O . ASP 361 361 ? A 71.062 -3.950 72.142 1 1 J ASP 0.690 1 ATOM 129 C CB . ASP 361 361 ? A 67.820 -4.536 71.516 1 1 J ASP 0.690 1 ATOM 130 C CG . ASP 361 361 ? A 67.216 -5.799 70.927 1 1 J ASP 0.690 1 ATOM 131 O OD1 . ASP 361 361 ? A 67.845 -6.878 71.066 1 1 J ASP 0.690 1 ATOM 132 O OD2 . ASP 361 361 ? A 66.114 -5.686 70.334 1 1 J ASP 0.690 1 ATOM 133 N N . SER 362 362 ? A 70.632 -5.941 71.252 1 1 J SER 0.720 1 ATOM 134 C CA . SER 362 362 ? A 71.920 -5.968 70.601 1 1 J SER 0.720 1 ATOM 135 C C . SER 362 362 ? A 71.764 -6.746 69.342 1 1 J SER 0.720 1 ATOM 136 O O . SER 362 362 ? A 70.845 -7.540 69.176 1 1 J SER 0.720 1 ATOM 137 C CB . SER 362 362 ? A 73.112 -6.495 71.478 1 1 J SER 0.720 1 ATOM 138 O OG . SER 362 362 ? A 73.156 -7.917 71.651 1 1 J SER 0.720 1 ATOM 139 N N . ASP 363 363 ? A 72.647 -6.505 68.365 1 1 J ASP 0.690 1 ATOM 140 C CA . ASP 363 363 ? A 72.656 -7.305 67.181 1 1 J ASP 0.690 1 ATOM 141 C C . ASP 363 363 ? A 72.976 -8.780 67.443 1 1 J ASP 0.690 1 ATOM 142 O O . ASP 363 363 ? A 73.995 -9.140 68.030 1 1 J ASP 0.690 1 ATOM 143 C CB . ASP 363 363 ? A 73.723 -6.793 66.206 1 1 J ASP 0.690 1 ATOM 144 C CG . ASP 363 363 ? A 73.532 -5.382 65.689 1 1 J ASP 0.690 1 ATOM 145 O OD1 . ASP 363 363 ? A 73.312 -4.449 66.499 1 1 J ASP 0.690 1 ATOM 146 O OD2 . ASP 363 363 ? A 73.707 -5.240 64.451 1 1 J ASP 0.690 1 ATOM 147 N N . TRP 364 364 ? A 72.114 -9.683 66.943 1 1 J TRP 0.600 1 ATOM 148 C CA . TRP 364 364 ? A 72.382 -11.101 66.993 1 1 J TRP 0.600 1 ATOM 149 C C . TRP 364 364 ? A 73.266 -11.444 65.809 1 1 J TRP 0.600 1 ATOM 150 O O . TRP 364 364 ? A 72.908 -11.152 64.671 1 1 J TRP 0.600 1 ATOM 151 C CB . TRP 364 364 ? A 71.067 -11.935 66.955 1 1 J TRP 0.600 1 ATOM 152 C CG . TRP 364 364 ? A 71.241 -13.414 67.325 1 1 J TRP 0.600 1 ATOM 153 C CD1 . TRP 364 364 ? A 71.031 -13.986 68.550 1 1 J TRP 0.600 1 ATOM 154 C CD2 . TRP 364 364 ? A 71.764 -14.448 66.469 1 1 J TRP 0.600 1 ATOM 155 N NE1 . TRP 364 364 ? A 71.393 -15.312 68.517 1 1 J TRP 0.600 1 ATOM 156 C CE2 . TRP 364 364 ? A 71.864 -15.628 67.267 1 1 J TRP 0.600 1 ATOM 157 C CE3 . TRP 364 364 ? A 72.167 -14.467 65.137 1 1 J TRP 0.600 1 ATOM 158 C CZ2 . TRP 364 364 ? A 72.376 -16.798 66.730 1 1 J TRP 0.600 1 ATOM 159 C CZ3 . TRP 364 364 ? A 72.719 -15.643 64.615 1 1 J TRP 0.600 1 ATOM 160 C CH2 . TRP 364 364 ? A 72.818 -16.800 65.400 1 1 J TRP 0.600 1 ATOM 161 N N . HIS 365 365 ? A 74.428 -12.082 66.045 1 1 J HIS 0.400 1 ATOM 162 C CA . HIS 365 365 ? A 75.302 -12.520 64.977 1 1 J HIS 0.400 1 ATOM 163 C C . HIS 365 365 ? A 75.781 -13.926 65.304 1 1 J HIS 0.400 1 ATOM 164 O O . HIS 365 365 ? A 75.784 -14.282 66.485 1 1 J HIS 0.400 1 ATOM 165 C CB . HIS 365 365 ? A 76.534 -11.597 64.826 1 1 J HIS 0.400 1 ATOM 166 C CG . HIS 365 365 ? A 76.176 -10.216 64.388 1 1 J HIS 0.400 1 ATOM 167 N ND1 . HIS 365 365 ? A 75.826 -9.995 63.074 1 1 J HIS 0.400 1 ATOM 168 C CD2 . HIS 365 365 ? A 76.145 -9.052 65.094 1 1 J HIS 0.400 1 ATOM 169 C CE1 . HIS 365 365 ? A 75.583 -8.698 62.999 1 1 J HIS 0.400 1 ATOM 170 N NE2 . HIS 365 365 ? A 75.767 -8.088 64.187 1 1 J HIS 0.400 1 ATOM 171 N N . PRO 366 366 ? A 76.122 -14.746 64.310 1 1 J PRO 0.460 1 ATOM 172 C CA . PRO 366 366 ? A 76.761 -16.037 64.515 1 1 J PRO 0.460 1 ATOM 173 C C . PRO 366 366 ? A 78.250 -15.916 64.781 1 1 J PRO 0.460 1 ATOM 174 O O . PRO 366 366 ? A 78.796 -14.779 64.772 1 1 J PRO 0.460 1 ATOM 175 C CB . PRO 366 366 ? A 76.508 -16.753 63.175 1 1 J PRO 0.460 1 ATOM 176 C CG . PRO 366 366 ? A 76.531 -15.630 62.130 1 1 J PRO 0.460 1 ATOM 177 C CD . PRO 366 366 ? A 75.943 -14.441 62.890 1 1 J PRO 0.460 1 ATOM 178 O OXT . PRO 366 366 ? A 78.885 -16.991 64.982 1 1 J PRO 0.460 1 # # loop_ _atom_type.symbol C N O # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.535 2 1 3 0.051 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 346 PRO 1 0.430 2 1 A 347 SER 1 0.470 3 1 A 348 ASP 1 0.540 4 1 A 349 ASP 1 0.560 5 1 A 350 GLU 1 0.550 6 1 A 351 ASP 1 0.360 7 1 A 352 GLU 1 0.420 8 1 A 353 GLU 1 0.390 9 1 A 354 ASP 1 0.510 10 1 A 355 TYR 1 0.580 11 1 A 356 GLU 1 0.460 12 1 A 357 PRO 1 0.600 13 1 A 358 THR 1 0.590 14 1 A 359 ASP 1 0.580 15 1 A 360 GLU 1 0.630 16 1 A 361 ASP 1 0.690 17 1 A 362 SER 1 0.720 18 1 A 363 ASP 1 0.690 19 1 A 364 TRP 1 0.600 20 1 A 365 HIS 1 0.400 21 1 A 366 PRO 1 0.460 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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