data_SMR-0681281a1898d2e104cb3519015d3e6a_2 _entry.id SMR-0681281a1898d2e104cb3519015d3e6a_2 _struct.entry_id SMR-0681281a1898d2e104cb3519015d3e6a_2 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q9GZZ9/ UBA5_HUMAN, Ubiquitin-like modifier-activating enzyme 5 Estimated model accuracy of this model is 0.041, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q9GZZ9' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 52168.591 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP UBA5_HUMAN Q9GZZ9 1 ;MAESVERLQQRVQELERELAQERSLQVPRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEK IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP DVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSEN AVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVS FYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPKQEVIQEEEEIIHEDNEWGIELVSEVS EEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNM ; 'Ubiquitin-like modifier-activating enzyme 5' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 404 1 404 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . UBA5_HUMAN Q9GZZ9 . 1 404 9606 'Homo sapiens (Human)' 2001-03-01 02F0F64FEAA1E880 # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no A ;MAESVERLQQRVQELERELAQERSLQVPRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEK IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP DVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSEN AVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVS FYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPKQEVIQEEEEIIHEDNEWGIELVSEVS EEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNM ; ;MAESVERLQQRVQELERELAQERSLQVPRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEK IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP DVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSEN AVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVS FYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPKQEVIQEEEEIIHEDNEWGIELVSEVS EEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNM ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 ALA . 1 3 GLU . 1 4 SER . 1 5 VAL . 1 6 GLU . 1 7 ARG . 1 8 LEU . 1 9 GLN . 1 10 GLN . 1 11 ARG . 1 12 VAL . 1 13 GLN . 1 14 GLU . 1 15 LEU . 1 16 GLU . 1 17 ARG . 1 18 GLU . 1 19 LEU . 1 20 ALA . 1 21 GLN . 1 22 GLU . 1 23 ARG . 1 24 SER . 1 25 LEU . 1 26 GLN . 1 27 VAL . 1 28 PRO . 1 29 ARG . 1 30 SER . 1 31 GLY . 1 32 ASP . 1 33 GLY . 1 34 GLY . 1 35 GLY . 1 36 GLY . 1 37 ARG . 1 38 VAL . 1 39 ARG . 1 40 ILE . 1 41 GLU . 1 42 LYS . 1 43 MET . 1 44 SER . 1 45 SER . 1 46 GLU . 1 47 VAL . 1 48 VAL . 1 49 ASP . 1 50 SER . 1 51 ASN . 1 52 PRO . 1 53 TYR . 1 54 SER . 1 55 ARG . 1 56 LEU . 1 57 MET . 1 58 ALA . 1 59 LEU . 1 60 LYS . 1 61 ARG . 1 62 MET . 1 63 GLY . 1 64 ILE . 1 65 VAL . 1 66 SER . 1 67 ASP . 1 68 TYR . 1 69 GLU . 1 70 LYS . 1 71 ILE . 1 72 ARG . 1 73 THR . 1 74 PHE . 1 75 ALA . 1 76 VAL . 1 77 ALA . 1 78 ILE . 1 79 VAL . 1 80 GLY . 1 81 VAL . 1 82 GLY . 1 83 GLY . 1 84 VAL . 1 85 GLY . 1 86 SER . 1 87 VAL . 1 88 THR . 1 89 ALA . 1 90 GLU . 1 91 MET . 1 92 LEU . 1 93 THR . 1 94 ARG . 1 95 CYS . 1 96 GLY . 1 97 ILE . 1 98 GLY . 1 99 LYS . 1 100 LEU . 1 101 LEU . 1 102 LEU . 1 103 PHE . 1 104 ASP . 1 105 TYR . 1 106 ASP . 1 107 LYS . 1 108 VAL . 1 109 GLU . 1 110 LEU . 1 111 ALA . 1 112 ASN . 1 113 MET . 1 114 ASN . 1 115 ARG . 1 116 LEU . 1 117 PHE . 1 118 PHE . 1 119 GLN . 1 120 PRO . 1 121 HIS . 1 122 GLN . 1 123 ALA . 1 124 GLY . 1 125 LEU . 1 126 SER . 1 127 LYS . 1 128 VAL . 1 129 GLN . 1 130 ALA . 1 131 ALA . 1 132 GLU . 1 133 HIS . 1 134 THR . 1 135 LEU . 1 136 ARG . 1 137 ASN . 1 138 ILE . 1 139 ASN . 1 140 PRO . 1 141 ASP . 1 142 VAL . 1 143 LEU . 1 144 PHE . 1 145 GLU . 1 146 VAL . 1 147 HIS . 1 148 ASN . 1 149 TYR . 1 150 ASN . 1 151 ILE . 1 152 THR . 1 153 THR . 1 154 VAL . 1 155 GLU . 1 156 ASN . 1 157 PHE . 1 158 GLN . 1 159 HIS . 1 160 PHE . 1 161 MET . 1 162 ASP . 1 163 ARG . 1 164 ILE . 1 165 SER . 1 166 ASN . 1 167 GLY . 1 168 GLY . 1 169 LEU . 1 170 GLU . 1 171 GLU . 1 172 GLY . 1 173 LYS . 1 174 PRO . 1 175 VAL . 1 176 ASP . 1 177 LEU . 1 178 VAL . 1 179 LEU . 1 180 SER . 1 181 CYS . 1 182 VAL . 1 183 ASP . 1 184 ASN . 1 185 PHE . 1 186 GLU . 1 187 ALA . 1 188 ARG . 1 189 MET . 1 190 THR . 1 191 ILE . 1 192 ASN . 1 193 THR . 1 194 ALA . 1 195 CYS . 1 196 ASN . 1 197 GLU . 1 198 LEU . 1 199 GLY . 1 200 GLN . 1 201 THR . 1 202 TRP . 1 203 MET . 1 204 GLU . 1 205 SER . 1 206 GLY . 1 207 VAL . 1 208 SER . 1 209 GLU . 1 210 ASN . 1 211 ALA . 1 212 VAL . 1 213 SER . 1 214 GLY . 1 215 HIS . 1 216 ILE . 1 217 GLN . 1 218 LEU . 1 219 ILE . 1 220 ILE . 1 221 PRO . 1 222 GLY . 1 223 GLU . 1 224 SER . 1 225 ALA . 1 226 CYS . 1 227 PHE . 1 228 ALA . 1 229 CYS . 1 230 ALA . 1 231 PRO . 1 232 PRO . 1 233 LEU . 1 234 VAL . 1 235 VAL . 1 236 ALA . 1 237 ALA . 1 238 ASN . 1 239 ILE . 1 240 ASP . 1 241 GLU . 1 242 LYS . 1 243 THR . 1 244 LEU . 1 245 LYS . 1 246 ARG . 1 247 GLU . 1 248 GLY . 1 249 VAL . 1 250 CYS . 1 251 ALA . 1 252 ALA . 1 253 SER . 1 254 LEU . 1 255 PRO . 1 256 THR . 1 257 THR . 1 258 MET . 1 259 GLY . 1 260 VAL . 1 261 VAL . 1 262 ALA . 1 263 GLY . 1 264 ILE . 1 265 LEU . 1 266 VAL . 1 267 GLN . 1 268 ASN . 1 269 VAL . 1 270 LEU . 1 271 LYS . 1 272 PHE . 1 273 LEU . 1 274 LEU . 1 275 ASN . 1 276 PHE . 1 277 GLY . 1 278 THR . 1 279 VAL . 1 280 SER . 1 281 PHE . 1 282 TYR . 1 283 LEU . 1 284 GLY . 1 285 TYR . 1 286 ASN . 1 287 ALA . 1 288 MET . 1 289 GLN . 1 290 ASP . 1 291 PHE . 1 292 PHE . 1 293 PRO . 1 294 THR . 1 295 MET . 1 296 SER . 1 297 MET . 1 298 LYS . 1 299 PRO . 1 300 ASN . 1 301 PRO . 1 302 GLN . 1 303 CYS . 1 304 ASP . 1 305 ASP . 1 306 ARG . 1 307 ASN . 1 308 CYS . 1 309 ARG . 1 310 LYS . 1 311 GLN . 1 312 GLN . 1 313 GLU . 1 314 GLU . 1 315 TYR . 1 316 LYS . 1 317 LYS . 1 318 LYS . 1 319 VAL . 1 320 ALA . 1 321 ALA . 1 322 LEU . 1 323 PRO . 1 324 LYS . 1 325 GLN . 1 326 GLU . 1 327 VAL . 1 328 ILE . 1 329 GLN . 1 330 GLU . 1 331 GLU . 1 332 GLU . 1 333 GLU . 1 334 ILE . 1 335 ILE . 1 336 HIS . 1 337 GLU . 1 338 ASP . 1 339 ASN . 1 340 GLU . 1 341 TRP . 1 342 GLY . 1 343 ILE . 1 344 GLU . 1 345 LEU . 1 346 VAL . 1 347 SER . 1 348 GLU . 1 349 VAL . 1 350 SER . 1 351 GLU . 1 352 GLU . 1 353 GLU . 1 354 LEU . 1 355 LYS . 1 356 ASN . 1 357 PHE . 1 358 SER . 1 359 GLY . 1 360 PRO . 1 361 VAL . 1 362 PRO . 1 363 ASP . 1 364 LEU . 1 365 PRO . 1 366 GLU . 1 367 GLY . 1 368 ILE . 1 369 THR . 1 370 VAL . 1 371 ALA . 1 372 TYR . 1 373 THR . 1 374 ILE . 1 375 PRO . 1 376 LYS . 1 377 LYS . 1 378 GLN . 1 379 GLU . 1 380 ASP . 1 381 SER . 1 382 VAL . 1 383 THR . 1 384 GLU . 1 385 LEU . 1 386 THR . 1 387 VAL . 1 388 GLU . 1 389 ASP . 1 390 SER . 1 391 GLY . 1 392 GLU . 1 393 SER . 1 394 LEU . 1 395 GLU . 1 396 ASP . 1 397 LEU . 1 398 MET . 1 399 ALA . 1 400 LYS . 1 401 MET . 1 402 LYS . 1 403 ASN . 1 404 MET . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? A . A 1 2 ALA 2 ? ? ? A . A 1 3 GLU 3 ? ? ? A . A 1 4 SER 4 ? ? ? A . A 1 5 VAL 5 ? ? ? A . A 1 6 GLU 6 ? ? ? A . A 1 7 ARG 7 ? ? ? A . A 1 8 LEU 8 ? ? ? A . A 1 9 GLN 9 ? ? ? A . A 1 10 GLN 10 ? ? ? A . A 1 11 ARG 11 ? ? ? A . A 1 12 VAL 12 ? ? ? A . A 1 13 GLN 13 ? ? ? A . A 1 14 GLU 14 ? ? ? A . A 1 15 LEU 15 ? ? ? A . A 1 16 GLU 16 ? ? ? A . A 1 17 ARG 17 ? ? ? A . A 1 18 GLU 18 ? ? ? A . A 1 19 LEU 19 ? ? ? A . A 1 20 ALA 20 ? ? ? A . A 1 21 GLN 21 ? ? ? A . A 1 22 GLU 22 ? ? ? A . A 1 23 ARG 23 ? ? ? A . A 1 24 SER 24 ? ? ? A . A 1 25 LEU 25 ? ? ? A . A 1 26 GLN 26 ? ? ? A . A 1 27 VAL 27 ? ? ? A . A 1 28 PRO 28 ? ? ? A . A 1 29 ARG 29 ? ? ? A . A 1 30 SER 30 ? ? ? A . A 1 31 GLY 31 ? ? ? A . A 1 32 ASP 32 ? ? ? A . A 1 33 GLY 33 ? ? ? A . A 1 34 GLY 34 ? ? ? A . A 1 35 GLY 35 ? ? ? A . A 1 36 GLY 36 ? ? ? A . A 1 37 ARG 37 ? ? ? A . A 1 38 VAL 38 ? ? ? A . A 1 39 ARG 39 ? ? ? A . A 1 40 ILE 40 ? ? ? A . A 1 41 GLU 41 ? ? ? A . A 1 42 LYS 42 ? ? ? A . A 1 43 MET 43 ? ? ? A . A 1 44 SER 44 ? ? ? A . A 1 45 SER 45 ? ? ? A . A 1 46 GLU 46 ? ? ? A . A 1 47 VAL 47 ? ? ? A . A 1 48 VAL 48 ? ? ? A . A 1 49 ASP 49 ? ? ? A . A 1 50 SER 50 ? ? ? A . A 1 51 ASN 51 ? ? ? A . A 1 52 PRO 52 ? ? ? A . A 1 53 TYR 53 ? ? ? A . A 1 54 SER 54 ? ? ? A . A 1 55 ARG 55 ? ? ? A . A 1 56 LEU 56 ? ? ? A . A 1 57 MET 57 ? ? ? A . A 1 58 ALA 58 ? ? ? A . A 1 59 LEU 59 ? ? ? A . A 1 60 LYS 60 ? ? ? A . A 1 61 ARG 61 ? ? ? A . A 1 62 MET 62 ? ? ? A . A 1 63 GLY 63 ? ? ? A . A 1 64 ILE 64 ? ? ? A . A 1 65 VAL 65 ? ? ? A . A 1 66 SER 66 ? ? ? A . A 1 67 ASP 67 ? ? ? A . A 1 68 TYR 68 ? ? ? A . A 1 69 GLU 69 ? ? ? A . A 1 70 LYS 70 ? ? ? A . A 1 71 ILE 71 ? ? ? A . A 1 72 ARG 72 ? ? ? A . A 1 73 THR 73 ? ? ? A . A 1 74 PHE 74 ? ? ? A . A 1 75 ALA 75 ? ? ? A . A 1 76 VAL 76 ? ? ? A . A 1 77 ALA 77 ? ? ? A . A 1 78 ILE 78 ? ? ? A . A 1 79 VAL 79 ? ? ? A . A 1 80 GLY 80 ? ? ? A . A 1 81 VAL 81 ? ? ? A . A 1 82 GLY 82 ? ? ? A . A 1 83 GLY 83 ? ? ? A . A 1 84 VAL 84 ? ? ? A . A 1 85 GLY 85 ? ? ? A . A 1 86 SER 86 ? ? ? A . A 1 87 VAL 87 ? ? ? A . A 1 88 THR 88 ? ? ? A . A 1 89 ALA 89 ? ? ? A . A 1 90 GLU 90 ? ? ? A . A 1 91 MET 91 ? ? ? A . A 1 92 LEU 92 ? ? ? A . A 1 93 THR 93 ? ? ? A . A 1 94 ARG 94 ? ? ? A . A 1 95 CYS 95 ? ? ? A . A 1 96 GLY 96 ? ? ? A . A 1 97 ILE 97 ? ? ? A . A 1 98 GLY 98 ? ? ? A . A 1 99 LYS 99 ? ? ? A . A 1 100 LEU 100 ? ? ? A . A 1 101 LEU 101 ? ? ? A . A 1 102 LEU 102 ? ? ? A . A 1 103 PHE 103 ? ? ? A . A 1 104 ASP 104 ? ? ? A . A 1 105 TYR 105 ? ? ? A . A 1 106 ASP 106 ? ? ? A . A 1 107 LYS 107 ? ? ? A . A 1 108 VAL 108 ? ? ? A . A 1 109 GLU 109 ? ? ? A . A 1 110 LEU 110 ? ? ? A . A 1 111 ALA 111 ? ? ? A . A 1 112 ASN 112 ? ? ? A . A 1 113 MET 113 ? ? ? A . A 1 114 ASN 114 ? ? ? A . A 1 115 ARG 115 ? ? ? A . A 1 116 LEU 116 ? ? ? A . A 1 117 PHE 117 ? ? ? A . A 1 118 PHE 118 ? ? ? A . A 1 119 GLN 119 ? ? ? A . A 1 120 PRO 120 ? ? ? A . A 1 121 HIS 121 ? ? ? A . A 1 122 GLN 122 ? ? ? A . A 1 123 ALA 123 ? ? ? A . A 1 124 GLY 124 ? ? ? A . A 1 125 LEU 125 ? ? ? A . A 1 126 SER 126 ? ? ? A . A 1 127 LYS 127 ? ? ? A . A 1 128 VAL 128 ? ? ? A . A 1 129 GLN 129 ? ? ? A . A 1 130 ALA 130 ? ? ? A . A 1 131 ALA 131 ? ? ? A . A 1 132 GLU 132 ? ? ? A . A 1 133 HIS 133 ? ? ? A . A 1 134 THR 134 ? ? ? A . A 1 135 LEU 135 ? ? ? A . A 1 136 ARG 136 ? ? ? A . A 1 137 ASN 137 ? ? ? A . A 1 138 ILE 138 ? ? ? A . A 1 139 ASN 139 ? ? ? A . A 1 140 PRO 140 ? ? ? A . A 1 141 ASP 141 ? ? ? A . A 1 142 VAL 142 ? ? ? A . A 1 143 LEU 143 ? ? ? A . A 1 144 PHE 144 ? ? ? A . A 1 145 GLU 145 ? ? ? A . A 1 146 VAL 146 ? ? ? A . A 1 147 HIS 147 ? ? ? A . A 1 148 ASN 148 ? ? ? A . A 1 149 TYR 149 ? ? ? A . A 1 150 ASN 150 ? ? ? A . A 1 151 ILE 151 ? ? ? A . A 1 152 THR 152 ? ? ? A . A 1 153 THR 153 ? ? ? A . A 1 154 VAL 154 ? ? ? A . A 1 155 GLU 155 ? ? ? A . A 1 156 ASN 156 ? ? ? A . A 1 157 PHE 157 ? ? ? A . A 1 158 GLN 158 ? ? ? A . A 1 159 HIS 159 ? ? ? A . A 1 160 PHE 160 ? ? ? A . A 1 161 MET 161 ? ? ? A . A 1 162 ASP 162 ? ? ? A . A 1 163 ARG 163 ? ? ? A . A 1 164 ILE 164 ? ? ? A . A 1 165 SER 165 ? ? ? A . A 1 166 ASN 166 ? ? ? A . A 1 167 GLY 167 ? ? ? A . A 1 168 GLY 168 ? ? ? A . A 1 169 LEU 169 ? ? ? A . A 1 170 GLU 170 ? ? ? A . A 1 171 GLU 171 ? ? ? A . A 1 172 GLY 172 ? ? ? A . A 1 173 LYS 173 ? ? ? A . A 1 174 PRO 174 ? ? ? A . A 1 175 VAL 175 ? ? ? A . A 1 176 ASP 176 ? ? ? A . A 1 177 LEU 177 ? ? ? A . A 1 178 VAL 178 ? ? ? A . A 1 179 LEU 179 ? ? ? A . A 1 180 SER 180 ? ? ? A . A 1 181 CYS 181 ? ? ? A . A 1 182 VAL 182 ? ? ? A . A 1 183 ASP 183 ? ? ? A . A 1 184 ASN 184 ? ? ? A . A 1 185 PHE 185 ? ? ? A . A 1 186 GLU 186 ? ? ? A . A 1 187 ALA 187 ? ? ? A . A 1 188 ARG 188 ? ? ? A . A 1 189 MET 189 ? ? ? A . A 1 190 THR 190 ? ? ? A . A 1 191 ILE 191 ? ? ? A . A 1 192 ASN 192 ? ? ? A . A 1 193 THR 193 ? ? ? A . A 1 194 ALA 194 ? ? ? A . A 1 195 CYS 195 ? ? ? A . A 1 196 ASN 196 ? ? ? A . A 1 197 GLU 197 ? ? ? A . A 1 198 LEU 198 ? ? ? A . A 1 199 GLY 199 ? ? ? A . A 1 200 GLN 200 ? ? ? A . A 1 201 THR 201 ? ? ? A . A 1 202 TRP 202 ? ? ? A . A 1 203 MET 203 ? ? ? A . A 1 204 GLU 204 ? ? ? A . A 1 205 SER 205 ? ? ? A . A 1 206 GLY 206 ? ? ? A . A 1 207 VAL 207 ? ? ? A . A 1 208 SER 208 ? ? ? A . A 1 209 GLU 209 ? ? ? A . A 1 210 ASN 210 ? ? ? A . A 1 211 ALA 211 ? ? ? A . A 1 212 VAL 212 ? ? ? A . A 1 213 SER 213 ? ? ? A . A 1 214 GLY 214 ? ? ? A . A 1 215 HIS 215 ? ? ? A . A 1 216 ILE 216 ? ? ? A . A 1 217 GLN 217 ? ? ? A . A 1 218 LEU 218 ? ? ? A . A 1 219 ILE 219 ? ? ? A . A 1 220 ILE 220 ? ? ? A . A 1 221 PRO 221 ? ? ? A . A 1 222 GLY 222 ? ? ? A . A 1 223 GLU 223 ? ? ? A . A 1 224 SER 224 ? ? ? A . A 1 225 ALA 225 ? ? ? A . A 1 226 CYS 226 ? ? ? A . A 1 227 PHE 227 ? ? ? A . A 1 228 ALA 228 ? ? ? A . A 1 229 CYS 229 ? ? ? A . A 1 230 ALA 230 ? ? ? A . A 1 231 PRO 231 ? ? ? A . A 1 232 PRO 232 ? ? ? A . A 1 233 LEU 233 ? ? ? A . A 1 234 VAL 234 ? ? ? A . A 1 235 VAL 235 ? ? ? A . A 1 236 ALA 236 ? ? ? A . A 1 237 ALA 237 ? ? ? A . A 1 238 ASN 238 ? ? ? A . A 1 239 ILE 239 ? ? ? A . A 1 240 ASP 240 ? ? ? A . A 1 241 GLU 241 ? ? ? A . A 1 242 LYS 242 ? ? ? A . A 1 243 THR 243 ? ? ? A . A 1 244 LEU 244 ? ? ? A . A 1 245 LYS 245 ? ? ? A . A 1 246 ARG 246 ? ? ? A . A 1 247 GLU 247 ? ? ? A . A 1 248 GLY 248 ? ? ? A . A 1 249 VAL 249 ? ? ? A . A 1 250 CYS 250 ? ? ? A . A 1 251 ALA 251 ? ? ? A . A 1 252 ALA 252 ? ? ? A . A 1 253 SER 253 ? ? ? A . A 1 254 LEU 254 ? ? ? A . A 1 255 PRO 255 ? ? ? A . A 1 256 THR 256 ? ? ? A . A 1 257 THR 257 ? ? ? A . A 1 258 MET 258 ? ? ? A . A 1 259 GLY 259 ? ? ? A . A 1 260 VAL 260 ? ? ? A . A 1 261 VAL 261 ? ? ? A . A 1 262 ALA 262 ? ? ? A . A 1 263 GLY 263 ? ? ? A . A 1 264 ILE 264 ? ? ? A . A 1 265 LEU 265 ? ? ? A . A 1 266 VAL 266 ? ? ? A . A 1 267 GLN 267 ? ? ? A . A 1 268 ASN 268 ? ? ? A . A 1 269 VAL 269 ? ? ? A . A 1 270 LEU 270 ? ? ? A . A 1 271 LYS 271 ? ? ? A . A 1 272 PHE 272 ? ? ? A . A 1 273 LEU 273 ? ? ? A . A 1 274 LEU 274 ? ? ? A . A 1 275 ASN 275 ? ? ? A . A 1 276 PHE 276 ? ? ? A . A 1 277 GLY 277 ? ? ? A . A 1 278 THR 278 ? ? ? A . A 1 279 VAL 279 ? ? ? A . A 1 280 SER 280 ? ? ? A . A 1 281 PHE 281 ? ? ? A . A 1 282 TYR 282 ? ? ? A . A 1 283 LEU 283 ? ? ? A . A 1 284 GLY 284 ? ? ? A . A 1 285 TYR 285 ? ? ? A . A 1 286 ASN 286 ? ? ? A . A 1 287 ALA 287 ? ? ? A . A 1 288 MET 288 ? ? ? A . A 1 289 GLN 289 ? ? ? A . A 1 290 ASP 290 ? ? ? A . A 1 291 PHE 291 ? ? ? A . A 1 292 PHE 292 ? ? ? A . A 1 293 PRO 293 ? ? ? A . A 1 294 THR 294 ? ? ? A . A 1 295 MET 295 ? ? ? A . A 1 296 SER 296 ? ? ? A . A 1 297 MET 297 ? ? ? A . A 1 298 LYS 298 ? ? ? A . A 1 299 PRO 299 ? ? ? A . A 1 300 ASN 300 ? ? ? A . A 1 301 PRO 301 ? ? ? A . A 1 302 GLN 302 ? ? ? A . A 1 303 CYS 303 ? ? ? A . A 1 304 ASP 304 ? ? ? A . A 1 305 ASP 305 ? ? ? A . A 1 306 ARG 306 ? ? ? A . A 1 307 ASN 307 ? ? ? A . A 1 308 CYS 308 ? ? ? A . A 1 309 ARG 309 ? ? ? A . A 1 310 LYS 310 ? ? ? A . A 1 311 GLN 311 ? ? ? A . A 1 312 GLN 312 ? ? ? A . A 1 313 GLU 313 ? ? ? A . A 1 314 GLU 314 ? ? ? A . A 1 315 TYR 315 ? ? ? A . A 1 316 LYS 316 ? ? ? A . A 1 317 LYS 317 ? ? ? A . A 1 318 LYS 318 ? ? ? A . A 1 319 VAL 319 ? ? ? A . A 1 320 ALA 320 ? ? ? A . A 1 321 ALA 321 ? ? ? A . A 1 322 LEU 322 ? ? ? A . A 1 323 PRO 323 ? ? ? A . A 1 324 LYS 324 ? ? ? A . A 1 325 GLN 325 ? ? ? A . A 1 326 GLU 326 ? ? ? A . A 1 327 VAL 327 ? ? ? A . A 1 328 ILE 328 ? ? ? A . A 1 329 GLN 329 ? ? ? A . A 1 330 GLU 330 ? ? ? A . A 1 331 GLU 331 ? ? ? A . A 1 332 GLU 332 ? ? ? A . A 1 333 GLU 333 ? ? ? A . A 1 334 ILE 334 ? ? ? A . A 1 335 ILE 335 ? ? ? A . A 1 336 HIS 336 ? ? ? A . A 1 337 GLU 337 ? ? ? A . A 1 338 ASP 338 ? ? ? A . A 1 339 ASN 339 ? ? ? A . A 1 340 GLU 340 ? ? ? A . A 1 341 TRP 341 ? ? ? A . A 1 342 GLY 342 ? ? ? A . A 1 343 ILE 343 ? ? ? A . A 1 344 GLU 344 ? ? ? A . A 1 345 LEU 345 ? ? ? A . A 1 346 VAL 346 ? ? ? A . A 1 347 SER 347 ? ? ? A . A 1 348 GLU 348 ? ? ? A . A 1 349 VAL 349 ? ? ? A . A 1 350 SER 350 ? ? ? A . A 1 351 GLU 351 ? ? ? A . A 1 352 GLU 352 ? ? ? A . A 1 353 GLU 353 ? ? ? A . A 1 354 LEU 354 ? ? ? A . A 1 355 LYS 355 ? ? ? A . A 1 356 ASN 356 ? ? ? A . A 1 357 PHE 357 ? ? ? A . A 1 358 SER 358 ? ? ? A . A 1 359 GLY 359 ? ? ? A . A 1 360 PRO 360 ? ? ? A . A 1 361 VAL 361 ? ? ? A . A 1 362 PRO 362 ? ? ? A . A 1 363 ASP 363 ? ? ? A . A 1 364 LEU 364 ? ? ? A . A 1 365 PRO 365 ? ? ? A . A 1 366 GLU 366 ? ? ? A . A 1 367 GLY 367 ? ? ? A . A 1 368 ILE 368 ? ? ? A . A 1 369 THR 369 ? ? ? A . A 1 370 VAL 370 ? ? ? A . A 1 371 ALA 371 ? ? ? A . A 1 372 TYR 372 ? ? ? A . A 1 373 THR 373 ? ? ? A . A 1 374 ILE 374 ? ? ? A . A 1 375 PRO 375 ? ? ? A . A 1 376 LYS 376 ? ? ? A . A 1 377 LYS 377 ? ? ? A . A 1 378 GLN 378 ? ? ? A . A 1 379 GLU 379 ? ? ? A . A 1 380 ASP 380 ? ? ? A . A 1 381 SER 381 ? ? ? A . A 1 382 VAL 382 382 VAL VAL A . A 1 383 THR 383 383 THR THR A . A 1 384 GLU 384 384 GLU GLU A . A 1 385 LEU 385 385 LEU LEU A . A 1 386 THR 386 386 THR THR A . A 1 387 VAL 387 387 VAL VAL A . A 1 388 GLU 388 388 GLU GLU A . A 1 389 ASP 389 389 ASP ASP A . A 1 390 SER 390 390 SER SER A . A 1 391 GLY 391 391 GLY GLY A . A 1 392 GLU 392 392 GLU GLU A . A 1 393 SER 393 393 SER SER A . A 1 394 LEU 394 394 LEU LEU A . A 1 395 GLU 395 395 GLU GLU A . A 1 396 ASP 396 396 ASP ASP A . A 1 397 LEU 397 397 LEU LEU A . A 1 398 MET 398 398 MET MET A . A 1 399 ALA 399 399 ALA ALA A . A 1 400 LYS 400 400 LYS LYS A . A 1 401 MET 401 401 MET MET A . A 1 402 LYS 402 402 LYS LYS A . A 1 403 ASN 403 403 ASN ASN A . A 1 404 MET 404 404 MET MET A . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'Ubiquitin-like modifier-activating enzyme 5,Ubiquitin-fold modifier-conjugating enzyme 1 {PDB ID=7nvk, label_asym_id=A, auth_asym_id=AAA, SMTL ID=7nvk.1.A}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 7nvk, label_asym_id=A' 'target-template alignment' . 4 'model 2' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-11 6 PDB https://www.wwpdb.org . 2024-12-06 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A A 1 1 AAA # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;GSEVSEEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNMMADEATRRVVS EIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFD IEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIP DLIQKGVIQHKEKCNQ ; ;GSEVSEEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNMMADEATRRVVS EIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFD IEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIP DLIQKGVIQHKEKCNQ ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 5 59 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 7nvk 2024-01-31 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 404 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 404 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 3.1e-05 100.000 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MAESVERLQQRVQELERELAQERSLQVPRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPKQEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNM 2 1 2 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNM # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 7nvk.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 2' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . VAL 382 382 ? A 17.703 37.224 12.446 1 1 A VAL 0.420 1 ATOM 2 C CA . VAL 382 382 ? A 16.885 36.370 11.528 1 1 A VAL 0.420 1 ATOM 3 C C . VAL 382 382 ? A 15.516 37.007 11.497 1 1 A VAL 0.420 1 ATOM 4 O O . VAL 382 382 ? A 15.078 37.573 12.487 1 1 A VAL 0.420 1 ATOM 5 C CB . VAL 382 382 ? A 16.966 34.872 11.949 1 1 A VAL 0.420 1 ATOM 6 C CG1 . VAL 382 382 ? A 17.445 34.672 13.415 1 1 A VAL 0.420 1 ATOM 7 C CG2 . VAL 382 382 ? A 15.642 34.098 11.730 1 1 A VAL 0.420 1 ATOM 8 N N . THR 383 383 ? A 14.864 37.037 10.316 1 1 A THR 0.420 1 ATOM 9 C CA . THR 383 383 ? A 13.491 37.496 10.171 1 1 A THR 0.420 1 ATOM 10 C C . THR 383 383 ? A 12.620 36.348 10.580 1 1 A THR 0.420 1 ATOM 11 O O . THR 383 383 ? A 12.460 35.381 9.847 1 1 A THR 0.420 1 ATOM 12 C CB . THR 383 383 ? A 13.197 37.943 8.734 1 1 A THR 0.420 1 ATOM 13 O OG1 . THR 383 383 ? A 13.701 39.257 8.573 1 1 A THR 0.420 1 ATOM 14 C CG2 . THR 383 383 ? A 11.715 37.977 8.310 1 1 A THR 0.420 1 ATOM 15 N N . GLU 384 384 ? A 12.080 36.433 11.817 1 1 A GLU 0.640 1 ATOM 16 C CA . GLU 384 384 ? A 11.066 35.532 12.310 1 1 A GLU 0.640 1 ATOM 17 C C . GLU 384 384 ? A 9.786 35.771 11.539 1 1 A GLU 0.640 1 ATOM 18 O O . GLU 384 384 ? A 9.588 36.842 10.979 1 1 A GLU 0.640 1 ATOM 19 C CB . GLU 384 384 ? A 10.848 35.649 13.851 1 1 A GLU 0.640 1 ATOM 20 C CG . GLU 384 384 ? A 12.162 35.714 14.685 1 1 A GLU 0.640 1 ATOM 21 C CD . GLU 384 384 ? A 13.147 34.575 14.414 1 1 A GLU 0.640 1 ATOM 22 O OE1 . GLU 384 384 ? A 14.328 34.751 14.817 1 1 A GLU 0.640 1 ATOM 23 O OE2 . GLU 384 384 ? A 12.760 33.555 13.792 1 1 A GLU 0.640 1 ATOM 24 N N . LEU 385 385 ? A 8.895 34.769 11.414 1 1 A LEU 0.610 1 ATOM 25 C CA . LEU 385 385 ? A 7.685 34.962 10.627 1 1 A LEU 0.610 1 ATOM 26 C C . LEU 385 385 ? A 6.708 36.000 11.216 1 1 A LEU 0.610 1 ATOM 27 O O . LEU 385 385 ? A 5.992 35.736 12.170 1 1 A LEU 0.610 1 ATOM 28 C CB . LEU 385 385 ? A 6.943 33.620 10.362 1 1 A LEU 0.610 1 ATOM 29 C CG . LEU 385 385 ? A 6.463 33.400 8.899 1 1 A LEU 0.610 1 ATOM 30 C CD1 . LEU 385 385 ? A 5.900 34.647 8.178 1 1 A LEU 0.610 1 ATOM 31 C CD2 . LEU 385 385 ? A 7.574 32.737 8.061 1 1 A LEU 0.610 1 ATOM 32 N N . THR 386 386 ? A 6.646 37.222 10.634 1 1 A THR 0.630 1 ATOM 33 C CA . THR 386 386 ? A 5.751 38.271 11.101 1 1 A THR 0.630 1 ATOM 34 C C . THR 386 386 ? A 4.749 38.500 10.001 1 1 A THR 0.630 1 ATOM 35 O O . THR 386 386 ? A 5.015 38.257 8.834 1 1 A THR 0.630 1 ATOM 36 C CB . THR 386 386 ? A 6.407 39.596 11.588 1 1 A THR 0.630 1 ATOM 37 O OG1 . THR 386 386 ? A 6.729 40.542 10.586 1 1 A THR 0.630 1 ATOM 38 C CG2 . THR 386 386 ? A 7.752 39.319 12.264 1 1 A THR 0.630 1 ATOM 39 N N . VAL 387 387 ? A 3.527 38.934 10.378 1 1 A VAL 0.640 1 ATOM 40 C CA . VAL 387 387 ? A 2.556 39.555 9.486 1 1 A VAL 0.640 1 ATOM 41 C C . VAL 387 387 ? A 3.174 40.636 8.589 1 1 A VAL 0.640 1 ATOM 42 O O . VAL 387 387 ? A 3.643 41.668 9.052 1 1 A VAL 0.640 1 ATOM 43 C CB . VAL 387 387 ? A 1.399 40.112 10.337 1 1 A VAL 0.640 1 ATOM 44 C CG1 . VAL 387 387 ? A 0.618 41.279 9.685 1 1 A VAL 0.640 1 ATOM 45 C CG2 . VAL 387 387 ? A 0.427 38.956 10.659 1 1 A VAL 0.640 1 ATOM 46 N N . GLU 388 388 ? A 3.170 40.390 7.262 1 1 A GLU 0.610 1 ATOM 47 C CA . GLU 388 388 ? A 3.535 41.350 6.252 1 1 A GLU 0.610 1 ATOM 48 C C . GLU 388 388 ? A 2.253 41.812 5.584 1 1 A GLU 0.610 1 ATOM 49 O O . GLU 388 388 ? A 1.226 41.146 5.632 1 1 A GLU 0.610 1 ATOM 50 C CB . GLU 388 388 ? A 4.553 40.755 5.237 1 1 A GLU 0.610 1 ATOM 51 C CG . GLU 388 388 ? A 4.320 39.265 4.849 1 1 A GLU 0.610 1 ATOM 52 C CD . GLU 388 388 ? A 4.651 38.987 3.383 1 1 A GLU 0.610 1 ATOM 53 O OE1 . GLU 388 388 ? A 3.956 39.572 2.515 1 1 A GLU 0.610 1 ATOM 54 O OE2 . GLU 388 388 ? A 5.578 38.179 3.122 1 1 A GLU 0.610 1 ATOM 55 N N . ASP 389 389 ? A 2.292 43.041 5.029 1 1 A ASP 0.720 1 ATOM 56 C CA . ASP 389 389 ? A 1.119 43.769 4.615 1 1 A ASP 0.720 1 ATOM 57 C C . ASP 389 389 ? A 0.943 43.681 3.097 1 1 A ASP 0.720 1 ATOM 58 O O . ASP 389 389 ? A 1.831 44.009 2.319 1 1 A ASP 0.720 1 ATOM 59 C CB . ASP 389 389 ? A 1.292 45.237 5.098 1 1 A ASP 0.720 1 ATOM 60 C CG . ASP 389 389 ? A -0.039 45.942 5.275 1 1 A ASP 0.720 1 ATOM 61 O OD1 . ASP 389 389 ? A -1.082 45.354 4.913 1 1 A ASP 0.720 1 ATOM 62 O OD2 . ASP 389 389 ? A -0.012 47.068 5.833 1 1 A ASP 0.720 1 ATOM 63 N N . SER 390 390 ? A -0.242 43.202 2.660 1 1 A SER 0.770 1 ATOM 64 C CA . SER 390 390 ? A -0.654 43.127 1.270 1 1 A SER 0.770 1 ATOM 65 C C . SER 390 390 ? A -1.746 44.161 1.032 1 1 A SER 0.770 1 ATOM 66 O O . SER 390 390 ? A -1.983 45.065 1.819 1 1 A SER 0.770 1 ATOM 67 C CB . SER 390 390 ? A -1.100 41.681 0.839 1 1 A SER 0.770 1 ATOM 68 O OG . SER 390 390 ? A -2.088 41.121 1.718 1 1 A SER 0.770 1 ATOM 69 N N . GLY 391 391 ? A -2.436 44.113 -0.123 1 1 A GLY 0.650 1 ATOM 70 C CA . GLY 391 391 ? A -3.418 45.129 -0.500 1 1 A GLY 0.650 1 ATOM 71 C C . GLY 391 391 ? A -4.839 44.709 -0.252 1 1 A GLY 0.650 1 ATOM 72 O O . GLY 391 391 ? A -5.748 45.276 -0.839 1 1 A GLY 0.650 1 ATOM 73 N N . GLU 392 392 ? A -5.045 43.683 0.598 1 1 A GLU 0.650 1 ATOM 74 C CA . GLU 392 392 ? A -6.348 43.141 0.947 1 1 A GLU 0.650 1 ATOM 75 C C . GLU 392 392 ? A -6.971 43.966 2.082 1 1 A GLU 0.650 1 ATOM 76 O O . GLU 392 392 ? A -6.357 44.260 3.090 1 1 A GLU 0.650 1 ATOM 77 C CB . GLU 392 392 ? A -6.226 41.637 1.384 1 1 A GLU 0.650 1 ATOM 78 C CG . GLU 392 392 ? A -6.192 40.590 0.216 1 1 A GLU 0.650 1 ATOM 79 C CD . GLU 392 392 ? A -5.239 39.396 0.412 1 1 A GLU 0.650 1 ATOM 80 O OE1 . GLU 392 392 ? A -4.004 39.652 0.426 1 1 A GLU 0.650 1 ATOM 81 O OE2 . GLU 392 392 ? A -5.686 38.212 0.526 1 1 A GLU 0.650 1 ATOM 82 N N . SER 393 393 ? A -8.261 44.364 1.915 1 1 A SER 0.690 1 ATOM 83 C CA . SER 393 393 ? A -9.040 44.994 2.980 1 1 A SER 0.690 1 ATOM 84 C C . SER 393 393 ? A -9.411 43.987 4.052 1 1 A SER 0.690 1 ATOM 85 O O . SER 393 393 ? A -9.216 42.786 3.931 1 1 A SER 0.690 1 ATOM 86 C CB . SER 393 393 ? A -10.338 45.753 2.518 1 1 A SER 0.690 1 ATOM 87 O OG . SER 393 393 ? A -11.489 44.933 2.301 1 1 A SER 0.690 1 ATOM 88 N N . LEU 394 394 ? A -10.000 44.469 5.162 1 1 A LEU 0.690 1 ATOM 89 C CA . LEU 394 394 ? A -10.529 43.602 6.194 1 1 A LEU 0.690 1 ATOM 90 C C . LEU 394 394 ? A -11.619 42.639 5.715 1 1 A LEU 0.690 1 ATOM 91 O O . LEU 394 394 ? A -11.637 41.472 6.112 1 1 A LEU 0.690 1 ATOM 92 C CB . LEU 394 394 ? A -11.115 44.487 7.312 1 1 A LEU 0.690 1 ATOM 93 C CG . LEU 394 394 ? A -11.505 43.737 8.602 1 1 A LEU 0.690 1 ATOM 94 C CD1 . LEU 394 394 ? A -10.328 42.968 9.235 1 1 A LEU 0.690 1 ATOM 95 C CD2 . LEU 394 394 ? A -12.092 44.741 9.605 1 1 A LEU 0.690 1 ATOM 96 N N . GLU 395 395 ? A -12.545 43.085 4.841 1 1 A GLU 0.660 1 ATOM 97 C CA . GLU 395 395 ? A -13.540 42.273 4.166 1 1 A GLU 0.660 1 ATOM 98 C C . GLU 395 395 ? A -13.023 41.271 3.160 1 1 A GLU 0.660 1 ATOM 99 O O . GLU 395 395 ? A -13.502 40.152 3.133 1 1 A GLU 0.660 1 ATOM 100 C CB . GLU 395 395 ? A -14.667 43.103 3.523 1 1 A GLU 0.660 1 ATOM 101 C CG . GLU 395 395 ? A -15.798 43.359 4.544 1 1 A GLU 0.660 1 ATOM 102 C CD . GLU 395 395 ? A -15.660 44.652 5.342 1 1 A GLU 0.660 1 ATOM 103 O OE1 . GLU 395 395 ? A -14.524 45.180 5.477 1 1 A GLU 0.660 1 ATOM 104 O OE2 . GLU 395 395 ? A -16.720 45.104 5.843 1 1 A GLU 0.660 1 ATOM 105 N N . ASP 396 396 ? A -11.997 41.638 2.351 1 1 A ASP 0.670 1 ATOM 106 C CA . ASP 396 396 ? A -11.294 40.731 1.453 1 1 A ASP 0.670 1 ATOM 107 C C . ASP 396 396 ? A -10.738 39.540 2.248 1 1 A ASP 0.670 1 ATOM 108 O O . ASP 396 396 ? A -10.679 38.400 1.765 1 1 A ASP 0.670 1 ATOM 109 C CB . ASP 396 396 ? A -10.120 41.469 0.733 1 1 A ASP 0.670 1 ATOM 110 C CG . ASP 396 396 ? A -10.534 42.705 -0.055 1 1 A ASP 0.670 1 ATOM 111 O OD1 . ASP 396 396 ? A -11.737 42.884 -0.356 1 1 A ASP 0.670 1 ATOM 112 O OD2 . ASP 396 396 ? A -9.615 43.526 -0.323 1 1 A ASP 0.670 1 ATOM 113 N N . LEU 397 397 ? A -10.356 39.770 3.517 1 1 A LEU 0.700 1 ATOM 114 C CA . LEU 397 397 ? A -9.908 38.776 4.477 1 1 A LEU 0.700 1 ATOM 115 C C . LEU 397 397 ? A -10.953 38.070 5.329 1 1 A LEU 0.700 1 ATOM 116 O O . LEU 397 397 ? A -10.910 36.851 5.483 1 1 A LEU 0.700 1 ATOM 117 C CB . LEU 397 397 ? A -8.899 39.423 5.438 1 1 A LEU 0.700 1 ATOM 118 C CG . LEU 397 397 ? A -7.616 39.917 4.741 1 1 A LEU 0.700 1 ATOM 119 C CD1 . LEU 397 397 ? A -6.557 40.210 5.812 1 1 A LEU 0.700 1 ATOM 120 C CD2 . LEU 397 397 ? A -7.074 38.943 3.675 1 1 A LEU 0.700 1 ATOM 121 N N . MET 398 398 ? A -11.946 38.749 5.911 1 1 A MET 0.640 1 ATOM 122 C CA . MET 398 398 ? A -13.064 38.121 6.590 1 1 A MET 0.640 1 ATOM 123 C C . MET 398 398 ? A -13.922 37.235 5.678 1 1 A MET 0.640 1 ATOM 124 O O . MET 398 398 ? A -14.543 36.274 6.139 1 1 A MET 0.640 1 ATOM 125 C CB . MET 398 398 ? A -14.060 39.172 7.125 1 1 A MET 0.640 1 ATOM 126 C CG . MET 398 398 ? A -13.707 39.919 8.421 1 1 A MET 0.640 1 ATOM 127 S SD . MET 398 398 ? A -15.183 40.812 9.013 1 1 A MET 0.640 1 ATOM 128 C CE . MET 398 398 ? A -14.476 41.701 10.422 1 1 A MET 0.640 1 ATOM 129 N N . ALA 399 399 ? A -14.049 37.597 4.381 1 1 A ALA 0.620 1 ATOM 130 C CA . ALA 399 399 ? A -14.583 36.765 3.318 1 1 A ALA 0.620 1 ATOM 131 C C . ALA 399 399 ? A -13.685 35.581 2.949 1 1 A ALA 0.620 1 ATOM 132 O O . ALA 399 399 ? A -14.146 34.460 2.829 1 1 A ALA 0.620 1 ATOM 133 C CB . ALA 399 399 ? A -14.771 37.599 2.032 1 1 A ALA 0.620 1 ATOM 134 N N . LYS 400 400 ? A -12.361 35.801 2.790 1 1 A LYS 0.600 1 ATOM 135 C CA . LYS 400 400 ? A -11.368 34.770 2.532 1 1 A LYS 0.600 1 ATOM 136 C C . LYS 400 400 ? A -11.200 33.759 3.661 1 1 A LYS 0.600 1 ATOM 137 O O . LYS 400 400 ? A -10.871 32.609 3.410 1 1 A LYS 0.600 1 ATOM 138 C CB . LYS 400 400 ? A -10.020 35.428 2.141 1 1 A LYS 0.600 1 ATOM 139 C CG . LYS 400 400 ? A -8.826 34.478 1.946 1 1 A LYS 0.600 1 ATOM 140 C CD . LYS 400 400 ? A -7.631 35.203 1.303 1 1 A LYS 0.600 1 ATOM 141 C CE . LYS 400 400 ? A -6.287 34.504 1.509 1 1 A LYS 0.600 1 ATOM 142 N NZ . LYS 400 400 ? A -5.206 35.418 1.071 1 1 A LYS 0.600 1 ATOM 143 N N . MET 401 401 ? A -11.487 34.144 4.921 1 1 A MET 0.600 1 ATOM 144 C CA . MET 401 401 ? A -11.620 33.226 6.045 1 1 A MET 0.600 1 ATOM 145 C C . MET 401 401 ? A -12.755 32.223 5.885 1 1 A MET 0.600 1 ATOM 146 O O . MET 401 401 ? A -12.628 31.064 6.268 1 1 A MET 0.600 1 ATOM 147 C CB . MET 401 401 ? A -11.928 34.008 7.355 1 1 A MET 0.600 1 ATOM 148 C CG . MET 401 401 ? A -11.963 33.120 8.624 1 1 A MET 0.600 1 ATOM 149 S SD . MET 401 401 ? A -10.344 32.961 9.429 1 1 A MET 0.600 1 ATOM 150 C CE . MET 401 401 ? A -10.717 31.358 10.192 1 1 A MET 0.600 1 ATOM 151 N N . LYS 402 402 ? A -13.910 32.634 5.344 1 1 A LYS 0.570 1 ATOM 152 C CA . LYS 402 402 ? A -15.069 31.781 5.127 1 1 A LYS 0.570 1 ATOM 153 C C . LYS 402 402 ? A -14.970 30.945 3.869 1 1 A LYS 0.570 1 ATOM 154 O O . LYS 402 402 ? A -15.761 30.025 3.662 1 1 A LYS 0.570 1 ATOM 155 C CB . LYS 402 402 ? A -16.351 32.640 5.002 1 1 A LYS 0.570 1 ATOM 156 C CG . LYS 402 402 ? A -16.765 33.256 6.344 1 1 A LYS 0.570 1 ATOM 157 C CD . LYS 402 402 ? A -17.976 34.199 6.226 1 1 A LYS 0.570 1 ATOM 158 C CE . LYS 402 402 ? A -18.119 35.150 7.418 1 1 A LYS 0.570 1 ATOM 159 N NZ . LYS 402 402 ? A -17.053 36.171 7.343 1 1 A LYS 0.570 1 ATOM 160 N N . ASN 403 403 ? A -13.995 31.251 2.999 1 1 A ASN 0.570 1 ATOM 161 C CA . ASN 403 403 ? A -13.612 30.398 1.897 1 1 A ASN 0.570 1 ATOM 162 C C . ASN 403 403 ? A -12.428 29.502 2.283 1 1 A ASN 0.570 1 ATOM 163 O O . ASN 403 403 ? A -11.750 28.969 1.418 1 1 A ASN 0.570 1 ATOM 164 C CB . ASN 403 403 ? A -13.296 31.228 0.618 1 1 A ASN 0.570 1 ATOM 165 C CG . ASN 403 403 ? A -14.577 31.634 -0.092 1 1 A ASN 0.570 1 ATOM 166 O OD1 . ASN 403 403 ? A -15.712 31.600 0.427 1 1 A ASN 0.570 1 ATOM 167 N ND2 . ASN 403 403 ? A -14.463 32.013 -1.374 1 1 A ASN 0.570 1 ATOM 168 N N . MET 404 404 ? A -12.196 29.311 3.603 1 1 A MET 0.570 1 ATOM 169 C CA . MET 404 404 ? A -11.361 28.282 4.180 1 1 A MET 0.570 1 ATOM 170 C C . MET 404 404 ? A -12.166 27.580 5.306 1 1 A MET 0.570 1 ATOM 171 O O . MET 404 404 ? A -13.319 28.002 5.592 1 1 A MET 0.570 1 ATOM 172 C CB . MET 404 404 ? A -10.086 28.892 4.825 1 1 A MET 0.570 1 ATOM 173 C CG . MET 404 404 ? A -9.093 29.488 3.807 1 1 A MET 0.570 1 ATOM 174 S SD . MET 404 404 ? A -8.024 30.795 4.495 1 1 A MET 0.570 1 ATOM 175 C CE . MET 404 404 ? A -6.500 30.268 3.666 1 1 A MET 0.570 1 ATOM 176 O OXT . MET 404 404 ? A -11.620 26.602 5.887 1 1 A MET 0.570 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.623 2 1 3 0.041 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 382 VAL 1 0.420 2 1 A 383 THR 1 0.420 3 1 A 384 GLU 1 0.640 4 1 A 385 LEU 1 0.610 5 1 A 386 THR 1 0.630 6 1 A 387 VAL 1 0.640 7 1 A 388 GLU 1 0.610 8 1 A 389 ASP 1 0.720 9 1 A 390 SER 1 0.770 10 1 A 391 GLY 1 0.650 11 1 A 392 GLU 1 0.650 12 1 A 393 SER 1 0.690 13 1 A 394 LEU 1 0.690 14 1 A 395 GLU 1 0.660 15 1 A 396 ASP 1 0.670 16 1 A 397 LEU 1 0.700 17 1 A 398 MET 1 0.640 18 1 A 399 ALA 1 0.620 19 1 A 400 LYS 1 0.600 20 1 A 401 MET 1 0.600 21 1 A 402 LYS 1 0.570 22 1 A 403 ASN 1 0.570 23 1 A 404 MET 1 0.570 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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