data_SMR-0f1bee10a8c4e8ca7a8a629c716a2a11_3 _entry.id SMR-0f1bee10a8c4e8ca7a8a629c716a2a11_3 _struct.entry_id SMR-0f1bee10a8c4e8ca7a8a629c716a2a11_3 _struct.pdbx_model_details ;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries: - Q6UDF5/ GI_PSHV1, Envelope glycoprotein I Estimated model accuracy of this model is 0.001, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE). ; _struct.pdbx_structure_determination_methodology computational _struct.title 'Model for UniProtKB entries Q6UDF5' _audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic _audit_conform.dict_name mmcif_ma.dic _audit_conform.dict_version 1.4.6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The SWISS-MODEL Repository - new features and functionality' 'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132 2 'SWISS-MODEL: homology modelling of protein structures and complexes' 'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427 3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1) 1 18 2021 33507980 10.1371/journal.pcbi.1008667 4 'QMEANDisCo - distance constraints applied on model quality estimation' Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828 5 'OpenStructure: an integrated software framework for computational structural biology' 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579 10.1107/S0907444913007051 6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500 10.1186/1471-2105-10-421 7 'HH-suite3 for fast remote homology detection and deep protein annotation' 'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7 # # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bienert, S.' 1 primary 'Waterhouse, A.' 2 primary 'de Beer, T.A.P.' 3 primary 'Tauriello, G.' 4 primary 'Studer, G.' 5 primary 'Bordoli, L.' 6 primary 'Schwede, T.' 7 2 'Waterhouse, A.' 8 2 'Bertoni, M.' 9 2 'Bienert, S.' 10 2 'Studer, G.' 11 2 'Tauriello, G.' 12 2 'Gumienny, R.' 13 2 'Heer, F.T.' 14 2 'de Beer, T.A.P.' 15 2 'Rempfer, C.' 16 2 'Bordoli, L.' 17 2 'Lepore, R.' 18 2 'Schwede, T.' 19 3 'Studer, G.' 20 3 'Tauriello, G.' 21 3 'Bienert, S.' 22 3 'Biasini, M.' 23 3 'Johner, N.' 24 3 'Schwede, T.' 25 4 'Studer, G.' 26 4 'Rempfer, C.' 27 4 'Waterhouse, A.M.' 28 4 'Gumienny, R.' 29 4 'Haas, J.' 30 4 'Schwede, T.' 31 5 'Biasini, M.' 32 5 'Schmidt, T.' 33 5 'Bienert, S.' 34 5 'Mariani, V.' 35 5 'Studer, G.' 36 5 'Haas, J.' 37 5 'Johner, N.' 38 5 'Schenk, A.D.' 39 5 'Philippsen, A.' 40 5 'Schwede, T.' 41 6 'Camacho, C.' 42 6 'Coulouris, G.' 43 6 'Avagyan, V.' 44 6 'Ma, N.' 45 6 'Papadopoulos, J.' 46 6 'Bealer, K.' 47 6 'Madden, T.L.' 48 7 'Steinegger, M.' 49 7 'Meier, M.' 50 7 'Mirdita, M.' 51 7 'Vohringer, H.' 52 7 'Haunsberger, S.J.' 53 7 'Soding, J.' 54 # # loop_ _software.pdbx_ordinal _software.name _software.classification _software.description _software.version _software.type _software.location _software.citation_id 1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3 package https://swissmodel.expasy.org 2 2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library https://git.scicore.unibas.ch/schwede/ProMod3 3 3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1 library https://git.scicore.unibas.ch/schwede/QMEAN 4 4 OpenStructure 'data processing' 'Open-Source Computational Structural Biology Framework' 2.8.0 package https://openstructure.org/ 5 5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6 6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0 package https://github.com/soedinglab/hh-suite 7 # # loop_ _ma_software_group.ordinal_id _ma_software_group.group_id _ma_software_group.software_id _ma_software_group.parameter_group_id 1 1 6 . 2 2 1 . 3 2 4 . 4 2 5 . 5 2 6 . 6 3 1 . 7 3 4 . 8 4 1 . 9 4 2 . 10 4 4 . 11 5 3 . 12 6 1 . 13 6 3 . 14 6 4 . # # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bienert, S.' 1 'Waterhouse, A.' 2 'de Beer, T.A.P.' 3 'Tauriello, G.' 4 'Studer, G.' 5 'Bordoli, L.' 6 'Schwede, T.' 7 # # loop_ _chem_comp.id _chem_comp.type _chem_comp.name _chem_comp.formula _chem_comp.formula_weight _chem_comp.ma_provenance ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core' ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core' ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core' ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core' CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core' GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core' GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core' GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core' HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core' ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core' LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core' MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core' PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core' PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core' SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core' THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core' TRP 'L-peptide linking' TRYPTOPHAN 'C11 H12 N2 O2' 204.229 'CCD Core' TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core' VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core' # # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.details 1 polymer man . 50847.659 1 . # # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP GI_PSHV1 Q6UDF5 1 ;MRAKISSQAAVAIFLALVTCCLGTVIKGLGVSGVFEDTLVVFEKVETEDVGARLVFLGDQRPKNPYGGTV RVLFQPGESGTCSIPLLQVRYSNCTNTSAAVFSGCYRTDTEFSVPRANRGTSPGFVSLRTPTMLDSGDIY VTVHLDHLPRPDAFRIKFVSLYTGNETVRISTKDRAGRDRDSYGGASSPVGGRDSNRRTASRNDDGDLPL ALYGPCRPCGKNCKNLREYLLTEESWHEWTSVFAPTTVAPTTTVATTAMRSTTVSFATMTAEVITSTGTV SMEPHNTTTADMVNLTAADPPPSEPVPALNALAIGLVVGGTVASLVFLSVILGGLISCCARRRSARRLLT RSNSAREMEDLAPSSEDARTSRMSPDVVELSELVNGAPLSHRNDIGGDDLTSISSASG ; 'Envelope glycoprotein I' # # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 408 1 408 # # loop_ _ma_target_ref_db_details.target_entity_id _ma_target_ref_db_details.db_name _ma_target_ref_db_details.db_name_other_details _ma_target_ref_db_details.db_code _ma_target_ref_db_details.db_accession _ma_target_ref_db_details.seq_db_isoform _ma_target_ref_db_details.seq_db_align_begin _ma_target_ref_db_details.seq_db_align_end _ma_target_ref_db_details.ncbi_taxonomy_id _ma_target_ref_db_details.organism_scientific _ma_target_ref_db_details.seq_db_sequence_version_date _ma_target_ref_db_details.seq_db_sequence_checksum 1 UNP . GI_PSHV1 Q6UDF5 . 1 408 670426 "Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1)(Pacheco's disease virus)" 2004-07-05 A486BC0EE63CEFAC # # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_strand_id _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can 1 polypeptide(L) no no E ;MRAKISSQAAVAIFLALVTCCLGTVIKGLGVSGVFEDTLVVFEKVETEDVGARLVFLGDQRPKNPYGGTV RVLFQPGESGTCSIPLLQVRYSNCTNTSAAVFSGCYRTDTEFSVPRANRGTSPGFVSLRTPTMLDSGDIY VTVHLDHLPRPDAFRIKFVSLYTGNETVRISTKDRAGRDRDSYGGASSPVGGRDSNRRTASRNDDGDLPL ALYGPCRPCGKNCKNLREYLLTEESWHEWTSVFAPTTVAPTTTVATTAMRSTTVSFATMTAEVITSTGTV SMEPHNTTTADMVNLTAADPPPSEPVPALNALAIGLVVGGTVASLVFLSVILGGLISCCARRRSARRLLT RSNSAREMEDLAPSSEDARTSRMSPDVVELSELVNGAPLSHRNDIGGDDLTSISSASG ; ;MRAKISSQAAVAIFLALVTCCLGTVIKGLGVSGVFEDTLVVFEKVETEDVGARLVFLGDQRPKNPYGGTV RVLFQPGESGTCSIPLLQVRYSNCTNTSAAVFSGCYRTDTEFSVPRANRGTSPGFVSLRTPTMLDSGDIY VTVHLDHLPRPDAFRIKFVSLYTGNETVRISTKDRAGRDRDSYGGASSPVGGRDSNRRTASRNDDGDLPL ALYGPCRPCGKNCKNLREYLLTEESWHEWTSVFAPTTVAPTTTVATTAMRSTTVSFATMTAEVITSTGTV SMEPHNTTTADMVNLTAADPPPSEPVPALNALAIGLVVGGTVASLVFLSVILGGLISCCARRRSARRLLT RSNSAREMEDLAPSSEDARTSRMSPDVVELSELVNGAPLSHRNDIGGDDLTSISSASG ; # # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET . 1 2 ARG . 1 3 ALA . 1 4 LYS . 1 5 ILE . 1 6 SER . 1 7 SER . 1 8 GLN . 1 9 ALA . 1 10 ALA . 1 11 VAL . 1 12 ALA . 1 13 ILE . 1 14 PHE . 1 15 LEU . 1 16 ALA . 1 17 LEU . 1 18 VAL . 1 19 THR . 1 20 CYS . 1 21 CYS . 1 22 LEU . 1 23 GLY . 1 24 THR . 1 25 VAL . 1 26 ILE . 1 27 LYS . 1 28 GLY . 1 29 LEU . 1 30 GLY . 1 31 VAL . 1 32 SER . 1 33 GLY . 1 34 VAL . 1 35 PHE . 1 36 GLU . 1 37 ASP . 1 38 THR . 1 39 LEU . 1 40 VAL . 1 41 VAL . 1 42 PHE . 1 43 GLU . 1 44 LYS . 1 45 VAL . 1 46 GLU . 1 47 THR . 1 48 GLU . 1 49 ASP . 1 50 VAL . 1 51 GLY . 1 52 ALA . 1 53 ARG . 1 54 LEU . 1 55 VAL . 1 56 PHE . 1 57 LEU . 1 58 GLY . 1 59 ASP . 1 60 GLN . 1 61 ARG . 1 62 PRO . 1 63 LYS . 1 64 ASN . 1 65 PRO . 1 66 TYR . 1 67 GLY . 1 68 GLY . 1 69 THR . 1 70 VAL . 1 71 ARG . 1 72 VAL . 1 73 LEU . 1 74 PHE . 1 75 GLN . 1 76 PRO . 1 77 GLY . 1 78 GLU . 1 79 SER . 1 80 GLY . 1 81 THR . 1 82 CYS . 1 83 SER . 1 84 ILE . 1 85 PRO . 1 86 LEU . 1 87 LEU . 1 88 GLN . 1 89 VAL . 1 90 ARG . 1 91 TYR . 1 92 SER . 1 93 ASN . 1 94 CYS . 1 95 THR . 1 96 ASN . 1 97 THR . 1 98 SER . 1 99 ALA . 1 100 ALA . 1 101 VAL . 1 102 PHE . 1 103 SER . 1 104 GLY . 1 105 CYS . 1 106 TYR . 1 107 ARG . 1 108 THR . 1 109 ASP . 1 110 THR . 1 111 GLU . 1 112 PHE . 1 113 SER . 1 114 VAL . 1 115 PRO . 1 116 ARG . 1 117 ALA . 1 118 ASN . 1 119 ARG . 1 120 GLY . 1 121 THR . 1 122 SER . 1 123 PRO . 1 124 GLY . 1 125 PHE . 1 126 VAL . 1 127 SER . 1 128 LEU . 1 129 ARG . 1 130 THR . 1 131 PRO . 1 132 THR . 1 133 MET . 1 134 LEU . 1 135 ASP . 1 136 SER . 1 137 GLY . 1 138 ASP . 1 139 ILE . 1 140 TYR . 1 141 VAL . 1 142 THR . 1 143 VAL . 1 144 HIS . 1 145 LEU . 1 146 ASP . 1 147 HIS . 1 148 LEU . 1 149 PRO . 1 150 ARG . 1 151 PRO . 1 152 ASP . 1 153 ALA . 1 154 PHE . 1 155 ARG . 1 156 ILE . 1 157 LYS . 1 158 PHE . 1 159 VAL . 1 160 SER . 1 161 LEU . 1 162 TYR . 1 163 THR . 1 164 GLY . 1 165 ASN . 1 166 GLU . 1 167 THR . 1 168 VAL . 1 169 ARG . 1 170 ILE . 1 171 SER . 1 172 THR . 1 173 LYS . 1 174 ASP . 1 175 ARG . 1 176 ALA . 1 177 GLY . 1 178 ARG . 1 179 ASP . 1 180 ARG . 1 181 ASP . 1 182 SER . 1 183 TYR . 1 184 GLY . 1 185 GLY . 1 186 ALA . 1 187 SER . 1 188 SER . 1 189 PRO . 1 190 VAL . 1 191 GLY . 1 192 GLY . 1 193 ARG . 1 194 ASP . 1 195 SER . 1 196 ASN . 1 197 ARG . 1 198 ARG . 1 199 THR . 1 200 ALA . 1 201 SER . 1 202 ARG . 1 203 ASN . 1 204 ASP . 1 205 ASP . 1 206 GLY . 1 207 ASP . 1 208 LEU . 1 209 PRO . 1 210 LEU . 1 211 ALA . 1 212 LEU . 1 213 TYR . 1 214 GLY . 1 215 PRO . 1 216 CYS . 1 217 ARG . 1 218 PRO . 1 219 CYS . 1 220 GLY . 1 221 LYS . 1 222 ASN . 1 223 CYS . 1 224 LYS . 1 225 ASN . 1 226 LEU . 1 227 ARG . 1 228 GLU . 1 229 TYR . 1 230 LEU . 1 231 LEU . 1 232 THR . 1 233 GLU . 1 234 GLU . 1 235 SER . 1 236 TRP . 1 237 HIS . 1 238 GLU . 1 239 TRP . 1 240 THR . 1 241 SER . 1 242 VAL . 1 243 PHE . 1 244 ALA . 1 245 PRO . 1 246 THR . 1 247 THR . 1 248 VAL . 1 249 ALA . 1 250 PRO . 1 251 THR . 1 252 THR . 1 253 THR . 1 254 VAL . 1 255 ALA . 1 256 THR . 1 257 THR . 1 258 ALA . 1 259 MET . 1 260 ARG . 1 261 SER . 1 262 THR . 1 263 THR . 1 264 VAL . 1 265 SER . 1 266 PHE . 1 267 ALA . 1 268 THR . 1 269 MET . 1 270 THR . 1 271 ALA . 1 272 GLU . 1 273 VAL . 1 274 ILE . 1 275 THR . 1 276 SER . 1 277 THR . 1 278 GLY . 1 279 THR . 1 280 VAL . 1 281 SER . 1 282 MET . 1 283 GLU . 1 284 PRO . 1 285 HIS . 1 286 ASN . 1 287 THR . 1 288 THR . 1 289 THR . 1 290 ALA . 1 291 ASP . 1 292 MET . 1 293 VAL . 1 294 ASN . 1 295 LEU . 1 296 THR . 1 297 ALA . 1 298 ALA . 1 299 ASP . 1 300 PRO . 1 301 PRO . 1 302 PRO . 1 303 SER . 1 304 GLU . 1 305 PRO . 1 306 VAL . 1 307 PRO . 1 308 ALA . 1 309 LEU . 1 310 ASN . 1 311 ALA . 1 312 LEU . 1 313 ALA . 1 314 ILE . 1 315 GLY . 1 316 LEU . 1 317 VAL . 1 318 VAL . 1 319 GLY . 1 320 GLY . 1 321 THR . 1 322 VAL . 1 323 ALA . 1 324 SER . 1 325 LEU . 1 326 VAL . 1 327 PHE . 1 328 LEU . 1 329 SER . 1 330 VAL . 1 331 ILE . 1 332 LEU . 1 333 GLY . 1 334 GLY . 1 335 LEU . 1 336 ILE . 1 337 SER . 1 338 CYS . 1 339 CYS . 1 340 ALA . 1 341 ARG . 1 342 ARG . 1 343 ARG . 1 344 SER . 1 345 ALA . 1 346 ARG . 1 347 ARG . 1 348 LEU . 1 349 LEU . 1 350 THR . 1 351 ARG . 1 352 SER . 1 353 ASN . 1 354 SER . 1 355 ALA . 1 356 ARG . 1 357 GLU . 1 358 MET . 1 359 GLU . 1 360 ASP . 1 361 LEU . 1 362 ALA . 1 363 PRO . 1 364 SER . 1 365 SER . 1 366 GLU . 1 367 ASP . 1 368 ALA . 1 369 ARG . 1 370 THR . 1 371 SER . 1 372 ARG . 1 373 MET . 1 374 SER . 1 375 PRO . 1 376 ASP . 1 377 VAL . 1 378 VAL . 1 379 GLU . 1 380 LEU . 1 381 SER . 1 382 GLU . 1 383 LEU . 1 384 VAL . 1 385 ASN . 1 386 GLY . 1 387 ALA . 1 388 PRO . 1 389 LEU . 1 390 SER . 1 391 HIS . 1 392 ARG . 1 393 ASN . 1 394 ASP . 1 395 ILE . 1 396 GLY . 1 397 GLY . 1 398 ASP . 1 399 ASP . 1 400 LEU . 1 401 THR . 1 402 SER . 1 403 ILE . 1 404 SER . 1 405 SER . 1 406 ALA . 1 407 SER . 1 408 GLY . # # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 . # # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 ? ? ? E . A 1 2 ARG 2 ? ? ? E . A 1 3 ALA 3 ? ? ? E . A 1 4 LYS 4 ? ? ? E . A 1 5 ILE 5 ? ? ? E . A 1 6 SER 6 ? ? ? E . A 1 7 SER 7 ? ? ? E . A 1 8 GLN 8 ? ? ? E . A 1 9 ALA 9 ? ? ? E . A 1 10 ALA 10 ? ? ? E . A 1 11 VAL 11 ? ? ? E . A 1 12 ALA 12 ? ? ? E . A 1 13 ILE 13 ? ? ? E . A 1 14 PHE 14 ? ? ? E . A 1 15 LEU 15 ? ? ? E . A 1 16 ALA 16 ? ? ? E . A 1 17 LEU 17 ? ? ? E . A 1 18 VAL 18 ? ? ? E . A 1 19 THR 19 ? ? ? E . A 1 20 CYS 20 ? ? ? E . A 1 21 CYS 21 ? ? ? E . A 1 22 LEU 22 ? ? ? E . A 1 23 GLY 23 ? ? ? E . A 1 24 THR 24 ? ? ? E . A 1 25 VAL 25 ? ? ? E . A 1 26 ILE 26 ? ? ? E . A 1 27 LYS 27 ? ? ? E . A 1 28 GLY 28 ? ? ? E . A 1 29 LEU 29 ? ? ? E . A 1 30 GLY 30 ? ? ? E . A 1 31 VAL 31 ? ? ? E . A 1 32 SER 32 ? ? ? E . A 1 33 GLY 33 ? ? ? E . A 1 34 VAL 34 ? ? ? E . A 1 35 PHE 35 ? ? ? E . A 1 36 GLU 36 ? ? ? E . A 1 37 ASP 37 ? ? ? E . A 1 38 THR 38 ? ? ? E . A 1 39 LEU 39 ? ? ? E . A 1 40 VAL 40 ? ? ? E . A 1 41 VAL 41 ? ? ? E . A 1 42 PHE 42 ? ? ? E . A 1 43 GLU 43 ? ? ? E . A 1 44 LYS 44 ? ? ? E . A 1 45 VAL 45 ? ? ? E . A 1 46 GLU 46 ? ? ? E . A 1 47 THR 47 ? ? ? E . A 1 48 GLU 48 ? ? ? E . A 1 49 ASP 49 ? ? ? E . A 1 50 VAL 50 ? ? ? E . A 1 51 GLY 51 ? ? ? E . A 1 52 ALA 52 ? ? ? E . A 1 53 ARG 53 ? ? ? E . A 1 54 LEU 54 ? ? ? E . A 1 55 VAL 55 ? ? ? E . A 1 56 PHE 56 ? ? ? E . A 1 57 LEU 57 ? ? ? E . A 1 58 GLY 58 ? ? ? E . A 1 59 ASP 59 ? ? ? E . A 1 60 GLN 60 ? ? ? E . A 1 61 ARG 61 ? ? ? E . A 1 62 PRO 62 ? ? ? E . A 1 63 LYS 63 ? ? ? E . A 1 64 ASN 64 ? ? ? E . A 1 65 PRO 65 ? ? ? E . A 1 66 TYR 66 ? ? ? E . A 1 67 GLY 67 ? ? ? E . A 1 68 GLY 68 ? ? ? E . A 1 69 THR 69 ? ? ? E . A 1 70 VAL 70 ? ? ? E . A 1 71 ARG 71 ? ? ? E . A 1 72 VAL 72 ? ? ? E . A 1 73 LEU 73 ? ? ? E . A 1 74 PHE 74 ? ? ? E . A 1 75 GLN 75 ? ? ? E . A 1 76 PRO 76 ? ? ? E . A 1 77 GLY 77 ? ? ? E . A 1 78 GLU 78 ? ? ? E . A 1 79 SER 79 ? ? ? E . A 1 80 GLY 80 ? ? ? E . A 1 81 THR 81 ? ? ? E . A 1 82 CYS 82 ? ? ? E . A 1 83 SER 83 ? ? ? E . A 1 84 ILE 84 ? ? ? E . A 1 85 PRO 85 ? ? ? E . A 1 86 LEU 86 ? ? ? E . A 1 87 LEU 87 ? ? ? E . A 1 88 GLN 88 ? ? ? E . A 1 89 VAL 89 ? ? ? E . A 1 90 ARG 90 ? ? ? E . A 1 91 TYR 91 ? ? ? E . A 1 92 SER 92 ? ? ? E . A 1 93 ASN 93 ? ? ? E . A 1 94 CYS 94 ? ? ? E . A 1 95 THR 95 ? ? ? E . A 1 96 ASN 96 ? ? ? E . A 1 97 THR 97 ? ? ? E . A 1 98 SER 98 ? ? ? E . A 1 99 ALA 99 ? ? ? E . A 1 100 ALA 100 ? ? ? E . A 1 101 VAL 101 ? ? ? E . A 1 102 PHE 102 ? ? ? E . A 1 103 SER 103 ? ? ? E . A 1 104 GLY 104 ? ? ? E . A 1 105 CYS 105 ? ? ? E . A 1 106 TYR 106 ? ? ? E . A 1 107 ARG 107 ? ? ? E . A 1 108 THR 108 ? ? ? E . A 1 109 ASP 109 ? ? ? E . A 1 110 THR 110 ? ? ? E . A 1 111 GLU 111 ? ? ? E . A 1 112 PHE 112 ? ? ? E . A 1 113 SER 113 ? ? ? E . A 1 114 VAL 114 ? ? ? E . A 1 115 PRO 115 ? ? ? E . A 1 116 ARG 116 ? ? ? E . A 1 117 ALA 117 ? ? ? E . A 1 118 ASN 118 ? ? ? E . A 1 119 ARG 119 ? ? ? E . A 1 120 GLY 120 ? ? ? E . A 1 121 THR 121 ? ? ? E . A 1 122 SER 122 ? ? ? E . A 1 123 PRO 123 ? ? ? E . A 1 124 GLY 124 ? ? ? E . A 1 125 PHE 125 ? ? ? E . A 1 126 VAL 126 ? ? ? E . A 1 127 SER 127 ? ? ? E . A 1 128 LEU 128 ? ? ? E . A 1 129 ARG 129 ? ? ? E . A 1 130 THR 130 ? ? ? E . A 1 131 PRO 131 ? ? ? E . A 1 132 THR 132 ? ? ? E . A 1 133 MET 133 ? ? ? E . A 1 134 LEU 134 ? ? ? E . A 1 135 ASP 135 ? ? ? E . A 1 136 SER 136 ? ? ? E . A 1 137 GLY 137 ? ? ? E . A 1 138 ASP 138 ? ? ? E . A 1 139 ILE 139 ? ? ? E . A 1 140 TYR 140 ? ? ? E . A 1 141 VAL 141 ? ? ? E . A 1 142 THR 142 ? ? ? E . A 1 143 VAL 143 ? ? ? E . A 1 144 HIS 144 ? ? ? E . A 1 145 LEU 145 ? ? ? E . A 1 146 ASP 146 ? ? ? E . A 1 147 HIS 147 ? ? ? E . A 1 148 LEU 148 ? ? ? E . A 1 149 PRO 149 ? ? ? E . A 1 150 ARG 150 ? ? ? E . A 1 151 PRO 151 ? ? ? E . A 1 152 ASP 152 ? ? ? E . A 1 153 ALA 153 ? ? ? E . A 1 154 PHE 154 ? ? ? E . A 1 155 ARG 155 ? ? ? E . A 1 156 ILE 156 ? ? ? E . A 1 157 LYS 157 ? ? ? E . A 1 158 PHE 158 ? ? ? E . A 1 159 VAL 159 ? ? ? E . A 1 160 SER 160 ? ? ? E . A 1 161 LEU 161 ? ? ? E . A 1 162 TYR 162 ? ? ? E . A 1 163 THR 163 ? ? ? E . A 1 164 GLY 164 ? ? ? E . A 1 165 ASN 165 ? ? ? E . A 1 166 GLU 166 ? ? ? E . A 1 167 THR 167 ? ? ? E . A 1 168 VAL 168 ? ? ? E . A 1 169 ARG 169 ? ? ? E . A 1 170 ILE 170 ? ? ? E . A 1 171 SER 171 ? ? ? E . A 1 172 THR 172 ? ? ? E . A 1 173 LYS 173 ? ? ? E . A 1 174 ASP 174 ? ? ? E . A 1 175 ARG 175 ? ? ? E . A 1 176 ALA 176 ? ? ? E . A 1 177 GLY 177 ? ? ? E . A 1 178 ARG 178 ? ? ? E . A 1 179 ASP 179 ? ? ? E . A 1 180 ARG 180 ? ? ? E . A 1 181 ASP 181 ? ? ? E . A 1 182 SER 182 ? ? ? E . A 1 183 TYR 183 ? ? ? E . A 1 184 GLY 184 ? ? ? E . A 1 185 GLY 185 ? ? ? E . A 1 186 ALA 186 ? ? ? E . A 1 187 SER 187 ? ? ? E . A 1 188 SER 188 ? ? ? E . A 1 189 PRO 189 ? ? ? E . A 1 190 VAL 190 ? ? ? E . A 1 191 GLY 191 ? ? ? E . A 1 192 GLY 192 ? ? ? E . A 1 193 ARG 193 ? ? ? E . A 1 194 ASP 194 ? ? ? E . A 1 195 SER 195 ? ? ? E . A 1 196 ASN 196 ? ? ? E . A 1 197 ARG 197 ? ? ? E . A 1 198 ARG 198 ? ? ? E . A 1 199 THR 199 ? ? ? E . A 1 200 ALA 200 ? ? ? E . A 1 201 SER 201 ? ? ? E . A 1 202 ARG 202 ? ? ? E . A 1 203 ASN 203 ? ? ? E . A 1 204 ASP 204 ? ? ? E . A 1 205 ASP 205 ? ? ? E . A 1 206 GLY 206 ? ? ? E . A 1 207 ASP 207 ? ? ? E . A 1 208 LEU 208 ? ? ? E . A 1 209 PRO 209 ? ? ? E . A 1 210 LEU 210 ? ? ? E . A 1 211 ALA 211 ? ? ? E . A 1 212 LEU 212 ? ? ? E . A 1 213 TYR 213 ? ? ? E . A 1 214 GLY 214 ? ? ? E . A 1 215 PRO 215 ? ? ? E . A 1 216 CYS 216 ? ? ? E . A 1 217 ARG 217 ? ? ? E . A 1 218 PRO 218 ? ? ? E . A 1 219 CYS 219 ? ? ? E . A 1 220 GLY 220 ? ? ? E . A 1 221 LYS 221 ? ? ? E . A 1 222 ASN 222 ? ? ? E . A 1 223 CYS 223 ? ? ? E . A 1 224 LYS 224 ? ? ? E . A 1 225 ASN 225 ? ? ? E . A 1 226 LEU 226 ? ? ? E . A 1 227 ARG 227 ? ? ? E . A 1 228 GLU 228 ? ? ? E . A 1 229 TYR 229 ? ? ? E . A 1 230 LEU 230 ? ? ? E . A 1 231 LEU 231 ? ? ? E . A 1 232 THR 232 ? ? ? E . A 1 233 GLU 233 ? ? ? E . A 1 234 GLU 234 ? ? ? E . A 1 235 SER 235 ? ? ? E . A 1 236 TRP 236 ? ? ? E . A 1 237 HIS 237 ? ? ? E . A 1 238 GLU 238 ? ? ? E . A 1 239 TRP 239 ? ? ? E . A 1 240 THR 240 ? ? ? E . A 1 241 SER 241 ? ? ? E . A 1 242 VAL 242 ? ? ? E . A 1 243 PHE 243 ? ? ? E . A 1 244 ALA 244 ? ? ? E . A 1 245 PRO 245 ? ? ? E . A 1 246 THR 246 ? ? ? E . A 1 247 THR 247 ? ? ? E . A 1 248 VAL 248 ? ? ? E . A 1 249 ALA 249 ? ? ? E . A 1 250 PRO 250 ? ? ? E . A 1 251 THR 251 ? ? ? E . A 1 252 THR 252 ? ? ? E . A 1 253 THR 253 ? ? ? E . A 1 254 VAL 254 ? ? ? E . A 1 255 ALA 255 ? ? ? E . A 1 256 THR 256 ? ? ? E . A 1 257 THR 257 ? ? ? E . A 1 258 ALA 258 ? ? ? E . A 1 259 MET 259 ? ? ? E . A 1 260 ARG 260 ? ? ? E . A 1 261 SER 261 ? ? ? E . A 1 262 THR 262 ? ? ? E . A 1 263 THR 263 ? ? ? E . A 1 264 VAL 264 ? ? ? E . A 1 265 SER 265 ? ? ? E . A 1 266 PHE 266 ? ? ? E . A 1 267 ALA 267 ? ? ? E . A 1 268 THR 268 ? ? ? E . A 1 269 MET 269 ? ? ? E . A 1 270 THR 270 ? ? ? E . A 1 271 ALA 271 ? ? ? E . A 1 272 GLU 272 ? ? ? E . A 1 273 VAL 273 ? ? ? E . A 1 274 ILE 274 ? ? ? E . A 1 275 THR 275 ? ? ? E . A 1 276 SER 276 ? ? ? E . A 1 277 THR 277 ? ? ? E . A 1 278 GLY 278 ? ? ? E . A 1 279 THR 279 ? ? ? E . A 1 280 VAL 280 ? ? ? E . A 1 281 SER 281 ? ? ? E . A 1 282 MET 282 ? ? ? E . A 1 283 GLU 283 ? ? ? E . A 1 284 PRO 284 ? ? ? E . A 1 285 HIS 285 ? ? ? E . A 1 286 ASN 286 ? ? ? E . A 1 287 THR 287 ? ? ? E . A 1 288 THR 288 ? ? ? E . A 1 289 THR 289 ? ? ? E . A 1 290 ALA 290 ? ? ? E . A 1 291 ASP 291 ? ? ? E . A 1 292 MET 292 ? ? ? E . A 1 293 VAL 293 ? ? ? E . A 1 294 ASN 294 ? ? ? E . A 1 295 LEU 295 ? ? ? E . A 1 296 THR 296 ? ? ? E . A 1 297 ALA 297 ? ? ? E . A 1 298 ALA 298 ? ? ? E . A 1 299 ASP 299 ? ? ? E . A 1 300 PRO 300 ? ? ? E . A 1 301 PRO 301 ? ? ? E . A 1 302 PRO 302 ? ? ? E . A 1 303 SER 303 ? ? ? E . A 1 304 GLU 304 ? ? ? E . A 1 305 PRO 305 ? ? ? E . A 1 306 VAL 306 ? ? ? E . A 1 307 PRO 307 ? ? ? E . A 1 308 ALA 308 ? ? ? E . A 1 309 LEU 309 ? ? ? E . A 1 310 ASN 310 ? ? ? E . A 1 311 ALA 311 ? ? ? E . A 1 312 LEU 312 ? ? ? E . A 1 313 ALA 313 ? ? ? E . A 1 314 ILE 314 ? ? ? E . A 1 315 GLY 315 ? ? ? E . A 1 316 LEU 316 ? ? ? E . A 1 317 VAL 317 ? ? ? E . A 1 318 VAL 318 ? ? ? E . A 1 319 GLY 319 ? ? ? E . A 1 320 GLY 320 320 GLY GLY E . A 1 321 THR 321 321 THR THR E . A 1 322 VAL 322 322 VAL VAL E . A 1 323 ALA 323 323 ALA ALA E . A 1 324 SER 324 324 SER SER E . A 1 325 LEU 325 325 LEU LEU E . A 1 326 VAL 326 326 VAL VAL E . A 1 327 PHE 327 327 PHE PHE E . A 1 328 LEU 328 328 LEU LEU E . A 1 329 SER 329 329 SER SER E . A 1 330 VAL 330 330 VAL VAL E . A 1 331 ILE 331 331 ILE ILE E . A 1 332 LEU 332 332 LEU LEU E . A 1 333 GLY 333 333 GLY GLY E . A 1 334 GLY 334 334 GLY GLY E . A 1 335 LEU 335 335 LEU LEU E . A 1 336 ILE 336 336 ILE ILE E . A 1 337 SER 337 337 SER SER E . A 1 338 CYS 338 338 CYS CYS E . A 1 339 CYS 339 339 CYS CYS E . A 1 340 ALA 340 340 ALA ALA E . A 1 341 ARG 341 341 ARG ARG E . A 1 342 ARG 342 ? ? ? E . A 1 343 ARG 343 ? ? ? E . A 1 344 SER 344 ? ? ? E . A 1 345 ALA 345 ? ? ? E . A 1 346 ARG 346 ? ? ? E . A 1 347 ARG 347 ? ? ? E . A 1 348 LEU 348 ? ? ? E . A 1 349 LEU 349 ? ? ? E . A 1 350 THR 350 ? ? ? E . A 1 351 ARG 351 ? ? ? E . A 1 352 SER 352 ? ? ? E . A 1 353 ASN 353 ? ? ? E . A 1 354 SER 354 ? ? ? E . A 1 355 ALA 355 ? ? ? E . A 1 356 ARG 356 ? ? ? E . A 1 357 GLU 357 ? ? ? E . A 1 358 MET 358 ? ? ? E . A 1 359 GLU 359 ? ? ? E . A 1 360 ASP 360 ? ? ? E . A 1 361 LEU 361 ? ? ? E . A 1 362 ALA 362 ? ? ? E . A 1 363 PRO 363 ? ? ? E . A 1 364 SER 364 ? ? ? E . A 1 365 SER 365 ? ? ? E . A 1 366 GLU 366 ? ? ? E . A 1 367 ASP 367 ? ? ? E . A 1 368 ALA 368 ? ? ? E . A 1 369 ARG 369 ? ? ? E . A 1 370 THR 370 ? ? ? E . A 1 371 SER 371 ? ? ? E . A 1 372 ARG 372 ? ? ? E . A 1 373 MET 373 ? ? ? E . A 1 374 SER 374 ? ? ? E . A 1 375 PRO 375 ? ? ? E . A 1 376 ASP 376 ? ? ? E . A 1 377 VAL 377 ? ? ? E . A 1 378 VAL 378 ? ? ? E . A 1 379 GLU 379 ? ? ? E . A 1 380 LEU 380 ? ? ? E . A 1 381 SER 381 ? ? ? E . A 1 382 GLU 382 ? ? ? E . A 1 383 LEU 383 ? ? ? E . A 1 384 VAL 384 ? ? ? E . A 1 385 ASN 385 ? ? ? E . A 1 386 GLY 386 ? ? ? E . A 1 387 ALA 387 ? ? ? E . A 1 388 PRO 388 ? ? ? E . A 1 389 LEU 389 ? ? ? E . A 1 390 SER 390 ? ? ? E . A 1 391 HIS 391 ? ? ? E . A 1 392 ARG 392 ? ? ? E . A 1 393 ASN 393 ? ? ? E . A 1 394 ASP 394 ? ? ? E . A 1 395 ILE 395 ? ? ? E . A 1 396 GLY 396 ? ? ? E . A 1 397 GLY 397 ? ? ? E . A 1 398 ASP 398 ? ? ? E . A 1 399 ASP 399 ? ? ? E . A 1 400 LEU 400 ? ? ? E . A 1 401 THR 401 ? ? ? E . A 1 402 SER 402 ? ? ? E . A 1 403 ILE 403 ? ? ? E . A 1 404 SER 404 ? ? ? E . A 1 405 SER 405 ? ? ? E . A 1 406 ALA 406 ? ? ? E . A 1 407 SER 407 ? ? ? E . A 1 408 GLY 408 ? ? ? E . # # loop_ _ma_data.id _ma_data.name _ma_data.content_type _ma_data.content_type_other_details 1 'T-cell surface glycoprotein CD3 delta chain {PDB ID=8es9, label_asym_id=E, auth_asym_id=D, SMTL ID=8es9.1.E}' 'template structure' . 2 . target . 3 'Target-template alignment by HHblits to 8es9, label_asym_id=E' 'target-template alignment' . 4 'model 3' 'model coordinates' . 5 SMTL 'reference database' . 6 PDB 'reference database' . 7 'Template search output' other 'Results of the sequence search' # # loop_ _ma_data_group.ordinal_id _ma_data_group.group_id _ma_data_group.data_id 1 1 2 2 1 5 3 1 6 4 2 7 5 3 2 6 3 1 7 3 3 8 4 1 9 4 3 10 5 4 # # loop_ _ma_data_ref_db.data_id _ma_data_ref_db.name _ma_data_ref_db.location_url _ma_data_ref_db.version _ma_data_ref_db.release_date 5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-11 6 PDB https://www.wwpdb.org . 2024-12-06 # # loop_ _ma_target_entity.entity_id _ma_target_entity.data_id _ma_target_entity.origin 1 2 'reference database' # # loop_ _ma_target_entity_instance.asym_id _ma_target_entity_instance.entity_id _ma_target_entity_instance.details A 1 . # # loop_ _ma_template_trans_matrix.id _ma_template_trans_matrix.rot_matrix[1][1] _ma_template_trans_matrix.rot_matrix[2][1] _ma_template_trans_matrix.rot_matrix[3][1] _ma_template_trans_matrix.rot_matrix[1][2] _ma_template_trans_matrix.rot_matrix[2][2] _ma_template_trans_matrix.rot_matrix[3][2] _ma_template_trans_matrix.rot_matrix[1][3] _ma_template_trans_matrix.rot_matrix[2][3] _ma_template_trans_matrix.rot_matrix[3][3] _ma_template_trans_matrix.tr_vector[1] _ma_template_trans_matrix.tr_vector[2] _ma_template_trans_matrix.tr_vector[3] 1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0 0 0 # # loop_ _ma_template_details.ordinal_id _ma_template_details.template_id _ma_template_details.template_origin _ma_template_details.template_entity_type _ma_template_details.template_trans_matrix_id _ma_template_details.template_data_id _ma_template_details.target_asym_id _ma_template_details.template_label_asym_id _ma_template_details.template_label_entity_id _ma_template_details.template_model_num _ma_template_details.template_auth_asym_id 1 1 'reference database' polymer 1 1 A E 4 1 D # # loop_ _ma_template_poly.template_id _ma_template_poly.seq_one_letter_code _ma_template_poly.seq_one_letter_code_can 1 ;MEHSTFLSGLVLATLLSQVSPFKIPIEELEDRVFVNCNTSITWVEGTVGTLLSDITRLDLGKRILDPRGI YRCNGTDIYKDKESTVQVHYRMCQSCVELDPATVAGIIVTDVIATLLLALGVFCFAGHETGRLSGAADTQ ALLRNDQVYQPLRDRDDAQYSHLGGNWARNKGSG ; ;MEHSTFLSGLVLATLLSQVSPFKIPIEELEDRVFVNCNTSITWVEGTVGTLLSDITRLDLGKRILDPRGI YRCNGTDIYKDKESTVQVHYRMCQSCVELDPATVAGIIVTDVIATLLLALGVFCFAGHETGRLSGAADTQ ALLRNDQVYQPLRDRDDAQYSHLGGNWARNKGSG ; # # loop_ _ma_template_poly_segment.id _ma_template_poly_segment.template_id _ma_template_poly_segment.residue_number_begin _ma_template_poly_segment.residue_number_end 1 1 106 132 # # loop_ _ma_template_ref_db_details.template_id _ma_template_ref_db_details.db_name _ma_template_ref_db_details.db_name_other_details _ma_template_ref_db_details.db_accession_code _ma_template_ref_db_details.db_version_date 1 PDB . 8es9 2024-10-30 # # loop_ _ma_target_template_poly_mapping.id _ma_target_template_poly_mapping.template_segment_id _ma_target_template_poly_mapping.target_asym_id _ma_target_template_poly_mapping.target_seq_id_begin _ma_target_template_poly_mapping.target_seq_id_end 1 1 A 1 408 # # loop_ _ma_alignment_info.alignment_id _ma_alignment_info.data_id _ma_alignment_info.software_group_id _ma_alignment_info.alignment_length _ma_alignment_info.alignment_type _ma_alignment_info.alignment_mode 1 3 1 408 'target-template pairwise alignment' local # # loop_ _ma_alignment_details.ordinal_id _ma_alignment_details.alignment_id _ma_alignment_details.template_segment_id _ma_alignment_details.target_asym_id _ma_alignment_details.score_type _ma_alignment_details.score_type_other_details _ma_alignment_details.score_value _ma_alignment_details.percent_sequence_identity _ma_alignment_details.sequence_identity_denominator _ma_alignment_details.sequence_identity_denominator_other_details 1 1 1 A 'HHblits e-value' . 5.400 22.222 'Number of aligned residue pairs (not including the gaps)' . # # loop_ _ma_alignment.ordinal_id _ma_alignment.alignment_id _ma_alignment.target_template_flag _ma_alignment.sequence 1 1 1 MRAKISSQAAVAIFLALVTCCLGTVIKGLGVSGVFEDTLVVFEKVETEDVGARLVFLGDQRPKNPYGGTVRVLFQPGESGTCSIPLLQVRYSNCTNTSAAVFSGCYRTDTEFSVPRANRGTSPGFVSLRTPTMLDSGDIYVTVHLDHLPRPDAFRIKFVSLYTGNETVRISTKDRAGRDRDSYGGASSPVGGRDSNRRTASRNDDGDLPLALYGPCRPCGKNCKNLREYLLTEESWHEWTSVFAPTTVAPTTTVATTAMRSTTVSFATMTAEVITSTGTVSMEPHNTTTADMVNLTAADPPPSEPVPALNALAIGLVVGGTVASLVFLSVILGGLISCCARRRSARRLLTRSNSAREMEDLAPSSEDARTSRMSPDVVELSELVNGAPLSHRNDIGGDDLTSISSASG 2 1 2 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIIVTDVIATLLLALGVFCFAGHETGR-------------------------------------------------------------- # # loop_ _ma_protocol_step.ordinal_id _ma_protocol_step.protocol_id _ma_protocol_step.step_id _ma_protocol_step.method_type _ma_protocol_step.step_name _ma_protocol_step.details _ma_protocol_step.software_group_id _ma_protocol_step.input_data_group_id _ma_protocol_step.output_data_group_id 1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2 1 2 2 1 2 'template selection' 'template selection' 'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4 3 1 3 modeling 'homology modeling' 'SWISS-MODEL auto-model mode using ProMod3 on 8es9.1' 4 3 5 # # loop_ _ma_model_list.ordinal_id _ma_model_list.model_id _ma_model_list.model_group_id _ma_model_list.model_name _ma_model_list.model_group_name _ma_model_list.data_id _ma_model_list.model_type _ma_model_list.model_type_other_details 1 1 1 'model 3' . 4 'Homology model' . # # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.auth_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.label_entity_id _atom_site.auth_asym_id _atom_site.auth_comp_id _atom_site.B_iso_or_equiv _atom_site.pdbx_PDB_model_num ATOM 1 N N . GLY 320 320 ? A 186.934 194.925 206.378 1 1 E GLY 0.340 1 ATOM 2 C CA . GLY 320 320 ? A 186.405 194.338 207.672 1 1 E GLY 0.340 1 ATOM 3 C C . GLY 320 320 ? A 187.437 193.618 208.508 1 1 E GLY 0.340 1 ATOM 4 O O . GLY 320 320 ? A 187.618 193.972 209.658 1 1 E GLY 0.340 1 ATOM 5 N N . THR 321 321 ? A 188.182 192.642 207.925 1 1 E THR 0.440 1 ATOM 6 C CA . THR 321 321 ? A 189.266 191.905 208.598 1 1 E THR 0.440 1 ATOM 7 C C . THR 321 321 ? A 190.364 192.755 209.176 1 1 E THR 0.440 1 ATOM 8 O O . THR 321 321 ? A 190.783 192.560 210.308 1 1 E THR 0.440 1 ATOM 9 C CB . THR 321 321 ? A 189.945 190.944 207.633 1 1 E THR 0.440 1 ATOM 10 O OG1 . THR 321 321 ? A 188.952 190.141 207.016 1 1 E THR 0.440 1 ATOM 11 C CG2 . THR 321 321 ? A 190.949 190.010 208.331 1 1 E THR 0.440 1 ATOM 12 N N . VAL 322 322 ? A 190.874 193.762 208.449 1 1 E VAL 0.580 1 ATOM 13 C CA . VAL 322 322 ? A 191.875 194.652 209.020 1 1 E VAL 0.580 1 ATOM 14 C C . VAL 322 322 ? A 191.357 195.486 210.196 1 1 E VAL 0.580 1 ATOM 15 O O . VAL 322 322 ? A 192.001 195.565 211.236 1 1 E VAL 0.580 1 ATOM 16 C CB . VAL 322 322 ? A 192.509 195.505 207.935 1 1 E VAL 0.580 1 ATOM 17 C CG1 . VAL 322 322 ? A 193.547 196.476 208.535 1 1 E VAL 0.580 1 ATOM 18 C CG2 . VAL 322 322 ? A 193.206 194.540 206.952 1 1 E VAL 0.580 1 ATOM 19 N N . ALA 323 323 ? A 190.146 196.080 210.100 1 1 E ALA 0.600 1 ATOM 20 C CA . ALA 323 323 ? A 189.551 196.862 211.171 1 1 E ALA 0.600 1 ATOM 21 C C . ALA 323 323 ? A 189.262 196.036 212.427 1 1 E ALA 0.600 1 ATOM 22 O O . ALA 323 323 ? A 189.496 196.493 213.542 1 1 E ALA 0.600 1 ATOM 23 C CB . ALA 323 323 ? A 188.280 197.596 210.684 1 1 E ALA 0.600 1 ATOM 24 N N . SER 324 324 ? A 188.794 194.772 212.269 1 1 E SER 0.570 1 ATOM 25 C CA . SER 324 324 ? A 188.635 193.829 213.374 1 1 E SER 0.570 1 ATOM 26 C C . SER 324 324 ? A 189.960 193.510 214.063 1 1 E SER 0.570 1 ATOM 27 O O . SER 324 324 ? A 190.039 193.550 215.287 1 1 E SER 0.570 1 ATOM 28 C CB . SER 324 324 ? A 187.876 192.514 212.995 1 1 E SER 0.570 1 ATOM 29 O OG . SER 324 324 ? A 188.566 191.714 212.036 1 1 E SER 0.570 1 ATOM 30 N N . LEU 325 325 ? A 191.054 193.270 213.301 1 1 E LEU 0.590 1 ATOM 31 C CA . LEU 325 325 ? A 192.406 193.094 213.830 1 1 E LEU 0.590 1 ATOM 32 C C . LEU 325 325 ? A 192.944 194.291 214.599 1 1 E LEU 0.590 1 ATOM 33 O O . LEU 325 325 ? A 193.526 194.130 215.672 1 1 E LEU 0.590 1 ATOM 34 C CB . LEU 325 325 ? A 193.426 192.774 212.708 1 1 E LEU 0.590 1 ATOM 35 C CG . LEU 325 325 ? A 193.236 191.399 212.045 1 1 E LEU 0.590 1 ATOM 36 C CD1 . LEU 325 325 ? A 194.150 191.281 210.814 1 1 E LEU 0.590 1 ATOM 37 C CD2 . LEU 325 325 ? A 193.467 190.239 213.026 1 1 E LEU 0.590 1 ATOM 38 N N . VAL 326 326 ? A 192.733 195.522 214.081 1 1 E VAL 0.600 1 ATOM 39 C CA . VAL 326 326 ? A 193.051 196.767 214.779 1 1 E VAL 0.600 1 ATOM 40 C C . VAL 326 326 ? A 192.259 196.886 216.069 1 1 E VAL 0.600 1 ATOM 41 O O . VAL 326 326 ? A 192.811 197.183 217.126 1 1 E VAL 0.600 1 ATOM 42 C CB . VAL 326 326 ? A 192.825 198.009 213.910 1 1 E VAL 0.600 1 ATOM 43 C CG1 . VAL 326 326 ? A 193.105 199.313 214.695 1 1 E VAL 0.600 1 ATOM 44 C CG2 . VAL 326 326 ? A 193.769 197.956 212.693 1 1 E VAL 0.600 1 ATOM 45 N N . PHE 327 327 ? A 190.945 196.591 216.059 1 1 E PHE 0.580 1 ATOM 46 C CA . PHE 327 327 ? A 190.156 196.582 217.279 1 1 E PHE 0.580 1 ATOM 47 C C . PHE 327 327 ? A 190.647 195.577 218.311 1 1 E PHE 0.580 1 ATOM 48 O O . PHE 327 327 ? A 190.826 195.925 219.475 1 1 E PHE 0.580 1 ATOM 49 C CB . PHE 327 327 ? A 188.651 196.374 216.964 1 1 E PHE 0.580 1 ATOM 50 C CG . PHE 327 327 ? A 188.004 197.554 216.266 1 1 E PHE 0.580 1 ATOM 51 C CD1 . PHE 327 327 ? A 188.575 198.842 216.164 1 1 E PHE 0.580 1 ATOM 52 C CD2 . PHE 327 327 ? A 186.730 197.355 215.713 1 1 E PHE 0.580 1 ATOM 53 C CE1 . PHE 327 327 ? A 187.890 199.886 215.528 1 1 E PHE 0.580 1 ATOM 54 C CE2 . PHE 327 327 ? A 186.041 198.396 215.080 1 1 E PHE 0.580 1 ATOM 55 C CZ . PHE 327 327 ? A 186.622 199.664 214.987 1 1 E PHE 0.580 1 ATOM 56 N N . LEU 328 328 ? A 190.967 194.332 217.920 1 1 E LEU 0.590 1 ATOM 57 C CA . LEU 328 328 ? A 191.528 193.344 218.826 1 1 E LEU 0.590 1 ATOM 58 C C . LEU 328 328 ? A 192.868 193.725 219.455 1 1 E LEU 0.590 1 ATOM 59 O O . LEU 328 328 ? A 193.074 193.552 220.656 1 1 E LEU 0.590 1 ATOM 60 C CB . LEU 328 328 ? A 191.709 192.003 218.086 1 1 E LEU 0.590 1 ATOM 61 C CG . LEU 328 328 ? A 190.391 191.315 217.683 1 1 E LEU 0.590 1 ATOM 62 C CD1 . LEU 328 328 ? A 190.698 190.122 216.765 1 1 E LEU 0.590 1 ATOM 63 C CD2 . LEU 328 328 ? A 189.558 190.885 218.903 1 1 E LEU 0.590 1 ATOM 64 N N . SER 329 329 ? A 193.814 194.273 218.661 1 1 E SER 0.590 1 ATOM 65 C CA . SER 329 329 ? A 195.105 194.737 219.161 1 1 E SER 0.590 1 ATOM 66 C C . SER 329 329 ? A 195.007 195.939 220.096 1 1 E SER 0.590 1 ATOM 67 O O . SER 329 329 ? A 195.665 195.976 221.136 1 1 E SER 0.590 1 ATOM 68 C CB . SER 329 329 ? A 196.144 195.007 218.035 1 1 E SER 0.590 1 ATOM 69 O OG . SER 329 329 ? A 195.760 196.079 217.173 1 1 E SER 0.590 1 ATOM 70 N N . VAL 330 330 ? A 194.139 196.930 219.776 1 1 E VAL 0.590 1 ATOM 71 C CA . VAL 330 330 ? A 193.816 198.069 220.637 1 1 E VAL 0.590 1 ATOM 72 C C . VAL 330 330 ? A 193.190 197.631 221.950 1 1 E VAL 0.590 1 ATOM 73 O O . VAL 330 330 ? A 193.589 198.101 223.015 1 1 E VAL 0.590 1 ATOM 74 C CB . VAL 330 330 ? A 192.909 199.095 219.951 1 1 E VAL 0.590 1 ATOM 75 C CG1 . VAL 330 330 ? A 192.469 200.224 220.915 1 1 E VAL 0.590 1 ATOM 76 C CG2 . VAL 330 330 ? A 193.692 199.727 218.785 1 1 E VAL 0.590 1 ATOM 77 N N . ILE 331 331 ? A 192.232 196.668 221.920 1 1 E ILE 0.590 1 ATOM 78 C CA . ILE 331 331 ? A 191.632 196.086 223.123 1 1 E ILE 0.590 1 ATOM 79 C C . ILE 331 331 ? A 192.704 195.459 223.994 1 1 E ILE 0.590 1 ATOM 80 O O . ILE 331 331 ? A 192.793 195.756 225.180 1 1 E ILE 0.590 1 ATOM 81 C CB . ILE 331 331 ? A 190.529 195.063 222.803 1 1 E ILE 0.590 1 ATOM 82 C CG1 . ILE 331 331 ? A 189.304 195.784 222.194 1 1 E ILE 0.590 1 ATOM 83 C CG2 . ILE 331 331 ? A 190.088 194.256 224.053 1 1 E ILE 0.590 1 ATOM 84 C CD1 . ILE 331 331 ? A 188.325 194.835 221.488 1 1 E ILE 0.590 1 ATOM 85 N N . LEU 332 332 ? A 193.616 194.650 223.409 1 1 E LEU 0.570 1 ATOM 86 C CA . LEU 332 332 ? A 194.702 194.043 224.161 1 1 E LEU 0.570 1 ATOM 87 C C . LEU 332 332 ? A 195.648 195.050 224.804 1 1 E LEU 0.570 1 ATOM 88 O O . LEU 332 332 ? A 196.020 194.917 225.974 1 1 E LEU 0.570 1 ATOM 89 C CB . LEU 332 332 ? A 195.515 193.048 223.300 1 1 E LEU 0.570 1 ATOM 90 C CG . LEU 332 332 ? A 196.493 192.166 224.111 1 1 E LEU 0.570 1 ATOM 91 C CD1 . LEU 332 332 ? A 195.779 191.328 225.189 1 1 E LEU 0.570 1 ATOM 92 C CD2 . LEU 332 332 ? A 197.297 191.255 223.172 1 1 E LEU 0.570 1 ATOM 93 N N . GLY 333 333 ? A 196.014 196.126 224.077 1 1 E GLY 0.570 1 ATOM 94 C CA . GLY 333 333 ? A 196.826 197.209 224.622 1 1 E GLY 0.570 1 ATOM 95 C C . GLY 333 333 ? A 196.156 197.978 225.736 1 1 E GLY 0.570 1 ATOM 96 O O . GLY 333 333 ? A 196.784 198.322 226.734 1 1 E GLY 0.570 1 ATOM 97 N N . GLY 334 334 ? A 194.835 198.221 225.629 1 1 E GLY 0.570 1 ATOM 98 C CA . GLY 334 334 ? A 194.049 198.845 226.690 1 1 E GLY 0.570 1 ATOM 99 C C . GLY 334 334 ? A 193.885 197.991 227.931 1 1 E GLY 0.570 1 ATOM 100 O O . GLY 334 334 ? A 193.907 198.499 229.047 1 1 E GLY 0.570 1 ATOM 101 N N . LEU 335 335 ? A 193.754 196.656 227.765 1 1 E LEU 0.570 1 ATOM 102 C CA . LEU 335 335 ? A 193.757 195.687 228.855 1 1 E LEU 0.570 1 ATOM 103 C C . LEU 335 335 ? A 195.074 195.643 229.612 1 1 E LEU 0.570 1 ATOM 104 O O . LEU 335 335 ? A 195.090 195.698 230.837 1 1 E LEU 0.570 1 ATOM 105 C CB . LEU 335 335 ? A 193.440 194.256 228.350 1 1 E LEU 0.570 1 ATOM 106 C CG . LEU 335 335 ? A 191.992 194.051 227.867 1 1 E LEU 0.570 1 ATOM 107 C CD1 . LEU 335 335 ? A 191.869 192.681 227.178 1 1 E LEU 0.570 1 ATOM 108 C CD2 . LEU 335 335 ? A 190.964 194.207 229.002 1 1 E LEU 0.570 1 ATOM 109 N N . ILE 336 336 ? A 196.223 195.604 228.900 1 1 E ILE 0.560 1 ATOM 110 C CA . ILE 336 336 ? A 197.550 195.655 229.511 1 1 E ILE 0.560 1 ATOM 111 C C . ILE 336 336 ? A 197.770 196.962 230.267 1 1 E ILE 0.560 1 ATOM 112 O O . ILE 336 336 ? A 198.265 196.964 231.392 1 1 E ILE 0.560 1 ATOM 113 C CB . ILE 336 336 ? A 198.662 195.403 228.492 1 1 E ILE 0.560 1 ATOM 114 C CG1 . ILE 336 336 ? A 198.568 193.943 227.979 1 1 E ILE 0.560 1 ATOM 115 C CG2 . ILE 336 336 ? A 200.060 195.681 229.107 1 1 E ILE 0.560 1 ATOM 116 C CD1 . ILE 336 336 ? A 199.458 193.663 226.762 1 1 E ILE 0.560 1 ATOM 117 N N . SER 337 337 ? A 197.347 198.109 229.693 1 1 E SER 0.540 1 ATOM 118 C CA . SER 337 337 ? A 197.388 199.413 230.358 1 1 E SER 0.540 1 ATOM 119 C C . SER 337 337 ? A 196.574 199.499 231.638 1 1 E SER 0.540 1 ATOM 120 O O . SER 337 337 ? A 196.999 200.109 232.613 1 1 E SER 0.540 1 ATOM 121 C CB . SER 337 337 ? A 196.875 200.565 229.463 1 1 E SER 0.540 1 ATOM 122 O OG . SER 337 337 ? A 197.774 200.810 228.382 1 1 E SER 0.540 1 ATOM 123 N N . CYS 338 338 ? A 195.366 198.896 231.655 1 1 E CYS 0.580 1 ATOM 124 C CA . CYS 338 338 ? A 194.565 198.703 232.856 1 1 E CYS 0.580 1 ATOM 125 C C . CYS 338 338 ? A 195.197 197.778 233.893 1 1 E CYS 0.580 1 ATOM 126 O O . CYS 338 338 ? A 195.133 198.074 235.080 1 1 E CYS 0.580 1 ATOM 127 C CB . CYS 338 338 ? A 193.132 198.212 232.518 1 1 E CYS 0.580 1 ATOM 128 S SG . CYS 338 338 ? A 192.060 199.549 231.895 1 1 E CYS 0.580 1 ATOM 129 N N . CYS 339 339 ? A 195.830 196.660 233.479 1 1 E CYS 0.500 1 ATOM 130 C CA . CYS 339 339 ? A 196.514 195.718 234.364 1 1 E CYS 0.500 1 ATOM 131 C C . CYS 339 339 ? A 197.873 196.182 234.911 1 1 E CYS 0.500 1 ATOM 132 O O . CYS 339 339 ? A 198.428 195.558 235.800 1 1 E CYS 0.500 1 ATOM 133 C CB . CYS 339 339 ? A 196.817 194.385 233.619 1 1 E CYS 0.500 1 ATOM 134 S SG . CYS 339 339 ? A 195.354 193.400 233.164 1 1 E CYS 0.500 1 ATOM 135 N N . ALA 340 340 ? A 198.474 197.240 234.324 1 1 E ALA 0.400 1 ATOM 136 C CA . ALA 340 340 ? A 199.666 197.904 234.824 1 1 E ALA 0.400 1 ATOM 137 C C . ALA 340 340 ? A 199.488 198.677 236.138 1 1 E ALA 0.400 1 ATOM 138 O O . ALA 340 340 ? A 200.429 198.806 236.914 1 1 E ALA 0.400 1 ATOM 139 C CB . ALA 340 340 ? A 200.202 198.878 233.749 1 1 E ALA 0.400 1 ATOM 140 N N . ARG 341 341 ? A 198.289 199.264 236.337 1 1 E ARG 0.270 1 ATOM 141 C CA . ARG 341 341 ? A 197.897 199.990 237.535 1 1 E ARG 0.270 1 ATOM 142 C C . ARG 341 341 ? A 197.272 199.093 238.637 1 1 E ARG 0.270 1 ATOM 143 O O . ARG 341 341 ? A 197.054 197.878 238.405 1 1 E ARG 0.270 1 ATOM 144 C CB . ARG 341 341 ? A 196.812 201.037 237.187 1 1 E ARG 0.270 1 ATOM 145 C CG . ARG 341 341 ? A 197.300 202.213 236.329 1 1 E ARG 0.270 1 ATOM 146 C CD . ARG 341 341 ? A 196.150 203.168 236.028 1 1 E ARG 0.270 1 ATOM 147 N NE . ARG 341 341 ? A 196.702 204.306 235.216 1 1 E ARG 0.270 1 ATOM 148 C CZ . ARG 341 341 ? A 195.940 205.274 234.690 1 1 E ARG 0.270 1 ATOM 149 N NH1 . ARG 341 341 ? A 194.623 205.274 234.873 1 1 E ARG 0.270 1 ATOM 150 N NH2 . ARG 341 341 ? A 196.488 206.252 233.971 1 1 E ARG 0.270 1 ATOM 151 O OXT . ARG 341 341 ? A 196.971 199.660 239.727 1 1 E ARG 0.270 1 # # loop_ _atom_type.symbol C N O S # # loop_ _ma_qa_metric.id _ma_qa_metric.name _ma_qa_metric.description _ma_qa_metric.type _ma_qa_metric.mode _ma_qa_metric.type_other_details _ma_qa_metric.software_group_id 1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' local . 5 2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].' 'pLDDT all-atom in [0,1]' global . 5 3 GMQE 'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.' 'normalized score' global . 6 # # loop_ _ma_qa_metric_global.ordinal_id _ma_qa_metric_global.model_id _ma_qa_metric_global.metric_id _ma_qa_metric_global.metric_value 1 1 2 0.536 2 1 3 0.001 # # loop_ _ma_qa_metric_local.ordinal_id _ma_qa_metric_local.model_id _ma_qa_metric_local.label_asym_id _ma_qa_metric_local.label_seq_id _ma_qa_metric_local.label_comp_id _ma_qa_metric_local.metric_id _ma_qa_metric_local.metric_value 1 1 A 320 GLY 1 0.340 2 1 A 321 THR 1 0.440 3 1 A 322 VAL 1 0.580 4 1 A 323 ALA 1 0.600 5 1 A 324 SER 1 0.570 6 1 A 325 LEU 1 0.590 7 1 A 326 VAL 1 0.600 8 1 A 327 PHE 1 0.580 9 1 A 328 LEU 1 0.590 10 1 A 329 SER 1 0.590 11 1 A 330 VAL 1 0.590 12 1 A 331 ILE 1 0.590 13 1 A 332 LEU 1 0.570 14 1 A 333 GLY 1 0.570 15 1 A 334 GLY 1 0.570 16 1 A 335 LEU 1 0.570 17 1 A 336 ILE 1 0.560 18 1 A 337 SER 1 0.540 19 1 A 338 CYS 1 0.580 20 1 A 339 CYS 1 0.500 21 1 A 340 ALA 1 0.400 22 1 A 341 ARG 1 0.270 # # loop_ _pdbx_data_usage.id _pdbx_data_usage.type _pdbx_data_usage.details _pdbx_data_usage.url 1 license ;This SWISS-MODEL protein model is copyright. 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