data_SMR-e6d63631cc40058f365909a333014966_3
_entry.id SMR-e6d63631cc40058f365909a333014966_3
_struct.entry_id SMR-e6d63631cc40058f365909a333014966_3
_struct.pdbx_model_details
;This model was generated unsupervised by the SWISS-MODEL homology-modelling pipeline for the SWISS-MODEL Repository, a database of annotated 3D protein structure models. The modelled monomer covers following UniProtKB entries:

  - A0A2I2ZC58/ A0A2I2ZC58_GORGO, Ring finger protein 4
  - A0A2J8K6K8/ A0A2J8K6K8_PANTR, Ring finger protein 4
  - A0A6D2XIG8/ A0A6D2XIG8_PANTR, RNF4 isoform 6
  - P78317/ RNF4_HUMAN, E3 ubiquitin-protein ligase RNF4

Estimated model accuracy of this model is 0.0, calculated by SWISS-MODEL as Global Model Quality Estimate (GMQE).
;
_struct.pdbx_structure_determination_methodology computational
_struct.title 'Model for UniProtKB entries A0A2I2ZC58, A0A2J8K6K8, A0A6D2XIG8, P78317'
_audit_conform.dict_location https://raw.githubusercontent.com/ihmwg/ModelCIF/d18ba38/base/mmcif_ma-core.dic
_audit_conform.dict_name mmcif_ma.dic
_audit_conform.dict_version 1.4.6
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The SWISS-MODEL Repository - new features and functionality'
'Nucleic Acids Res.' 45 D313 D319 2017 27899672 10.1093/nar/gkw1132
2 'SWISS-MODEL: homology modelling of protein structures and complexes'
'Nucleic Acids Res.' 46 W296 W303 2018 29788355 10.1093/nar/gky427
3 'ProMod3 - A versatile homology modelling toolbox' 'PLoS Comput. Biol.' 17(1)
1 18 2021 33507980 10.1371/journal.pcbi.1008667
4 'QMEANDisCo - distance constraints applied on model quality estimation'
Bioinformatics 36 1765 1771 2020 31697312 10.1093/bioinformatics/btz828
5
'OpenStructure: an integrated software framework for computational structural biology'
'Acta Crystallogr., Sect. D: Biol. Crystallogr.' 69 701 709 2013 23633579
10.1107/S0907444913007051
6 'BLAST+: architecture and applications' 'BMC Bioinf.' 10 421 . 2009 20003500
10.1186/1471-2105-10-421
7 'HH-suite3 for fast remote homology detection and deep protein annotation'
'BMC Bioinf.' 20 473 . 2019 31521110 10.1186/s12859-019-3019-7
#
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
primary 'Bienert, S.' 1
primary 'Waterhouse, A.' 2
primary 'de Beer, T.A.P.' 3
primary 'Tauriello, G.' 4
primary 'Studer, G.' 5
primary 'Bordoli, L.' 6
primary 'Schwede, T.' 7
2 'Waterhouse, A.' 8
2 'Bertoni, M.' 9
2 'Bienert, S.' 10
2 'Studer, G.' 11
2 'Tauriello, G.' 12
2 'Gumienny, R.' 13
2 'Heer, F.T.' 14
2 'de Beer, T.A.P.' 15
2 'Rempfer, C.' 16
2 'Bordoli, L.' 17
2 'Lepore, R.' 18
2 'Schwede, T.' 19
3 'Studer, G.' 20
3 'Tauriello, G.' 21
3 'Bienert, S.' 22
3 'Biasini, M.' 23
3 'Johner, N.' 24
3 'Schwede, T.' 25
4 'Studer, G.' 26
4 'Rempfer, C.' 27
4 'Waterhouse, A.M.' 28
4 'Gumienny, R.' 29
4 'Haas, J.' 30
4 'Schwede, T.' 31
5 'Biasini, M.' 32
5 'Schmidt, T.' 33
5 'Bienert, S.' 34
5 'Mariani, V.' 35
5 'Studer, G.' 36
5 'Haas, J.' 37
5 'Johner, N.' 38
5 'Schenk, A.D.' 39
5 'Philippsen, A.' 40
5 'Schwede, T.' 41
6 'Camacho, C.' 42
6 'Coulouris, G.' 43
6 'Avagyan, V.' 44
6 'Ma, N.' 45
6 'Papadopoulos, J.' 46
6 'Bealer, K.' 47
6 'Madden, T.L.' 48
7 'Steinegger, M.' 49
7 'Meier, M.' 50
7 'Mirdita, M.' 51
7 'Vohringer, H.' 52
7 'Haunsberger, S.J.' 53
7 'Soding, J.' 54
#
#
loop_
_software.pdbx_ordinal
_software.name
_software.classification
_software.description
_software.version
_software.type
_software.location
_software.citation_id
1 SWISS-MODEL 'model building' 'Homology modelling web service' 2024-10.3
package https://swissmodel.expasy.org 2
2 ProMod3 'model building' 'Modular homology modelling engine' 3.4.1 library
https://git.scicore.unibas.ch/schwede/ProMod3 3
3 QMEAN 'model building' 'QMEAN - Qualitative Model Energy ANalysis' 4.3.1
library https://git.scicore.unibas.ch/schwede/QMEAN 4
4 OpenStructure 'data processing'
'Open-Source Computational Structural Biology Framework' 2.8.0 package
https://openstructure.org/ 5
5 BLAST 'data collection' . 2.2.31 package https://blast.ncbi.nlm.nih.gov 6
6 HH-suite 'data collection' 'HH-suite3 for sensitive sequence searching' 3.2.0
package https://github.com/soedinglab/hh-suite 7
#
#
loop_
_ma_software_group.ordinal_id
_ma_software_group.group_id
_ma_software_group.software_id
_ma_software_group.parameter_group_id
1 1 6 .
2 2 1 .
3 2 4 .
4 2 5 .
5 2 6 .
6 3 1 .
7 3 4 .
8 4 1 .
9 4 2 .
10 4 4 .
11 5 3 .
12 6 1 .
13 6 3 .
14 6 4 .
#
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bienert, S.' 1
'Waterhouse, A.' 2
'de Beer, T.A.P.' 3
'Tauriello, G.' 4
'Studer, G.' 5
'Bordoli, L.' 6
'Schwede, T.' 7
#
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.name
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.ma_provenance
ALA 'L-peptide linking' ALANINE 'C3 H7 N O2' 89.094 'CCD Core'
ARG 'L-peptide linking' ARGININE 'C6 H15 N4 O2 1' 175.212 'CCD Core'
ASN 'L-peptide linking' ASPARAGINE 'C4 H8 N2 O3' 132.119 'CCD Core'
ASP 'L-peptide linking' 'ASPARTIC ACID' 'C4 H7 N O4' 133.103 'CCD Core'
CYS 'L-peptide linking' CYSTEINE 'C3 H7 N O2 S' 121.154 'CCD Core'
GLN 'L-peptide linking' GLUTAMINE 'C5 H10 N2 O3' 146.146 'CCD Core'
GLU 'L-peptide linking' 'GLUTAMIC ACID' 'C5 H9 N O4' 147.130 'CCD Core'
GLY 'peptide linking' GLYCINE 'C2 H5 N O2' 75.067 'CCD Core'
HIS 'L-peptide linking' HISTIDINE 'C6 H10 N3 O2 1' 156.165 'CCD Core'
ILE 'L-peptide linking' ISOLEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LEU 'L-peptide linking' LEUCINE 'C6 H13 N O2' 131.175 'CCD Core'
LYS 'L-peptide linking' LYSINE 'C6 H15 N2 O2 1' 147.198 'CCD Core'
MET 'L-peptide linking' METHIONINE 'C5 H11 N O2 S' 149.208 'CCD Core'
PHE 'L-peptide linking' PHENYLALANINE 'C9 H11 N O2' 165.192 'CCD Core'
PRO 'L-peptide linking' PROLINE 'C5 H9 N O2' 115.132 'CCD Core'
SER 'L-peptide linking' SERINE 'C3 H7 N O3' 105.093 'CCD Core'
THR 'L-peptide linking' THREONINE 'C4 H9 N O3' 119.120 'CCD Core'
TYR 'L-peptide linking' TYROSINE 'C9 H11 N O3' 181.191 'CCD Core'
VAL 'L-peptide linking' VALINE 'C5 H11 N O2' 117.148 'CCD Core'
#
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.details
1 polymer man . 24758.043 1 .
#
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.details
1 1 UNP RNF4_HUMAN P78317 1
;MSTRKRRGGAINSRQAQKRTREATSTPEISLEAEPIELVETAGDEIVDLTCESLEPVVVDLTHNDSVVIV
DERRRPRRNARRLPQDHADSCVVSSDDEELSRDRDVYVTTHTPRNARDEGATGLRPSGTVSCPICMDGYS
EIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI
;
'E3 ubiquitin-protein ligase RNF4'
2 1 UNP A0A6D2XIG8_PANTR A0A6D2XIG8 1
;MSTRKRRGGAINSRQAQKRTREATSTPEISLEAEPIELVETAGDEIVDLTCESLEPVVVDLTHNDSVVIV
DERRRPRRNARRLPQDHADSCVVSSDDEELSRDRDVYVTTHTPRNARDEGATGLRPSGTVSCPICMDGYS
EIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI
;
'RNF4 isoform 6'
3 1 UNP A0A2J8K6K8_PANTR A0A2J8K6K8 1
;MSTRKRRGGAINSRQAQKRTREATSTPEISLEAEPIELVETAGDEIVDLTCESLEPVVVDLTHNDSVVIV
DERRRPRRNARRLPQDHADSCVVSSDDEELSRDRDVYVTTHTPRNARDEGATGLRPSGTVSCPICMDGYS
EIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI
;
'Ring finger protein 4'
4 1 UNP A0A2I2ZC58_GORGO A0A2I2ZC58 1
;MSTRKRRGGAINSRQAQKRTREATSTPEISLEAEPIELVETAGDEIVDLTCESLEPVVVDLTHNDSVVIV
DERRRPRRNARRLPQDHADSCVVSSDDEELSRDRDVYVTTHTPRNARDEGATGLRPSGTVSCPICMDGYS
EIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI
;
'Ring finger protein 4'
#
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
1 1 1 190 1 190
2 2 1 190 1 190
3 3 1 190 1 190
4 4 1 190 1 190
#
#
loop_
_ma_target_ref_db_details.target_entity_id
_ma_target_ref_db_details.db_name
_ma_target_ref_db_details.db_name_other_details
_ma_target_ref_db_details.db_code
_ma_target_ref_db_details.db_accession
_ma_target_ref_db_details.seq_db_isoform
_ma_target_ref_db_details.seq_db_align_begin
_ma_target_ref_db_details.seq_db_align_end
_ma_target_ref_db_details.ncbi_taxonomy_id
_ma_target_ref_db_details.organism_scientific
_ma_target_ref_db_details.seq_db_sequence_version_date
_ma_target_ref_db_details.seq_db_sequence_checksum
1 UNP . RNF4_HUMAN P78317 . 1 190 9606 'Homo sapiens (Human)' 1997-05-01
E5E3AE4A9B28CF9D
1 UNP . A0A6D2XIG8_PANTR A0A6D2XIG8 . 1 190 9598 'Pan troglodytes (Chimpanzee)'
2020-06-17 E5E3AE4A9B28CF9D
1 UNP . A0A2J8K6K8_PANTR A0A2J8K6K8 . 1 190 9598 'Pan troglodytes (Chimpanzee)'
2018-04-25 E5E3AE4A9B28CF9D
1 UNP . A0A2I2ZC58_GORGO A0A2I2ZC58 . 1 190 9595
'Gorilla gorilla gorilla (Western lowland gorilla)' 2018-02-28 E5E3AE4A9B28CF9D
#
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
1 polypeptide(L) no no C
;MSTRKRRGGAINSRQAQKRTREATSTPEISLEAEPIELVETAGDEIVDLTCESLEPVVVDLTHNDSVVIV
DERRRPRRNARRLPQDHADSCVVSSDDEELSRDRDVYVTTHTPRNARDEGATGLRPSGTVSCPICMDGYS
EIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI
;

;MSTRKRRGGAINSRQAQKRTREATSTPEISLEAEPIELVETAGDEIVDLTCESLEPVVVDLTHNDSVVIV
DERRRPRRNARRLPQDHADSCVVSSDDEELSRDRDVYVTTHTPRNARDEGATGLRPSGTVSCPICMDGYS
EIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI
;

#
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET .
1 2 SER .
1 3 THR .
1 4 ARG .
1 5 LYS .
1 6 ARG .
1 7 ARG .
1 8 GLY .
1 9 GLY .
1 10 ALA .
1 11 ILE .
1 12 ASN .
1 13 SER .
1 14 ARG .
1 15 GLN .
1 16 ALA .
1 17 GLN .
1 18 LYS .
1 19 ARG .
1 20 THR .
1 21 ARG .
1 22 GLU .
1 23 ALA .
1 24 THR .
1 25 SER .
1 26 THR .
1 27 PRO .
1 28 GLU .
1 29 ILE .
1 30 SER .
1 31 LEU .
1 32 GLU .
1 33 ALA .
1 34 GLU .
1 35 PRO .
1 36 ILE .
1 37 GLU .
1 38 LEU .
1 39 VAL .
1 40 GLU .
1 41 THR .
1 42 ALA .
1 43 GLY .
1 44 ASP .
1 45 GLU .
1 46 ILE .
1 47 VAL .
1 48 ASP .
1 49 LEU .
1 50 THR .
1 51 CYS .
1 52 GLU .
1 53 SER .
1 54 LEU .
1 55 GLU .
1 56 PRO .
1 57 VAL .
1 58 VAL .
1 59 VAL .
1 60 ASP .
1 61 LEU .
1 62 THR .
1 63 HIS .
1 64 ASN .
1 65 ASP .
1 66 SER .
1 67 VAL .
1 68 VAL .
1 69 ILE .
1 70 VAL .
1 71 ASP .
1 72 GLU .
1 73 ARG .
1 74 ARG .
1 75 ARG .
1 76 PRO .
1 77 ARG .
1 78 ARG .
1 79 ASN .
1 80 ALA .
1 81 ARG .
1 82 ARG .
1 83 LEU .
1 84 PRO .
1 85 GLN .
1 86 ASP .
1 87 HIS .
1 88 ALA .
1 89 ASP .
1 90 SER .
1 91 CYS .
1 92 VAL .
1 93 VAL .
1 94 SER .
1 95 SER .
1 96 ASP .
1 97 ASP .
1 98 GLU .
1 99 GLU .
1 100 LEU .
1 101 SER .
1 102 ARG .
1 103 ASP .
1 104 ARG .
1 105 ASP .
1 106 VAL .
1 107 TYR .
1 108 VAL .
1 109 THR .
1 110 THR .
1 111 HIS .
1 112 THR .
1 113 PRO .
1 114 ARG .
1 115 ASN .
1 116 ALA .
1 117 ARG .
1 118 ASP .
1 119 GLU .
1 120 GLY .
1 121 ALA .
1 122 THR .
1 123 GLY .
1 124 LEU .
1 125 ARG .
1 126 PRO .
1 127 SER .
1 128 GLY .
1 129 THR .
1 130 VAL .
1 131 SER .
1 132 CYS .
1 133 PRO .
1 134 ILE .
1 135 CYS .
1 136 MET .
1 137 ASP .
1 138 GLY .
1 139 TYR .
1 140 SER .
1 141 GLU .
1 142 ILE .
1 143 VAL .
1 144 GLN .
1 145 ASN .
1 146 GLY .
1 147 ARG .
1 148 LEU .
1 149 ILE .
1 150 VAL .
1 151 SER .
1 152 THR .
1 153 GLU .
1 154 CYS .
1 155 GLY .
1 156 HIS .
1 157 VAL .
1 158 PHE .
1 159 CYS .
1 160 SER .
1 161 GLN .
1 162 CYS .
1 163 LEU .
1 164 ARG .
1 165 ASP .
1 166 SER .
1 167 LEU .
1 168 LYS .
1 169 ASN .
1 170 ALA .
1 171 ASN .
1 172 THR .
1 173 CYS .
1 174 PRO .
1 175 THR .
1 176 CYS .
1 177 ARG .
1 178 LYS .
1 179 LYS .
1 180 ILE .
1 181 ASN .
1 182 HIS .
1 183 LYS .
1 184 ARG .
1 185 TYR .
1 186 HIS .
1 187 PRO .
1 188 ILE .
1 189 TYR .
1 190 ILE .
#
#
loop_
_struct_asym.id
_struct_asym.entity_id
_struct_asym.details
A 1 .
#
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 MET 1 ? ? ? C .
A 1 2 SER 2 ? ? ? C .
A 1 3 THR 3 ? ? ? C .
A 1 4 ARG 4 ? ? ? C .
A 1 5 LYS 5 ? ? ? C .
A 1 6 ARG 6 ? ? ? C .
A 1 7 ARG 7 ? ? ? C .
A 1 8 GLY 8 ? ? ? C .
A 1 9 GLY 9 ? ? ? C .
A 1 10 ALA 10 ? ? ? C .
A 1 11 ILE 11 ? ? ? C .
A 1 12 ASN 12 ? ? ? C .
A 1 13 SER 13 ? ? ? C .
A 1 14 ARG 14 ? ? ? C .
A 1 15 GLN 15 ? ? ? C .
A 1 16 ALA 16 ? ? ? C .
A 1 17 GLN 17 ? ? ? C .
A 1 18 LYS 18 ? ? ? C .
A 1 19 ARG 19 ? ? ? C .
A 1 20 THR 20 ? ? ? C .
A 1 21 ARG 21 ? ? ? C .
A 1 22 GLU 22 ? ? ? C .
A 1 23 ALA 23 ? ? ? C .
A 1 24 THR 24 ? ? ? C .
A 1 25 SER 25 ? ? ? C .
A 1 26 THR 26 ? ? ? C .
A 1 27 PRO 27 ? ? ? C .
A 1 28 GLU 28 ? ? ? C .
A 1 29 ILE 29 ? ? ? C .
A 1 30 SER 30 ? ? ? C .
A 1 31 LEU 31 ? ? ? C .
A 1 32 GLU 32 ? ? ? C .
A 1 33 ALA 33 ? ? ? C .
A 1 34 GLU 34 ? ? ? C .
A 1 35 PRO 35 ? ? ? C .
A 1 36 ILE 36 ? ? ? C .
A 1 37 GLU 37 ? ? ? C .
A 1 38 LEU 38 ? ? ? C .
A 1 39 VAL 39 ? ? ? C .
A 1 40 GLU 40 ? ? ? C .
A 1 41 THR 41 41 THR THR C .
A 1 42 ALA 42 42 ALA ALA C .
A 1 43 GLY 43 43 GLY GLY C .
A 1 44 ASP 44 44 ASP ASP C .
A 1 45 GLU 45 45 GLU GLU C .
A 1 46 ILE 46 46 ILE ILE C .
A 1 47 VAL 47 47 VAL VAL C .
A 1 48 ASP 48 48 ASP ASP C .
A 1 49 LEU 49 49 LEU LEU C .
A 1 50 THR 50 50 THR THR C .
A 1 51 CYS 51 51 CYS CYS C .
A 1 52 GLU 52 52 GLU GLU C .
A 1 53 SER 53 53 SER SER C .
A 1 54 LEU 54 54 LEU LEU C .
A 1 55 GLU 55 55 GLU GLU C .
A 1 56 PRO 56 56 PRO PRO C .
A 1 57 VAL 57 57 VAL VAL C .
A 1 58 VAL 58 58 VAL VAL C .
A 1 59 VAL 59 59 VAL VAL C .
A 1 60 ASP 60 60 ASP ASP C .
A 1 61 LEU 61 61 LEU LEU C .
A 1 62 THR 62 62 THR THR C .
A 1 63 HIS 63 63 HIS HIS C .
A 1 64 ASN 64 64 ASN ASN C .
A 1 65 ASP 65 65 ASP ASP C .
A 1 66 SER 66 ? ? ? C .
A 1 67 VAL 67 ? ? ? C .
A 1 68 VAL 68 ? ? ? C .
A 1 69 ILE 69 ? ? ? C .
A 1 70 VAL 70 ? ? ? C .
A 1 71 ASP 71 ? ? ? C .
A 1 72 GLU 72 ? ? ? C .
A 1 73 ARG 73 ? ? ? C .
A 1 74 ARG 74 ? ? ? C .
A 1 75 ARG 75 ? ? ? C .
A 1 76 PRO 76 ? ? ? C .
A 1 77 ARG 77 ? ? ? C .
A 1 78 ARG 78 ? ? ? C .
A 1 79 ASN 79 ? ? ? C .
A 1 80 ALA 80 ? ? ? C .
A 1 81 ARG 81 ? ? ? C .
A 1 82 ARG 82 ? ? ? C .
A 1 83 LEU 83 ? ? ? C .
A 1 84 PRO 84 ? ? ? C .
A 1 85 GLN 85 ? ? ? C .
A 1 86 ASP 86 ? ? ? C .
A 1 87 HIS 87 ? ? ? C .
A 1 88 ALA 88 ? ? ? C .
A 1 89 ASP 89 ? ? ? C .
A 1 90 SER 90 ? ? ? C .
A 1 91 CYS 91 ? ? ? C .
A 1 92 VAL 92 ? ? ? C .
A 1 93 VAL 93 ? ? ? C .
A 1 94 SER 94 ? ? ? C .
A 1 95 SER 95 ? ? ? C .
A 1 96 ASP 96 ? ? ? C .
A 1 97 ASP 97 ? ? ? C .
A 1 98 GLU 98 ? ? ? C .
A 1 99 GLU 99 ? ? ? C .
A 1 100 LEU 100 ? ? ? C .
A 1 101 SER 101 ? ? ? C .
A 1 102 ARG 102 ? ? ? C .
A 1 103 ASP 103 ? ? ? C .
A 1 104 ARG 104 ? ? ? C .
A 1 105 ASP 105 ? ? ? C .
A 1 106 VAL 106 ? ? ? C .
A 1 107 TYR 107 ? ? ? C .
A 1 108 VAL 108 ? ? ? C .
A 1 109 THR 109 ? ? ? C .
A 1 110 THR 110 ? ? ? C .
A 1 111 HIS 111 ? ? ? C .
A 1 112 THR 112 ? ? ? C .
A 1 113 PRO 113 ? ? ? C .
A 1 114 ARG 114 ? ? ? C .
A 1 115 ASN 115 ? ? ? C .
A 1 116 ALA 116 ? ? ? C .
A 1 117 ARG 117 ? ? ? C .
A 1 118 ASP 118 ? ? ? C .
A 1 119 GLU 119 ? ? ? C .
A 1 120 GLY 120 ? ? ? C .
A 1 121 ALA 121 ? ? ? C .
A 1 122 THR 122 ? ? ? C .
A 1 123 GLY 123 ? ? ? C .
A 1 124 LEU 124 ? ? ? C .
A 1 125 ARG 125 ? ? ? C .
A 1 126 PRO 126 ? ? ? C .
A 1 127 SER 127 ? ? ? C .
A 1 128 GLY 128 ? ? ? C .
A 1 129 THR 129 ? ? ? C .
A 1 130 VAL 130 ? ? ? C .
A 1 131 SER 131 ? ? ? C .
A 1 132 CYS 132 ? ? ? C .
A 1 133 PRO 133 ? ? ? C .
A 1 134 ILE 134 ? ? ? C .
A 1 135 CYS 135 ? ? ? C .
A 1 136 MET 136 ? ? ? C .
A 1 137 ASP 137 ? ? ? C .
A 1 138 GLY 138 ? ? ? C .
A 1 139 TYR 139 ? ? ? C .
A 1 140 SER 140 ? ? ? C .
A 1 141 GLU 141 ? ? ? C .
A 1 142 ILE 142 ? ? ? C .
A 1 143 VAL 143 ? ? ? C .
A 1 144 GLN 144 ? ? ? C .
A 1 145 ASN 145 ? ? ? C .
A 1 146 GLY 146 ? ? ? C .
A 1 147 ARG 147 ? ? ? C .
A 1 148 LEU 148 ? ? ? C .
A 1 149 ILE 149 ? ? ? C .
A 1 150 VAL 150 ? ? ? C .
A 1 151 SER 151 ? ? ? C .
A 1 152 THR 152 ? ? ? C .
A 1 153 GLU 153 ? ? ? C .
A 1 154 CYS 154 ? ? ? C .
A 1 155 GLY 155 ? ? ? C .
A 1 156 HIS 156 ? ? ? C .
A 1 157 VAL 157 ? ? ? C .
A 1 158 PHE 158 ? ? ? C .
A 1 159 CYS 159 ? ? ? C .
A 1 160 SER 160 ? ? ? C .
A 1 161 GLN 161 ? ? ? C .
A 1 162 CYS 162 ? ? ? C .
A 1 163 LEU 163 ? ? ? C .
A 1 164 ARG 164 ? ? ? C .
A 1 165 ASP 165 ? ? ? C .
A 1 166 SER 166 ? ? ? C .
A 1 167 LEU 167 ? ? ? C .
A 1 168 LYS 168 ? ? ? C .
A 1 169 ASN 169 ? ? ? C .
A 1 170 ALA 170 ? ? ? C .
A 1 171 ASN 171 ? ? ? C .
A 1 172 THR 172 ? ? ? C .
A 1 173 CYS 173 ? ? ? C .
A 1 174 PRO 174 ? ? ? C .
A 1 175 THR 175 ? ? ? C .
A 1 176 CYS 176 ? ? ? C .
A 1 177 ARG 177 ? ? ? C .
A 1 178 LYS 178 ? ? ? C .
A 1 179 LYS 179 ? ? ? C .
A 1 180 ILE 180 ? ? ? C .
A 1 181 ASN 181 ? ? ? C .
A 1 182 HIS 182 ? ? ? C .
A 1 183 LYS 183 ? ? ? C .
A 1 184 ARG 184 ? ? ? C .
A 1 185 TYR 185 ? ? ? C .
A 1 186 HIS 186 ? ? ? C .
A 1 187 PRO 187 ? ? ? C .
A 1 188 ILE 188 ? ? ? C .
A 1 189 TYR 189 ? ? ? C .
A 1 190 ILE 190 ? ? ? C .
#
#
loop_
_ma_data.id
_ma_data.name
_ma_data.content_type
_ma_data.content_type_other_details
1
'E3 ubiquitin-protein ligase RNF4 {PDB ID=2mp2, label_asym_id=C, auth_asym_id=C, SMTL ID=2mp2.1.C}'
'template structure' .
2 . target .
3 'Target-template alignment by HHblits to 2mp2, label_asym_id=C'
'target-template alignment' .
4 'model 3' 'model coordinates' .
5 SMTL 'reference database' .
6 PDB 'reference database' .
7 'Template search output' other 'Results of the sequence search'
#
#
loop_
_ma_data_group.ordinal_id
_ma_data_group.group_id
_ma_data_group.data_id
1 1 2
2 1 5
3 1 6
4 2 7
5 3 2
6 3 1
7 3 3
8 4 1
9 4 3
10 5 4
#
#
loop_
_ma_data_ref_db.data_id
_ma_data_ref_db.name
_ma_data_ref_db.location_url
_ma_data_ref_db.version
_ma_data_ref_db.release_date
5 SMTL https://swissmodel.expasy.org/templates/ . 2024-12-18
6 PDB https://www.wwpdb.org . 2024-12-13
#
#
loop_
_ma_target_entity.entity_id
_ma_target_entity.data_id
_ma_target_entity.origin
1 2 'reference database'
#
#
loop_
_ma_target_entity_instance.asym_id
_ma_target_entity_instance.entity_id
_ma_target_entity_instance.details
A 1 .
#
#
loop_
_ma_template_trans_matrix.id
_ma_template_trans_matrix.rot_matrix[1][1]
_ma_template_trans_matrix.rot_matrix[2][1]
_ma_template_trans_matrix.rot_matrix[3][1]
_ma_template_trans_matrix.rot_matrix[1][2]
_ma_template_trans_matrix.rot_matrix[2][2]
_ma_template_trans_matrix.rot_matrix[3][2]
_ma_template_trans_matrix.rot_matrix[1][3]
_ma_template_trans_matrix.rot_matrix[2][3]
_ma_template_trans_matrix.rot_matrix[3][3]
_ma_template_trans_matrix.tr_vector[1]
_ma_template_trans_matrix.tr_vector[2]
_ma_template_trans_matrix.tr_vector[3]
1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000
1.000000 0 0 0
#
#
loop_
_ma_template_details.ordinal_id
_ma_template_details.template_id
_ma_template_details.template_origin
_ma_template_details.template_entity_type
_ma_template_details.template_trans_matrix_id
_ma_template_details.template_data_id
_ma_template_details.target_asym_id
_ma_template_details.template_label_asym_id
_ma_template_details.template_label_entity_id
_ma_template_details.template_model_num
_ma_template_details.template_auth_asym_id
1 1 'reference database' polymer 1 1 A C 3 1 C
#
#
loop_
_ma_template_poly.template_id
_ma_template_poly.seq_one_letter_code
_ma_template_poly.seq_one_letter_code_can
1 TVGDEIVDLTCESLEPVVVDLTHND TVGDEIVDLTCESLEPVVVDLTHND
#
#
loop_
_ma_template_poly_segment.id
_ma_template_poly_segment.template_id
_ma_template_poly_segment.residue_number_begin
_ma_template_poly_segment.residue_number_end
1 1 1 25
#
#
loop_
_ma_template_ref_db_details.template_id
_ma_template_ref_db_details.db_name
_ma_template_ref_db_details.db_name_other_details
_ma_template_ref_db_details.db_accession_code
_ma_template_ref_db_details.db_version_date
1 PDB . 2mp2 2024-05-01
#
#
loop_
_ma_target_template_poly_mapping.id
_ma_target_template_poly_mapping.template_segment_id
_ma_target_template_poly_mapping.target_asym_id
_ma_target_template_poly_mapping.target_seq_id_begin
_ma_target_template_poly_mapping.target_seq_id_end
1 1 A 1 190
#
#
loop_
_ma_alignment_info.alignment_id
_ma_alignment_info.data_id
_ma_alignment_info.software_group_id
_ma_alignment_info.alignment_length
_ma_alignment_info.alignment_type
_ma_alignment_info.alignment_mode
1 3 1 190 'target-template pairwise alignment' local
#
#
loop_
_ma_alignment_details.ordinal_id
_ma_alignment_details.alignment_id
_ma_alignment_details.template_segment_id
_ma_alignment_details.target_asym_id
_ma_alignment_details.score_type
_ma_alignment_details.score_type_other_details
_ma_alignment_details.score_value
_ma_alignment_details.percent_sequence_identity
_ma_alignment_details.sequence_identity_denominator
_ma_alignment_details.sequence_identity_denominator_other_details
1 1 1 A 'HHblits e-value' . 1.6e-08 96.000
'Number of aligned residue pairs (not including the gaps)' .
#
#
loop_
_ma_alignment.ordinal_id
_ma_alignment.alignment_id
_ma_alignment.target_template_flag
_ma_alignment.sequence
1 1 1
MSTRKRRGGAINSRQAQKRTREATSTPEISLEAEPIELVETAGDEIVDLTCESLEPVVVDLTHNDSVVIVDERRRPRRNARRLPQDHADSCVVSSDDEELSRDRDVYVTTHTPRNARDEGATGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI
2 1 2
----------------------------------------TVGDEIVDLTCESLEPVVVDLTHND-----------------------------------------------------------------------------------------------------------------------------
#
#
loop_
_ma_protocol_step.ordinal_id
_ma_protocol_step.protocol_id
_ma_protocol_step.step_id
_ma_protocol_step.method_type
_ma_protocol_step.step_name
_ma_protocol_step.details
_ma_protocol_step.software_group_id
_ma_protocol_step.input_data_group_id
_ma_protocol_step.output_data_group_id
1 1 1 'template search' 'template search' 'SWISS-MODEL template search in PDB' 2
1 2
2 1 2 'template selection' 'template selection'
'Automatic template selection by SWISS-MODEL {QSQE=0.000}' 3 2 4
3 1 3 modeling 'homology modeling'
'SWISS-MODEL auto-model mode using ProMod3 on 2mp2.1' 4 3 5
#
#
loop_
_ma_model_list.ordinal_id
_ma_model_list.model_id
_ma_model_list.model_group_id
_ma_model_list.model_name
_ma_model_list.model_group_name
_ma_model_list.data_id
_ma_model_list.model_type
_ma_model_list.model_type_other_details
1 1 1 'model 3' . 4 'Homology model' .
#
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.auth_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.label_entity_id
_atom_site.auth_asym_id
_atom_site.auth_comp_id
_atom_site.B_iso_or_equiv
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . THR 41 41 ? A 323.616 9.380 11.500 1 1 C THR 0.380 1
ATOM 2 C CA . THR 41 41 ? A 322.695 9.974 10.456 1 1 C THR 0.380 1
ATOM 3 C C . THR 41 41 ? A 321.731 10.939 11.115 1 1 C THR 0.380 1
ATOM 4 O O . THR 41 41 ? A 321.957 12.140 11.019 1 1 C THR 0.380 1
ATOM 5 C CB . THR 41 41 ? A 321.982 8.903 9.612 1 1 C THR 0.380 1
ATOM 6 O OG1 . THR 41 41 ? A 321.171 8.035 10.391 1 1 C THR 0.380 1
ATOM 7 C CG2 . THR 41 41 ? A 323.018 8.003 8.917 1 1 C THR 0.380 1
ATOM 8 N N . ALA 42 42 ? A 320.707 10.443 11.845 1 1 C ALA 0.300 1
ATOM 9 C CA . ALA 42 42 ? A 319.720 11.183 12.625 1 1 C ALA 0.300 1
ATOM 10 C C . ALA 42 42 ? A 318.925 12.258 11.883 1 1 C ALA 0.300 1
ATOM 11 O O . ALA 42 42 ? A 319.180 13.447 12.006 1 1 C ALA 0.300 1
ATOM 12 C CB . ALA 42 42 ? A 320.262 11.721 13.969 1 1 C ALA 0.300 1
ATOM 13 N N . GLY 43 43 ? A 317.918 11.858 11.086 1 1 C GLY 0.700 1
ATOM 14 C CA . GLY 43 43 ? A 317.217 12.804 10.242 1 1 C GLY 0.700 1
ATOM 15 C C . GLY 43 43 ? A 316.610 12.042 9.115 1 1 C GLY 0.700 1
ATOM 16 O O . GLY 43 43 ? A 317.169 11.022 8.727 1 1 C GLY 0.700 1
ATOM 17 N N . ASP 44 44 ? A 315.454 12.532 8.625 1 1 C ASP 0.690 1
ATOM 18 C CA . ASP 44 44 ? A 314.731 12.097 7.443 1 1 C ASP 0.690 1
ATOM 19 C C . ASP 44 44 ? A 315.520 12.260 6.146 1 1 C ASP 0.690 1
ATOM 20 O O . ASP 44 44 ? A 316.534 12.945 6.084 1 1 C ASP 0.690 1
ATOM 21 C CB . ASP 44 44 ? A 313.410 12.910 7.338 1 1 C ASP 0.690 1
ATOM 22 C CG . ASP 44 44 ? A 312.270 12.042 6.836 1 1 C ASP 0.690 1
ATOM 23 O OD1 . ASP 44 44 ? A 311.809 11.181 7.622 1 1 C ASP 0.690 1
ATOM 24 O OD2 . ASP 44 44 ? A 311.835 12.270 5.680 1 1 C ASP 0.690 1
ATOM 25 N N . GLU 45 45 ? A 315.014 11.661 5.052 1 1 C GLU 0.460 1
ATOM 26 C CA . GLU 45 45 ? A 315.717 11.625 3.792 1 1 C GLU 0.460 1
ATOM 27 C C . GLU 45 45 ? A 314.816 12.118 2.664 1 1 C GLU 0.460 1
ATOM 28 O O . GLU 45 45 ? A 313.895 11.457 2.194 1 1 C GLU 0.460 1
ATOM 29 C CB . GLU 45 45 ? A 316.292 10.213 3.486 1 1 C GLU 0.460 1
ATOM 30 C CG . GLU 45 45 ? A 317.114 9.573 4.645 1 1 C GLU 0.460 1
ATOM 31 C CD . GLU 45 45 ? A 316.339 8.513 5.432 1 1 C GLU 0.460 1
ATOM 32 O OE1 . GLU 45 45 ? A 316.350 7.342 4.967 1 1 C GLU 0.460 1
ATOM 33 O OE2 . GLU 45 45 ? A 315.784 8.841 6.507 1 1 C GLU 0.460 1
ATOM 34 N N . ILE 46 46 ? A 315.099 13.337 2.151 1 1 C ILE 0.610 1
ATOM 35 C CA . ILE 46 46 ? A 314.365 13.906 1.033 1 1 C ILE 0.610 1
ATOM 36 C C . ILE 46 46 ? A 314.942 13.395 -0.272 1 1 C ILE 0.610 1
ATOM 37 O O . ILE 46 46 ? A 316.153 13.242 -0.398 1 1 C ILE 0.610 1
ATOM 38 C CB . ILE 46 46 ? A 314.351 15.435 1.043 1 1 C ILE 0.610 1
ATOM 39 C CG1 . ILE 46 46 ? A 313.409 15.990 -0.057 1 1 C ILE 0.610 1
ATOM 40 C CG2 . ILE 46 46 ? A 315.789 16.010 0.938 1 1 C ILE 0.610 1
ATOM 41 C CD1 . ILE 46 46 ? A 312.971 17.435 0.185 1 1 C ILE 0.610 1
ATOM 42 N N . VAL 47 47 ? A 314.071 13.125 -1.269 1 1 C VAL 0.630 1
ATOM 43 C CA . VAL 47 47 ? A 314.496 12.602 -2.554 1 1 C VAL 0.630 1
ATOM 44 C C . VAL 47 47 ? A 313.345 12.589 -3.559 1 1 C VAL 0.630 1
ATOM 45 O O . VAL 47 47 ? A 313.589 12.900 -4.725 1 1 C VAL 0.630 1
ATOM 46 C CB . VAL 47 47 ? A 315.252 11.263 -2.485 1 1 C VAL 0.630 1
ATOM 47 C CG1 . VAL 47 47 ? A 314.394 10.153 -1.832 1 1 C VAL 0.630 1
ATOM 48 C CG2 . VAL 47 47 ? A 315.901 10.993 -3.866 1 1 C VAL 0.630 1
ATOM 49 N N . ASP 48 48 ? A 312.115 12.173 -3.158 1 1 C ASP 0.630 1
ATOM 50 C CA . ASP 48 48 ? A 310.888 12.113 -3.959 1 1 C ASP 0.630 1
ATOM 51 C C . ASP 48 48 ? A 310.960 11.203 -5.199 1 1 C ASP 0.630 1
ATOM 52 O O . ASP 48 48 ? A 311.469 11.538 -6.258 1 1 C ASP 0.630 1
ATOM 53 C CB . ASP 48 48 ? A 310.137 13.473 -4.148 1 1 C ASP 0.630 1
ATOM 54 C CG . ASP 48 48 ? A 310.849 14.552 -4.961 1 1 C ASP 0.630 1
ATOM 55 O OD1 . ASP 48 48 ? A 311.586 15.350 -4.325 1 1 C ASP 0.630 1
ATOM 56 O OD2 . ASP 48 48 ? A 310.542 14.666 -6.174 1 1 C ASP 0.630 1
ATOM 57 N N . LEU 49 49 ? A 310.480 9.939 -5.104 1 1 C LEU 0.660 1
ATOM 58 C CA . LEU 49 49 ? A 310.734 8.993 -6.182 1 1 C LEU 0.660 1
ATOM 59 C C . LEU 49 49 ? A 309.469 8.907 -7.008 1 1 C LEU 0.660 1
ATOM 60 O O . LEU 49 49 ? A 308.508 9.645 -6.826 1 1 C LEU 0.660 1
ATOM 61 C CB . LEU 49 49 ? A 311.310 7.612 -5.715 1 1 C LEU 0.660 1
ATOM 62 C CG . LEU 49 49 ? A 312.817 7.600 -5.293 1 1 C LEU 0.660 1
ATOM 63 C CD1 . LEU 49 49 ? A 313.775 7.040 -6.357 1 1 C LEU 0.660 1
ATOM 64 C CD2 . LEU 49 49 ? A 313.411 8.953 -4.911 1 1 C LEU 0.660 1
ATOM 65 N N . THR 50 50 ? A 309.480 8.005 -7.999 1 1 C THR 0.660 1
ATOM 66 C CA . THR 50 50 ? A 308.312 7.528 -8.718 1 1 C THR 0.660 1
ATOM 67 C C . THR 50 50 ? A 307.206 6.981 -7.800 1 1 C THR 0.660 1
ATOM 68 O O . THR 50 50 ? A 307.230 7.112 -6.580 1 1 C THR 0.660 1
ATOM 69 C CB . THR 50 50 ? A 308.682 6.523 -9.819 1 1 C THR 0.660 1
ATOM 70 O OG1 . THR 50 50 ? A 309.256 5.335 -9.299 1 1 C THR 0.660 1
ATOM 71 C CG2 . THR 50 50 ? A 309.759 7.111 -10.745 1 1 C THR 0.660 1
ATOM 72 N N . CYS 51 51 ? A 306.151 6.373 -8.370 1 1 C CYS 0.660 1
ATOM 73 C CA . CYS 51 51 ? A 305.172 5.578 -7.641 1 1 C CYS 0.660 1
ATOM 74 C C . CYS 51 51 ? A 305.718 4.503 -6.688 1 1 C CYS 0.660 1
ATOM 75 O O . CYS 51 51 ? A 306.879 4.121 -6.728 1 1 C CYS 0.660 1
ATOM 76 C CB . CYS 51 51 ? A 304.184 4.929 -8.645 1 1 C CYS 0.660 1
ATOM 77 S SG . CYS 51 51 ? A 304.984 3.765 -9.808 1 1 C CYS 0.660 1
ATOM 78 N N . GLU 52 52 ? A 304.843 3.957 -5.822 1 1 C GLU 0.690 1
ATOM 79 C CA . GLU 52 52 ? A 305.223 2.972 -4.830 1 1 C GLU 0.690 1
ATOM 80 C C . GLU 52 52 ? A 304.504 1.643 -5.005 1 1 C GLU 0.690 1
ATOM 81 O O . GLU 52 52 ? A 305.074 0.575 -4.786 1 1 C GLU 0.690 1
ATOM 82 C CB . GLU 52 52 ? A 304.911 3.586 -3.444 1 1 C GLU 0.690 1
ATOM 83 C CG . GLU 52 52 ? A 303.426 3.973 -3.207 1 1 C GLU 0.690 1
ATOM 84 C CD . GLU 52 52 ? A 303.290 5.249 -2.381 1 1 C GLU 0.690 1
ATOM 85 O OE1 . GLU 52 52 ? A 303.335 6.337 -3.011 1 1 C GLU 0.690 1
ATOM 86 O OE2 . GLU 52 52 ? A 303.116 5.141 -1.143 1 1 C GLU 0.690 1
ATOM 87 N N . SER 53 53 ? A 303.244 1.650 -5.462 1 1 C SER 0.750 1
ATOM 88 C CA . SER 53 53 ? A 302.455 0.451 -5.583 1 1 C SER 0.750 1
ATOM 89 C C . SER 53 53 ? A 301.394 0.756 -6.612 1 1 C SER 0.750 1
ATOM 90 O O . SER 53 53 ? A 301.249 1.899 -7.035 1 1 C SER 0.750 1
ATOM 91 C CB . SER 53 53 ? A 301.882 0.014 -4.210 1 1 C SER 0.750 1
ATOM 92 O OG . SER 53 53 ? A 301.054 -1.145 -4.245 1 1 C SER 0.750 1
ATOM 93 N N . LEU 54 54 ? A 300.744 -0.306 -7.115 1 1 C LEU 0.730 1
ATOM 94 C CA . LEU 54 54 ? A 299.829 -0.294 -8.227 1 1 C LEU 0.730 1
ATOM 95 C C . LEU 54 54 ? A 298.794 -1.351 -7.888 1 1 C LEU 0.730 1
ATOM 96 O O . LEU 54 54 ? A 299.144 -2.481 -7.567 1 1 C LEU 0.730 1
ATOM 97 C CB . LEU 54 54 ? A 300.490 -0.707 -9.589 1 1 C LEU 0.730 1
ATOM 98 C CG . LEU 54 54 ? A 301.865 -0.078 -9.933 1 1 C LEU 0.730 1
ATOM 99 C CD1 . LEU 54 54 ? A 303.080 -0.835 -9.357 1 1 C LEU 0.730 1
ATOM 100 C CD2 . LEU 54 54 ? A 302.060 -0.002 -11.454 1 1 C LEU 0.730 1
ATOM 101 N N . GLU 55 55 ? A 297.502 -1.011 -7.977 1 1 C GLU 0.490 1
ATOM 102 C CA . GLU 55 55 ? A 296.394 -1.888 -7.682 1 1 C GLU 0.490 1
ATOM 103 C C . GLU 55 55 ? A 295.682 -2.306 -8.982 1 1 C GLU 0.490 1
ATOM 104 O O . GLU 55 55 ? A 295.068 -1.477 -9.644 1 1 C GLU 0.490 1
ATOM 105 C CB . GLU 55 55 ? A 295.426 -1.190 -6.681 1 1 C GLU 0.490 1
ATOM 106 C CG . GLU 55 55 ? A 295.090 0.298 -6.982 1 1 C GLU 0.490 1
ATOM 107 C CD . GLU 55 55 ? A 296.190 1.249 -6.513 1 1 C GLU 0.490 1
ATOM 108 O OE1 . GLU 55 55 ? A 296.252 1.525 -5.290 1 1 C GLU 0.490 1
ATOM 109 O OE2 . GLU 55 55 ? A 297.000 1.659 -7.385 1 1 C GLU 0.490 1
ATOM 110 N N . PRO 56 56 ? A 295.726 -3.573 -9.431 1 1 C PRO 0.720 1
ATOM 111 C CA . PRO 56 56 ? A 295.079 -3.972 -10.681 1 1 C PRO 0.720 1
ATOM 112 C C . PRO 56 56 ? A 293.567 -4.011 -10.567 1 1 C PRO 0.720 1
ATOM 113 O O . PRO 56 56 ? A 292.866 -3.451 -11.406 1 1 C PRO 0.720 1
ATOM 114 C CB . PRO 56 56 ? A 295.620 -5.394 -10.965 1 1 C PRO 0.720 1
ATOM 115 C CG . PRO 56 56 ? A 296.947 -5.475 -10.204 1 1 C PRO 0.720 1
ATOM 116 C CD . PRO 56 56 ? A 296.746 -4.534 -9.015 1 1 C PRO 0.720 1
ATOM 117 N N . VAL 57 57 ? A 293.058 -4.696 -9.531 1 1 C VAL 0.690 1
ATOM 118 C CA . VAL 57 57 ? A 291.654 -4.844 -9.230 1 1 C VAL 0.690 1
ATOM 119 C C . VAL 57 57 ? A 291.416 -4.229 -7.861 1 1 C VAL 0.690 1
ATOM 120 O O . VAL 57 57 ? A 292.294 -4.207 -7.004 1 1 C VAL 0.690 1
ATOM 121 C CB . VAL 57 57 ? A 291.168 -6.302 -9.275 1 1 C VAL 0.690 1
ATOM 122 C CG1 . VAL 57 57 ? A 291.450 -6.892 -10.675 1 1 C VAL 0.690 1
ATOM 123 C CG2 . VAL 57 57 ? A 291.814 -7.173 -8.173 1 1 C VAL 0.690 1
ATOM 124 N N . VAL 58 58 ? A 290.206 -3.673 -7.655 1 1 C VAL 0.700 1
ATOM 125 C CA . VAL 58 58 ? A 289.771 -3.029 -6.427 1 1 C VAL 0.700 1
ATOM 126 C C . VAL 58 58 ? A 289.053 -4.015 -5.517 1 1 C VAL 0.700 1
ATOM 127 O O . VAL 58 58 ? A 288.739 -5.130 -5.917 1 1 C VAL 0.700 1
ATOM 128 C CB . VAL 58 58 ? A 288.845 -1.846 -6.702 1 1 C VAL 0.700 1
ATOM 129 C CG1 . VAL 58 58 ? A 289.625 -0.779 -7.498 1 1 C VAL 0.700 1
ATOM 130 C CG2 . VAL 58 58 ? A 287.562 -2.307 -7.434 1 1 C VAL 0.700 1
ATOM 131 N N . VAL 59 59 ? A 288.784 -3.604 -4.258 1 1 C VAL 0.390 1
ATOM 132 C CA . VAL 59 59 ? A 288.120 -4.406 -3.245 1 1 C VAL 0.390 1
ATOM 133 C C . VAL 59 59 ? A 287.797 -3.479 -2.075 1 1 C VAL 0.390 1
ATOM 134 O O . VAL 59 59 ? A 288.454 -2.458 -1.909 1 1 C VAL 0.390 1
ATOM 135 C CB . VAL 59 59 ? A 288.972 -5.613 -2.818 1 1 C VAL 0.390 1
ATOM 136 C CG1 . VAL 59 59 ? A 290.350 -5.158 -2.284 1 1 C VAL 0.390 1
ATOM 137 C CG2 . VAL 59 59 ? A 288.226 -6.560 -1.851 1 1 C VAL 0.390 1
ATOM 138 N N . ASP 60 60 ? A 286.755 -3.826 -1.280 1 1 C ASP 0.670 1
ATOM 139 C CA . ASP 60 60 ? A 286.381 -3.211 -0.024 1 1 C ASP 0.670 1
ATOM 140 C C . ASP 60 60 ? A 287.029 -3.946 1.157 1 1 C ASP 0.670 1
ATOM 141 O O . ASP 60 60 ? A 287.979 -4.703 1.015 1 1 C ASP 0.670 1
ATOM 142 C CB . ASP 60 60 ? A 284.833 -3.214 0.106 1 1 C ASP 0.670 1
ATOM 143 C CG . ASP 60 60 ? A 284.383 -1.828 0.518 1 1 C ASP 0.670 1
ATOM 144 O OD1 . ASP 60 60 ? A 284.561 -0.897 -0.305 1 1 C ASP 0.670 1
ATOM 145 O OD2 . ASP 60 60 ? A 283.902 -1.696 1.668 1 1 C ASP 0.670 1
ATOM 146 N N . LEU 61 61 ? A 286.527 -3.695 2.382 1 1 C LEU 0.680 1
ATOM 147 C CA . LEU 61 61 ? A 287.160 -4.112 3.618 1 1 C LEU 0.680 1
ATOM 148 C C . LEU 61 61 ? A 286.161 -4.963 4.379 1 1 C LEU 0.680 1
ATOM 149 O O . LEU 61 61 ? A 285.066 -5.253 3.911 1 1 C LEU 0.680 1
ATOM 150 C CB . LEU 61 61 ? A 287.637 -2.930 4.521 1 1 C LEU 0.680 1
ATOM 151 C CG . LEU 61 61 ? A 288.453 -1.785 3.859 1 1 C LEU 0.680 1
ATOM 152 C CD1 . LEU 61 61 ? A 289.661 -2.285 3.043 1 1 C LEU 0.680 1
ATOM 153 C CD2 . LEU 61 61 ? A 287.583 -0.755 3.108 1 1 C LEU 0.680 1
ATOM 154 N N . THR 62 62 ? A 286.533 -5.435 5.580 1 1 C THR 0.650 1
ATOM 155 C CA . THR 62 62 ? A 285.708 -6.341 6.355 1 1 C THR 0.650 1
ATOM 156 C C . THR 62 62 ? A 285.801 -5.918 7.800 1 1 C THR 0.650 1
ATOM 157 O O . THR 62 62 ? A 286.581 -5.041 8.161 1 1 C THR 0.650 1
ATOM 158 C CB . THR 62 62 ? A 286.078 -7.827 6.203 1 1 C THR 0.650 1
ATOM 159 O OG1 . THR 62 62 ? A 287.452 -8.070 6.466 1 1 C THR 0.650 1
ATOM 160 C CG2 . THR 62 62 ? A 285.827 -8.273 4.755 1 1 C THR 0.650 1
ATOM 161 N N . HIS 63 63 ? A 284.944 -6.511 8.656 1 1 C HIS 0.570 1
ATOM 162 C CA . HIS 63 63 ? A 284.983 -6.355 10.097 1 1 C HIS 0.570 1
ATOM 163 C C . HIS 63 63 ? A 285.896 -7.429 10.662 1 1 C HIS 0.570 1
ATOM 164 O O . HIS 63 63 ? A 287.046 -7.530 10.244 1 1 C HIS 0.570 1
ATOM 165 C CB . HIS 63 63 ? A 283.564 -6.445 10.699 1 1 C HIS 0.570 1
ATOM 166 C CG . HIS 63 63 ? A 282.650 -5.462 10.064 1 1 C HIS 0.570 1
ATOM 167 N ND1 . HIS 63 63 ? A 281.751 -5.895 9.121 1 1 C HIS 0.570 1
ATOM 168 C CD2 . HIS 63 63 ? A 282.541 -4.115 10.254 1 1 C HIS 0.570 1
ATOM 169 C CE1 . HIS 63 63 ? A 281.095 -4.807 8.746 1 1 C HIS 0.570 1
ATOM 170 N NE2 . HIS 63 63 ? A 281.541 -3.716 9.403 1 1 C HIS 0.570 1
ATOM 171 N N . ASN 64 64 ? A 285.409 -8.287 11.594 1 1 C ASN 0.280 1
ATOM 172 C CA . ASN 64 64 ? A 286.235 -9.210 12.370 1 1 C ASN 0.280 1
ATOM 173 C C . ASN 64 64 ? A 287.205 -8.480 13.311 1 1 C ASN 0.280 1
ATOM 174 O O . ASN 64 64 ? A 287.324 -7.258 13.236 1 1 C ASN 0.280 1
ATOM 175 C CB . ASN 64 64 ? A 286.933 -10.296 11.479 1 1 C ASN 0.280 1
ATOM 176 C CG . ASN 64 64 ? A 286.083 -11.548 11.323 1 1 C ASN 0.280 1
ATOM 177 O OD1 . ASN 64 64 ? A 286.427 -12.625 11.828 1 1 C ASN 0.280 1
ATOM 178 N ND2 . ASN 64 64 ? A 284.953 -11.462 10.600 1 1 C ASN 0.280 1
ATOM 179 N N . ASP 65 65 ? A 287.849 -9.232 14.234 1 1 C ASP 0.260 1
ATOM 180 C CA . ASP 65 65 ? A 288.771 -8.703 15.227 1 1 C ASP 0.260 1
ATOM 181 C C . ASP 65 65 ? A 288.057 -7.823 16.323 1 1 C ASP 0.260 1
ATOM 182 O O . ASP 65 65 ? A 286.793 -7.762 16.313 1 1 C ASP 0.260 1
ATOM 183 C CB . ASP 65 65 ? A 290.033 -8.153 14.477 1 1 C ASP 0.260 1
ATOM 184 C CG . ASP 65 65 ? A 291.377 -8.433 15.139 1 1 C ASP 0.260 1
ATOM 185 O OD1 . ASP 65 65 ? A 291.659 -9.635 15.398 1 1 C ASP 0.260 1
ATOM 186 O OD2 . ASP 65 65 ? A 292.191 -7.480 15.270 1 1 C ASP 0.260 1
ATOM 187 O OXT . ASP 65 65 ? A 288.749 -7.293 17.232 1 1 C ASP 0.260 1
#
#
loop_
_atom_type.symbol
C
N
O
S
#
#
loop_
_ma_qa_metric.id
_ma_qa_metric.name
_ma_qa_metric.description
_ma_qa_metric.type
_ma_qa_metric.mode
_ma_qa_metric.type_other_details
_ma_qa_metric.software_group_id
1 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' local . 5
2 QMEANDisCo 'Predicted accuracy according to all-atom lDDT in [0,1].'
'pLDDT all-atom in [0,1]' global . 5
3 GMQE
'Global Model Quality Estimate of the model accuracy, calculated by SWISS-MODEL.'
'normalized score' global . 6
#
#
loop_
_ma_qa_metric_global.ordinal_id
_ma_qa_metric_global.model_id
_ma_qa_metric_global.metric_id
_ma_qa_metric_global.metric_value
1 1 2 0.586
2 1 3 0
#
#
loop_
_ma_qa_metric_local.ordinal_id
_ma_qa_metric_local.model_id
_ma_qa_metric_local.label_asym_id
_ma_qa_metric_local.label_seq_id
_ma_qa_metric_local.label_comp_id
_ma_qa_metric_local.metric_id
_ma_qa_metric_local.metric_value
1 1 A 41 THR 1 0.380
2 1 A 42 ALA 1 0.300
3 1 A 43 GLY 1 0.700
4 1 A 44 ASP 1 0.690
5 1 A 45 GLU 1 0.460
6 1 A 46 ILE 1 0.610
7 1 A 47 VAL 1 0.630
8 1 A 48 ASP 1 0.630
9 1 A 49 LEU 1 0.660
10 1 A 50 THR 1 0.660
11 1 A 51 CYS 1 0.660
12 1 A 52 GLU 1 0.690
13 1 A 53 SER 1 0.750
14 1 A 54 LEU 1 0.730
15 1 A 55 GLU 1 0.490
16 1 A 56 PRO 1 0.720
17 1 A 57 VAL 1 0.690
18 1 A 58 VAL 1 0.700
19 1 A 59 VAL 1 0.390
20 1 A 60 ASP 1 0.670
21 1 A 61 LEU 1 0.680
22 1 A 62 THR 1 0.650
23 1 A 63 HIS 1 0.570
24 1 A 64 ASN 1 0.280
25 1 A 65 ASP 1 0.260
#
#
loop_
_pdbx_data_usage.id
_pdbx_data_usage.type
_pdbx_data_usage.details
_pdbx_data_usage.url
1 license
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